Citrus Sinensis ID: 033095

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSEN
cccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHc
cccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEEcccccccHHHHHHHEccccHcccccccccccHcHHHHHHHHHHHHHHHHcc
MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKywqhpgdvegfGQAFVVSeeqkldwagifsmitlpvhqrkphlfpklppslrfSLFVLDMdlqaksen
MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSEN
MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSEN
*************LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDM********
**************AKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKK***********FGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE*
**********DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSEN
*****YEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSEN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query127 2.2.26 [Sep-21-2011]
Q39224 358 Protein SRG1 OS=Arabidops yes no 0.968 0.343 0.617 2e-40
D4N500 364 Thebaine 6-O-demethylase N/A no 0.803 0.280 0.647 4e-35
D4N501 364 Probable 2-oxoglutarate/F N/A no 0.803 0.280 0.647 1e-34
D4N502 360 Codeine O-demethylase OS= N/A no 0.897 0.316 0.568 2e-33
A2A1A0 352 S-norcoclaurine synthase N/A no 0.960 0.346 0.467 6e-25
Q96323 356 Leucoanthocyanidin dioxyg no no 0.740 0.264 0.343 4e-11
P51091 357 Leucoanthocyanidin dioxyg N/A no 0.724 0.257 0.340 1e-10
P51093 362 Leucoanthocyanidin dioxyg no no 0.716 0.251 0.365 1e-10
Q7XZQ8 365 Flavone synthase OS=Petro N/A no 0.763 0.265 0.309 3e-10
O04274 362 Leucoanthocyanidin dioxyg N/A no 0.732 0.256 0.326 7e-10
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/123 (61%), Positives = 95/123 (77%)

Query: 1   MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKY 60
           M+ L    +MDSE+ KLDFACKEWGFFQLVNHG+ S+FL+KVK +++ FFNL MEEKKK+
Sbjct: 58  MKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKF 117

Query: 61  WQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMD 120
           WQ P ++EGFGQAFVVSE+QKLDWA +F     PV  RKPHLFPKLP   R +L +   +
Sbjct: 118 WQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSE 177

Query: 121 LQA 123
           +Q+
Sbjct: 178 VQS 180

Arabidopsis thaliana (taxid: 3702)
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|P51093|LDOX_VITVI Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query127
225463356 354 PREDICTED: protein SRG1 [Vitis vinifera] 0.937 0.336 0.697 3e-41
224061385 355 predicted protein [Populus trichocarpa] 0.960 0.343 0.663 8e-41
297740621181 unnamed protein product [Vitis vinifera] 0.889 0.624 0.730 9e-41
225462507 366 PREDICTED: protein SRG1 [Vitis vinifera] 0.937 0.325 0.655 5e-39
255575141 364 Leucoanthocyanidin dioxygenase, putative 0.897 0.313 0.675 6e-39
224061381 359 predicted protein [Populus trichocarpa] 0.897 0.317 0.657 9e-39
15219988 358 protein SRG1 [Arabidopsis thaliana] gi|7 0.968 0.343 0.617 2e-38
224061027 362 predicted protein [Populus trichocarpa] 0.897 0.314 0.666 2e-38
297844634 358 hypothetical protein ARALYDRAFT_889094 [ 0.968 0.343 0.609 4e-38
297803592 356 oxidoreductase [Arabidopsis lyrata subsp 0.897 0.320 0.675 1e-37
>gi|225463356|ref|XP_002271080.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 98/119 (82%)

Query: 4   LLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQH 63
           L+  +SMDSEL KL +ACKEWGFFQL NHGVIS  +EKVK +V+ FFNL MEEKKK+WQ 
Sbjct: 63  LVSGDSMDSELDKLHYACKEWGFFQLTNHGVISTLVEKVKVEVQEFFNLPMEEKKKFWQQ 122

Query: 64  PGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQ 122
           P D++GFGQAFVVSEEQKLDWA +F MITLP + RKPHLFPKLP SLR SL +  ++L+
Sbjct: 123 PEDLQGFGQAFVVSEEQKLDWADMFYMITLPTYLRKPHLFPKLPISLRDSLEIYAVELR 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061385|ref|XP_002300453.1| predicted protein [Populus trichocarpa] gi|222847711|gb|EEE85258.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297740621|emb|CBI30803.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225462507|ref|XP_002269087.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297740615|emb|CBI30797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575141|ref|XP_002528475.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223532084|gb|EEF33892.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15219988|ref|NP_173145.1| protein SRG1 [Arabidopsis thaliana] gi|75220747|sp|Q39224.1|SRG1_ARATH RecName: Full=Protein SRG1; Short=AtSRG1; AltName: Full=Protein SENESCENCE-RELATED GENE 1 gi|5734767|gb|AAD50032.1|AC007651_27 SRG1 Protein [Arabidopsis thaliana] gi|479047|emb|CAA55654.1| SRG1 [Arabidopsis thaliana] gi|15081819|gb|AAK82564.1| F6I1.30/F6I1.30 [Arabidopsis thaliana] gi|22655018|gb|AAM98100.1| At1g17020/F6I1.30 [Arabidopsis thaliana] gi|332191410|gb|AEE29531.1| protein SRG1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224061027|ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|222847580|gb|EEE85127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297844634|ref|XP_002890198.1| hypothetical protein ARALYDRAFT_889094 [Arabidopsis lyrata subsp. lyrata] gi|297336040|gb|EFH66457.1| hypothetical protein ARALYDRAFT_889094 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297803592|ref|XP_002869680.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297315516|gb|EFH45939.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query127
TAIR|locus:2020407 358 SRG1 "senescence-related gene 0.968 0.343 0.617 7.8e-39
TAIR|locus:2122669 356 AT4G25300 [Arabidopsis thalian 0.968 0.345 0.609 1.7e-36
TAIR|locus:2122679 353 AT4G25310 [Arabidopsis thalian 0.944 0.339 0.617 7.2e-36
TAIR|locus:2020422 361 AT1G17010 [Arabidopsis thalian 0.897 0.315 0.622 8.3e-35
TAIR|locus:2202980 356 AT1G78550 [Arabidopsis thalian 0.897 0.320 0.587 2.5e-33
TAIR|locus:2089428 364 LBO1 "LATERAL BRANCHING OXIDOR 0.779 0.271 0.465 2.1e-22
TAIR|locus:2042942 353 AT2G38240 [Arabidopsis thalian 0.724 0.260 0.445 2e-18
TAIR|locus:2010242 348 AT1G49390 [Arabidopsis thalian 0.826 0.301 0.383 1.3e-16
TAIR|locus:2154744 349 AT5G54000 [Arabidopsis thalian 0.944 0.343 0.368 1.7e-16
TAIR|locus:2149907 349 AT5G20550 [Arabidopsis thalian 0.881 0.320 0.377 1.1e-15
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 76/123 (61%), Positives = 95/123 (77%)

Query:     1 MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKY 60
             M+ L    +MDSE+ KLDFACKEWGFFQLVNHG+ S+FL+KVK +++ FFNL MEEKKK+
Sbjct:    58 MKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKF 117

Query:    61 WQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMD 120
             WQ P ++EGFGQAFVVSE+QKLDWA +F     PV  RKPHLFPKLP   R +L +   +
Sbjct:   118 WQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSE 177

Query:   121 LQA 123
             +Q+
Sbjct:   178 VQS 180
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009830 "cell wall modification involved in abscission" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010260 "organ senescence" evidence=IEP;RCA
GO:0016682 "oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor" evidence=ISS
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154744 AT5G54000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149907 AT5G20550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
PLN02216 357 PLN02216, PLN02216, protein SRG1 3e-57
PLN02758 361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-24
PLN02393 362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 5e-24
PLN00417 348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-22
PLN03178 360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 6e-19
PLN02704 335 PLN02704, PLN02704, flavonol synthase 2e-12
PLN02750 345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-11
PLN02639 337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-11
PLN02254 358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 6e-11
PLN02947 374 PLN02947, PLN02947, oxidoreductase 8e-11
PLN02299 321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-10
PLN02515 358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 5e-10
PLN02276 361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-09
COG3491 322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-09
PLN02984 341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-08
PLN02365 300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-07
PLN02904 357 PLN02904, PLN02904, oxidoreductase 1e-07
PLN02403 303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-07
PLN02912 348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-07
PTZ00273 320 PTZ00273, PTZ00273, oxidase reductase; Provisional 5e-07
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-06
PLN02485 329 PLN02485, PLN02485, oxidoreductase 1e-06
PLN03001 262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-05
PLN03002 332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 5e-05
PLN02997 325 PLN02997, PLN02997, flavonol synthase 6e-05
PLN02156 335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-04
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information 
 Score =  180 bits (459), Expect = 3e-57
 Identities = 76/114 (66%), Positives = 91/114 (79%)

Query: 1   MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKY 60
           M+ L    +MDSE+ KLDFACKEWGFFQLVNHG+ S+FL+KVK +++ FFNL MEEKKK 
Sbjct: 58  MKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKL 117

Query: 61  WQHPGDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSL 114
           WQ PG++EGFGQAFVVSE+QKLDWA +F +   PV  RKPHLFPKLP   R +L
Sbjct: 118 WQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTL 171

Length = 357
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 127
PLN02216 357 protein SRG1 100.0
PLN02758 361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.98
PLN02515 358 naringenin,2-oxoglutarate 3-dioxygenase 99.97
COG3491 322 PcbC Isopenicillin N synthase and related dioxygen 99.97
PLN02393 362 leucoanthocyanidin dioxygenase like protein 99.97
PLN00417 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.97
KOG0143 322 consensus Iron/ascorbate family oxidoreductases [S 99.97
PLN02276 361 gibberellin 20-oxidase 99.97
PLN03178 360 leucoanthocyanidin dioxygenase; Provisional 99.97
PLN02254 358 gibberellin 3-beta-dioxygenase 99.97
PTZ00273 320 oxidase reductase; Provisional 99.97
PLN02750 345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.96
PLN02485 329 oxidoreductase 99.96
PLN02947 374 oxidoreductase 99.96
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.96
PLN02912 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.96
PLN03002 332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.96
PLN02904 357 oxidoreductase 99.96
PLN02997 325 flavonol synthase 99.96
PLN02299 321 1-aminocyclopropane-1-carboxylate oxidase 99.96
PLN02704 335 flavonol synthase 99.95
PLN02639 337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.95
PLN02403 303 aminocyclopropanecarboxylate oxidase 99.94
PLN02156 335 gibberellin 2-beta-dioxygenase 99.94
PLN02365 300 2-oxoglutarate-dependent dioxygenase 99.92
PLN02984 341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.89
PLN03001 262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.58
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=8.5e-33  Score=205.12  Aligned_cols=126  Identities=60%  Similarity=1.059  Sum_probs=105.4

Q ss_pred             CCCccCccchHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccccccCccc
Q 033095            1 MQSLLYEESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQ   80 (127)
Q Consensus         1 ~~~l~~~~~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~~~~~GY~~~~~~~~~~   80 (127)
                      |+.|.+++.+.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++...+...+||+........+
T Consensus        58 ls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~  137 (357)
T PLN02216         58 MKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQ  137 (357)
T ss_pred             ChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccc
Confidence            34455555445678889999999999999999999999999999999999999999999976555678997655434456


Q ss_pred             cccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095           81 KLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE  126 (127)
Q Consensus        81 ~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~  126 (127)
                      ..||+|.|.+...|.....+|.||+.+++||+++++|+.+|.+|+.
T Consensus       138 ~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~  183 (357)
T PLN02216        138 KLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAK  183 (357)
T ss_pred             cCCceeeeeeeccCcccccchhcccchHHHHHHHHHHHHHHHHHHH
Confidence            6799999987765654556899999899999999999999999985

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
2brt_A 355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-12
1gp5_A 356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-12
1gp4_A 356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-11
1w9y_A 319 The Structure Of Acc Oxidase Length = 319 1e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 14  LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYW--QHPGDVEGFG 71
           + +L  A  +WG   L+NHG+ +  +E+VKK  + FF+LS+EEK+KY   Q  G ++G+G
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125
Query: 72  QAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLP 107
                +   +L+W   F  +  P  +R   ++PK P
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 161
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-41
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-37
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-20
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 1e-14
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-13
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-12
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  139 bits (353), Expect = 1e-41
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 7   EESMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYW--QHP 64
           E+  ++ + +L  A  +WG   L+NHG+ +  +E+VKK  + FF+LS+EEK+KY   Q  
Sbjct: 60  EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQAT 119

Query: 65  GDVEGFGQAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLR 111
           G ++G+G     +   +L+W   F  +  P  +R   ++PK P    
Sbjct: 120 GKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYI 166
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query127
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 99.98
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 99.97
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 99.96
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 99.96
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 99.95
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 99.94
4ay7_A348 Methylcobalamin\: coenzyme M methyltransferase; TI 83.12
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=99.98  E-value=3.2e-32  Score=201.14  Aligned_cols=126  Identities=26%  Similarity=0.537  Sum_probs=106.7

Q ss_pred             CCCccCcc--chHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCC--CCcccccccccc
Q 033095            1 MQSLLYEE--SMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHP--GDVEGFGQAFVV   76 (127)
Q Consensus         1 ~~~l~~~~--~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~--~~~~GY~~~~~~   76 (127)
                      |+.|.+++  .|.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++....  ..++||+.....
T Consensus        52 ls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~  131 (356)
T 1gp6_A           52 LKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLAN  131 (356)
T ss_dssp             CTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCC
T ss_pred             chhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCccc
Confidence            35565554  25677888999999999999999999999999999999999999999999997654  357899877655


Q ss_pred             CccccccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095           77 SEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE  126 (127)
Q Consensus        77 ~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~  126 (127)
                      ...+..||+|+|+++..|.....+|.||+.+|+||+++++|+++|.+|+.
T Consensus       132 ~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~  181 (356)
T 1gp6_A          132 NASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT  181 (356)
T ss_dssp             STTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHH
Confidence            55667899999998866643346789999999999999999999999985
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 127
d1dcsa_ 311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-16
d1w9ya1 307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 4e-15
d1gp6a_ 349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-14
d1odma_ 329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-10
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 70.8 bits (172), Expect = 3e-16
 Identities = 15/100 (15%), Positives = 25/100 (25%)

Query: 12  SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFG 71
               +     ++ G F L + G+    L+  K  V  FF    E +K+    P      G
Sbjct: 17  LHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76

Query: 72  QAFVVSEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLR 111
              + SE                 +               
Sbjct: 77  FTGLESESTAQITNTGSYSDYSMCYSMGTADNLFPSGDFE 116
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query127
d1gp6a_ 349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 99.95
d1w9ya1 307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 99.95
d1dcsa_ 311 Deacetoxycephalosporin C synthase {Streptomyces cl 99.91
d1odma_ 329 Isopenicillin N synthase {Emericella nidulans [Tax 99.88
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1.4e-28  Score=178.93  Aligned_cols=126  Identities=26%  Similarity=0.537  Sum_probs=99.7

Q ss_pred             CCCccCcc--chHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCC--CCcccccccccc
Q 033095            1 MQSLLYEE--SMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHP--GDVEGFGQAFVV   76 (127)
Q Consensus         1 ~~~l~~~~--~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~--~~~~GY~~~~~~   76 (127)
                      |+.|.++|  .|++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++....  ..+.||+.....
T Consensus        51 ls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~  130 (349)
T d1gp6a_          51 LKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLAN  130 (349)
T ss_dssp             CTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCC
T ss_pred             ChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCcccccccccc
Confidence            46677766  26678888999999999999999999999999999999999999999999987542  233455544444


Q ss_pred             CccccccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095           77 SEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE  126 (127)
Q Consensus        77 ~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~  126 (127)
                      ......+|.+.+.....+.....+|.||..++.|++.+++|+++|..|++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~  180 (349)
T d1gp6a_         131 NASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT  180 (349)
T ss_dssp             STTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhcccccccccccccccccccchHHHHHHHHHHHHHHHHH
Confidence            45556677776544333433446789999999999999999999999985
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure