Citrus Sinensis ID: 032818

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEMPQR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERascvtempqr
Flexible Loop (DISEMBL)
mndadvskqIQQMVRFIRQEAEEKANeisvsaeeefnieklqlveAEKKKIRqeyerkekqveiRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKglivqaerascvtempqr
Low Complexity Region (SEG)
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEMPQR
Disordered region (IsUnstruct)
*********************************************************************Y*MQLNASRIKVLQ************************NSYKKLLKGLIVQAE***********
Disordered Region (DISOPRED)
****DVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLV***********************************KVLQAQDDLVSNMMEA************NSYKKLLKGLIVQAERASCVTEMPQR
Disordered Region (DISEMBL)
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEMPQR
Disordered Region (DISPRO)
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTE****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNxxxxxxxxxxxxxxxxxxxxxxxxVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEMPQR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q9MB46	230	V-type proton ATPase subu	N/A	no	0.909	0.526	0.991	1e-61
Q9SWE7	230	V-type proton ATPase subu	N/A	no	0.909	0.526	0.983	2e-60
O23948	237	V-type proton ATPase subu	N/A	no	0.909	0.510	0.876	5e-53
Q41396	229	V-type proton ATPase subu	N/A	no	0.909	0.528	0.826	2e-50
Q40272	226	V-type proton ATPase subu	N/A	no	0.909	0.535	0.834	8e-50
Q39258	230	V-type proton ATPase subu	yes	no	0.909	0.526	0.809	9e-50
P0CAN7	237	V-type proton ATPase subu	no	no	0.909	0.510	0.763	2e-46
Q9C9Z8	235	V-type proton ATPase subu	no	no	0.909	0.514	0.735	4e-46
P11019	226	V-type proton ATPase subu	yes	no	0.909	0.535	0.495	6e-26
Q4R761	226	V-type proton ATPase subu	N/A	no	0.909	0.535	0.495	6e-26

>sp|Q9MB46|VATE_CITUN V-type proton ATPase subunit E OS=Citrus unshiu GN=VATE PE=2 SV=1

 Score =  234 bits (596), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
Citrus unshiu (taxid: 55188)

>sp|Q9SWE7|VATE_CITLI V-type proton ATPase subunit E OS=Citrus limon GN=VATE PE=2 SV=1

 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 119/121 (98%), Positives = 120/121 (99%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLK LIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKDLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Citrus limon (taxid: 2708)

>sp|O23948|VATE_GOSHI V-type proton ATPase subunit E OS=Gossypium hirsutum GN=VATE PE=2 SV=1

 Score =  205 bits (522), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 106/121 (87%), Positives = 115/121 (95%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           M+DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYE+KEK
Sbjct: 1   MSDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDD+V+ M E+ASK+ LNVS DH+ YK+LLK LIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDVVNAMKESASKDFLNVSHDHHVYKRLLKDLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Gossypium hirsutum (taxid: 3635)

>sp|Q41396|VATE_SPIOL V-type proton ATPase subunit E OS=Spinacia oleracea GN=VATE PE=2 SV=1

 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/121 (82%), Positives = 112/121 (92%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MND DV KQIQQMVRFIRQEAEEKANEISV+AEEEFNIEKLQLVEAEKKKIR EYERKEK
Sbjct: 1   MNDTDVQKQIQQMVRFIRQEAEEKANEISVAAEEEFNIEKLQLVEAEKKKIRPEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV++R+KIEYSMQLNASRIKVLQAQDDLV++M E A+KE+L VS DH+ YK+LLK L+VQ
Sbjct: 61  QVQVRRKIEYSMQLNASRIKVLQAQDDLVNSMKEEAAKELLRVSGDHHHYKRLLKELVVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Spinacia oleracea (taxid: 3562)

>sp|Q40272|VATE_MESCR V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum GN=VATE PE=2 SV=1

 Score =  195 bits (495), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 110/121 (90%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MND DV  QIQQMVRF+RQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERK K
Sbjct: 1   MNDTDVQNQIQQMVRFMRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV++R+KIEYSMQLNASRIKVLQAQDDLV+ M EAASKE+L VS DH+ Y+ LLK LIVQ
Sbjct: 61  QVDVRRKIEYSMQLNASRIKVLQAQDDLVNAMKEAASKELLLVSGDHHQYRNLLKELIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Mesembryanthemum crystallinum (taxid: 3544)

>sp|Q39258|VATE1_ARATH V-type proton ATPase subunit E1 OS=Arabidopsis thaliana GN=VHA-E1 PE=1 SV=2

 Score =  194 bits (494), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 112/121 (92%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MND DVS+QIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQ+YE+KEK
Sbjct: 1   MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           Q ++RKKI+YSMQLNASRIKVLQAQDD+V+ M + A+K++LNVSRD  +YK+LLK LIVQ
Sbjct: 61  QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120

Query: 121 A 121
            
Sbjct: 121 C 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. Required for Golgi organization and vacuole function in embryogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CAN7|VATE3_ARATH V-type proton ATPase subunit E3 OS=Arabidopsis thaliana GN=VHA-E3 PE=2 SV=1

 Score =  184 bits (466), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 109/127 (85%), Gaps = 6/127 (4%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDAD S QIQQMVRFIRQEAEEKANEIS+S+EEEFNIEKLQLVEAEKKKIRQEYE+KEK
Sbjct: 1   MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVS------RDHNSYKKLL 114
           QV++RKKI+YSMQLNASRIKVLQAQDD+V+ M E A+K++L VS        H+ YK LL
Sbjct: 61  QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120

Query: 115 KGLIVQA 121
           K LIVQ 
Sbjct: 121 KDLIVQC 127

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C9Z8|VATE2_ARATH V-type proton ATPase subunit E2 OS=Arabidopsis thaliana GN=VHA-E2 PE=2 SV=1

 Score =  182 bits (463), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/121 (73%), Positives = 111/121 (91%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEIS+SAEEEFNIE+LQL+E+ K+K+RQ+Y+RK K
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV+IRK+I+YS QLNASRIK LQAQDD+V+ M ++A+K++L VS D N+YKKLLK LI++
Sbjct: 61  QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Arabidopsis thaliana (taxid: 3702)

>sp|P11019|VATE1_BOVIN V-type proton ATPase subunit E 1 OS=Bos taurus GN=ATP6V1E1 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 89/121 (73%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct: 63  QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

Query: 121 A 121
            
Sbjct: 123 G 123

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Bos taurus (taxid: 9913)

>sp|Q4R761|VATE1_MACFA V-type proton ATPase subunit E 1 OS=Macaca fascicularis GN=ATP6V1E1 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 89/121 (73%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct: 63  QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

Query: 121 A 121
            
Sbjct: 123 G 123

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Macaca fascicularis (taxid: 9541)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
12585474	230	RecName: Full=V-type proton ATPase subun	0.909	0.526	0.991	1e-59
12585492	230	RecName: Full=V-type proton ATPase subun	0.909	0.526	0.983	1e-58
225426050	230	PREDICTED: V-type proton ATPase subunit	0.909	0.526	0.892	5e-53
255537687	230	vacuolar ATP synthase subunit E, putativ	0.909	0.526	0.884	1e-52
192910830	229	vacuolar ATP synthase subunit E [Elaeis	0.909	0.528	0.892	5e-52
324331819	229	vacuolar ATP synthase subunit [Camellia	0.909	0.528	0.876	7e-52
357481501	230	V-type proton ATPase subunit E1 [Medicag	0.909	0.526	0.851	3e-51
217075356	214	unknown [Medicago truncatula]	0.909	0.565	0.851	3e-51
3334405	237	RecName: Full=V-type proton ATPase subun	0.909	0.510	0.876	4e-51
116781853	229	unknown [Picea sitchensis] gi|116783111|	0.909	0.528	0.851	6e-51

>gi|12585474|sp|Q9MB46.1|VATE_CITUN RecName: Full=V-type proton ATPase subunit E; Short=V-ATPase subunit E; AltName: Full=Vacuolar proton pump subunit E gi|6729085|dbj|BAA89661.1| vacuolar H+-ATPase E subunit-1 [Citrus unshiu]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12585492|sp|Q9SWE7.1|VATE_CITLI RecName: Full=V-type proton ATPase subunit E; Short=V-ATPase subunit E; AltName: Full=ClVE-1; AltName: Full=Vacuolar proton pump subunit E gi|5733660|gb|AAD49706.1| vacuolar V-H+ATPase subunit E [Citrus limon]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/121 (98%), Positives = 120/121 (99%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLK LIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKDLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Citrus limon

Species: Citrus limon

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426050|ref|XP_002274995.1| PREDICTED: V-type proton ATPase subunit E [Vitis vinifera] gi|297742293|emb|CBI34442.3| unnamed protein product [Vitis vinifera]

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 108/121 (89%), Positives = 117/121 (96%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV+IRKKIEYSMQLNASRIKVLQAQDDLVS+M EAASKE+L+VS DH+ YK+LL+ L+VQ
Sbjct: 61  QVDIRKKIEYSMQLNASRIKVLQAQDDLVSSMKEAASKELLHVSHDHHVYKRLLRDLVVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537687|ref|XP_002509910.1| vacuolar ATP synthase subunit E, putative [Ricinus communis] gi|223549809|gb|EEF51297.1| vacuolar ATP synthase subunit E, putative [Ricinus communis]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/121 (88%), Positives = 117/121 (96%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKK+RQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKVRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVE+RKKIEYSMQLNASRIKVLQAQDD+V+ M EAA+K++LNVSRDH+ Y+KLLK LIVQ
Sbjct: 61  QVEVRKKIEYSMQLNASRIKVLQAQDDVVNAMKEAATKDLLNVSRDHHVYRKLLKDLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910830|gb|ACF06523.1| vacuolar ATP synthase subunit E [Elaeis guineensis]

 Score =  208 bits (530), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 108/121 (89%), Positives = 116/121 (95%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEK+KIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKRKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIR+KIEYSMQLNASRIKVLQAQDDLV++M EAASKE+L VS D  +YKKLLKGL+VQ
Sbjct: 61  QVEIRRKIEYSMQLNASRIKVLQAQDDLVNSMKEAASKELLRVSNDSKAYKKLLKGLMVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|324331819|gb|ADY38690.1| vacuolar ATP synthase subunit [Camellia sinensis]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 106/121 (87%), Positives = 117/121 (96%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVE+R+KIEYSMQLNASRIKVLQAQDD+V++M +AA+KE+LNVS DH+ Y+KLLK LIVQ
Sbjct: 61  QVEVRRKIEYSMQLNASRIKVLQAQDDVVNSMKDAAAKELLNVSHDHHVYRKLLKELIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481501|ref|XP_003611036.1| V-type proton ATPase subunit E1 [Medicago truncatula] gi|217075250|gb|ACJ85985.1| unknown [Medicago truncatula] gi|355512371|gb|AES93994.1| V-type proton ATPase subunit E1 [Medicago truncatula] gi|388507418|gb|AFK41775.1| unknown [Medicago truncatula]

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 116/121 (95%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEA+KKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV++RKKIEYSMQLNASR+KVLQAQDD+V+ M E+A+KE+LNVSRDH+ YK LLK L++Q
Sbjct: 61  QVDVRKKIEYSMQLNASRLKVLQAQDDVVNKMKESAAKELLNVSRDHHVYKNLLKDLVIQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075356|gb|ACJ86038.1| unknown [Medicago truncatula]

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 116/121 (95%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEA+KKKIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV++RKKIEYSMQLNASR+KVLQAQDD+V+ M E+A+KE+LNVSRDH+ YK LLK L++Q
Sbjct: 61  QVDVRKKIEYSMQLNASRLKVLQAQDDVVNKMKESAAKELLNVSRDHHVYKNLLKDLVIQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334405|sp|O23948.1|VATE_GOSHI RecName: Full=V-type proton ATPase subunit E; Short=V-ATPase subunit E; AltName: Full=Vacuolar proton pump subunit E gi|2267583|gb|AAB72177.1| vacuolar H+-ATPase subunit E [Gossypium hirsutum]

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 106/121 (87%), Positives = 115/121 (95%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           M+DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYE+KEK
Sbjct: 1   MSDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QVEIRKKIEYSMQLNASRIKVLQAQDD+V+ M E+ASK+ LNVS DH+ YK+LLK LIVQ
Sbjct: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDVVNAMKESASKDFLNVSHDHHVYKRLLKDLIVQ 120

Query: 121 A 121
           +
Sbjct: 121 S 121

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116781853|gb|ABK22268.1| unknown [Picea sitchensis] gi|116783111|gb|ABK22797.1| unknown [Picea sitchensis] gi|116786762|gb|ABK24227.1| unknown [Picea sitchensis] gi|224285131|gb|ACN40293.1| unknown [Picea sitchensis] gi|224285269|gb|ACN40360.1| unknown [Picea sitchensis]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 114/121 (94%)

Query: 1   MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
           MNDADVSKQIQQMVRFIRQEAEEKANEI VSAEEEFNIEKLQLVEAEK+KIRQEYERKEK
Sbjct: 1   MNDADVSKQIQQMVRFIRQEAEEKANEIGVSAEEEFNIEKLQLVEAEKRKIRQEYERKEK 60

Query: 61  QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
           QV++RKKIEYSMQLNASRIKVLQAQDDLV++M E+A KE+L +S+DH+ YK+LLK LIVQ
Sbjct: 61  QVDVRKKIEYSMQLNASRIKVLQAQDDLVASMKESAGKEILAISQDHHFYKRLLKDLIVQ 120

Query: 121 A 121
            
Sbjct: 121 G 121

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
TAIR|locus:2136088	230	TUF "AT4G11150" [Arabidopsis t	0.902	0.521	0.816	1.4e-46
TAIR|locus:2024527	237	VHA-E3 "AT1G64200" [Arabidopsi	0.902	0.506	0.769	1e-43
TAIR|locus:2077893	235	VHA-E2 "vacuolar H+-ATPase sub	0.909	0.514	0.735	3.5e-43
ZFIN|ZDB-GENE-020419-11	226	atp6v1e1b "ATPase, H+ transpor	0.902	0.530	0.5	3.1e-28
UNIPROTKB|P11019	226	ATP6V1E1 "V-type proton ATPase	0.902	0.530	0.5	1.7e-27
UNIPROTKB|Q58DR7	202	ATP6V1E1 "ATPase, H+ transport	0.902	0.594	0.5	1.7e-27
UNIPROTKB|E2R1R4	226	ATP6V1E1 "Uncharacterized prot	0.902	0.530	0.5	1.7e-27
UNIPROTKB|P36543	226	ATP6V1E1 "V-type proton ATPase	0.902	0.530	0.5	1.7e-27
UNIPROTKB|Q4R761	226	ATP6V1E1 "V-type proton ATPase	0.902	0.530	0.5	1.7e-27
MGI|MGI:894326	226	Atp6v1e1 "ATPase, H+ transport	0.902	0.530	0.5	1.7e-27

TAIR|locus:2136088 TUF "AT4G11150" [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 98/120 (81%), Positives = 112/120 (93%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             MND DVS+QIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQ+YE+KEK
Sbjct:     1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q ++RKKI+YSMQLNASRIKVLQAQDD+V+ M + A+K++LNVSRD  +YK+LLK LIVQ
Sbjct:    61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120

GO:0005753 "mitochondrial proton-transporting ATP synthase complex" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP;NAS

GO:0015986 "ATP synthesis coupled proton transport" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA;TAS

GO:0009409 "response to cold" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

GO:0007030 "Golgi organization" evidence=RCA;IMP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009832 "plant-type cell wall biogenesis" evidence=IMP

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2024527 VHA-E3 "AT1G64200" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 97/126 (76%), Positives = 110/126 (87%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             MNDAD S QIQQMVRFIRQEAEEKANEIS+S+EEEFNIEKLQLVEAEKKKIRQEYE+KEK
Sbjct:     1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRD------HNSYKKLL 114
             QV++RKKI+YSMQLNASRIKVLQAQDD+V+ M E A+K++L VS+       H+ YK LL
Sbjct:    61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120

Query:   115 KGLIVQ 120
             K LIVQ
Sbjct:   121 KDLIVQ 126

GO:0005753 "mitochondrial proton-transporting ATP synthase complex" evidence=ISS

GO:0015986 "ATP synthesis coupled proton transport" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2077893 VHA-E2 "vacuolar H+-ATPase subunit E isoform 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 89/121 (73%), Positives = 111/121 (91%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             MNDADVSKQIQQMVRFIRQEAEEKANEIS+SAEEEFNIE+LQL+E+ K+K+RQ+Y+RK K
Sbjct:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             QV+IRK+I+YS QLNASRIK LQAQDD+V+ M ++A+K++L VS D N+YKKLLK LI++
Sbjct:    61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120

Query:   121 A 121
             +
Sbjct:   121 S 121

GO:0005634 "nucleus" evidence=ISM

GO:0005753 "mitochondrial proton-transporting ATP synthase complex" evidence=ISS

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=ISS

GO:0015986 "ATP synthesis coupled proton transport" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

ZFIN|ZDB-GENE-020419-11 atp6v1e1b "ATPase, H+ transporting, lysosomal, V1 subunit E isoform 1b" [Danio rerio (taxid:7955)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 60/120 (50%), Positives = 91/120 (75%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DD++++++  A + + NV+RD + Y  L+ GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLKARDDMIADLLNDARQRLANVARDPSRYAALMDGLVLQ 122

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0060041 "retina development in camera-type eye" evidence=IMP

UNIPROTKB|P11019 ATP6V1E1 "V-type proton ATPase subunit E 1" [Bos taurus (taxid:9913)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0016324 "apical plasma membrane" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005768 "endosome" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|Q58DR7 ATP6V1E1 "ATPase, H+ transporting, lysosomal 31kD, V1 subunit E isoform 1" [Bos taurus (taxid:9913)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

UNIPROTKB|E2R1R4 ATP6V1E1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

UNIPROTKB|P36543 ATP6V1E1 "V-type proton ATPase subunit E 1" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005768 "endosome" evidence=ISS

GO:0005829 "cytosol" evidence=ISS;TAS

GO:0016324 "apical plasma membrane" evidence=ISS

GO:0016469 "proton-transporting two-sector ATPase complex" evidence=TAS

GO:0015992 "proton transport" evidence=TAS

GO:0006879 "cellular iron ion homeostasis" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0033572 "transferrin transport" evidence=TAS

GO:0051701 "interaction with host" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0090382 "phagosome maturation" evidence=TAS

UNIPROTKB|Q4R761 ATP6V1E1 "V-type proton ATPase subunit E 1" [Macaca fascicularis (taxid:9541)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0005768 "endosome" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0016324 "apical plasma membrane" evidence=ISS

MGI|MGI:894326 Atp6v1e1 "ATPase, H+ transporting, lysosomal V1 subunit E1" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/120 (50%), Positives = 89/120 (74%)

Query:     1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
             ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEK
Sbjct:     3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62

Query:    61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
             Q+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q
Sbjct:    63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IGI

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IGI

GO:0015992 "proton transport" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0033178 "proton-transporting two-sector ATPase complex, catalytic domain" evidence=IEA

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39258	VATE1_ARATH	No assigned EC number	0.8099	0.9097	0.5260	yes	no
Q9SWE7	VATE_CITLI	No assigned EC number	0.9834	0.9097	0.5260	N/A	no
Q9MB46	VATE_CITUN	No assigned EC number	0.9917	0.9097	0.5260	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00002474001	SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (230 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029599001	SubName- Full=Chromosome chr9 scaffold_49, whole genome shotgun sequence; (849 aa)						•			0.899
	GSVIVG00026188001	SubName- Full=Putative uncharacterized protein (Chromosome chr15 scaffold_37, whole genome shot [...] (222 aa)						•			0.899
	GSVIVG00024902001	SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (232 aa)						•			0.899
	GSVIVG00022618001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (606 aa)						•			0.899
	GSVIVG00013522001	SubName- Full=Chromosome undetermined scaffold_495, whole genome shotgun sequence; (285 aa)						•			0.899
	VPP	SubName- Full=Chromosome chr11 scaffold_170, whole genome shotgun sequence; (764 aa)						•			0.899
	GSVIVG00003295001	SubName- Full=Chromosome undetermined scaffold_141, whole genome shotgun sequence; (767 aa)						•			0.899
	GSVIVG00000475001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (214 aa)						•			0.899
	GSVIVG00018828001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (261 aa)	•			•	•	•	•		0.768
	GSVIVG00015498001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (509 aa)	•			•	•	•	•		0.643

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	133
pfam01991	195	pfam01991, vATP-synt_E, ATP synthase (E/31 kDa) su	8e-31
COG1390	194	COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase su	1e-07

>gnl|CDD|216833 pfam01991, vATP-synt_E, ATP synthase (E/31 kDa) subunit

 Score =  108 bits (272), Expect = 8e-31
 Identities = 56/106 (52%), Positives = 74/106 (69%)

Query: 16  FIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLN 75
           FIRQEAEEKA EI   AEEEF IEK + VE  +KKI + YE+KEKQ E+ K+I  S   N
Sbjct: 1   FIRQEAEEKAEEIRAEAEEEFEIEKAEAVEEAEKKIEEIYEKKEKQAEMEKQIIISNAKN 60

Query: 76  ASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA 121
            +R+KVL A+++L+ ++ E A + + N+S D + YK LLK LI QA
Sbjct: 61  EARLKVLNAREELLDSVFEEAKERLANLSEDKDEYKDLLKDLIKQA 106

This family includes the vacuolar ATP synthase E subunit, as well as the archaebacterial ATP synthase E subunit. Length = 195

>gnl|CDD|224308 COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion]

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 29/115 (25%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 10  IQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIE 69
           ++++++ I +EAEE+A EI   A EE    K +     ++ I +   + EK+ E  ++  
Sbjct: 4   LEKLIKKILREAEEEAEEILEEAREEAEKIKEEAKREAEEAIEEILRKAEKEAERERQRI 63

Query: 70  YSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERA 124
            S  L  +R K+L+A+++++ ++ EA  +++ N++ D     + L+ L+++A   
Sbjct: 64  ISSALLEARRKLLEAKEEILESVFEAVEEKLRNIASD--PEYESLQELLIEALEK 116

Length = 194

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG1664	220	consensus Vacuolar H+-ATPase V1 sector, subunit E	100.0
PF01991	198	vATP-synt_E: ATP synthase (E/31 kDa) subunit; Inte	99.67
COG1390	194	NtpE Archaeal/vacuolar-type H+-ATPase subunit E [E	99.58
PRK03963	198	V-type ATP synthase subunit E; Provisional	99.44
PRK01194	185	V-type ATP synthase subunit E; Provisional	99.34
PRK02292	188	V-type ATP synthase subunit E; Provisional	99.05
PRK01558	198	V-type ATP synthase subunit E; Provisional	98.02
PRK01005	207	V-type ATP synthase subunit E; Provisional	97.6
PRK08475	167	F0F1 ATP synthase subunit B; Validated	95.4
PF06188	191	HrpE: HrpE/YscL/FliH and V-type ATPase subunit E;	94.11
TIGR02499	166	HrpE_YscL_not type III secretion apparatus protein	85.11
TIGR03321	246	alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B.	82.04
PRK01194	185	V-type ATP synthase subunit E; Provisional	82.04

>KOG1664 consensus Vacuolar H+-ATPase V1 sector, subunit E [Energy production and conversion]

Probab=100.00  E-value=1.9e-49  Score=315.05  Aligned_cols=131  Identities=56%  Similarity=0.747  Sum_probs=129.5

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHH
Q 032818            1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIK   80 (133)
Q Consensus         1 m~d~~v~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLk   80 (133)
                      |||++|++||+||++||+|||+|||+||+++|+|||||||++||++++.+|+++|++|+||++++++|+.||++|++||+
T Consensus         1 lsD~dv~kqi~~M~aFI~qEA~EKA~EI~~kAeeEfnIEK~rlV~~q~~kI~~~yekKeKqve~~kkI~~S~~lN~~RlK   80 (220)
T KOG1664|consen    1 LSDADVSKQIKHMVAFIRQEAEEKAKEIDAKAEEEFNIEKGRLVQEQRLKIMQYYEKKEKQVELQKKIAKSNLLNQSRLK   80 (220)
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCCC
Q 032818           81 VLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEMP  131 (133)
Q Consensus        81 vL~ar~~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~~  131 (133)
                      +|++|+++|+++|++|+++|.+++.|++.|+.+|++||+|||++|.+|.|-
T Consensus        81 vL~ar~d~i~~i~~ea~k~Ls~i~~~~~~Y~~lL~~LivQ~Ll~L~Ep~~I  131 (220)
T KOG1664|consen   81 VLRARDDIIDDILDEAKKRLSKVSKDTDRYKKLLKDLIVQGLLQLLEPEVI  131 (220)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHhCCCeeE
Confidence            999999999999999999999999999999999999999999999999873

>PF01991 vATP-synt_E: ATP synthase (E/31 kDa) subunit; InterPro: IPR002842 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.67  E-value=5.6e-15  Score=112.79  Aligned_cols=115  Identities=31%  Similarity=0.384  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Q 032818           16 FIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEA   95 (133)
Q Consensus        16 FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l~~l~~e   95 (133)
                      ||.+||+.+|++|...|.++++-.+..........+...+++..++++..+..+.|...+.+|..+|.+|+++++++|++
T Consensus         1 ~I~~eA~~ka~~I~~eA~~e~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~r~~~l~~k~~~i~~v~~~   80 (198)
T PF01991_consen    1 EIEEEAQEKAEEIIAEAQEEAEKILEEAEEEAEKEIEEIIEKAEKEAEQEKEREISKAELEARRELLEAKQEIIDEVFEE   80 (198)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           96 ASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        96 a~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      ++.+|..++.+++.|+.+|.+||.+++-.+.++++
T Consensus        81 ~~~~L~~~~~~~~~Y~~~L~~li~~~~~~~~~~~~  115 (198)
T PF01991_consen   81 VKEKLKSFSKDPDDYKKFLKKLIEEAAEKLGEGEV  115 (198)
T ss_dssp             HHHHHHCTTCCC-THHHHHHHHHHHHHHCCTTSCE
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCce
Confidence            99999999999877999999999999988876543

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit E from the V1 and A1 complexes of V- and A-ATPases, respectively. Subunit E appears to form a tight interaction with subunit G in the F0 complex, which together may act as stators to prevent certain subunits from rotating with the central rotary element, much in the same way as the F0 complex subunit B does in F-ATPases []. In addition to its key role in stator structure, subunit E appears to have a role in mediating interactions with putative regulatory subunits []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 3LG8_A 2KK7_A 4DT0_A 2DM9_A 2DMA_A 3V6I_A 3K5B_A 3J0J_L 2KZ9_A.

>COG1390 NtpE Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion]

Probab=99.58  E-value=1.7e-13  Score=108.42  Aligned_cols=120  Identities=26%  Similarity=0.379  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHH
Q 032818            9 QIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDL   88 (133)
Q Consensus         9 qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~   88 (133)
                      .+..|++||.++|.++|++|...|.++++..+...+......++..+.+.+++++..++...|+..+++|..+|.++.++
T Consensus         3 ~~e~~i~~I~~~a~eeak~I~~eA~~eae~i~~ea~~~~~~~~~~~~~~~~~ea~~~~~~iis~A~le~r~~~Le~~ee~   82 (194)
T COG1390           3 ELEKLIKKILREAEEEAEEILEEAREEAEKIKEEAKREAEEAIEEILRKAEKEAERERQRIISSALLEARRKLLEAKEEI   82 (194)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           89 VSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        89 l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      |+++++.+.++|..+..+|. |.. |..|+.+++.++.++++
T Consensus        83 l~~~~~~~~e~L~~i~~~~~-~~~-l~~ll~~~~~~~~~~~~  122 (194)
T COG1390          83 LESVFEAVEEKLRNIASDPE-YES-LQELLIEALEKLLGGEL  122 (194)
T ss_pred             HHHHHHHHHHHHHcCcCCcc-hHH-HHHHHHHHHHhcCCCCe
Confidence            99999999999999999987 444 99999999999998875

>PRK03963 V-type ATP synthase subunit E; Provisional

Probab=99.44  E-value=1.5e-11  Score=95.26  Aligned_cols=119  Identities=23%  Similarity=0.243  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Q 032818           10 IQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLV   89 (133)
Q Consensus        10 i~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l   89 (133)
                      +..++.=|..+|+.++++|-..|..+.+-........-.......-++-...++..++...|+..++.|.++|.+|++++
T Consensus         4 l~~i~~~il~~A~~ea~~il~~A~~~a~~i~~~a~~~a~~~~~~i~~~a~~~ae~ek~r~~s~a~~e~r~~~l~ar~el~   83 (198)
T PRK03963          4 AELIIQEINREAEQKIEYILEEAQKEAEKIKEEARKRAESKAEWILRKAKTQAELEKQRIIANAKLEVRRKRLAVQEELI   83 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56788889999999999999999888766666555555555555556666788888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           90 SNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        90 ~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      +++|++|.++|..++.+  .|+.+|.+||.+|+..|.++++
T Consensus        84 ~~v~~~a~~~l~~~~~~--~Y~~~l~~li~~a~~~l~~~~i  122 (198)
T PRK03963         84 SEVLEAVRERLAELPED--EYFETLKALTKEAVEELGEDKV  122 (198)
T ss_pred             HHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHHHHhCCCcE
Confidence            99999999999998876  7999999999999999876654

>PRK01194 V-type ATP synthase subunit E; Provisional

Probab=99.34  E-value=1.3e-10  Score=90.78  Aligned_cols=118  Identities=16%  Similarity=0.280  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHhHhhhHHHHHHHHHHHHH
Q 032818           10 IQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK-QVEIRKKIEYSMQLNASRIKVLQAQDDL   88 (133)
Q Consensus        10 i~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~K-q~e~~kkI~~S~~~N~~RLkvL~ar~~~   88 (133)
                      +..++.=|..+|+.+|++|-..|..+.+- =..-...+-.++...|..+.+ +++..++-..|+.-=.+|+++|.+|+++
T Consensus         3 le~i~~~I~~ea~~~a~~I~~eA~~~aee-i~~ea~~~a~~~~~~~~~k~~~e~~~~~~riis~A~Le~R~~~L~aree~   81 (185)
T PRK01194          3 LEDVIKDIEKSREEKKKEINDEYSKRIEK-LEKECDSKIQSIKEYYEKKMRAEISRLKKSIIDKANIEARSIKREKRREI   81 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            34566667777777777777777766432 222233344445555555543 2333333333555557899999999999


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           89 VSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        89 l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      |+++|+.|.++|..+++++ .|+.+|.+||++|++. ++|++
T Consensus        82 I~~v~~~a~e~L~~l~~~~-~Y~~~L~~LI~~a~~~-l~~~~  121 (185)
T PRK01194         82 LKDYLDIAYEHLMNITKSK-EYDSILNKMIEVAIKT-LGEDC  121 (185)
T ss_pred             HHHHHHHHHHHHHcccCCc-hHHHHHHHHHHHHHHh-cCCCe
Confidence            9999999999999999876 7999999999999999 55543

>PRK02292 V-type ATP synthase subunit E; Provisional

Probab=99.05  E-value=2.3e-08  Score=77.21  Aligned_cols=106  Identities=24%  Similarity=0.366  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHH---HHHHHHHH-HhhHHHHHHHHHhHhhhHHHHHHHHHH
Q 032818           10 IQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKK---IRQEYERK-EKQVEIRKKIEYSMQLNASRIKVLQAQ   85 (133)
Q Consensus        10 i~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~k---I~~~yekK-~Kq~e~~kkI~~S~~~N~~RLkvL~ar   85 (133)
                      +...+.=|.++|+..+++|...|+.+-.-    ++......   |...+..+ .+....-.+.+.|...|.+|..+|.+|
T Consensus         3 l~~i~~~I~~~a~~e~~~I~~ea~~~~~~----i~~ea~~~a~~i~~~~~~~a~~e~~~~~~r~~s~a~~~~rr~~L~~r   78 (188)
T PRK02292          3 LETVVEDIRDEARARASEIRAEADEEAEE----IIAEAEADAEEILEDREAEAEREIEQLREQELSSAKLEAKRERLNAR   78 (188)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667778899999999999988877543    44443333   44444333 334444555789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHH
Q 032818           86 DDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA  121 (133)
Q Consensus        86 ~~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qg  121 (133)
                      +.+|+++|+.|+.+|..++.+  .|..+|.+||.+|
T Consensus        79 ~~~l~~v~~~a~~kL~~~~~~--~y~~~l~~li~~~  112 (188)
T PRK02292         79 KEVLEDVRNQVEDEIASLDGD--KREELTKSLLDAA  112 (188)
T ss_pred             HHHHHHHHHHHHHHHHhcchh--hHHHHHHHHHHhc
Confidence            999999999999999998875  7999999999998

>PRK01558 V-type ATP synthase subunit E; Provisional

Probab=98.02  E-value=0.0011  Score=52.28  Aligned_cols=114  Identities=22%  Similarity=0.230  Sum_probs=93.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHH
Q 032818            3 DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVL   82 (133)
Q Consensus         3 d~~v~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL   82 (133)
                      +.+++.=+.+|..=|..+|+.+|.+|-..|.++-    ..|+..-...-..-.++=.++++.-+++..|......|-.+|
T Consensus         2 ~~~~~~l~dki~~~~~eeA~~eA~~Ii~eA~~eA----e~Ii~eA~~eAe~i~~kAe~ea~~~~~~~~saa~l~~r~~ll   77 (198)
T PRK01558          2 QFEVKDLINKIKKDGLEEAERLANEIILEAKEEA----EEIIAKAEEEAKELKAKAEKEANDYKRHALEASRQAGRDLLI   77 (198)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678888999999999999999999999998864    448877777777777777888888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHH
Q 032818           83 QAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA  121 (133)
Q Consensus        83 ~ar~~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qg  121 (133)
                      .++..+++.+.+.+...+.... |++.|..++..|+...
T Consensus        78 ~~k~~i~~~~~~~~~~~~~~~~-~~e~~~~li~~ll~~~  115 (198)
T PRK01558         78 SFEKSIKSLFKAALKDEVAEVY-DSNFLRELIIRVVDSW  115 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHh
Confidence            9999999866555555445444 8889999999998765

>PRK01005 V-type ATP synthase subunit E; Provisional

Probab=97.60  E-value=0.013  Score=46.95  Aligned_cols=110  Identities=15%  Similarity=0.181  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHH
Q 032818            3 DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVL   82 (133)
Q Consensus         3 d~~v~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL   82 (133)
                      ++.++.=+.+|..-|..+|+.+|.+|-..|..+=+    .|+.+-+......-+.=.++++..++-..|+.-=..|-.+|
T Consensus         7 ~~k~q~L~dki~~eiL~eA~~eA~~Il~eAk~~Ae----~Ii~eA~~EAe~ii~~A~~eae~ek~r~~s~a~l~~R~~~l   82 (207)
T PRK01005          7 QDKLKQICDALREETLKPAEEEAGAIVHNAKEQAK----RIIAEAQEEAEKIIRSAEETADQKLKQGESALVQAGKRSLE   82 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35567778888899999999999999999988764    48888777777777777778888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHh-hccChhHHHHHHHHHHHH
Q 032818           83 QAQDDLVSNMMEAASKEVLN-VSRDHNSYKKLLKGLIVQ  120 (133)
Q Consensus        83 ~ar~~~l~~l~~ea~~kL~~-~~~d~~~Y~~lL~~LI~Q  120 (133)
                      .++.++++.+|..+.++|.. ...||+    +|..||+.
T Consensus        83 ~aKqevi~~vf~~a~~~lv~~~~~d~~----~l~~lI~~  117 (207)
T PRK01005         83 SLKQAVENKIFRESLGEWLEHVLTDPE----VSAKLIQA  117 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHH----HHHHHHHH
Confidence            99999999999999999987 445654    66666654

>PRK08475 F0F1 ATP synthase subunit B; Validated

Probab=95.40  E-value=0.65  Score=35.60  Aligned_cols=86  Identities=19%  Similarity=0.207  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Q 032818           14 VRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMM   93 (133)
Q Consensus        14 ~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l~~l~   93 (133)
                      ..-+..+|+.+|.+|-..|..+-+.++..++.+-+......-++-...           +-+..+--+...|.++++++|
T Consensus        79 ~e~~L~~Ar~eA~~Ii~~A~~eAe~~~~~ii~~A~~ea~~~~~~a~~~-----------ie~Ek~~a~~elk~eii~~~~  147 (167)
T PRK08475         79 ALKKLEEAKEKAELIVETAKKEAYILTQKIEKQTKDDIENLIKSFEEL-----------MEFEVRKMEREVVEEVLNELF  147 (167)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence            345667888899999999999988888888777776666555554444           444455567888999999999


Q ss_pred             HHHHHHHHhhccChhHHHHHHH
Q 032818           94 EAASKEVLNVSRDHNSYKKLLK  115 (133)
Q Consensus        94 ~ea~~kL~~~~~d~~~Y~~lL~  115 (133)
                      +.   +|.++  |++.|-.++.
T Consensus       148 ~~---~~~~l--~~~~y~~~~~  164 (167)
T PRK08475        148 ES---KKVSL--NQQEYVNILL  164 (167)
T ss_pred             Hh---hhcCC--CHHHHHHHHh
Confidence            99   55444  5667887764

>PF06188 HrpE: HrpE/YscL/FliH and V-type ATPase subunit E; InterPro: IPR009335 This family consists of several bacterial HrpE proteins, which are believed to function on the type III secretion system, specifically the secretion of HrpZ (harpinPss) []

Probab=94.11  E-value=2.3  Score=33.47  Aligned_cols=95  Identities=21%  Similarity=0.333  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Q 032818           14 VRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMM   93 (133)
Q Consensus        14 ~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l~~l~   93 (133)
                      ..=|...|+.+|+.|-..|++++..    ++.+....+...|-......-.        ..-..|-.+...-.+.+..++
T Consensus        32 a~~IL~~A~~qA~~Il~~Ae~eAe~----l~~~a~e~a~~~~~q~a~~ll~--------~~~~~~e~l~~~l~~~~~~ll   99 (191)
T PF06188_consen   32 AREILEDARQQAEQILQQAEEEAEA----LLEQAYEQAEAQFWQQANALLQ--------EWQQQREQLLQQLEEQAEELL   99 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence            3678899999999999999999876    6666666666666544332211        111334556666677888899


Q ss_pred             HHHHHHHHhhccChhHHHHHHHHHHHH
Q 032818           94 EAASKEVLNVSRDHNSYKKLLKGLIVQ  120 (133)
Q Consensus        94 ~ea~~kL~~~~~d~~~Y~~lL~~LI~Q  120 (133)
                      ..|-.+|.+-..++.++..++..|..+
T Consensus       100 ~~al~~lL~e~~~~qrv~aLlr~l~~~  126 (191)
T PF06188_consen  100 SQALERLLDETPDQQRVAALLRQLLAS  126 (191)
T ss_pred             HHHHHHHHHcCCchHHHHHHHHHHHHh
Confidence            999999998888888899888888643

This family also includes V-type proton ATPase subunit E proteins. This subunit appears to form a tight interaction with subunit G in the F0 complex. Subunits E and G may act together as stators to prevent certain subunits from rotating with the central rotary element []. PF01991 from PFAM also contains V-type ATPase subunit E proteins. There is an evolutionary link between type III secretion systems and membrane-associated proton translocating ATPases [].

>TIGR02499 HrpE_YscL_not type III secretion apparatus protein, HrpE/YscL family

Probab=85.11  E-value=13  Score=27.37  Aligned_cols=98  Identities=18%  Similarity=0.138  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Q 032818           14 VRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMM   93 (133)
Q Consensus        14 ~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l~~l~   93 (133)
                      -.=|..+|+.+|+.|-..|.++++-.+..-.++....-..+.....-.....            +-+.+..=..-+-.+.
T Consensus        15 A~~il~~A~~~a~~i~~~A~~~~e~~~~~g~~~G~~~g~~e~~~~~~~~~~~------------~~~~~~~~e~~l~~l~   82 (166)
T TIGR02499        15 AQAILAAARQRAEAILADAEEEAEASRQLGYEQGLEQFWQEAAAQLAEWQQE------------AEQLEASLEERLAELV   82 (166)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
Confidence            3457789999999999999999988777766666555544444333221111            1111111122222333


Q ss_pred             HHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcc
Q 032818           94 EAASKEVLNVSRDHNSYKKLLKGLIVQAERASCV  127 (133)
Q Consensus        94 ~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~  127 (133)
                      -.+-.++..-.    ..+.++..++.+++-.+.+
T Consensus        83 ~~~~~kil~~~----~~~e~l~~lv~~al~~~~~  112 (166)
T TIGR02499        83 LQALEQILGEY----DEPERLVRLLRQLLRAVAN  112 (166)
T ss_pred             HHHHHHHhCCC----CCHHHHHHHHHHHHHhCCC
Confidence            33333333332    2456777777777777665

This model is related to Pfam model pfam06188, but is broader. pfam06188 describes HrpE-like proteins, components of bacterial type III secretion systems primarily in bacteria that infect plants. This model includes also the homologous proteins of animal pathogens, such as YscL of Yersinia pestis. This model excludes the related protein FliH of the bacterial flagellar apparatus (see pfam02108)

>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B

Probab=82.04  E-value=25  Score=28.31  Aligned_cols=90  Identities=11%  Similarity=0.211  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Q 032818           17 IRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAA   96 (133)
Q Consensus        17 I~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar~~~l~~l~~ea   96 (133)
                      ...+|+..+.+|-..|..+-.-++..++.+-+..+....+.-...++.++.-...           ..|.++.+-.+.-|
T Consensus        65 ~l~~a~~ea~~i~~~A~~eA~~~~~~i~~~A~~ea~~~~~~a~~~ie~E~~~a~~-----------~l~~ei~~la~~~A  133 (246)
T TIGR03321        65 KNEELDQQREVLLTKAKEEAQAERQRLLDEAREEADEIREKWQEALRREQAALSD-----------ELRRRTGAEVFAIA  133 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH
Confidence            4557888888888888888888888888888888887777777777666555433           33556666667777


Q ss_pred             HHHHHhhccChhHHHHHHHHHH
Q 032818           97 SKEVLNVSRDHNSYKKLLKGLI  118 (133)
Q Consensus        97 ~~kL~~~~~d~~~Y~~lL~~LI  118 (133)
                      .+-|.+.. |++..+.++...|
T Consensus       134 ~kil~~~~-d~~~~~~lid~~i  154 (246)
T TIGR03321       134 RKVLTDLA-DTDLEERMVDVFV  154 (246)
T ss_pred             HHHHHHhc-ChHHHHHHHHHHH
Confidence            77666654 4455666666555

CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.

>PRK01194 V-type ATP synthase subunit E; Provisional

Probab=82.04  E-value=22  Score=27.68  Aligned_cols=94  Identities=13%  Similarity=0.154  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH--------hHhhhHHH
Q 032818            7 SKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEY--------SMQLNASR   78 (133)
Q Consensus         7 ~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~--------S~~~N~~R   78 (133)
                      .+.-+.=..-|..+|+.+|++|...|+++.+-.+..+...-...+...+++-...+.+..|-..        ..+.+.++
T Consensus        11 ~~ea~~~a~~I~~eA~~~aeei~~ea~~~a~~~~~~~~~k~~~e~~~~~~riis~A~Le~R~~~L~aree~I~~v~~~a~   90 (185)
T PRK01194         11 EKSREEKKKEINDEYSKRIEKLEKECDSKIQSIKEYYEKKMRAEISRLKKSIIDKANIEARSIKREKRREILKDYLDIAY   90 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444556778999999999999999999999999999998888888888888887777655432        22344444


Q ss_pred             HHH--HH---HHHHHHHHHHHHHHHHH
Q 032818           79 IKV--LQ---AQDDLVSNMMEAASKEV  100 (133)
Q Consensus        79 Lkv--L~---ar~~~l~~l~~ea~~kL  100 (133)
                      -++  |.   ...++|..|+..+-..|
T Consensus        91 e~L~~l~~~~~Y~~~L~~LI~~a~~~l  117 (185)
T PRK01194         91 EHLMNITKSKEYDSILNKMIEVAIKTL  117 (185)
T ss_pred             HHHHcccCCchHHHHHHHHHHHHHHhc
Confidence            444  32   34566677777665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	133
4dl0_J	233	Crystal Structure Of The Heterotrimeric Egchead Per		5e-12
2kz9_A	69	Structure Of E1-69 Of Yeast V-Atpase Length = 69		1e-04

>pdb|4DL0|J Chain J, Crystal Structure Of The Heterotrimeric Egchead Peripheral Stalk Complex Of The Yeast Vacuolar Atpase Length = 233

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 70/116 (60%)
Query: 6   VSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIR 65
           V+ ++ +M  FIR+EAEEKA EI + A++E+ IEK  +V  E   I   ++ K K+  + 
Sbjct: 13  VNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKAMLS 72
Query: 66  KKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA 121
           ++I  S   N  R+KVL A++  +  + E   +++  ++ + + YK +L+ LIV+A
Sbjct: 73  QQITKSTIANKMRLKVLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVEA 128

>pdb|2KZ9|A Chain A, Structure Of E1-69 Of Yeast V-Atpase Length = 69

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 6  VSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQV 62
          V+ ++ +M  FIR+EAEEKA EI + A++E+ IEK  +V  E   I   ++ K K+ 
Sbjct: 13 VNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKA 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	133
2kz9_A	69	V-type proton ATPase subunit E; V-ATPase, proton t	7e-18
2dm9_A	198	V-type ATP synthase subunit E; A-ATPase, structura	3e-16
3v6i_A	187	V-type ATP synthase subunit E; peripheral stator s	6e-11

>2kz9_A V-type proton ATPase subunit E; V-ATPase, proton transport; NMR {Saccharomyces cerevisiae} Length = 69

 Score = 71.4 bits (175), Expect = 7e-18
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 1  MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
          +    V+ ++ +M  FIR+EAEEKA EI + A++E+ IEK  +V  E   I   ++ K K
Sbjct: 8  LTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLK 67

Query: 61 Q 61
          +
Sbjct: 68 K 68

>2dm9_A V-type ATP synthase subunit E; A-ATPase, structural genomics, NPPSFA, national project on P structural and functional analyses; 1.85A {Pyrococcus horikoshii} SCOP: d.81.4.1 PDB: 2dma_A 4dt0_A Length = 198

 Score = 70.4 bits (172), Expect = 3e-16
 Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 2/113 (1%)

Query: 9   QIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKI 68
             + +++ I +EAE K   I   A ++    K +     + K      R + Q E+ K+ 
Sbjct: 3   GAELIIQEINKEAERKIEYILNEARQQAEKIKEEARRNAEAKAEWIIRRAKTQAELEKQR 62

Query: 69  EYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA 121
             +      R K L  Q++++S+++E   + +  +S D   Y + +K L+ +A
Sbjct: 63  IIANARLEVRRKRLAIQEEIISSVLEEVKRRLETMSED--EYFESVKALLKEA 113

>3v6i_A V-type ATP synthase subunit E; peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_E 3j0j_J Length = 187

 Score = 56.1 bits (135), Expect = 6e-11
 Identities = 19/119 (15%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 3   DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQV 62
           +A +S++++  ++ + QEAE KA  +   AEE+       L++A ++ +  +Y    ++ 
Sbjct: 4   EAILSQEVEAEIQALLQEAEAKAEAVKREAEEKAK----ALLQARERALEAQYRAALRRA 59

Query: 63  EIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQA 121
           E   ++              QA+ +++  +     + +  + +    + ++++ L ++A
Sbjct: 60  ESAGELL-------VATARTQARGEVLEEVRRRVREALEALPQKPE-WPEVVRKLALEA 110

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
4efa_E	233	V-type proton ATPase subunit E; heterotrimer, peri	100.0
3v6i_A	187	V-type ATP synthase subunit E; peripheral stator s	99.49
2dm9_A	198	V-type ATP synthase subunit E; A-ATPase, structura	99.45

>4efa_E V-type proton ATPase subunit E; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_J 2kz9_A

Probab=100.00  E-value=4.6e-38  Score=248.84  Aligned_cols=130  Identities=30%  Similarity=0.498  Sum_probs=128.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHH
Q 032818            1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIK   80 (133)
Q Consensus         1 m~d~~v~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLk   80 (133)
                      |||+||++||++|++||.+||++||+||..+|++||++||+++|++++.+|+..|++++++++++++|+.|+..|++|++
T Consensus         8 l~~~~v~~~i~~m~~fI~qEA~eKA~EI~~kAeeE~~~ek~~~v~~~~~~i~~~~ek~~kq~e~~~~i~~S~~~~~aR~~   87 (233)
T 4efa_E            8 LTPNQVNDELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKAMLSQQITKSTIANKMRLK   87 (233)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           81 VLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        81 vL~ar~~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      +|.+|+++|+++|++|+++|..+++|+..|+.+|.+||+||+++|.+|+|
T Consensus        88 vL~ar~e~i~~v~~~a~~~L~~~~~d~~~Y~~lL~~Li~eal~~l~e~~v  137 (233)
T 4efa_E           88 VLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVEALLKLLEPKA  137 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHCCSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhcCCCcE
Confidence            99999999999999999999999999999999999999999999999875

>3v6i_A V-type ATP synthase subunit E; peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_E 3j0j_J

Probab=99.49  E-value=2.7e-12  Score=97.92  Aligned_cols=114  Identities=12%  Similarity=0.144  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH----HHHHHHHhHhhhHHHHHHHHHHHH
Q 032818           12 QMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVE----IRKKIEYSMQLNASRIKVLQAQDD   87 (133)
Q Consensus        12 ~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e----~~kkI~~S~~~N~~RLkvL~ar~~   87 (133)
                      +..+-|+.||+.+|++|-..|.++-    ..|+.+.+.+....++...+.++    .......|+..+..|.++|.+|++
T Consensus         2 ~~~~~l~~eA~~~a~~I~~eA~~~a----~~I~~eA~~eA~~~~~~~~~~~e~e~~~~~~r~~s~a~le~r~~~L~ar~e   77 (187)
T 3v6i_A            2 KLEAILSQEVEAEIQALLQEAEAKA----EAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGE   77 (187)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556788888888888888877653    44777777666666666555443    445667999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           88 LVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        88 ~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      +++++|++|+++|..+++| ..|+.+|.+||.||+..|.+|++
T Consensus        78 li~~v~~~a~~~L~~~~~~-~~Y~~~L~~Li~ea~~~l~~~~~  119 (187)
T 3v6i_A           78 VLEEVRRRVREALEALPQK-PEWPEVVRKLALEALEALPGAKA  119 (187)
T ss_dssp             HHHHHHHHHHHHHHHGGGS-TTHHHHHHHHHHHHHHHCTTCCE
T ss_pred             HHHHHHHHHHHHHHhhhCC-ccHHHHHHHHHHHHHHHcCCCCe
Confidence            9999999999999999998 45999999999999999988864

>2dm9_A V-type ATP synthase subunit E; A-ATPase, structural genomics, NPPSFA, national project on P structural and functional analyses; 1.85A {Pyrococcus horikoshii} SCOP: d.81.4.1 PDB: 2dma_A 4dt0_A

Probab=99.45  E-value=4.2e-14  Score=106.05  Aligned_cols=112  Identities=20%  Similarity=0.302  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhHHHHHHHHHH
Q 032818            6 VSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQ   85 (133)
Q Consensus         6 v~~qi~~M~~FI~qEA~EKA~EI~~kA~EEf~iEK~~lV~~ek~kI~~~yekK~Kq~e~~kkI~~S~~~N~~RLkvL~ar   85 (133)
                      +-.+-+.|.+||.+||+++|++|...|.++|+.++..++++..           ++++..+++..|+..|+.|..++.+|
T Consensus        11 il~~A~~~a~~il~eA~~~a~~i~~~a~~e~~~~~~~~~~~a~-----------~e~~~~~~~~~s~~~~~~r~~~l~~~   79 (198)
T 2dm9_A           11 INKEAERKIEYILNEARQQAEKIKEEARRNAEAKAEWIIRRAK-----------TQAELEKQRIIANARLEVRRKRLAIQ   79 (198)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999999999999999999999884           45667888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           86 DDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        86 ~~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      +++++.+++.|.+.|..++  ++.|+.+|.+||.+|+..+.++++
T Consensus        80 ~ev~~~~~~~a~~~l~~l~--~~~y~~~l~~li~e~~~~~~~~~v  122 (198)
T 2dm9_A           80 EEIISSVLEEVKRRLETMS--EDEYFESVKALLKEAIKELNEKKV  122 (198)
T ss_dssp             -CHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred             HHHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHcCCCCE
Confidence            9999999999999999954  567999999999999998866553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d2dm9a1	118	V-type ATP synthase subunit E {Pyrococcus horikosh	97.67

>d2dm9a1 d.81.4.1 (A:81-198) V-type ATP synthase subunit E {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: V-type ATPase subunit E-like
family: V-type ATPase subunit E
domain: V-type ATP synthase subunit E
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.67  E-value=1.4e-05  Score=54.80  Aligned_cols=42  Identities=17%  Similarity=0.355  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHhcccCC
Q 032818           87 DLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQAERASCVTEM  130 (133)
Q Consensus        87 ~~l~~l~~ea~~kL~~~~~d~~~Y~~lL~~LI~Qgl~~L~~~~~  130 (133)
                      ++|++++++|.++|..+++  +.|+.+|++||.||+.+|.++++
T Consensus         1 E~i~~v~~~a~~~l~~~~~--~~Y~~~L~~Li~~a~~~l~~~ev   42 (118)
T d2dm9a1           1 EIISSVLEEVKRRLETMSE--DEYFESVKALLKEAIKELNEKKV   42 (118)
T ss_dssp             CHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHTCSEE
T ss_pred             CHHHHHHHHHHHHHHccCh--hHHHHHHHHHHHHHHHHhCCCcE
Confidence            4799999999999999875  36999999999999999998864