Citrus Sinensis ID: 033055

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHcccHHHHHccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEcccccccccccccEEEEEEcccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHcccHHHHHHHcccccccccccccHEEEEcccccccccccEccccccccccEcHHHcccEHHHHHHHHHHHccccEEEEEEccccccccccccEEEEEEccccEEccccEEc
Coil and Loop (DISEMBL)
MKSSLPALALFFFLLAFAakpslaarhepcltdgkelgSEVIVSALKgvvedgpnlvmsafdcprksswpelvgkNGEVAAAIIEKENPCVHAIVLlegtpvtrdyriDRVRVWVNkkgkvirvprig
Flexible Loop (DISEMBL)
MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKgvvedgpnLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLlegtpvtrdyridrvrvwvnkkgkvirvprig
Low Complexity Region (SEG)
MksslpalalfffllafaakpslaaRHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Disordered region (IsUnstruct)
******ALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRV****
Disordered Region (DISOPRED)
****LPA*ALFFFLLAFAAKPSLAARHEPCLTDGKELGS****************************SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Disordered Region (DISEMBL)
MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Disordered Region (DISPRO)
**SSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	128	2.2.26 [Sep-21-2011]
P19873	68	Inhibitor of trypsin and	N/A	no	0.523	0.985	0.641	3e-19
P16231	111	Wound-induced proteinase	N/A	no	0.812	0.936	0.418	2e-15
P82381	69	Proteinase inhibitor OS=L	N/A	no	0.507	0.942	0.6	3e-15
Q6XNP7	70	Protease inhibitor HPI OS	N/A	no	0.539	0.985	0.550	4e-15
P24076	68	Glu S.griseus protease in	N/A	no	0.523	0.985	0.552	7e-15
P08454	107	Wound-induced proteinase	N/A	no	0.601	0.719	0.437	4e-13
Q00783	107	Proteinase inhibitor 1 OS	N/A	no	0.601	0.719	0.437	9e-12
P05118	111	Wound-induced proteinase	N/A	no	0.757	0.873	0.417	9e-12
P01052	71	Chymotrypsin inhibitor I,	N/A	no	0.531	0.957	0.420	3e-10
P01053	84	Subtilisin-chymotrypsin i	N/A	no	0.492	0.75	0.507	3e-10

>sp|P19873|ITH5_CUCMA Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 2   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61

Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 62  VSPPRIG 68

Specifically inhibits both trypsin and activated Hageman factor.
Cucurbita maxima (taxid: 3661)

>sp|P16231|ICI1_SOLPE Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 18/122 (14%)

Query: 7   ALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRK 66
           A  + FFLLAF+ + +L AR E   +DG E     ++  LK    D          C  K
Sbjct: 6   AHIILFFLLAFSFE-TLMARKE---SDGPE-----VIKLLKEFESDS--------RCKGK 48

Query: 67  SSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
             WPEL+G     A  IIEKENP +  I +LL G+PVT+D+R DRVR++VN  G V+++P
Sbjct: 49  QFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNILGDVVQIP 108

Query: 126 RI 127
           R+
Sbjct: 109 RV 110

Solanum peruvianum (taxid: 4082)

>sp|P82381|ICI_LINUS Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 49/65 (75%)

Query: 63  CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI 122
           CP K++WPELVGK+G +AAA +E+EN  VHAIVL EG+ +T+D+R DRV V VN  G V 
Sbjct: 4   CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVT 63

Query: 123 RVPRI 127
            VP I
Sbjct: 64  SVPHI 68

In vitro, strong inhibitor of bovine beta-trypsin, weak inhibitor of alpha-chymotrypsin, subtilisin BPN', subtilisin Carlsberg and cathepsin G.

Linum usitatissimum (taxid: 4006)

>sp|Q6XNP7|HPI_HEVBR Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query: 60  AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKG 119
           A  CP K+SWPELVG NG++AA II+ EN  V AIV+ EG P+T+D   +RVRV+V++  
Sbjct: 2   ASQCPVKNSWPELVGTNGDIAAGIIQTENANVKAIVVKEGLPITQDLNFNRVRVFVDENR 61

Query: 120 KVIRVPRIG 128
            V +VP IG
Sbjct: 62  VVTQVPAIG 70

Inhibitor of serine proteases, strongly inhibits subtilisin A and weakly inhibits trypsin. Does not inhibit chymotrypsin, papain, pepsin, pronase E, protease type XIII and thermolysin. HPI-1 inhibits subtilisin A with an Ki of 0.21 nM. HPI-2a inhibits subtilisin A with an Ki of 0.08 nM. HPI-2b inhibits subtilisin A with an Ki of 0.1 nM.

Hevea brasiliensis (taxid: 3981)

>sp|P24076|BGIA_MOMCH Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 47/67 (70%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            C  K SWP+LVG  G  A A+IE+ENP V A+++  G+PVT D+R DRVRVWV ++G V
Sbjct: 2   QCQGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWVTERGIV 61

Query: 122 IRVPRIG 128
            R P IG
Sbjct: 62  ARPPAIG 68

Competitively inhibits Glu S.griseus protease by forming probably a 1:1 complex. BGIA has no inhibitory activity against 2 other acidic amino acid-specific endopeptidases (S.aureus protease V8 and B.subtilis proteinase), chymotrypsin, trypsin, pancreatic elastase, and papain, although subtilisin Carlsberg was strongly inhibited.

Momordica charantia (taxid: 3673)

>sp|P08454|ICID_SOLTU Wound-induced proteinase inhibitor 1 OS=Solanum tuberosum PE=1 SV=2

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 3/80 (3%)

Query: 52  DGPNLV--MSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTRDYRI 108
           DGP ++     F+C  K  WPEL+G   ++A  IIEKEN  +  + +LL G+PVT DYR 
Sbjct: 28  DGPEVIELQKEFECNGKQRWPELIGVPTKLAKGIIEKENSLITNVQILLNGSPVTMDYRC 87

Query: 109 DRVRVWVNKKGKVIRVPRIG 128
           +RVR++ N  G V+++PR+ 
Sbjct: 88  NRVRLFDNILGDVVQIPRVA 107

Inhibits both chymotrypsin and trypsin.

Solanum tuberosum (taxid: 4113)

>sp|Q00783|ICI1_SOLTU Proteinase inhibitor 1 OS=Solanum tuberosum PE=3 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 3/80 (3%)

Query: 52  DGPNLV--MSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTRDYRI 108
           DGP ++  +  F C  K  WPEL+G   ++A  IIEKEN  +  + +LL G+PVT D R 
Sbjct: 28  DGPEVIQLLKEFQCKGKLRWPELIGVPTKLAKGIIEKENSLISNVHILLNGSPVTLDIRC 87

Query: 109 DRVRVWVNKKGKVIRVPRIG 128
           DRVR++ N  G V+ +P +G
Sbjct: 88  DRVRLFDNILGYVVDIPVVG 107

Solanum tuberosum (taxid: 4113)

>sp|P05118|ICI1_SOLLC Wound-induced proteinase inhibitor 1 OS=Solanum lycopersicum GN=PIIF PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 18/115 (15%)

Query: 12  FFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSAFDCPRKSSWPE 71
           FFLLA + + +L AR E    DG E     ++  LK   E   NL+     C  K  WPE
Sbjct: 11  FFLLATSFE-TLMARKE---IDGPE-----VIELLK---EFDSNLM-----CEGKQMWPE 53

Query: 72  LVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           L+G   ++A  IIEKENP +  I +LL G+P+T DY  DRVR++ N  G V+++P
Sbjct: 54  LIGVPTKLAKEIIEKENPSITNIPILLSGSPITLDYLCDRVRLFDNILGFVVQMP 108

Solanum lycopersicum (taxid: 4081)

>sp|P01052|ICIA_SOLTU Chymotrypsin inhibitor I, A, B and C subunits OS=Solanum tuberosum PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 61  FDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTRDYRIDRVRVWVNKKG 119
           F+C  K  WPEL+G   ++A  IIEK+N  +  + +LL G+PVT D+R +RVR++ +  G
Sbjct: 3   FECDGKLQWPELIGVPTKLAKEIIEKQNSLISNVHILLNGSPVTMDFRCNRVRLFDDILG 62

Query: 120 KVIRVPRIG 128
            V+++PR+ 
Sbjct: 63  SVVQIPRVA 71

Inhibits both chymotrypsin and trypsin.

Solanum tuberosum (taxid: 4113)

>sp|P01053|ICI2_HORVU Subtilisin-chymotrypsin inhibitor-2A OS=Hordeum vulgare PE=1 SV=2

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%)

Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 22  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 81

Query: 126 RIG 128
           R+G
Sbjct: 82  RVG 84

Inhibits both subtilisin and chymotrypsin.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
26224744	128	type I proteinase inhibitor-like protein	1.0	1.0	0.984	4e-66
284433788	70	proteinase inhibitor [Jatropha curcas]	0.531	0.971	0.705	5e-18
253723128	69	Chain A, Three-Dimensional Structure In	0.523	0.971	0.641	2e-17
124984	68	RecName: Full=Inhibitor of trypsin and h	0.523	0.985	0.641	2e-17
159162696	69	Chain A, Recombinant Cucurbita Maxima Tr	0.523	0.971	0.641	2e-17
399240828	69	proteinase inhibitor [Gossypium arboreum	0.515	0.956	0.666	6e-17
22759723	67	protease inhibitor 2 [Zinnia elegans]	0.515	0.985	0.681	2e-16
357441043	71	Protease inhibitor [Medicago truncatula]	0.554	1.0	0.605	5e-16
255559975	69	Proteinase inhibitor, putative [Ricinus	0.523	0.971	0.656	6e-16
224102775	72	predicted protein [Populus trichocarpa]	0.546	0.972	0.6	6e-16

>gi|26224744|gb|AAN76363.1| type I proteinase inhibitor-like protein [Citrus x paradisi]

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/128 (98%), Positives = 127/128 (99%)

Query: 1   MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVMSA 60
           MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLV SA
Sbjct: 1   MKSSLPALALFFFLLAFAAKPSLAARHEPCLTDGKELGSEVIVSALKGVVEDGPNLVTSA 60

Query: 61  FDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGK 120
           FDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVT+DYRIDRVRVWVNKKGK
Sbjct: 61  FDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGK 120

Query: 121 VIRVPRIG 128
           VIRVPRIG
Sbjct: 121 VIRVPRIG 128

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284433788|gb|ADB85100.1| proteinase inhibitor [Jatropha curcas]

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 56/68 (82%)

Query: 60  AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKG 119
           A +CP KSSWPEL+G NG+ AAA+IEKEN  V+AIVL EGTPVTRD+R DRV VWVN+ G
Sbjct: 2   ASECPGKSSWPELLGANGKAAAALIEKENRHVNAIVLKEGTPVTRDFRCDRVWVWVNECG 61

Query: 120 KVIRVPRI 127
            V+RVP I
Sbjct: 62  VVVRVPII 69

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|253723128|pdb|1TIN|A Chain A, Three-Dimensional Structure In Solution Of Cucurbita Maxima Trypsin Inhibitor-V Determined By Nmr Spectroscopy

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 62

Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 63  VSPPRIG 69

Source: Cucurbita maxima

Species: Cucurbita maxima

Genus: Cucurbita

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124984|sp|P19873.1|ITH5_CUCMA RecName: Full=Inhibitor of trypsin and hageman factor; AltName: Full=CMTI-V gi|227289|prf||1701295A trypsin inhibitor

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 2   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61

Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 62  VSPPRIG 68

Source: Cucurbita maxima

Species: Cucurbita maxima

Genus: Cucurbita

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|159162696|pdb|1MIT|A Chain A, Recombinant Cucurbita Maxima Trypsin Inhibitor V (Rcmti-V) (Nmr, Minimized Average Structure)

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 62

Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 63  VSPPRIG 69

Source: Cucurbita maxima

Species: Cucurbita maxima

Genus: Cucurbita

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399240828|gb|AFP43221.1| proteinase inhibitor [Gossypium arboreum] gi|399240830|gb|AFP43222.1| proteinase inhibitor [Gossypium arboreum]

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 51/66 (77%)

Query: 63  CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI 122
           CP K+SWPELVGK+GE A   IE+EN  V AIVLL+GTPVTRD+R DRV VWV+  G V+
Sbjct: 4   CPGKNSWPELVGKDGEGAKTTIERENSNVDAIVLLDGTPVTRDFRCDRVWVWVDSNGHVV 63

Query: 123 RVPRIG 128
           R P IG
Sbjct: 64  RPPTIG 69

Source: Gossypium arboreum

Species: Gossypium arboreum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22759723|dbj|BAC10910.1| protease inhibitor 2 [Zinnia elegans]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 51/66 (77%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
           +C  KSSWPELVG+ GE A   IEKENP V+AIVLL+GT VT+D+R DRV VWVN KG V
Sbjct: 1   ECKGKSSWPELVGEKGEAARLTIEKENPLVNAIVLLDGTGVTKDFRCDRVWVWVNSKGIV 60

Query: 122 IRVPRI 127
           IR P I
Sbjct: 61  IRTPII 66

Source: Zinnia elegans

Species: Zinnia violacea

Genus: Zinnia

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441043|ref|XP_003590799.1| Protease inhibitor [Medicago truncatula] gi|355479847|gb|AES61050.1| Protease inhibitor [Medicago truncatula]

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 53/71 (74%)

Query: 58  MSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNK 117
           MS  +C  KSSWPELVG  G+VA A I++EN  V AI++LEG+ VT D R DRVRVWV+K
Sbjct: 1   MSDDECKGKSSWPELVGVEGKVAEATIQRENASVKAIIVLEGSSVTDDLRFDRVRVWVDK 60

Query: 118 KGKVIRVPRIG 128
           +G V +VP IG
Sbjct: 61  EGIVTQVPTIG 71

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559975|ref|XP_002521006.1| Proteinase inhibitor, putative [Ricinus communis] gi|223539843|gb|EEF41423.1| Proteinase inhibitor, putative [Ricinus communis]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 50/67 (74%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
           DC  K+SWPELVG NG+ AAA IEKEN  V AIVL EGTPVT+D+R  RV VWV++ G V
Sbjct: 3   DCLGKNSWPELVGANGDEAAAAIEKENKYVDAIVLKEGTPVTKDFRCSRVWVWVDENGVV 62

Query: 122 IRVPRIG 128
            R P IG
Sbjct: 63  TRTPTIG 69

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102775|ref|XP_002334124.1| predicted protein [Populus trichocarpa] gi|222869703|gb|EEF06834.1| predicted protein [Populus trichocarpa]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query: 59  SAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKK 118
           S   C  KSSWPEL+G  G+VAAA IE+ENP V AI++L+G+ V+ D+R DRV VWV+++
Sbjct: 3   SDTTCQGKSSWPELLGAEGKVAAATIERENPLVEAIIVLDGSEVSLDFRCDRVWVWVDER 62

Query: 119 GKVIRVPRIG 128
           G VI VPRIG
Sbjct: 63  GIVIEVPRIG 72

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	128
TAIR|locus:2064981	70	AT2G38870 [Arabidopsis thalian	0.523	0.957	0.567	7.5e-18
UNIPROTKB|Q6XNP7	70	PI1 "Protease inhibitor HPI" [	0.539	0.985	0.550	2.6e-15
UNIPROTKB|Q40059	84	Ica-2 "Chymotrypsin inhibitor	0.5	0.761	0.484	8.2e-12
TAIR|locus:2102822	85	AT3G46860 [Arabidopsis thalian	0.5	0.752	0.468	1.4e-09
TAIR|locus:2158397	103	AT5G43570 [Arabidopsis thalian	0.468	0.582	0.483	6.8e-08

TAIR|locus:2064981 AT2G38870 [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 38/67 (56%), Positives = 53/67 (79%)

Query:    62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
             +CPRK+SWPEL G NG+ AA +IE+ENP V+A V+L+G+PVT D+R DRVRV+V+    V
Sbjct:     4 ECPRKNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDGNRIV 63

Query:   122 IRVPRIG 128
             ++ P+ G
Sbjct:    64 VKTPKSG 70

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IMP

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|Q6XNP7 PI1 "Protease inhibitor HPI" [Hevea brasiliensis (taxid:3981)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query:    60 AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKG 119
             A  CP K+SWPELVG NG++AA II+ EN  V AIV+ EG P+T+D   +RVRV+V++  
Sbjct:     2 ASQCPVKNSWPELVGTNGDIAAGIIQTENANVKAIVVKEGLPITQDLNFNRVRVFVDENR 61

Query:   120 KVIRVPRIG 128
              V +VP IG
Sbjct:    62 VVTQVPAIG 70

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IDA

UNIPROTKB|Q40059 Ica-2 "Chymotrypsin inhibitor 2" [Hordeum vulgare (taxid:4513)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 31/64 (48%), Positives = 45/64 (70%)

Query:    65 RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRV 124
             +K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +V
Sbjct:    21 QKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQV 80

Query:   125 PRIG 128
             PR+G
Sbjct:    81 PRVG 84

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2102822 AT3G46860 [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/64 (46%), Positives = 40/64 (62%)

Query:    65 RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRV 124
             +K  WPELVGKNG++A   IE+ENP V AIVL  G     ++  +RV V++   G+V   
Sbjct:    22 KKYRWPELVGKNGQLAKMTIERENPNVLAIVLRYGEKRIENFCCNRVFVYLGSNGQVADA 81

Query:   125 PRIG 128
             P IG
Sbjct:    82 PMIG 85

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2158397 AT5G43570 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 29/60 (48%), Positives = 35/60 (58%)

Query:    66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
             KSSWPELVG+ GE    II++EN  V A ++ E   V      DRV V VN +G V R P
Sbjct:    14 KSSWPELVGRRGEEVKEIIDRENTKVTAKIISENAVVLAVVICDRVYVRVNDQGIVTRTP 73


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       104   0.00091  102 3  11 22  0.44    30
                                                     29  0.50    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  126 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.46u 0.09s 11.55t   Elapsed:  00:00:01
  Total cpu time:  11.46u 0.09s 11.55t   Elapsed:  00:00:01
  Start:  Fri May 10 12:29:55 2013   End:  Fri May 10 12:29:56 2013

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0006952 "defense response" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.10700005 hypothetical protein (72 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	128
pfam00280	63	pfam00280, potato_inhibit, Potato inhibitor I fami	1e-34

>gnl|CDD|201130 pfam00280, potato_inhibit, Potato inhibitor I family

 Score =  114 bits (287), Expect = 1e-34
 Identities = 42/63 (66%), Positives = 49/63 (77%)

Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+SWPELVGK GE A AIIEKENP V  +VL EG+PVT D+R +RVRV+VN  G V+R P
Sbjct: 1   KTSWPELVGKTGEEAKAIIEKENPDVDVVVLPEGSPVTADFRCNRVRVFVNDNGIVVRTP 60

Query: 126 RIG 128
            IG
Sbjct: 61  VIG 63

Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	128
PF00280	63	potato_inhibit: Potato inhibitor I family; InterPr	99.95
PF11720	60	Inhibitor_I78: Peptidase inhibitor I78 family; Int	99.65

>PF00280 potato_inhibit: Potato inhibitor I family; InterPro: IPR000864 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=99.95  E-value=5e-29  Score=167.21  Aligned_cols=63  Identities=68%  Similarity=1.113  Sum_probs=59.4

Q ss_pred             CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      |++||||||+++++|+++|++|||++++.++++|+++|+||||||||||+|.+|+|+++|+||
T Consensus         1 K~sWPELVG~~~~~A~~~I~~e~P~v~v~vlp~gs~vt~df~~~RVrv~vd~~~~V~~~P~iG   63 (63)
T PF00280_consen    1 KTSWPELVGKSGEEAKAIIERENPDVTVVVLPEGSPVTMDFRCDRVRVFVDSNGIVVRVPRIG   63 (63)
T ss_dssp             -SB-GGGTTSBHHHHHHHHHHHSTTSEEEEEETTSEEESSBETTEEEEEEETTSBBES-SEEE
T ss_pred             CCCCchhcCCCHHHHHHHHHHHCCCCeEEEEeCCCCcCCCcCCCEEEEEECCCCeEEeCCCcC
Confidence            799999999999999999999999999999999999999999999999999999999999998

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family of proteinase inhibitors belong to MEROPS inhibitor family I13, clan IG. They inhibit peptidases of the S1 (IPR001254 from INTERPRO) and S8 (IPR000209 from INTERPRO) families []. Potato inhibitor type I sequences are not solely restricted to potatoes but are found in other plant species for example: barley endosperm chymotrypsin inhibitor [], and pumpkin trypsin inhibitor. Exceptions are found in leech's, e.g.Hirudo medicinalis (Medicinal leech), but not other metazoa []. In general, the proteins have retained a specificity towards chymotrypsin-like and elastase-like proteases []. Structurally these inhibitors are small (60 to 90 residues) and in contrast with other families of protease inhibitors, they lack disulphide bonds. The inhibitor is a wedge-shaped molecule, its pointed edge formed by the protease-binding loop, which contains the scissile bond. The loop binds tightly to the protease active site, subsequent cleavage of the scissile bond causing inhibition of the enzyme []. The inhibitors (designated type I and II) are synthesised in potato tubers, increasing in concentration as the tuber develops. Synthesis of the inhibitors throughout the plant is also induced by leaf damage; this systemic response being triggered by the release of a putative plant hormone []. Examples found in the bacteria and archaea are probable false positives.; GO: 0004867 serine-type endopeptidase inhibitor activity, 0009611 response to wounding; PDB: 1TEC_I 1SBN_I 1ACB_I 1EGP_A 3TEC_I 2SEC_I 1EGL_A 2TEC_I 1SIB_I 1MEE_I ....

>PF11720 Inhibitor_I78: Peptidase inhibitor I78 family; InterPro: IPR021719 This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78

Probab=99.65  E-value=6.1e-17  Score=106.68  Aligned_cols=57  Identities=33%  Similarity=0.440  Sum_probs=47.9

Q ss_pred             CCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEec
Q 033055           63 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRV  124 (128)
Q Consensus        63 C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrV  124 (128)
                      |+ ++..+.|||++.+++.....    ...+||++||+++|||||+||+||++|++|+|+++
T Consensus         1 C~-A~~~q~lvGq~~~~~~~~~~----~~~~Rvi~Pg~~vTmDyr~dRLnv~~D~~g~I~~v   57 (60)
T PF11720_consen    1 CG-AAAAQSLVGQPASAAEREEL----AETVRVIRPGDAVTMDYRPDRLNVEVDDDGVITRV   57 (60)
T ss_pred             CC-HHHHHHhhCCCccccccccc----ccceEEeCCCCcCcccCCCCcEEEEECCCCcEEEE
Confidence            64 67888999999886543322    33689999999999999999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	128
1mit_A	69	Recombinant Cucurbita Maxima Trypsin Inhibitor V (R		5e-20
1tin_A	69	Three-Dimensional Structure In Solution Of Cucurbit		5e-20
1dwm_A	70	Solution Structure Of Linum Usitatissinum Trypsin I		5e-16
1vbw_A	68	Crystal Structure Of Bitter Gourd Trypsin Inhibitor		2e-15
1y4a_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		4e-12
1lw6_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		6e-12
3rdy_A	79	Crystal Structure Of Buckwheat Trypsin Inhibitor Rb		7e-12
1tm3_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		7e-12
1tm1_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		1e-11
1tm7_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		1e-11
1tmg_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-11
1tm5_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-11
3ci2_A	66	Refinement Of The Three-Dimensional Solution Struct		2e-11
1y3b_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-11
1coa_I	64	The Effect Of Cavity Creating Mutations In The Hydr		2e-11
1tm4_I	64	Crystal Structure Of The Complex Of Subtilsin Bpn'w		3e-11
1y34_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		3e-11
2ci2_I	83	Crystal And Molecular Structure Of The Serine Prote		4e-11
1ypc_I	64	Direct Observation Of Better Hydration At The N-Ter		4e-11
1y3f_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		5e-11
1y1k_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		5e-11
1ypb_I	64	Direct Observation Of Better Hydration At The N-Ter		7e-11
1ypa_I	64	Direct Observation Of Better Hydration At The N-Ter		7e-11
1y3d_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		8e-11
1y48_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		8e-11
1y3c_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		8e-11
1y33_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		9e-11
1to1_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-10
1hym_A	45	Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Ave		3e-10
1cis_A	66	Context Dependence Of Protein Secondary Structure F		9e-08
1sbn_I	70	Refined Crystal Structures Of Subtilisin Novo In Co		5e-07
4b1t_B	70	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
4b2b_B	71	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
4b2a_B	66	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
1cse_I	70	The High-Resolution X-Ray Crystal Structure Of The		4e-06
1mee_I	64	The Complex Between The Subtilisin From A Mesophili		4e-06
4h4f_B	70	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		5e-06
1tec_I	70	Crystallographic Refinement By Incorporation Of Mol		6e-06
1sib_I	70	Refined Crystal Structures Of Subtilisin Novo In Co		1e-05

>pdb|1MIT|A Chain A, Recombinant Cucurbita Maxima Trypsin Inhibitor V (Rcmti-V) (Nmr, Minimized Average Structure) Length = 69

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)
Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 62
Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 63  VSPPRIG 69

>pdb|1TIN|A Chain A, Three-Dimensional Structure In Solution Of Cucurbita Maxima Trypsin Inhibitor-V Determined By Nmr Spectroscopy Length = 69

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)
Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G V
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 62
Query: 122 IRVPRIG 128
           +  PRIG
Sbjct: 63  VSPPRIG 69

>pdb|1DWM|A Chain A, Solution Structure Of Linum Usitatissinum Trypsin Inhibitor (Luti) Length = 70

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 63  CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI 122
           CP K++WPELVGK+G +AAA +E+EN  VHAIVL EG+ +T+D+R DRV V VN  G V 
Sbjct: 5   CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVT 64
Query: 123 RVPRI 127
            VP I
Sbjct: 65  SVPHI 69

>pdb|1VBW|A Chain A, Crystal Structure Of Bitter Gourd Trypsin Inhibitor Length = 68

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 63  CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI 122
           C  KSSWP+LVG  G  A A+IE+ENP V A+++  G+  T+D+R DRVRVWV ++G V 
Sbjct: 3   CQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVA 62
Query: 123 RVPRIG 128
           R P IG
Sbjct: 63  RPPTIG 68

>pdb|1Y4A|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59r/e60s Mutant Length = 64

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VTR YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTRSYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1LW6|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 64

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhibitor Rbti At 1.84 Angstrom Resolution Length = 79

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 63  CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI 122
           C  K  WPELVG+ G  AA IIE EN  V AIVL EG+ V RD R DRV V+V+++G V+
Sbjct: 14  CSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVV 73
Query: 123 RVP 125
             P
Sbjct: 74  DTP 76

>pdb|1TM3|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59k Mutant Length = 64

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT++YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TM1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 Length = 64

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TM7|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59y Mutant Length = 64

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTYEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TMG|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59f Mutant Length = 64

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTFEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TM5|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59a Mutant Length = 64

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTAEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|3CI2|A Chain A, Refinement Of The Three-Dimensional Solution Structure Of Barley Serine Proteinase Inhibitor 2 And Comparison With The Structures In Crystals Length = 66

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 4   KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 63
Query: 126 RIG 128
           R+G
Sbjct: 64  RVG 66

>pdb|1Y3B|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60s Mutant Length = 64

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT  YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMSYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1COA|I Chain I, The Effect Of Cavity Creating Mutations In The Hydrophobic Core Of Chymotrypsin Inhibitor 2 Length = 64

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   V  VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNVAEVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TM4|I Chain I, Crystal Structure Of The Complex Of Subtilsin Bpn'with Chymotrypsin Inhibitor 2 M59g Mutant Length = 64

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTGEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y34|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60a Mutant Length = 64

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT  YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMAYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|2CI2|I Chain I, Crystal And Molecular Structure Of The Serine Proteinase Inhibitor Ci-2 From Barley Seeds Length = 83

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   +  VP
Sbjct: 21  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVP 80
Query: 126 RIG 128
           R+G
Sbjct: 81  RVG 83

>pdb|1YPC|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+   A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 2   KTEWPELVGKSVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y3F|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 F69a Mutant Length = 64

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRVR+ V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLAVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y1K|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58a Mutant Length = 64

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT V  +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVAMEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1YPB|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK    A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 2   KTEWPELVGKGVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1YPA|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK    A  +I ++ P    IVL  GT VT +YRIDRVR++V+K   + +VP
Sbjct: 2   KTEWPELVGKAVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y3D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R67a Mutant Length = 64

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRIDRV ++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVALFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y48|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R65a Mutant Length = 64

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YRID VR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDAVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y3C|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R62a Mutant Length = 64

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +Y IDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYAIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1Y33|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58p Mutant Length = 64

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT V  +YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVPMEYRIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1TO1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 Y61a Mutant Length = 64

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT + RIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEARIDRVRLFVDRLDNIAQVP 61
Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>pdb|1HYM|A Chain A, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average Nmr Structure) Length = 45

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTR 104
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK 45

>pdb|1CIS|A Chain A, Context Dependence Of Protein Secondary Structure Formation. The Three-Dimensional Structure And Stability Of A Hybrid Between Chymotrypsin Inhibitor 2 And Helix E From Subtilisin Carlsberg Length = 66

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTR---DYRIDRVRVWVNKKGKVI 122
           K+ WPELVGK+ E A  +I ++ P    I++LE   V     +YRIDRVR+ V+K   + 
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPEAQ-IIVLEKQAVDNAYAEYRIDRVRLAVDKLDNIA 60
Query: 123 RVPRIG 128
           +VPR+G
Sbjct: 61  QVPRVG 66

>pdb|1SBN|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex With Wild-Type And Two Mutant Eglins. Comparison With Other Serine Proteinase Inhibitor Complexes Length = 70

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P  +   L EG+PVTRD R +RVRV+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTRDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

>pdb|4B1T|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 70

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT+D R +RVRV+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

>pdb|4B2B|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 71

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT+D R +RVRV+ N    V+  VP 
Sbjct: 10  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 69
Query: 127 IG 128
           +G
Sbjct: 70  VG 71

>pdb|4B2A|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 66

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT+D R +RVRV+ N    V+  VP 
Sbjct: 5   SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 64
Query: 127 IG 128
           +G
Sbjct: 65  VG 66

>pdb|1CSE|I Chain I, The High-Resolution X-Ray Crystal Structure Of The Complex Formed Between Subtilisin Carlsberg And Eglin C, An Elastase Inhibitor From The Leech Hirudo Medicinalis. Structural Analysis, Subtilisin Structure And Interface Geometry Length = 70

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P  +   L EG+PVT D R +RVRV+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

>pdb|1MEE|I Chain I, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 64

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P  +   L EG+PVT D R +RVRV+ N    V+  VP 
Sbjct: 3   SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 62
Query: 127 IG 128
           +G
Sbjct: 63  VG 64

>pdb|4H4F|B Chain B, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 70

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT D R +RVRV+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

>pdb|1TEC|I Chain I, Crystallographic Refinement By Incorporation Of Molecular Dynamics. The Thermostable Serine Protease Thermitase Complexed With Eglin-C Length = 70

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT D R +RVRV+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

>pdb|1SIB|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex With Wild-Type And Two Mutant Eglins. Comparison With Other Serine Proteinase Inhibitor Complexes Length = 70

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVI-RVPR 126
           S+PE+VGK  + A        P      L EG+PVT D R +RV+V+ N    V+  VP 
Sbjct: 9   SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVKVFYNPGTNVVNHVPH 68
Query: 127 IG 128
           +G
Sbjct: 69  VG 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	128
1dwm_A	70	LUTI, linum usitatissinum trypsin inhibitor; serin	1e-34
3rdy_A	79	BWI-1=protease inhibitor/trypsin inhibitor; serine	2e-34
1mit_A	69	RCMTI-V, trypsin inhibitor V; serine protease inhi	6e-34
1vbw_A	68	Trypsin inhibitor BGIT; BGTI, protein binding; HET	7e-34
2ci2_I	83	Chymotrypsin inhibitor 2; proteinase inhibitor (ch	4e-33
1to2_I	64	Chymotrypsin inhibitor 2; serine protease, hydrola	2e-31
1cse_I	70	Eglin C; complex(serine proteinase-inhibitor); 1.2	2e-31
1hym_A	45	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	2e-22
1cq4_A	47	Protein (serine proteinase inhibitor 2); serine pr	2e-10
1hym_B	26	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	9e-06

>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1 Length = 70

 Score =  113 bits (285), Expect = 1e-34
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query: 60  AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKG 119
           +  CP K++WPELVGK+G +AAA +E+EN  VHAIVL EG+ +T+D+R DRV V VN  G
Sbjct: 2   SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHG 61

Query: 120 KVIRVPRI 127
            V  VP I
Sbjct: 62  VVTSVPHI 69

>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} PDB: 3rdz_C Length = 79

 Score =  113 bits (285), Expect = 2e-34
 Identities = 35/66 (53%), Positives = 43/66 (65%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            C  K  WPELVG+ G  AA IIE EN  V AIVL EG+ V RD R DRV V+V+++G V
Sbjct: 13  QCSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVV 72

Query: 122 IRVPRI 127
           +  P +
Sbjct: 73  VDTPVV 78

>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A Length = 69

 Score =  111 bits (280), Expect = 6e-34
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 60  AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKG 119
              CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+D+R +RVR+WVNK+G
Sbjct: 1   GSSCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 60

Query: 120 KVIRVPRIG 128
            V+  PRIG
Sbjct: 61  LVVSPPRIG 69

>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia} Length = 68

 Score =  111 bits (280), Expect = 7e-34
 Identities = 36/67 (53%), Positives = 47/67 (70%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            C  KSSWP+LVG  G  A A+IE+ENP V A+++  G+  T+D+R DRVRVWV ++G V
Sbjct: 2   RCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIV 61

Query: 122 IRVPRIG 128
            R P IG
Sbjct: 62  ARPPTIG 68

>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I Length = 83

 Score =  110 bits (276), Expect = 4e-33
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 50  VEDGPNLVMSAF--DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYR 107
           VE  P  V +        K+ WPELVGK+ E A  +I ++ P    IVL  GT VT +YR
Sbjct: 3   VEKKPEGVNTGAGDRHNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYR 62

Query: 108 IDRVRVWVNKKGKVIRVPRIG 128
           IDRVR++V+K   +  VPR+G
Sbjct: 63  IDRVRLFVDKLDNIAEVPRVG 83

>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ... Length = 64

 Score =  105 bits (263), Expect = 2e-31
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT++YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61

Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B Length = 70

 Score =  105 bits (264), Expect = 2e-31
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 65  RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNK-KGKVIR 123
              S+PE+VGK  + A        P  +   L EG+PVT D R +RVRV+ N     V  
Sbjct: 6   ELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNH 65

Query: 124 VPRIG 128
           VP +G
Sbjct: 66  VPHVG 70

>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1 Length = 45

 Score = 82.1 bits (203), Expect = 2e-22
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTR 104
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVT+
Sbjct: 3   SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK 45

>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1 Length = 47

 Score = 51.5 bits (123), Expect = 2e-10
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYR 107
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT   +
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQ 43

>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1 Length = 26

 Score = 38.8 bits (90), Expect = 9e-06
 Identities = 15/24 (62%), Positives = 20/24 (83%)

Query: 105 DYRIDRVRVWVNKKGKVIRVPRIG 128
           D+R +RVR+WVNK+G V+  PRIG
Sbjct: 1   DFRCNRVRIWVNKRGLVVSPPRIG 24

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	128
1mit_A	69	RCMTI-V, trypsin inhibitor V; serine protease inhi	99.97
1vbw_A	68	Trypsin inhibitor BGIT; BGTI, protein binding; HET	99.97
1dwm_A	70	LUTI, linum usitatissinum trypsin inhibitor; serin	99.97
1to2_I	64	Chymotrypsin inhibitor 2; serine protease, hydrola	99.96
3rdy_A	79	BWI-1=protease inhibitor/trypsin inhibitor; serine	99.96
2ci2_I	83	Chymotrypsin inhibitor 2; proteinase inhibitor (ch	99.96
1cse_I	70	Eglin C; complex(serine proteinase-inhibitor); 1.2	99.96
1cq4_A	47	Protein (serine proteinase inhibitor 2); serine pr	99.85
1hym_A	45	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	99.69
1hym_B	26	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	99.1

>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A

Probab=99.97  E-value=2.9e-32  Score=183.41  Aligned_cols=67  Identities=64%  Similarity=1.166  Sum_probs=65.7

Q ss_pred             CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      +|++|++||||||+++++|+.+|++|||++++|||++|+++||||||||||||+|++|+|+++|+||
T Consensus         3 ~c~~K~sWpELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Dfr~~RV~V~vD~~g~V~~vP~vG   69 (69)
T 1mit_A            3 SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG   69 (69)
T ss_dssp             CCSSCSCCCCCTTSHHHHHHHHHHHHCTTSEEEEEETTCCCCSSCCTTEEEEEEETTTEEECCSSCC
T ss_pred             CCCCcCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence            3999999999999999999999999999999999999999999999999999999999999999998

>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}

Probab=99.97  E-value=5.8e-32  Score=181.49  Aligned_cols=67  Identities=54%  Similarity=0.997  Sum_probs=65.7

Q ss_pred             CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      +|++|++||||||+++++|+.+|++|||++++|++++|+++||||||||||||+|++|+|+++|+||
T Consensus         2 ~c~~K~sWpELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~vG   68 (68)
T 1vbw_A            2 RCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARPPTIG   68 (68)
T ss_dssp             CSCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTSCCCCSCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CCCCCCcCHHHCCcCHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEecCcCC
Confidence            3999999999999999999999999999999999999999999999999999999999999999998

>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1

Probab=99.97  E-value=3.2e-31  Score=178.20  Aligned_cols=67  Identities=58%  Similarity=0.958  Sum_probs=65.6

Q ss_pred             CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      .|++|++||||||+++++|+.+|++|+|++++|||+||+++|||||||||||++|++|+|+++|+||
T Consensus         4 ~c~~k~sWpelVG~~~~~A~~~i~~e~p~~~vrvl~pg~~vT~Dfr~~RV~v~vD~~g~V~~vP~ig   70 (70)
T 1dwm_A            4 RCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT   70 (70)
T ss_dssp             CCSSCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBBC
T ss_pred             cCCChhHhHHHcCCcHHHHHHHHHHhCCCceEEEecCCCccCCccCCCeEEEEECCCCeEEeCCcCC
Confidence            3999999999999999999999999999999999999999999999999999999999999999998

>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...

Probab=99.96  E-value=1.4e-30  Score=172.94  Aligned_cols=63  Identities=49%  Similarity=0.883  Sum_probs=62.2

Q ss_pred             CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      |++||||||+++++|+.+|++|||++.+|++++|+++||||||||||||+|++|+|+++|+||
T Consensus         2 k~sWPELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~iG   64 (64)
T 1to2_I            2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG   64 (64)
T ss_dssp             CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CcCCHhhCCCcHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCeEEecCcCC
Confidence            899999999999999999999999999999999999999999999999999999999999998

>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C

Probab=99.96  E-value=4.5e-30  Score=178.06  Aligned_cols=66  Identities=53%  Similarity=0.875  Sum_probs=64.5

Q ss_pred             CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcC
Q 033055           62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRI  127 (128)
Q Consensus        62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~V  127 (128)
                      +|++|++||||||+++++|+++|++|||+++++|+++|+++||||||||||||+|++|+|+++|+|
T Consensus        13 ~~~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~Vl~~Gs~VT~Dfr~~RVrV~VD~~g~V~~~P~i   78 (79)
T 3rdy_A           13 QCSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDTPVV   78 (79)
T ss_dssp             CCCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCSSEEEEEECTTSBBCSCCBB
T ss_pred             cCCCCCcChHHCCcCHHHHHHHHHHHCCCCceEEeCCCCccCCccCCCEEEEEECCCCeEEeCcee
Confidence            488999999999999999999999999999999999999999999999999999999999999997

>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I

Probab=99.96  E-value=4e-30  Score=178.73  Aligned_cols=66  Identities=48%  Similarity=0.778  Sum_probs=63.9

Q ss_pred             CCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           63 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        63 C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      |++|++||||||+++++|+.+|++|||++++|||++|++|||||||||||||+|++|+|+++|+||
T Consensus        18 ~~~K~sWPELVG~~~~~A~~~I~~d~p~v~vrVl~~G~~VT~Dfr~dRV~V~vD~~g~V~~vP~vG   83 (83)
T 2ci2_I           18 HNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVPRVG   83 (83)
T ss_dssp             -CCCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CCChhhhHHHcCCcHHHHHHHHHhhCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence            668999999999999999999999999999999999999999999999999999999999999998

>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B

Probab=99.96  E-value=6.1e-30  Score=172.64  Aligned_cols=64  Identities=39%  Similarity=0.578  Sum_probs=61.3

Q ss_pred             CCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEEC-CCCCEEecCcCC
Q 033055           65 RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVN-KKGKVIRVPRIG  128 (128)
Q Consensus        65 gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD-~~g~VvrVP~VG  128 (128)
                      +|++||||||+++++|+.+|++|||++++||+++|+++||||||||||||+| ++|+|+++|+||
T Consensus         6 ~k~sWPELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~V~vD~~~g~V~~vP~iG   70 (70)
T 1cse_I            6 ELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG   70 (70)
T ss_dssp             --CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred             CCCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCccCCCeEEEEEcCCCCEEEeCCcCC
Confidence            5899999999999999999999999999999999999999999999999999 999999999998

>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1

Probab=99.85  E-value=4.2e-22  Score=125.71  Aligned_cols=46  Identities=41%  Similarity=0.582  Sum_probs=36.5

Q ss_pred             CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeE
Q 033055           66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRV  111 (128)
Q Consensus        66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRV  111 (128)
                      |++||||||+++++|+++|++|||+++++|+++|++|||||||||+
T Consensus         2 K~sWPELVG~~~~~A~~~I~~e~p~v~v~vl~~gs~vT~Df~~~R~   47 (47)
T 1cq4_A            2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQQQGM   47 (47)
T ss_dssp             CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCC---------
T ss_pred             CcCChhhcCccHHHHHHHHHHHCCCCEEEEeCCCCCcCcccCCCCC
Confidence            8999999999999999999999999999999999999999999996

>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1

Probab=99.69  E-value=2.4e-17  Score=103.72  Aligned_cols=42  Identities=67%  Similarity=1.138  Sum_probs=41.2

Q ss_pred             CCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCC
Q 033055           63 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTR  104 (128)
Q Consensus        63 C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTm  104 (128)
                      |++|++||||||+++++|+++|++|||++.+.|+++|++||+
T Consensus         4 c~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~vl~~gs~vT~   45 (45)
T 1hym_A            4 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK   45 (45)
T ss_dssp             CCSCSBCCCCTTSCHHHHHHHHHHHCTTCEEEEEECCSCCCC
T ss_pred             CCCCCcChhhcCCcHHHHHHHHHHHCCCCeEEEecCCCcCCC
Confidence            999999999999999999999999999999999999999996

>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1

Probab=99.10  E-value=3.8e-11  Score=67.86  Aligned_cols=24  Identities=63%  Similarity=1.258  Sum_probs=23.5

Q ss_pred             CCcCCeEEEEECCCCCEEecCcCC
Q 033055          105 DYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus       105 Dfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      ||||+||+||+|++|+|+++|+||
T Consensus         1 Df~~~RVrvfvd~~g~V~~~P~iG   24 (26)
T 1hym_B            1 DFRCNRVRIWVNKRGLVVSPPRIG   24 (26)
T ss_dssp             CCCTTEEEEEEETTTEEECCSBCC
T ss_pred             CCCCCEEEEEECCCCcEEECCccc
Confidence            899999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	128
g1hym.1	68	d.40.1.1 (A:,B:) Trypsin inhibitor V {Pumpkin (Cuc	2e-35
d1dwma_	69	d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum	3e-35
d1to2i_	64	d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley	9e-33
d1csei_	63	d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis)	1e-29

>d1dwma_ d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum usitatissimum) [TaxId: 4006]} Length = 69

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Trypsin inhibitor LUTI
species: Flax (Linum usitatissimum) [TaxId: 4006]

 Score =  114 bits (286), Expect = 3e-35
 Identities = 39/66 (59%), Positives = 49/66 (74%)

Query: 62  DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKV 121
            CP K++WPELVGK+G +AAA +E+EN  VHAIVL EG+ +T+D+R DRV V VN  G V
Sbjct: 3   RCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVV 62

Query: 122 IRVPRI 127
             VP I
Sbjct: 63  TSVPHI 68

>d1to2i_ d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 64

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Chymotrypsin inhibitor CI-2
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  107 bits (269), Expect = 9e-33
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query: 66  KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVP 125
           K+ WPELVGK+ E A  +I ++ P    IVL  GT VT++YRIDRVR++V++   + +VP
Sbjct: 2   KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61

Query: 126 RIG 128
           R+G
Sbjct: 62  RVG 64

>d1csei_ d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]} Length = 63

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Eglin C
species: Leech (Hirudo medicinalis) [TaxId: 6421]

 Score = 99.8 bits (249), Expect = 1e-29
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 68  SWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNK-KGKVIRVPR 126
           S+PE+VGK  + A        P  +   L EG+PVT D R +RVRV+ N     V  VP 
Sbjct: 2   SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 61

Query: 127 IG 128
           +G
Sbjct: 62  VG 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	128
g1hym.1	68	Trypsin inhibitor V {Pumpkin (Cucurbita maxima) [T	99.97
d1dwma_	69	Trypsin inhibitor LUTI {Flax (Linum usitatissimum)	99.97
d1to2i_	64	Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulga	99.96
d1csei_	63	Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]}	99.95
d1pyya1	61	Penicillin-binding protein 2x (pbp-2x), c-terminal	81.41

>d1dwma_ d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum usitatissimum) [TaxId: 4006]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Trypsin inhibitor LUTI
species: Flax (Linum usitatissimum) [TaxId: 4006]

Probab=99.97  E-value=3.3e-31  Score=178.47  Aligned_cols=66  Identities=59%  Similarity=0.978  Sum_probs=64.8

Q ss_pred             CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcC
Q 033055           62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRI  127 (128)
Q Consensus        62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~V  127 (128)
                      +|+||++||||||+++++|+++|++|||++++.++++|+++|+||||||||||+|++|+|+++|+|
T Consensus         3 ~C~gK~sWPELVG~~~~~A~~~I~~enp~v~v~v~~~gs~vt~Dfr~~RVrv~Vd~~g~V~~~P~I   68 (69)
T d1dwma_           3 RCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHI   68 (69)
T ss_dssp             CCSSCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBB
T ss_pred             cCCCCCcCHHHCCCCHHHHHHHHHHHCCCceEEEeeCCCcccCcccCCEEEEEECCCCcEEecccc
Confidence            399999999999999999999999999999999999999999999999999999999999999998

>d1to2i_ d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Chymotrypsin inhibitor CI-2
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.96  E-value=3.2e-30  Score=171.43  Aligned_cols=63  Identities=49%  Similarity=0.883  Sum_probs=62.3

Q ss_pred             CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055           66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG  128 (128)
Q Consensus        66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG  128 (128)
                      |+|||||||+++++|+++|++|||++++.++++|+++|+||||||||||+|++|+|+++|+||
T Consensus         2 K~sWPELVG~~~~~Ak~~I~~e~p~v~v~v~p~gs~vt~Dfr~~RVrv~Vd~~g~V~~~P~iG   64 (64)
T d1to2i_           2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG   64 (64)
T ss_dssp             CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CccChhhcCCCHHHHHHHHHHhCCCceEEEecCCCcccCcccCCEEEEEECCCCeEEeCCCCC
Confidence            899999999999999999999999999999999999999999999999999999999999998

>d1csei_ d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Eglin C
species: Leech (Hirudo medicinalis) [TaxId: 6421]

Probab=99.95  E-value=7.4e-29  Score=164.29  Aligned_cols=62  Identities=40%  Similarity=0.608  Sum_probs=60.5

Q ss_pred             CCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECC-CCCEEecCcCC
Q 033055           67 SSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNK-KGKVIRVPRIG  128 (128)
Q Consensus        67 ~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~-~g~VvrVP~VG  128 (128)
                      +|||||||+++++|+++|++|||++++.++++|+++|+||||||||||+|+ +|+|+++|+||
T Consensus         1 ~SWPELVG~~~~~A~~~I~~e~p~v~v~v~p~gs~vt~Dfr~~RVrv~Vd~~~g~V~~~P~iG   63 (63)
T d1csei_           1 KSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG   63 (63)
T ss_dssp             CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred             CCChhhcCCCHHHHHHHHHHHCCCceEEEEeCCCcccCcccCCEEEEEEECCCCEEEeCCCCC
Confidence            689999999999999999999999999999999999999999999999996 89999999998

>d1pyya1 d.11.1.1 (A:632-692) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
superfamily: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
family: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
domain: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.41  E-value=0.83  Score=27.37  Aligned_cols=48  Identities=17%  Similarity=0.184  Sum_probs=35.5

Q ss_pred             CCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCC--------CcCCeEEEEEC
Q 033055           67 SSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRD--------YRIDRVRVWVN  116 (128)
Q Consensus        67 ~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmD--------fr~dRVnV~VD  116 (128)
                      -.-|+++|.+..+|...+++.  +++++|+..|..|+.-        -..++|.|+.|
T Consensus         5 ~~vP~v~g~s~~~A~~~L~~~--gl~~~v~G~G~~V~~QsP~~G~~v~~g~~V~L~T~   60 (61)
T d1pyya1           5 YPMPSVKDISPGDLAEELRRN--LVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSD   60 (61)
T ss_dssp             CBCCCCSSCCHHHHHHHHHHT--TCEEEEESSCSSEEEESSCTTCBCCTTCEEEEEES
T ss_pred             ccCCcccCCCHHHHHHHHHHC--CCeEEEecCCCEEEEEccCCCcccCCCCEEEEEeC
Confidence            457999999999999998887  6677888777655321        23467777765