Citrus Sinensis ID: 033206

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHEEEEEcccEEEccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccc
Coil and Loop (DISEMBL)
mnifrlagDMTHLASVLVLLLKIHTikscsgvslktQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRyftephyvhwipWISGLVQTLLYADFFYYYFDswknnknlqlpa
Flexible Loop (DISEMBL)
mnifrlagdmTHLASVLVLLLKIHTIkscsgvslktQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSwknnknlqlpa
Low Complexity Region (SEG)
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADffyyyfDSWKNNKNLQLPA
Disordered region (IsUnstruct)
**IFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKN********
Disordered Region (DISOPRED)
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLP*
Disordered Region (DISEMBL)
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA
Disordered Region (DISPRO)
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLP*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRLMFSVIVEIAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q9ZTN2	215	ER lumen protein retainin	N/A	no	0.464	0.269	0.931	2e-24
P35402	215	ER lumen protein retainin	no	no	0.464	0.269	0.775	4e-20
Q5U305	212	ER lumen protein retainin	yes	no	0.456	0.268	0.637	4e-16
Q9CQM2	212	ER lumen protein retainin	yes	no	0.456	0.268	0.637	4e-16
Q2KJ37	212	ER lumen protein retainin	yes	no	0.456	0.268	0.637	4e-16
P33947	212	ER lumen protein retainin	yes	no	0.456	0.268	0.637	4e-16
Q5ZKX9	212	ER lumen protein retainin	yes	no	0.456	0.268	0.637	5e-16
Q8R1L4	214	ER lumen protein retainin	no	no	0.648	0.378	0.493	8e-16
Q7ZXS5	212	ER lumen protein retainin	N/A	no	0.552	0.325	0.513	1e-15
Q6PEH1	212	ER lumen protein retainin	yes	no	0.648	0.382	0.493	1e-15

>sp|Q9ZTN2|ERD2_PETHY ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 57/58 (98%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRLAGDMTHLASVLVLLLKIHTIKSC+GVSLKTQELYALVF TRYLDIFTDF+S+
Sbjct: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.
Petunia hybrida (taxid: 4102)

>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 53/58 (91%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFR AGDM+HL SVL+LLLKI+  KSC+G+SLKTQELYALVF TRYLD+FTD+VS+
Sbjct: 1  MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5U305|ERD22_RAT ER lumen protein retaining receptor 2 OS=Rattus norvegicus GN=Kdelr2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+
Sbjct: 1  MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Rattus norvegicus (taxid: 10116)

>sp|Q9CQM2|ERD22_MOUSE ER lumen protein retaining receptor 2 OS=Mus musculus GN=Kdelr2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+
Sbjct: 1  MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Mus musculus (taxid: 10090)

>sp|Q2KJ37|ERD22_BOVIN ER lumen protein retaining receptor 2 OS=Bos taurus GN=KDELR2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+
Sbjct: 1  MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Bos taurus (taxid: 9913)

>sp|P33947|ERD22_HUMAN ER lumen protein retaining receptor 2 OS=Homo sapiens GN=KDELR2 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+
Sbjct: 1  MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Homo sapiens (taxid: 9606)

>sp|Q5ZKX9|ERD22_CHICK ER lumen protein retaining receptor 2 OS=Gallus gallus GN=KDELR2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+
Sbjct: 1  MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLFTSFISL 58

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Gallus gallus (taxid: 9031)

>sp|Q8R1L4|ERD23_MOUSE ER lumen protein retaining receptor 3 OS=Mus musculus GN=Kdelr3 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
          MN+FR+ GD++HL ++++LL+KI   KSC+G+S K+Q L+ALVFTTRYLD+F++F+SI  
Sbjct: 1  MNVFRILGDLSHLLAMILLLVKIWRSKSCAGISGKSQILFALVFTTRYLDLFSNFISIYN 60

Query: 59 RLMFSVIVEIAYRGLYILNWVYR 81
           +M  V +  AY  +Y++ W +R
Sbjct: 61 TVMKVVFLLCAYVTVYMIYWKFR 83

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Mus musculus (taxid: 10090)

>sp|Q7ZXS5|ERD22_XENLA ER lumen protein retaining receptor 2 OS=Xenopus laevis GN=kdelr2 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 58/72 (80%), Gaps = 3/72 (4%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL 60
          MN+FRL+GD+ HLA++++LLLKI   +SC+G+S K+Q L+A+VFTTRYLD+FT F+S   
Sbjct: 1  MNVFRLSGDLCHLAAIIILLLKIWNSRSCAGISGKSQLLFAMVFTTRYLDLFTSFIS--- 57

Query: 61 MFSVIVEIAYRG 72
          +++  +++ Y G
Sbjct: 58 LYNTSMKVIYMG 69

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus laevis (taxid: 8355)

>sp|Q6PEH1|ERD22_DANRE ER lumen protein retaining receptor 2 OS=Danio rerio GN=kdelr2 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 61/83 (73%), Gaps = 2/83 (2%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
          MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+ T F+S+  
Sbjct: 1  MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQILFALVFTTRYLDLLTSFISLYN 60

Query: 59 RLMFSVIVEIAYRGLYILNWVYR 81
            M  + +  AY  +Y++   +R
Sbjct: 61 TCMKVIYIGCAYATVYLIYAKFR 83

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
359806616	215	uncharacterized protein LOC100780011 pre	0.456	0.265	0.894	1e-24
298205251	414	unnamed protein product [Vitis vinifera]	0.464	0.140	0.862	3e-24
449453278	215	PREDICTED: ER lumen protein retaining re	0.432	0.251	0.859	5e-24
351722158	215	uncharacterized protein LOC100527553 [Gl	0.432	0.251	0.877	7e-24
255554088	206	er lumen protein retaining receptor, put	0.456	0.276	0.894	8e-24
359477883	215	PREDICTED: ER lumen protein retaining re	0.432	0.251	0.877	9e-24
21592401	215	ER lumen retaining receptor (HDEL recept	0.456	0.265	0.859	1e-23
9293986	217	ER lumen protein-retaining receptor-like	0.456	0.262	0.859	1e-23
18404390	215	ER lumen protein retaining receptor [Ara	0.456	0.265	0.859	1e-23
297790580	215	hypothetical protein ARALYDRAFT_333020 [	0.456	0.265	0.842	1e-23

>gi|359806616|ref|NP_001241529.1| uncharacterized protein LOC100780011 precursor [Glycine max] gi|255638536|gb|ACU19576.1| unknown [Glycine max] gi|255639213|gb|ACU19905.1| unknown [Glycine max]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 53/57 (92%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           AYRGLYILNW+YRYFTEPH+VHWI WISGLVQTLLYADFFYYYF SWKNNK L LPA
Sbjct: 159 AYRGLYILNWIYRYFTEPHFVHWITWISGLVQTLLYADFFYYYFQSWKNNKKLHLPA 215

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298205251|emb|CBI17310.3| unnamed protein product [Vitis vinifera]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 53/58 (91%)

Query: 68  IAYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           +AYR LYILNW+YRYFTEPHYVHWI WISGLVQTLLYADFFYYYF SWKNN+ L LPA
Sbjct: 357 VAYRALYILNWIYRYFTEPHYVHWITWISGLVQTLLYADFFYYYFHSWKNNEKLHLPA 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453278|ref|XP_004144385.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus] gi|449506093|ref|XP_004162650.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis sativus]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 53/57 (92%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           AYR LYI+NW+YRYFTEPH+VHWI WISGLVQTLLYADFFYYYF SWKNN+ LQLPA
Sbjct: 159 AYRALYIVNWIYRYFTEPHFVHWITWISGLVQTLLYADFFYYYFQSWKNNQKLQLPA 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722158|ref|NP_001237746.1| uncharacterized protein LOC100527553 [Glycine max] gi|255632598|gb|ACU16649.1| unknown [Glycine max]

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 52/57 (91%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           AYR LYILNW+YRYFTEPH+VHWI WISGLVQTLLYADFFYYYF SWKNNK L LPA
Sbjct: 159 AYRALYILNWIYRYFTEPHFVHWITWISGLVQTLLYADFFYYYFQSWKNNKKLHLPA 215

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554088|ref|XP_002518084.1| er lumen protein retaining receptor, putative [Ricinus communis] gi|223542680|gb|EEF44217.1| er lumen protein retaining receptor, putative [Ricinus communis]

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 51/57 (89%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           AYR LYILNWVYRYFTEPHYVHWI WISGLVQTLLYADFFYYYF SWKNN  L LPA
Sbjct: 150 AYRALYILNWVYRYFTEPHYVHWITWISGLVQTLLYADFFYYYFQSWKNNVKLHLPA 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477883|ref|XP_002266203.2| PREDICTED: ER lumen protein retaining receptor-like [Vitis vinifera]

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 52/57 (91%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           AYR LYILNW+YRYFTEPHYVHWI WISGLVQTLLYADFFYYYF SWKNN+ L LPA
Sbjct: 159 AYRALYILNWIYRYFTEPHYVHWITWISGLVQTLLYADFFYYYFHSWKNNEKLHLPA 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592401|gb|AAM64352.1| ER lumen retaining receptor (HDEL receptor), putative [Arabidopsis thaliana]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 52/57 (91%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
            YRGLYILNW+YRYFTEPH+VHWI WI+G VQTLLYADFFYYYF SWKNNK LQLPA
Sbjct: 159 GYRGLYILNWIYRYFTEPHFVHWITWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9293986|dbj|BAB01889.1| ER lumen protein-retaining receptor-like protein [Arabidopsis thaliana]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 52/57 (91%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
            YRGLYILNW+YRYFTEPH+VHWI WI+G VQTLLYADFFYYYF SWKNNK LQLPA
Sbjct: 161 GYRGLYILNWIYRYFTEPHFVHWITWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 217

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404390|ref|NP_566758.1| ER lumen protein retaining receptor [Arabidopsis thaliana] gi|17380930|gb|AAL36277.1| putative ER lumen-retaining receptor (HDEL receptor) protein [Arabidopsis thaliana] gi|18369697|emb|CAC81064.1| endoplasmic reticulum retrieval receptor 2 [Arabidopsis thaliana] gi|23296793|gb|AAN13171.1| putative ER lumen-retaining receptor (HDEL receptor) protein [Arabidopsis thaliana] gi|332643450|gb|AEE76971.1| ER lumen protein retaining receptor [Arabidopsis thaliana]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 52/57 (91%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
            YRGLYILNW+YRYFTEPH+VHWI WI+G VQTLLYADFFYYYF SWKNNK LQLPA
Sbjct: 159 GYRGLYILNWIYRYFTEPHFVHWITWIAGFVQTLLYADFFYYYFLSWKNNKKLQLPA 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297790580|ref|XP_002863175.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata] gi|297309009|gb|EFH39434.1| hypothetical protein ARALYDRAFT_333020 [Arabidopsis lyrata subsp. lyrata]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 51/57 (89%)

Query: 69  AYRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
            YRG YILNW+YRYFTEPH+VHWI WI+GLVQT LYADFFYYYF SWKNNK LQLPA
Sbjct: 159 GYRGFYILNWIYRYFTEPHFVHWITWIAGLVQTFLYADFFYYYFQSWKNNKKLQLPA 215

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
UNIPROTKB|E1C2R0	214	KDELR3 "ER lumen protein retai	0.648	0.378	0.518	8.4e-28
UNIPROTKB|Q5ZKX9	212	KDELR2 "ER lumen protein retai	0.608	0.358	0.512	4.5e-27
UNIPROTKB|F1N840	212	KDELR2 "ER lumen protein retai	0.608	0.358	0.5	7.4e-27
UNIPROTKB|Q2KJ37	212	KDELR2 "ER lumen protein retai	0.608	0.358	0.512	9.4e-27
UNIPROTKB|E2QXL5	212	KDELR2 "ER lumen protein retai	0.608	0.358	0.512	9.4e-27
MGI|MGI:1914163	212	Kdelr2 "KDEL (Lys-Asp-Glu-Leu)	0.608	0.358	0.512	9.4e-27
RGD|1304618	212	Kdelr2 "KDEL (Lys-Asp-Glu-Leu)	0.608	0.358	0.512	9.4e-27
UNIPROTKB|Q5U305	212	Kdelr2 "ER lumen protein retai	0.608	0.358	0.512	9.4e-27
FB|FBgn0022268	212	KdelR "KDEL receptor" [Drosoph	0.608	0.358	0.448	9.4e-27
UNIPROTKB|P33947	212	KDELR2 "ER lumen protein retai	0.608	0.358	0.512	1.5e-26

UNIPROTKB|E1C2R0 KDELR3 "ER lumen protein retaining receptor" [Gallus gallus (taxid:9031)]

 Score = 212 (79.7 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 43/83 (51%), Positives = 63/83 (75%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-R 59
             MNIFR+ GD++HL ++++LL+KIH  KSC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRILGDVSHLLAIIILLVKIHRSKSCAGISGKSQILFALVFTTRYLDLFTTFISLYN 60

Query:    60 LMFSVIVEI-AYRGLYILNWVYR 81
              +  VI  I AY  +Y++   +R
Sbjct:    61 TVMKVIFLICAYITVYMIYVKFR 83

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5ZKX9 KDELR2 "ER lumen protein retaining receptor 2" [Gallus gallus (taxid:9031)]

 Score = 210 (79.0 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|F1N840 KDELR2 "ER lumen protein retaining receptor" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 39/78 (50%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA+++++LLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIIIMLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q2KJ37 KDELR2 "ER lumen protein retaining receptor 2" [Bos taurus (taxid:9913)]

 Score = 210 (79.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0006621 "protein retention in ER lumen" evidence=IEA

UNIPROTKB|E2QXL5 KDELR2 "ER lumen protein retaining receptor" [Canis lupus familiaris (taxid:9615)]

 Score = 210 (79.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0006621 "protein retention in ER lumen" evidence=IEA

MGI|MGI:1914163 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2" [Mus musculus (taxid:10090)]

 Score = 210 (79.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005801 "cis-Golgi network" evidence=ISO

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

RGD|1304618 Kdelr2 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 210 (79.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

UNIPROTKB|Q5U305 Kdelr2 "ER lumen protein retaining receptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 210 (79.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSI-- 58
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    59 RLMFSVIVEIAYRGLYIL 76
               M  + +  +Y  +Y++
Sbjct:    61 TSMKLIYIACSYATVYLI 78

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 182 (69.1 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 35/78 (44%), Positives = 58/78 (74%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL 60
             MNIFR AGD++H+ ++++LLLKI   +SC+G+S K+Q L+A+V+ TRYLD+FT +VS+  
Sbjct:     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN 60

Query:    61 MFSVIVEIAYRG--LYIL 76
                 ++ +A  G  +Y++
Sbjct:    61 SVMKVLFLATSGATVYLM 78

GO:0030140 "trans-Golgi network transport vesicle" evidence=ISS;NAS

GO:0005046 "KDEL sequence binding" evidence=ISS;NAS

GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=ISS;NAS

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=NAS

GO:0006621 "protein retention in ER lumen" evidence=IEA;NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

UNIPROTKB|P33947 KDELR2 "ER lumen protein retaining receptor 2" [Homo sapiens (taxid:9606)]

 Score = 208 (78.3 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
 Identities = 40/78 (51%), Positives = 60/78 (76%)

Query:     1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL 60
             MNIFRL GD++HLA++++LLLKI   +SC+G+S K+Q L+ALVFTTRYLD+FT F+S+  
Sbjct:     1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query:    61 MFSVIVEIA--YRGLYIL 76
                 ++ +A  Y  +Y++
Sbjct:    61 TSMKVIYLACSYATVYLI 78

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005046 "KDEL sequence binding" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=TAS

GO:0006886 "intracellular protein transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZTN2	ERD2_PETHY	No assigned EC number	0.9310	0.464	0.2697	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	125
COG5196	214	COG5196, ERD2, ER lumen protein retaining receptor	2e-14
COG5196	214	COG5196, ERD2, ER lumen protein retaining receptor	7e-09
pfam00810	143	pfam00810, ER_lumen_recept, ER lumen protein retai	8e-09

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion]

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 33/53 (62%), Positives = 40/53 (75%)

Query: 1  MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFT 53
          M+ FR  GD  HLAS+ VL+ KI   +SCSG+SLKTQ LY+LVF TRYLD+F 
Sbjct: 1  MDTFRFLGDFLHLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFD 53

Length = 214

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion]

 Score = 51.4 bits (123), Expect = 7e-09
 Identities = 22/56 (39%), Positives = 29/56 (51%)

Query: 70  YRGLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA 125
           YR LYI  W+ R   +      I   +G+VQTLLY DFF  Y+      K+  LP+
Sbjct: 159 YRALYIPYWILRKVYDIKKTGNIAIAAGIVQTLLYLDFFAIYYRYVFRGKSFSLPS 214

Length = 214

>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor

 Score = 49.9 bits (120), Expect = 8e-09
 Identities = 21/31 (67%), Positives = 27/31 (87%)

Query: 28 SCSGVSLKTQELYALVFTTRYLDIFTDFVSI 58
          SCSG+SLKTQ LYA+VF TRYLD+F  ++S+
Sbjct: 1  SCSGLSLKTQILYAIVFLTRYLDLFEGYISL 31

Length = 143

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
KOG3106	212	consensus ER lumen protein retaining receptor [Int	100.0
COG5196	214	ERD2 ER lumen protein retaining receptor [Intracel	100.0
PF00810	147	ER_lumen_recept: ER lumen protein retaining recept	99.81
PF04193	61	PQ-loop: PQ loop repeat	90.92
smart00679	32	CTNS Repeated motif present between transmembrane	88.79

>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4e-55  Score=341.92  Aligned_cols=124  Identities=56%  Similarity=0.974  Sum_probs=121.9

Q ss_pred             CchhhhhhhhHHHHHHHHHHHHHHhhhhccccccchhHHHHHHHHhhhhhcccchHHHHH--------------------
Q 033206            1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL--------------------   60 (125)
Q Consensus         1 mn~fr~~gd~~hl~s~~iLl~ki~~~kS~~GiSlktQ~ly~~vf~~Ryldl~~~~~s~Yn--------------------   60 (125)
                      ||.||++||++|++|+++|+.||+|+|||+|+|+|||+|||+||++||+|+|+.+.|.||                    
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999998999998                    


Q ss_pred             ----------------------------------------HHHHHHH----------------------------HHHhh
Q 033206           61 ----------------------------------------MFSVIVE----------------------------IAYRG   72 (125)
Q Consensus        61 ----------------------------------------tFSiyLE----------------------------G~yR~   72 (125)
                                                              |||+|||                            |+||+
T Consensus        81 k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~t~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~yR~  160 (212)
T KOG3106|consen   81 KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSFTILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGLYRA  160 (212)
T ss_pred             HHHHHHhcccCceeEEEEehhheeeeeeecCCccHHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHHHHH
Confidence                                                    9999999                            99999


Q ss_pred             hhhhcceeEeeeCCcccchHHhHHHHHHHHHHhhhhheeeeecccCccccCCC
Q 033206           73 LYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA  125 (125)
Q Consensus        73 ly~~~Wi~ry~~~~~~~~~~~i~~givQt~ly~DFfy~Y~~~v~~G~~~~lp~  125 (125)
                      +|++|||+|+.+|+.+ |+++++||+|||++||||||+|+++|++|||++||+
T Consensus       161 ly~~~WI~r~~~e~~~-~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~~~LP~  212 (212)
T KOG3106|consen  161 LYIANWIYRYVTEDFW-DPIAIVAGIVQTVLYADFFYLYVTKVLQGKKLKLPA  212 (212)
T ss_pred             HHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHhHHHHHHHHHHcCCcCCCCC
Confidence            9999999999999987 999999999999999999999999999999999996

>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion]

Probab=100.00  E-value=2.6e-47  Score=295.08  Aligned_cols=125  Identities=47%  Similarity=0.724  Sum_probs=119.6

Q ss_pred             CchhhhhhhhHHHHHHHHHHHHHHhhhhccccccchhHHHHHHHHhhhhhcc-cchHHHHH-------------------
Q 033206            1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIF-TDFVSIRL-------------------   60 (125)
Q Consensus         1 mn~fr~~gd~~hl~s~~iLl~ki~~~kS~~GiSlktQ~ly~~vf~~Ryldl~-~~~~s~Yn-------------------   60 (125)
                      ||.||++||++|++|+.+|++||.++|||+|+|+|||.||++||++||+|++ ++++|+||                   
T Consensus         1 m~~Fr~lGD~~Hlasi~vLih~ik~tr~csGlSlKtq~Ly~lVfitRYldLf~f~~~slYn~lMki~FI~s~~yI~~lm~   80 (214)
T COG5196           1 MDTFRFLGDFLHLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLYNSLMKILFIGSQVYILFLMR   80 (214)
T ss_pred             CcHHHHHhHHHHHHHHHHHHHHhhhcceecceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999 57788888                   


Q ss_pred             -----------------------------------------HHHHHHH----------------------------HHHh
Q 033206           61 -----------------------------------------MFSVIVE----------------------------IAYR   71 (125)
Q Consensus        61 -----------------------------------------tFSiyLE----------------------------G~yR   71 (125)
                                                               |||+|||                            |+||
T Consensus        81 ~~~r~tYdk~lDtF~i~~ll~gsav~slff~~~~tisnvlwtfS~wLESVAILPQL~mLq~~GeteslT~hYvfamgLYR  160 (214)
T COG5196          81 FKYRSTYDKKLDTFNILTLLVGSAVFSLFFTRGGTISNVLWTFSLWLESVAILPQLVMLQEAGETESLTSHYVFAMGLYR  160 (214)
T ss_pred             hcccchHHHhhhhhhhhhhhhhhhhheeeecCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeHHHHHHHHHHHH
Confidence                                                     9999999                            9999


Q ss_pred             hhhhhcceeEeeeCCcccchHHhHHHHHHHHHHhhhhheeeeecccCccccCCC
Q 033206           72 GLYILNWVYRYFTEPHYVHWIPWISGLVQTLLYADFFYYYFDSWKNNKNLQLPA  125 (125)
Q Consensus        72 ~ly~~~Wi~ry~~~~~~~~~~~i~~givQt~ly~DFfy~Y~~~v~~G~~~~lp~  125 (125)
                      ++|++|||+|+..+.+-.+-+++.||++||+||.|||+.|++.|.+||+++||+
T Consensus       161 alYip~wI~r~~~~~kk~~~iai~aGivQTlLY~DFf~iYyr~V~rGk~f~LP~  214 (214)
T COG5196         161 ALYIPYWILRKVYDIKKTGNIAIAAGIVQTLLYLDFFAIYYRYVFRGKSFSLPS  214 (214)
T ss_pred             HhhhhHHHHHhhhcccccccchhHHHHHHHHHHHHhHHhhhhhhhcccccCCCC
Confidence            999999999998885445999999999999999999999999999999999996

>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway

Probab=99.81  E-value=1e-20  Score=142.25  Aligned_cols=33  Identities=64%  Similarity=1.042  Sum_probs=29.6

Q ss_pred             hccccccchhHHHHHHHHhhhhhc--ccchHHHHH
Q 033206           28 SCSGVSLKTQELYALVFTTRYLDI--FTDFVSIRL   60 (125)
Q Consensus        28 S~~GiSlktQ~ly~~vf~~Ryldl--~~~~~s~Yn   60 (125)
                      ||+|+|+|||+||++|+++||+|+  ++.+.+.||
T Consensus         1 S~~GlSlktq~ly~~vf~~Ryldl~~f~~~~s~y~   35 (147)
T PF00810_consen    1 SCSGLSLKTQILYAIVFLTRYLDLFWFESYLSLYN   35 (147)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            899999999999999999999999  666666666

The receptor for this signal is a ~26 kDa Golgi membrane protein, initially identified as the ERD2 gene product in S. cerevisiae. The receptor molecule, known variously as the ER lumen protein retaining receptor or the 'KDEL receptor', is believed to cycle between the cis side of the Golgi apparatus and the ER. It has also been characterised in a number of other species, including plants, Plasmodium, Drosophila and mammals. In mammals, 2 highly related forms of the receptor are known. The KDEL receptor is a highly hydrophobic protein of 220 residues; its sequence exhibits 7 hydrophobic regions, all of which have been suggested to traverse the membrane []. More recently, however, it has been suggested that only 6 of these regions are transmembrane (TM), resulting in both N- and C-termini on the cytoplasmic side of the membrane.; GO: 0046923 ER retention sequence binding, 0006621 protein retention in ER lumen, 0016021 integral to membrane

>PF04193 PQ-loop: PQ loop repeat

Probab=90.92  E-value=0.51  Score=29.41  Aligned_cols=36  Identities=25%  Similarity=0.099  Sum_probs=29.1

Q ss_pred             HHHHHHHHHhhhhccccccchhHHHHHHHHhhhhhc
Q 033206           16 VLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDI   51 (125)
Q Consensus        16 ~~iLl~ki~~~kS~~GiSlktQ~ly~~vf~~Ryldl   51 (125)
                      .+==+.|.+|+||+.|+|..+..+..+..+++-+..
T Consensus        17 ~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~   52 (61)
T PF04193_consen   17 FLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYS   52 (61)
T ss_pred             HHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHH
Confidence            333368899999999999999999998888775543

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=88.79  E-value=0.3  Score=26.86  Aligned_cols=22  Identities=27%  Similarity=0.274  Sum_probs=18.0

Q ss_pred             HHHHHhhhhccccccchhHHHH
Q 033206           20 LLKIHTIKSCSGVSLKTQELYA   41 (125)
Q Consensus        20 l~ki~~~kS~~GiSlktQ~ly~   41 (125)
                      +.|++|+||+.|+|.-...+-.
T Consensus         7 i~~~~~~ks~~glS~~~~~l~~   28 (32)
T smart00679        7 IIKNYRRKSTEGLSILFVLLWL   28 (32)
T ss_pred             HHHHHHcCCcCcCCHHHHHHHH
Confidence            5789999999999987766544

Function unknown, but likely to be associated with the glycosylation machinery.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00