Citrus Sinensis ID: 033236

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFFLF
Secondary Structure (PSIPRED)
ccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHcccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHHHHHHHccccEccccccccHHHcc
Coil and Loop (DISEMBL)
MGKSKVLVVGGTGYIGRRIVKASLAQGhetyvlqrpdigldIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTIsgvhfrshNILMQLKLVDAIREAGNVKkrklnegmipfflf
Flexible Loop (DISEMBL)
MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTIsgvhfrshniLMQLKLVDAIREAGnvkkrklnegmipfflf
Low Complexity Region (SEG)
MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFFLF
Disordered region (IsUnstruct)
*****VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF**
Disordered Region (DISOPRED)
*GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFFLF
Disordered Region (DISEMBL)
MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFFLF
Disordered Region (DISPRO)
**KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFFLF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
P52581	312	Isoflavone reductase homo	N/A	no	0.967	0.384	0.768	2e-48
P52578	308	Isoflavone reductase homo	N/A	no	0.838	0.337	0.468	9e-20
P52577	310	Isoflavone reductase homo	no	no	0.838	0.335	0.477	4e-19
P52580	309	Isoflavone reductase homo	N/A	no	0.838	0.336	0.486	7e-18
E1U332	308	Isoflavone reductase-like	N/A	no	0.838	0.337	0.422	2e-17
P52579	310	Isoflavone reductase homo	N/A	no	0.838	0.335	0.394	2e-17
Q15GI4	314	Eugenol synthase 1 OS=Oci	N/A	no	0.806	0.318	0.431	6e-17
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.846	0.325	0.405	8e-17
Q00016	318	Isoflavone reductase OS=C	N/A	no	0.838	0.327	0.426	3e-16
P52575	318	Isoflavone reductase OS=M	N/A	no	0.830	0.323	0.363	2e-13

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/121 (76%), Positives = 111/121 (91%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           MGKSKVLVVGGTGY+GRRIVKASL  GHET++LQRP+IGLDI+KLQ+LLSFKKQGA L+E
Sbjct: 1   MGKSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
           ASF+DH+SLV+AVK VDVVICT+SGVHFRSHN+L QLKLV+AI++AGN+K+   +E GM 
Sbjct: 61  ASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Lupinus albus (taxid: 3870)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 7/111 (6%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
           GKSK+L +GGTGYIG+ IV+AS   GH+T+VL R     +  K +++ +FK  G   +  
Sbjct: 3   GKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHG 62

Query: 62  SFADHRSLVEAVKRVDVVICTISGVHFRSHNILM-QLKLVDAIREAGNVKK 111
              DH SLV+A+K+VDVVI T+       H +L  Q+KL+ AI+EAGNVK+
Sbjct: 63  DLYDHESLVKAIKQVDVVISTV------GHALLADQVKLIAAIKEAGNVKR 107

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 5/109 (4%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+LV+GGTGYIG+ +V+AS   GH T+ L R     D  K + + SFK  G  ++   
Sbjct: 5   KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             DH SLV+A+K+VDVVI T+      S  IL Q K++ AI+EAGNVK+
Sbjct: 65  LNDHESLVKAIKQVDVVISTVG-----SMQILDQTKIISAIKEAGNVKR 108

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 5/109 (4%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+LVVGGTGY+GR +V AS   GH T  L R     D  K  +L SF+  G  L++  
Sbjct: 5   KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 64

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             D  SLV AVK  DVVI  +      S  I  Q +LVDAI+EAGNVK+
Sbjct: 65  LYDQASLVSAVKGADVVISVLG-----SMQIADQSRLVDAIKEAGNVKR 108

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 5/109 (4%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           K+K+L++GGTGYIG+ IV+AS    H T+ L R     D  K +++  FK  G  ++   
Sbjct: 4   KTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTILTGD 63

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             DH SLV+A+K+VDVVI T+  +         Q+K++ AI+EAGNVK+
Sbjct: 64  LYDHESLVKAIKQVDVVISTVGQLQLAD-----QVKIIAAIKEAGNVKR 107

Olea europaea (taxid: 4146)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 5/109 (4%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L++GGTGYIG+ +V+ S   GH T+ L R     + +K +++ +FK  G  L+   
Sbjct: 6   KSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGD 65

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
            ++  SL++A+K+VDVVI T+ G  F       Q+ ++ AI+EAGN+K+
Sbjct: 66  ISNQESLLKAIKQVDVVISTVGGQQFTD-----QVNIIKAIKEAGNIKR 109

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 9/109 (8%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP+      K  +L  F+  GA +++  
Sbjct: 7   KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGE 62

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +H  LVE +K+VDVVI  ++        IL Q K+++AI+ AGN+K+
Sbjct: 63  LDEHEKLVELMKKVDVVISALAFPQ-----ILDQFKILEAIKVAGNIKR 106

Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 8

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 6/111 (5%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP-DIGLDIDKLQMLLSFKKQGAHLIE 60
           GK K+L++G TGY+G+ +VKAS++ GH TY    P     D  KLQ+L  F+  G  +  
Sbjct: 4   GKGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFY 63

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
              ++H  LV   K VD+VI T++   +     L QLK+++AI+EAGN+K+
Sbjct: 64  GELSEHDKLVAVFKEVDIVISTLAVPQY-----LEQLKVIEAIKEAGNIKR 109

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 9

>sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 18/122 (14%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL------------QMLL 49
            ++++LV+G TG IGR +V AS+  G+ TY L R   G DI+K             ++L 
Sbjct: 3   SQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPG-DINKPSLVAAANPESKEELLQ 61

Query: 50  SFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNV 109
           SFK  G  L+E    DH +LV+A+K+VD VICT     F    IL Q+K++ AI+EAGNV
Sbjct: 62  SFKAAGVILLEGDMNDHEALVKAIKQVDTVICT-----FGRLLILDQVKIIKAIKEAGNV 116

Query: 110 KK 111
           K+
Sbjct: 117 KR 118

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins.

Cicer arietinum (taxid: 3827)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 18/121 (14%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS------------ 50
           ++K+L++G TG IGR IV AS+  G+ TY L R   G +++K +++ +            
Sbjct: 4   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPG-NVNKPKLITAANPETKEELIDN 62

Query: 51  FKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
           ++  G  L+E    DH +LV+A+K+VD+VIC    +         Q+K++ AI+EAGNVK
Sbjct: 63  YQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIED-----QVKIIKAIKEAGNVK 117

Query: 111 K 111
           K
Sbjct: 118 K 118

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
356529761	318	PREDICTED: isoflavone reductase homolog	0.991	0.386	0.790	6e-49
147767744	298	hypothetical protein VITISV_040855 [Viti	0.967	0.402	0.793	4e-48
359491809	347	PREDICTED: isoflavone reductase homolog	0.967	0.345	0.793	5e-48
296088002	312	unnamed protein product [Vitis vinifera]	0.967	0.384	0.793	5e-48
356497599	252	PREDICTED: LOW QUALITY PROTEIN: isoflavo	0.991	0.488	0.739	7e-48
359474654	322	PREDICTED: isoflavone reductase homolog	0.967	0.372	0.785	8e-48
147809704	311	hypothetical protein VITISV_006481 [Viti	0.967	0.385	0.785	1e-47
116077990	313	pinoresinol-lariciresinol reductase homo	0.951	0.376	0.798	1e-47
225427409	312	PREDICTED: isoflavone reductase homolog	0.967	0.384	0.776	2e-47
224074410	309	phenylcoumaran benzylic ether reductase	0.967	0.388	0.793	2e-47

>gi|356529761|ref|XP_003533456.1| PREDICTED: isoflavone reductase homolog [Glycine max]

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 98/124 (79%), Positives = 113/124 (91%), Gaps = 1/124 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           MGKSKVLVVGGTGY+GRRIVKASL QGHETYVLQRP+IGLDI+K+QMLLSFKKQGAHL+E
Sbjct: 1   MGKSKVLVVGGTGYVGRRIVKASLEQGHETYVLQRPEIGLDIEKVQMLLSFKKQGAHLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
           AS +DH+SLVEAVK VDVVICT+SGVHFRSHN+L+QLKLV+AI+ AGNVK+   +E GM 
Sbjct: 61  ASVSDHQSLVEAVKLVDVVICTMSGVHFRSHNLLVQLKLVEAIKAAGNVKRFLPSEFGMD 120

Query: 120 PFFL 123
           P  +
Sbjct: 121 PALM 124

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767744|emb|CAN76230.1| hypothetical protein VITISV_040855 [Vitis vinifera]

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 111/121 (91%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+VKASLAQGH T+VLQRP+IGLDI+KLQMLLSFK +GA L+E
Sbjct: 1   MEKSKVLVVGGTGYIGRRMVKASLAQGHPTFVLQRPEIGLDIEKLQMLLSFKAKGATLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            SFADH+SLVEAVK+VDVVICT+SGVHFRSHNIL+QLKLV+AI+EAGN+K+   +E GM 
Sbjct: 61  GSFADHKSLVEAVKKVDVVICTMSGVHFRSHNILLQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491809|ref|XP_002266147.2| PREDICTED: isoflavone reductase homolog [Vitis vinifera]

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 111/121 (91%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+VKASLAQGH T+VLQRP+IGLDI+KLQMLLSFK +GA L+E
Sbjct: 36  MEKSKVLVVGGTGYIGRRMVKASLAQGHPTFVLQRPEIGLDIEKLQMLLSFKAKGATLVE 95

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            SFADH+SLVEAVK+VDVVICT+SGVHFRSHNIL+QLKLV+AI+EAGN+K+   +E GM 
Sbjct: 96  GSFADHKSLVEAVKKVDVVICTMSGVHFRSHNILLQLKLVEAIKEAGNIKRFLPSEFGMD 155

Query: 120 P 120
           P
Sbjct: 156 P 156

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088002|emb|CBI35285.3| unnamed protein product [Vitis vinifera]

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 111/121 (91%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+VKASLAQGH T+VLQRP+IGLDI+KLQMLLSFK +GA L+E
Sbjct: 1   MEKSKVLVVGGTGYIGRRMVKASLAQGHPTFVLQRPEIGLDIEKLQMLLSFKAKGATLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            SFADH+SLVEAVK+VDVVICT+SGVHFRSHNIL+QLKLV+AI+EAGN+K+   +E GM 
Sbjct: 61  GSFADHKSLVEAVKKVDVVICTMSGVHFRSHNILLQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497599|ref|XP_003517647.1| PREDICTED: LOW QUALITY PROTEIN: isoflavone reductase homolog [Glycine max]

 Score =  194 bits (492), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/123 (73%), Positives = 111/123 (90%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           MGKSKVLVVGGTGY+GRRIVKASL QGHETYVLQRP+IGLDI+ +QMLLSFKKQGAHL+E
Sbjct: 1   MGKSKVLVVGGTGYVGRRIVKASLEQGHETYVLQRPEIGLDIEMMQMLLSFKKQGAHLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120
           AS +DH++LVEAVK VDVVICT+SGVHF SHN+L+QLKLV+AI+ AGN+K +++ + M  
Sbjct: 61  ASVSDHQNLVEAVKLVDVVICTMSGVHFLSHNLLVQLKLVEAIKAAGNIKTKQVADAMTM 120

Query: 121 FFL 123
            ++
Sbjct: 121 HWM 123

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474654|ref|XP_002264222.2| PREDICTED: isoflavone reductase homolog [Vitis vinifera]

 Score =  194 bits (492), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 110/121 (90%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+VKASLAQGH T+VLQRP+IG+DIDKLQMLLSFK +GA L+E
Sbjct: 12  MEKSKVLVVGGTGYIGRRMVKASLAQGHPTFVLQRPEIGMDIDKLQMLLSFKAKGATLVE 71

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            S ADH+SLVEAVK+VDVVICT+SGVHFRSHN+L+QLKLVDAI+EAGN+K+   +E GM 
Sbjct: 72  GSVADHKSLVEAVKKVDVVICTMSGVHFRSHNLLLQLKLVDAIKEAGNIKRFLPSEFGMD 131

Query: 120 P 120
           P
Sbjct: 132 P 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147809704|emb|CAN62384.1| hypothetical protein VITISV_006481 [Vitis vinifera]

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 110/121 (90%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+VKASLAQGH T+VLQRP+IG+DIDKLQMLLSFK +GA L+E
Sbjct: 1   MEKSKVLVVGGTGYIGRRMVKASLAQGHPTFVLQRPEIGMDIDKLQMLLSFKAKGATLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            S ADH+SLVEAVK+VDVVICT+SGVHFRSHN+L+QLKLVDAI+EAGN+K+   +E GM 
Sbjct: 61  GSVADHKSLVEAVKKVDVVICTMSGVHFRSHNLLLQLKLVDAIKEAGNIKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116077990|dbj|BAF34846.1| pinoresinol-lariciresinol reductase homolog [Lotus japonicus]

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 110/119 (92%), Gaps = 1/119 (0%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSKVLVVGGTGYIGRRIV+AS+ QGHETYVLQRPDIGLD++K+QML+SFKKQGA L+EAS
Sbjct: 4   KSKVLVVGGTGYIGRRIVRASIEQGHETYVLQRPDIGLDVEKVQMLVSFKKQGARLVEAS 63

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMIP 120
           F+DH+SLV+AVK VDVVICT+SGVHFRSHNILMQLKLV+AI+ AGNVK+   +E GM P
Sbjct: 64  FSDHQSLVDAVKLVDVVICTMSGVHFRSHNILMQLKLVEAIKAAGNVKRFLPSEFGMDP 122

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427409|ref|XP_002264082.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|147818481|emb|CAN69630.1| hypothetical protein VITISV_028545 [Vitis vinifera]

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 111/121 (91%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRR+V+ASLAQGH T+VLQRP+IG+DI+KLQMLLSFK +GA L+E
Sbjct: 1   MEKSKVLVVGGTGYIGRRMVEASLAQGHPTFVLQRPEIGMDIEKLQMLLSFKAKGATLVE 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            SFADH+SLVEAVK+VDVVICT+SGVHFRSHN+LMQLKLV+AI+EAGN+K+   +E GM 
Sbjct: 61  GSFADHKSLVEAVKKVDVVICTMSGVHFRSHNLLMQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074410|ref|XP_002304366.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222841798|gb|EEE79345.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa]

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 109/121 (90%), Gaps = 1/121 (0%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M KSKVLVVGGTGYIGRRIVKASL QGH TYVLQR +IGLDI+KL +LLSFKKQGAHL++
Sbjct: 1   MAKSKVLVVGGTGYIGRRIVKASLDQGHTTYVLQRSEIGLDIEKLHLLLSFKKQGAHLVQ 60

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMI 119
            SF+D +SLVEAVK+VDVVICT+SGVHF+SHNILMQLKLVDAI+EAGNVK+   +E GM 
Sbjct: 61  GSFSDQQSLVEAVKKVDVVICTMSGVHFKSHNILMQLKLVDAIKEAGNVKRFLPSEFGMD 120

Query: 120 P 120
           P
Sbjct: 121 P 121

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.951	0.372	0.697	1.1e-39
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.951	0.372	0.697	2.3e-39
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.838	0.335	0.477	2.5e-19
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.838	0.327	0.458	1.7e-18
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.838	0.322	0.458	2e-17
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.830	0.334	0.427	8.6e-17
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.846	0.338	0.425	2.3e-16
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.798	0.323	0.394	1e-11
TAIR|locus:2201272	321	TKPR2 "tetraketide alpha-pyron	0.774	0.299	0.378	1.1e-05
DICTYBASE|DDB_G0286833	328	DDB_G0286833 "3-beta-hydroxyst	0.645	0.243	0.261	0.00038

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 83/119 (69%), Positives = 104/119 (87%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             K++VLVVG TGYIG+RIV+A LA+GHETYVLQRP+IGL+I+K+Q+ LSFKK GA ++E S
Sbjct:     9 KTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGS 68

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMIP 120
             F+DH+SLV AVK VDVV+  +SGVHFRSHNIL+QLKLV+AI+EAGNVK+   +E GM P
Sbjct:    69 FSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMDP 127

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 83/119 (69%), Positives = 104/119 (87%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             K++VLVVGGTG +GRRIV A LA+GHETYVLQRP+IG+DI+K+Q+LLSFK+ GAHL+E S
Sbjct:     9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGS 68

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMIP 120
             F+DH+SLV AVK+VDVV+  +SGVHFR+HNI +QLKLV AI+EAGNVK+   +E GM P
Sbjct:    69 FSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDP 127

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/109 (47%), Positives = 70/109 (64%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             KSK+LV+GGTGYIG+ +V+AS   GH T+ L R     D  K + + SFK  G  ++   
Sbjct:     5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
               DH SLV+A+K+VDVVI T+      S  IL Q K++ AI+EAGNVK+
Sbjct:    65 LNDHESLVKAIKQVDVVISTVG-----SMQILDQTKIISAIKEAGNVKR 108

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 50/109 (45%), Positives = 70/109 (64%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             KSK+LV+GGTG+IG+ I++AS+  GH T  L R     D +K + + +FK  G  L+   
Sbjct:     5 KSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLHGD 64

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
               DH SLV+A+K+ DVVI T+      S  IL Q K++ AI+EAGNVK+
Sbjct:    65 LNDHESLVKAIKQADVVISTVG-----SMQILDQTKIISAIKEAGNVKR 108

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 50/109 (45%), Positives = 67/109 (61%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             KSK+LV+GGTGY+G  IV+ S   G+ T+ L R     D  K + + SFK  G  ++   
Sbjct:     5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHGD 64

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
               DH SLV+A+K+VDVVI TI   H     I  Q K++ AI+EAGNVK+
Sbjct:    65 LNDHESLVKAIKQVDVVISTIG--H---KQIFDQTKIISAIKEAGNVKR 108

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 47/110 (42%), Positives = 65/110 (59%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             KSK+L +GGTGYIG+ IV+AS   GH T VL R        +   + +FK  G   +   
Sbjct:     4 KSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLLGD 63

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNIL-MQLKLVDAIREAGNVKK 111
               DH SLV ++K+ DVVI T+       H++L  Q K++ AI+EAGNVK+
Sbjct:    64 LDDHTSLVNSIKQADVVISTVG------HSLLGHQYKIISAIKEAGNVKR 107

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 46/108 (42%), Positives = 68/108 (62%)

Query:     4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
             SK+LV+G TG IG+ +V+ S   GH T+ L R     D  K Q++  FK  G  ++  S 
Sbjct:     3 SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62

Query:    64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +D  SLV+A+K+VDVVI  +    F++  IL Q  ++DAI+E+GNVK+
Sbjct:    63 SDKESLVKAIKQVDVVISAVG--RFQTE-ILNQTNIIDAIKESGNVKR 107

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 43/109 (39%), Positives = 62/109 (56%)

Query:     3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             KS+VL++G TG +G  + + S+  GH T+ L R +  L  DKL+   S    G  L++ S
Sbjct:     7 KSRVLIIGATGRLGNYLTRFSIESGHPTFALIR-NTTLS-DKLK---SLSDAGVTLLKGS 61

Query:    63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
               D  SL EAV +VDVVI  I   H     +L Q  LV  I++AG++K+
Sbjct:    62 LEDEGSLAEAVSKVDVVISAIPSKH-----VLDQKLLVRVIKQAGSIKR 105

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 39/103 (37%), Positives = 50/103 (48%)

Query:     4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEA 61
             S+ LV GGTG+I   I+K+ L  GH      R     D +K+  L  F+  KQ   +++A
Sbjct:     2 SEYLVTGGTGFIASYIIKSLLELGHTVRTTVRNP--RDEEKVGFLWEFQGAKQRLKILQA 59

Query:    62 SFADHRSLVEAVKRVDVVICTISGVHF-RSHNILMQLKLVDAI 103
                   S  EAV  VD V  T S V   + HNI  Q  LVD I
Sbjct:    60 DLTVEGSFDEAVNGVDGVFHTASPVLVPQDHNI--QETLVDPI 100

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

DICTYBASE|DDB_G0286833 DDB_G0286833 "3-beta-hydroxysteroid dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 95 (38.5 bits), Expect = 0.00038, P = 0.00038
 Identities = 23/88 (26%), Positives = 47/88 (53%)

Query:     6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
             V + GG+G++G+ I++  ++ G++ + L R +          +LS  + GA  + +S  D
Sbjct:     4 VFLTGGSGFLGKYIIEELISNGYKVFALSRSETS------NKVLS--QMGATPVMSSLHD 55

Query:    66 HRSLVEAVKRVDVVICTISGVHFRSHNI 93
              + L EA+K  D+VI   + +   S ++
Sbjct:    56 EQGLTEAIKGCDIVIHCAAKLETNSESV 83

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016126 "sterol biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0008202 "steroid metabolic process" evidence=IEA

GO:0006695 "cholesterol biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037049001 SubName- Full=Chromosome chr17 scaffold_85, whole genome shotgun sequence; (312 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	124
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-32
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-22
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-15
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-10
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-10
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-10
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	8e-10
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-08
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-08
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-08
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-07
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	4e-07
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	7e-07
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	7e-07
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	8e-07
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	8e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	8e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	9e-06
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-05
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-05
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-05
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	3e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	5e-05
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	7e-05
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	8e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-04
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	1e-04
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	1e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-04
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-04
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	5e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	5e-04
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	5e-04
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.001
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	0.001
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	0.001
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	0.002
cd05305	359	cd05305, L-AlaDH, Alanine dehydrogenase NAD-bindin	0.002
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	0.002
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	0.003
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	0.003
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	0.004
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	0.004
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	0.004
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	0.004

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  113 bits (284), Expect = 2e-32
 Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           +LV G TGY G  +V+ASL  GH    L R        K ++  S K  G  L+E    D
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDP------KSELAKSLKAAGVELVEGDLDD 54

Query: 66  HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107
           H SLVEA+K VDVV        + S  I    KL DA +EAG
Sbjct: 55  HESLVEALKGVDVVFSVTGF--WLSKEIEDGKKLADAAKEAG 94

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 88.1 bits (219), Expect = 2e-22
 Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           K+ + G TG +G  IV A LA  G    VL RP      +       F+  G  ++   +
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNE-------FQPSGVKVVPVDY 53

Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
           A H SLV A+K VD VI  + G          QLKL+DA   AG VK+
Sbjct: 54  ASHESLVAALKGVDAVISALGGAAIGD-----QLKLIDAAIAAG-VKR 95

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 68.6 bits (168), Expect = 1e-15
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           +L++G TG+IGR + +  L QGHE  +L R     +  +L       ++   ++E    D
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVR-----NTKRLSKED---QEPVAVVEGDLRD 52

Query: 66  HRSLVEAVKRVDVVICTI----SGVHFRSHNILMQLKLVDAIREAGNVKK 111
             SL +AV+ VDVVI           F   ++     +++A +EAG VK 
Sbjct: 53  LDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKH 101

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 57.1 bits (138), Expect = 1e-10
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
            VLVVG TGYIG+ +V+  + +G+    + R   G+     +     +  GA ++     
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT 121

Query: 65  DHRSLVEAVKR----VDVVIC 81
           D  SL + +      VDVV+ 
Sbjct: 122 DADSLRKVLFSEGDPVDVVVS 142

Length = 390

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 6e-10
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
          +LV G TG++G  +V+A LAQG+    L R           +L         ++E    D
Sbjct: 1  ILVTGATGFLGSNLVRALLAQGYRVRALVRSG-----SDAVLL---DGLPVEVVEGDLTD 52

Query: 66 HRSLVEAVKRVDVV 79
            SL  A+K  D V
Sbjct: 53 AASLAAAMKGCDRV 66

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 54.6 bits (131), Expect = 7e-10
 Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 21/118 (17%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           ++LV GG G+IG  +V+  LA GH+   L R   GLD             G   +     
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD---------PLLSGVEFVVLDLT 52

Query: 65  DHRSLVEAVKRV-DVVICT--ISGVH---------FRSHNILMQLKLVDAIREAGNVK 110
           D   + E  K V D VI     S V          F   N+   L L++A R AG  +
Sbjct: 53  DRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKR 110

Length = 314

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 53.8 bits (130), Expect = 8e-10
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 14/112 (12%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           KVLVVG TG +GR +V+  L +G++   L R     D  + + L      GA ++     
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVR-----DPSQAEKLE---AAGAEVVVGDLT 52

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSHNILM-----QLKLVDAIREAGNVKK 111
           D  SL  A++ +D VI                     + L+DA ++AG VK+
Sbjct: 53  DAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKR 103

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           +LV GGTG+IG  +V+  L +G+E  VL R              S         E    D
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRR---------RSESLNTGRIRFHEGDLTD 51

Query: 66  HRSLVEAVK--RVDVVI----------CTISGVHFRSHNILMQLKLVDAIREAG 107
             +L   +   + D VI                 F   N+L  L+L++A R AG
Sbjct: 52  PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG 105

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 14/102 (13%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           + V+G TG  GRR+VK  LA+GH+   L R                   G   ++    D
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-----------APGVTPVQKDLFD 49

Query: 66  HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107
              L EA+  VD V+           +  ++  L+DA   AG
Sbjct: 50  LADLAEALAGVDAVVDAFGA--RPDDSDGVK-HLLDAAARAG 88

Length = 182

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
          KVLV G TG++G  +V+  L QG E  VL RP    D   L+ L         ++E    
Sbjct: 2  KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP--TSDRRNLEGL------DVEIVEGDLR 53

Query: 65 DHRSLVEAVKRVDVVI 80
          D  SL +AV     + 
Sbjct: 54 DPASLRKAVAGCRALF 69

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 28/123 (22%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           +VLV GG G+IG  +V+  L +GHE  VL     G   +     L   K     IE    
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKEN-----LPEVKPNVKFIEGDIR 55

Query: 65  DHRSLVEAVKRVDVVICTISGVHF--------------RSH--NILMQLKLVDAIREAGN 108
           D   +  A + VD V       H               + H  N+L  L L++A R+AG 
Sbjct: 56  DDELVEFAFEGVDYVF------HQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG- 108

Query: 109 VKK 111
           VK+
Sbjct: 109 VKR 111

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          K+L++GGT +IG+ +V+  LA GH+  V  R
Sbjct: 2  KILIIGGTRFIGKALVEELLAAGHDVTVFNR 32

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
          KV V G TG+IG  +V+  +A GHE   L R D G    KL      +  GA +      
Sbjct: 2  KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAG--AAKL------EAAGAQVHRGDLE 53

Query: 65 DHRSLVEAVKRVDVVI 80
          D   L +A    D VI
Sbjct: 54 DLDILRKAAAEADAVI 69

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 11/104 (10%)

Query: 7   LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH 66
           LV G TG +G  +V+  LA+      L R     + +K +   +F   G  + +  + D 
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVR-----NPEKAK---AFAADGVEVRQGDYDDP 53

Query: 67  RSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
            +L  A + VD ++  IS        I      +DA ++AG VK
Sbjct: 54  ETLERAFEGVDRLL-LISPSDLEDR-IQQHKNFIDAAKQAG-VK 94

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.1 bits (109), Expect = 7e-07
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 4  SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           K+LV G TG++G  +V+  LA+GHE     R     + +           G  ++    
Sbjct: 1  MKILVTGATGFVGGAVVRELLARGHEVRAAVR-----NPEAAA----ALAGGVEVVLGDL 51

Query: 64 ADHRSLVEAVKRVDVVICT 82
           D +SLV   K VD V+  
Sbjct: 52 RDPKSLVAGAKGVDGVLLI 70

Length = 275

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 45.8 bits (109), Expect = 8e-07
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 13/114 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
            VLV G  G+IG  + +  L +GHE   L   DI    +   +L +      H I     
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRAL---DIYNSFNSWGLLDNAVHDRFHFISGDVR 57

Query: 65  DHRSLVEAVKRVDVV-----ICTISGVH-----FRSHNILMQLKLVDAIREAGN 108
           D   +   VK+ DVV     +  I   +     +   N+   L +++A      
Sbjct: 58  DASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYR 111

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 45.8 bits (109), Expect = 8e-07
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA- 64
          V V GGTG++GR +VK  L  G +  VL R +   +  +       +     ++E     
Sbjct: 1  VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 65 -----DHRSLVEAVKRVDVVI 80
                  +  E   +VD VI
Sbjct: 61 PNLGLSAAASRELAGKVDHVI 81

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 45.7 bits (109), Expect = 8e-07
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           V V G TG+IGR +V     +G +  V  R +       +   L         +E    
Sbjct: 2  VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDL----GQVLFVEFDLR 57

Query: 65 DHRSLVEAVKRVDVVI 80
          D  S+ +A++  DVVI
Sbjct: 58 DDESIRKALEGSDVVI 73

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 42.6 bits (101), Expect = 9e-06
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 22/114 (19%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+ ++G TG  G  IV+ +LA+GHE   L R     D  KL            +++    
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVR-----DPAKLPAEHE----KLKVVQGDVL 51

Query: 65  DHRSLVEAVKRVDVVICTISG--------VHFRSHNILMQLKLVDAIREAGNVK 110
           D   + EA++  D VI  +          +H           +V A++ AG  +
Sbjct: 52  DLEDVKEALEGQDAVISALGTRNDLSPTTLHSEGT-----RNIVSAMKAAGVKR 100

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           VLV G +G++   +V+  L +G++     R    +      + L  K     L  A   D
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 66  HRSLVEAVKRVDVVICTISGVHFRSH--------NILMQLKLVDAIREAGNVKK 111
            +S  E +K    V    + V F S          I   L  + A   A +VK+
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKR 114

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 38/128 (29%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQ--MLLSFKKQGAHLIEAS 62
           KVLV GG GYIG   V+  L  GHE  VL         D L     ++  K      E  
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVL---------DNLSNGHKIALLKLQFKFYEGD 52

Query: 63  FADHRSLVEAV---KRVDVVICTISGVHFR----------------SHNILMQLKLVDAI 103
             D R+L+ AV    ++D V+      HF                  +N++  L L++A+
Sbjct: 53  LLD-RALLTAVFEENKIDAVV------HFAASISVGESVQNPLKYYDNNVVGTLNLIEAM 105

Query: 104 REAGNVKK 111
            + G VKK
Sbjct: 106 LQTG-VKK 112

Length = 329

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 19/116 (16%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           +VL+VGG G+IG  +V A L +G +  V  R                   G   I+  + 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPP---------YELPLGGVDYIKGDYE 51

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSH----------NILMQLKLVDAIREAGNVK 110
           +   L  A+  +D VI   S  +  +           N+   ++L++A   AG  K
Sbjct: 52  NRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGK 107

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 16/120 (13%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETY-VLQRPDIGLDIDKLQMLLSFKKQGAHL--IEA 61
            VLV G TG+I   IV+  L  G++    ++         KL+ LL        L  +  
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLS---KSAKLKALLKAAGYNDRLEFVIV 57

Query: 62  S-FADHRSLVEAVKRVDVVICTISGVHFRSHN-----ILMQLKLV----DAIREAGNVKK 111
                  +  EA+K VD VI   S   F   +     I   ++      +A + AG+VK+
Sbjct: 58  DDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQ-----RPDIGLDIDKLQMLLSFKKQG---A 56
           K+LV GG GYIG   V+  L  GHE  +L        +     +++   ++F +      
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITP-VTFVEGDLRDR 59

Query: 57  HLIEASFADHRSLVEAV----KRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
            L++  F +H+  ++AV      + V       + +  +N++  L L++A+++AG VKK
Sbjct: 60  ELLDRLFEEHK--IDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VKK 115

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          K+++ GGTG+IGR + +   A GHE  VL R
Sbjct: 1  KIVITGGTGFIGRALTRRLTAAGHEVVVLSR 31

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE---AS 62
           LV G +  IG  I +A    G+   +  R    L        LS        +      
Sbjct: 3  ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLA------ALSASGGDVEAVPYDARD 56

Query: 63 FADHRSLVEAVK----RVDVVI 80
            D R+LV+A++    R+DV++
Sbjct: 57 PEDARALVDALRDRFGRIDVLV 78

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 40.0 bits (94), Expect = 8e-05
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 16/121 (13%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHL--IEASF 63
           VLV G TGY+G R+V   L +GH+   L R       +KL            +  +    
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVR-----SPEKLADRP----WSERVTVVRGDL 51

Query: 64  ADHRSLVEAVKRVDVVICTI----SGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119
            D  SL  A++ +D     +    SG  F   +         A R AG VK+     G+I
Sbjct: 52  EDPESLRAALEGIDTAYYLVHSMGSGGDFEEADRRAARNFARAARAAG-VKRIIYLGGLI 110

Query: 120 P 120
           P
Sbjct: 111 P 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          +L+ GGTG+IGR + +    +GHE  +L R
Sbjct: 1  ILITGGTGFIGRALTQRLTKRGHEVTILTR 30

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 25/88 (28%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQ----RPDIGLDIDKLQMLLSFKKQGAHLIE 60
          K+LV+G +G IGR +V   L++ HE  V+       D+ +DI                  
Sbjct: 2  KILVIGASGTIGRAVVAE-LSKRHE--VITAGRSSGDVQVDITD---------------P 43

Query: 61 ASFADHRSLVEAVKRVDVVICTISGVHF 88
          AS    R+L E V +VD V+     VHF
Sbjct: 44 ASI---RALFEKVGKVDAVVSAAGKVHF 68

Length = 199

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI 38
          +LV GG G+IG  +V+  L +GHE  V+ R D+
Sbjct: 1  ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDV 33

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 26/105 (24%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           +LV G TG IG ++    L  G     L R D            +   +GA ++     D
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAA--------ALAARGAEVVVGDLDD 52

Query: 66  HRSLVEAVKRVDVVICTIS---GVHFRSHNILMQLKLVDAIREAG 107
              L  A+  VD V            R   +        A+REAG
Sbjct: 53  PAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAG 97

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 26/115 (22%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           KVLV G  G+IGR +V   L++G E  +  R                      ++ A   
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAE--------------NAEPSVVLAELP 46

Query: 65  DHRSLVEAVKRVDVVICTISGVH------------FRSHNILMQLKLVDAIREAG 107
           D  S  +    VD V+   + VH            +R  N  +  +L  A    G
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG 101

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 17/115 (14%)

Query: 6   VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKKQGAHLIEASFA 64
            LVVGG+G++GR +V+  L +G        P + + DI     L                
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRG-------NPTVHVFDIRPTFELDPSSSGRVQFHTGDLT 54

Query: 65  DHRSLVEAV--KRVDVVICTISGVH------FRSHNILMQLKLVDAIREAGNVKK 111
           D + L +A   K  +VV  T S  H      +   N+     +++A R+ G VKK
Sbjct: 55  DPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCG-VKK 108

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 12/107 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           KVL++G  G I R      L   +    L   +          LL  K     ++E    
Sbjct: 2   KVLILGANGEIAREATTMLLENSNVELTLFLRNA-------HRLLHLKSARVTVVEGDAL 54

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
           +   L  A++  DVV   + G             +V A+ +A  VK+
Sbjct: 55  NSDDLKAAMRGQDVVYANLGGTDLDQ----QAENVVQAM-KAVGVKR 96

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          +L+ GGTG IGR +       GH+  +L R
Sbjct: 1  ILITGGTGLIGRALTARLRKGGHQVTILTR 30

Length = 297

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVL 33
          KVLV GG GYIG   V   L  G++  VL
Sbjct: 1  KVLVTGGAGYIGSHTVVELLEAGYDVVVL 29

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 20/85 (23%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVL--QRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
          ++V+G TG IG  + +   A GHE         D  +DI                 EAS 
Sbjct: 1  IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDYQVDITD---------------EASI 45

Query: 64 ADHRSLVEAVKRVDVVICTISGVHF 88
             ++L E V   D ++ T     F
Sbjct: 46 ---KALFEKVGHFDAIVSTAGDAEF 67

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 8  VVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHL--IEASFAD 65
          V G TGYIG  +VK  L +G+  +   R     D  K   LLS  K+G  L    A   +
Sbjct: 15 VTGATGYIGSWLVKLLLQRGYTVHATLR-----DPAKSLHLLSKWKEGDRLRLFRADLQE 69

Query: 66 HRSLVEAVKRVDVV 79
            S  EAVK  D V
Sbjct: 70 EGSFDEAVKGCDGV 83

Length = 353

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 6   VLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           +LV G TG  G  +V+A L   G +   L R D      K     +    G  +++    
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTR-DPSSPAAK-----ALAAPGVEVVQGDLD 54

Query: 65  DHRSLVEAVKRVDVVIC-TISGVHFRSHNILMQLKLVDAIREAG 107
           D  SL  A+K V  V   T          I     +VDA + AG
Sbjct: 55  DPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAG 98

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
          M +   L+ G +  IG  I +  LA  H   +  RP   L  D+L   L     GA    
Sbjct: 1  MERPTALITGASRGIGAAIARE-LAPTHTLLLGGRPAERL--DELAAELP----GATPFP 53

Query: 61 ASFADHRSL---VEAVKRVDVVI 80
              D  ++   VE + R+DV++
Sbjct: 54 VDLTDPEAIAAAVEQLGRLDVLV 76

Length = 227

>gnl|CDD|240630 cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains

 Score = 36.2 bits (85), Expect = 0.002
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           KV+++G  G +G    + +L  G E  VL      +++++L+ L          +   ++
Sbjct: 170 KVVILGA-GVVGENAARVALGLGAEVTVL-----DINLERLRYL---DDIFGGRVTTLYS 220

Query: 65  DHRSLVEAVKRVDVVICTI 83
           +  +L EA+K  D+VI  +
Sbjct: 221 NPANLEEALKEADLVIGAV 239

Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms. Length = 359

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
              V+G +G IGR + +    +G +  ++ R        KL  L      G  ++ A   
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSR-----SGSKLAWL-----PGVEIVAADAM 50

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSHNIL---MQLKLVDAIREAG 107
           D  S++ A +  DV+        +     L   +   +V A    G
Sbjct: 51  DASSVIAAARGADVIYHCA-NPAYTRWEELFPPLMENVVAAAEANG 95

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 24/118 (20%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL----SFKKQGAHL 58
              V V G TG  G+RIV+  LA+G       R     D+DK +  L    S +   A +
Sbjct: 17  TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR-----DVDKAKTSLPQDPSLQIVRADV 71

Query: 59  IEASFADHRSLVEAVKR-VDVVICTISGVHFRSHNILMQLK--------LVDAIREAG 107
            E S      LVEA+    D VIC  +G   RS +     K        LV+A R+AG
Sbjct: 72  TEGS----DKLVEAIGDDSDAVICA-TGFR-RSFDPFAPWKVDNFGTVNLVEACRKAG 123

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 10/90 (11%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL-QMLLSFKKQGAHLI 59
           GK   LV G +  IGR I +A   +G    V  R       + L   +       A  +
Sbjct: 4  SGK-VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 60 EA----SFADHRSLVEAVK----RVDVVIC 81
           A          +LV A +    R+D+++ 
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVN 92

Length = 251

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDI-DKLQMLLSFKKQGAHLIEASFA 64
          VLV GG+G+ G R+VK  L +G             DI    + L +++      ++    
Sbjct: 2  VLVTGGSGFFGERLVKQLLERGGTYVRS------FDIAPPGEALSAWQHPNIEFLKGDIT 55

Query: 65 DHRSLVEAVKRVDVVICTISGVH 87
          D   + +A+   D V  T + V 
Sbjct: 56 DRNDVEQALSGADCVFHTAAIVP 78

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
          +LV+G TG +GR+IV+ +L +G++   L R     ++ K   L   K+ GA L+    + 
Sbjct: 3  LLVIGATGTLGRQIVRQALDEGYQVRCLVR-----NLRKASFL---KEWGAELVYGDLSL 54

Query: 66 HRSLVEAVKRVDVVI 80
            +L  + K V  +I
Sbjct: 55 PETLPPSFKGVTAII 69

Length = 317

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 7   LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH 66
           LV GG G++GR IV+  L +  E   ++  D+    + L+       Q    IE    D 
Sbjct: 1   LVTGGGGFLGRHIVRL-LLREGELQEVRVFDLRFSPELLEDFSKL--QVITYIEGDVTDK 57

Query: 67  RSLVEAVKRVDVVICTISGVHFRSH---------NILMQLKLVDAIREAG 107
           + L  A++  DVVI T + +              N+     ++DA  +AG
Sbjct: 58  QDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG 107

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 25/117 (21%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           + LV G  G+IG  + +   A+GH          G D    +       Q     E    
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYV-------RGADWKSPE----HMTQPTDDDEFHLV 50

Query: 65  D---HRSLVEAVKRVDVVI---CTISGVHF--RSH------NILMQLKLVDAIREAG 107
           D     + ++A + VD V      + G+ +   +H      N L+   +++A R  G
Sbjct: 51  DLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARING 107

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.92
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.89
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.88
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.87
CHL00194	317	ycf39 Ycf39; Provisional	99.86
PLN02214	342	cinnamoyl-CoA reductase	99.85
PLN00198	338	anthocyanidin reductase; Provisional	99.84
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02650	351	dihydroflavonol-4-reductase	99.84
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.84
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.82
PLN02427	386	UDP-apiose/xylose synthase	99.82
PLN02572	442	UDP-sulfoquinovose synthase	99.81
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.81
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.81
PLN03209	576	translocon at the inner envelope of chloroplast su	99.81
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.8
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.8
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.79
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.79
PLN02686	367	cinnamoyl-CoA reductase	99.79
PLN02653	340	GDP-mannose 4,6-dehydratase	99.79
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.78
PRK06182	273	short chain dehydrogenase; Validated	99.77
PRK06180	277	short chain dehydrogenase; Provisional	99.77
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.77
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.77
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.77
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.76
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.75
PRK06482	276	short chain dehydrogenase; Provisional	99.75
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.75
PLN02260	668	probable rhamnose biosynthetic enzyme	99.75
PRK06194	287	hypothetical protein; Provisional	99.75
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.75
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.75
PRK05993	277	short chain dehydrogenase; Provisional	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.74
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.74
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.74
PRK07806	248	short chain dehydrogenase; Provisional	99.74
PRK08263	275	short chain dehydrogenase; Provisional	99.74
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.74
PLN02206	442	UDP-glucuronate decarboxylase	99.73
PRK09186	256	flagellin modification protein A; Provisional	99.73
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.73
PRK06179	270	short chain dehydrogenase; Provisional	99.73
PRK07201	657	short chain dehydrogenase; Provisional	99.73
PLN02996	491	fatty acyl-CoA reductase	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.72
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK05865	854	hypothetical protein; Provisional	99.72
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.72
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.72
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK06914	280	short chain dehydrogenase; Provisional	99.72
PRK12828	239	short chain dehydrogenase; Provisional	99.71
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.71
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.71
PRK06128	300	oxidoreductase; Provisional	99.71
PRK12827	249	short chain dehydrogenase; Provisional	99.71
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK07063	260	short chain dehydrogenase; Provisional	99.71
PRK05854	313	short chain dehydrogenase; Provisional	99.71
PRK05876	275	short chain dehydrogenase; Provisional	99.71
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.71
PRK07326	237	short chain dehydrogenase; Provisional	99.71
PRK07774	250	short chain dehydrogenase; Provisional	99.7
PRK08219	227	short chain dehydrogenase; Provisional	99.7
PRK07890	258	short chain dehydrogenase; Provisional	99.7
PRK12829	264	short chain dehydrogenase; Provisional	99.7
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.7
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.7
PRK07825	273	short chain dehydrogenase; Provisional	99.7
PRK07024	257	short chain dehydrogenase; Provisional	99.7
PRK10538	248	malonic semialdehyde reductase; Provisional	99.7
PRK05866	293	short chain dehydrogenase; Provisional	99.7
PRK08251	248	short chain dehydrogenase; Provisional	99.7
PRK06138	252	short chain dehydrogenase; Provisional	99.69
PRK07814	263	short chain dehydrogenase; Provisional	99.69
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.69
PRK05717	255	oxidoreductase; Validated	99.69
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK08267	260	short chain dehydrogenase; Provisional	99.69
PRK12320	699	hypothetical protein; Provisional	99.69
PLN02503	605	fatty acyl-CoA reductase 2	99.69
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.69
PLN02253	280	xanthoxin dehydrogenase	99.69
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.69
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.69
PLN00016	378	RNA-binding protein; Provisional	99.69
PRK06196	315	oxidoreductase; Provisional	99.69
PRK06398	258	aldose dehydrogenase; Validated	99.69
PRK08265	261	short chain dehydrogenase; Provisional	99.69
PRK09291	257	short chain dehydrogenase; Provisional	99.69
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.69
PRK05875	276	short chain dehydrogenase; Provisional	99.69
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.69
PRK12939	250	short chain dehydrogenase; Provisional	99.68
PRK06841	255	short chain dehydrogenase; Provisional	99.68
PRK07904	253	short chain dehydrogenase; Provisional	99.68
PRK07062	265	short chain dehydrogenase; Provisional	99.68
PRK07985	294	oxidoreductase; Provisional	99.68
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.68
PRK07478	254	short chain dehydrogenase; Provisional	99.68
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.68
PRK07856	252	short chain dehydrogenase; Provisional	99.68
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.68
PRK07074	257	short chain dehydrogenase; Provisional	99.68
PRK09242	257	tropinone reductase; Provisional	99.68
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK07067	257	sorbitol dehydrogenase; Provisional	99.67
PRK06114	254	short chain dehydrogenase; Provisional	99.67
PRK12746	254	short chain dehydrogenase; Provisional	99.67
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK08264	238	short chain dehydrogenase; Validated	99.67
PRK06701	290	short chain dehydrogenase; Provisional	99.67
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.67
PRK08643	256	acetoin reductase; Validated	99.67
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.67
PRK08339	263	short chain dehydrogenase; Provisional	99.67
PRK05693	274	short chain dehydrogenase; Provisional	99.66
PRK09135	249	pteridine reductase; Provisional	99.66
PRK07102	243	short chain dehydrogenase; Provisional	99.66
PRK06500	249	short chain dehydrogenase; Provisional	99.66
PRK07775	274	short chain dehydrogenase; Provisional	99.66
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.66
PRK07454	241	short chain dehydrogenase; Provisional	99.66
PRK07109	334	short chain dehydrogenase; Provisional	99.66
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.66
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.66
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.66
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.65
PRK08589	272	short chain dehydrogenase; Validated	99.65
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK08628	258	short chain dehydrogenase; Provisional	99.65
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.65
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.65
PRK05867	253	short chain dehydrogenase; Provisional	99.65
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.65
PRK06523	260	short chain dehydrogenase; Provisional	99.65
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.65
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.65
PRK12743	256	oxidoreductase; Provisional	99.64
PRK05650	270	short chain dehydrogenase; Provisional	99.64
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.64
PRK05872	296	short chain dehydrogenase; Provisional	99.64
PRK12937	245	short chain dehydrogenase; Provisional	99.64
PRK08226	263	short chain dehydrogenase; Provisional	99.64
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.64
PRK07577	234	short chain dehydrogenase; Provisional	99.64
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.64
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.64
PRK12747	252	short chain dehydrogenase; Provisional	99.64
PRK09072	263	short chain dehydrogenase; Provisional	99.64
PRK06172	253	short chain dehydrogenase; Provisional	99.64
PRK07023	243	short chain dehydrogenase; Provisional	99.64
PRK07060	245	short chain dehydrogenase; Provisional	99.63
PRK06139	330	short chain dehydrogenase; Provisional	99.63
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.63
KOG1208	314	consensus Dehydrogenases with different specificit	99.63
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK06057	255	short chain dehydrogenase; Provisional	99.63
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.63
PRK07576	264	short chain dehydrogenase; Provisional	99.63
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.63
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.63
PRK07035	252	short chain dehydrogenase; Provisional	99.62
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.62
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.62
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.62
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK05855	582	short chain dehydrogenase; Validated	99.62
PRK06181	263	short chain dehydrogenase; Provisional	99.62
PRK06101	240	short chain dehydrogenase; Provisional	99.62
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.62
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.62
PRK07069	251	short chain dehydrogenase; Validated	99.62
PRK12742	237	oxidoreductase; Provisional	99.61
PRK07677	252	short chain dehydrogenase; Provisional	99.61
PRK08278	273	short chain dehydrogenase; Provisional	99.61
PRK12367	245	short chain dehydrogenase; Provisional	99.61
PRK09134	258	short chain dehydrogenase; Provisional	99.61
PRK06924	251	short chain dehydrogenase; Provisional	99.61
PRK08017	256	oxidoreductase; Provisional	99.61
PRK06123	248	short chain dehydrogenase; Provisional	99.61
PRK06949	258	short chain dehydrogenase; Provisional	99.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.61
PRK12744	257	short chain dehydrogenase; Provisional	99.6
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.6
PRK07791	286	short chain dehydrogenase; Provisional	99.6
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.6
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.6
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.59
PLN02778	298	3,5-epimerase/4-reductase	99.59
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.59
PRK07201	657	short chain dehydrogenase; Provisional	99.59
PRK06483	236	dihydromonapterin reductase; Provisional	99.59
PRK06125	259	short chain dehydrogenase; Provisional	99.58
PRK07831	262	short chain dehydrogenase; Provisional	99.58
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.58
PRK07041	230	short chain dehydrogenase; Provisional	99.58
PRK06198	260	short chain dehydrogenase; Provisional	99.58
PRK06484	520	short chain dehydrogenase; Validated	99.58
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.58
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.57
PRK08177	225	short chain dehydrogenase; Provisional	99.57
PLN02780	320	ketoreductase/ oxidoreductase	99.57
PRK06953	222	short chain dehydrogenase; Provisional	99.57
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.57
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK07832	272	short chain dehydrogenase; Provisional	99.56
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.56
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.56
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.56
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.56
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK05884	223	short chain dehydrogenase; Provisional	99.55
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.55
PRK06940	275	short chain dehydrogenase; Provisional	99.55
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
COG2910	211	Putative NADH-flavin reductase [General function p	99.55
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.54
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.54
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.54
PRK06484	520	short chain dehydrogenase; Validated	99.53
PRK08324	681	short chain dehydrogenase; Validated	99.53
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.53
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.53
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK08303	305	short chain dehydrogenase; Provisional	99.53
PRK08862	227	short chain dehydrogenase; Provisional	99.53
PRK08703	239	short chain dehydrogenase; Provisional	99.53
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.52
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.5
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.5
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK05599	246	hypothetical protein; Provisional	99.5
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.49
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.49
PLN00015	308	protochlorophyllide reductase	99.49
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.49
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK07578	199	short chain dehydrogenase; Provisional	99.45
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.45
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.45
PLN02260	668	probable rhamnose biosynthetic enzyme	99.44
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.44
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.43
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.42
KOG0725	270	consensus Reductases with broad range of substrate	99.42
COG1028	251	FabG Dehydrogenases with different specificities (	99.4
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.38
PRK08309	177	short chain dehydrogenase; Provisional	99.37
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.37
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.37
PRK06720	169	hypothetical protein; Provisional	99.37
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.36
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.33
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.33
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.32
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.32
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.29
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.29
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.27
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	99.25
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.25
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.22
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.19
KOG2733	423	consensus Uncharacterized membrane protein [Functi	99.16
PTZ00325	321	malate dehydrogenase; Provisional	99.14
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.08
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.01
PLN00106	323	malate dehydrogenase	98.96
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.96
PRK09620	229	hypothetical protein; Provisional	98.95
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.94
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.93
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.91
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.86
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.85
PRK05086	312	malate dehydrogenase; Provisional	98.84
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.82
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.81
COG3268	382	Uncharacterized conserved protein [Function unknow	98.81
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.8
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.78
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	98.7
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.68
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.6
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.6
PRK09496	453	trkA potassium transporter peripheral membrane com	98.54
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.54
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.53
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.53
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.51
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	98.47
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	98.44
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.44
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.43
PRK14982	340	acyl-ACP reductase; Provisional	98.41
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.4
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.4
PRK10669	558	putative cation:proton antiport protein; Provision	98.39
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	98.39
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.37
PRK09496	453	trkA potassium transporter peripheral membrane com	98.37
PRK03659	601	glutathione-regulated potassium-efflux system prot	98.36
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	98.31
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.29
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.29
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.28
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	98.28
PRK04148	134	hypothetical protein; Provisional	98.25
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.24
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	98.23
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.22
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	98.21
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	98.21
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	98.19
PRK03562	621	glutathione-regulated potassium-efflux system prot	98.19
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.18
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.16
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.16
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.15
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	98.14
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.14
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.11
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	98.1
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.09
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	98.08
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	98.08
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	98.07
PRK08223	287	hypothetical protein; Validated	98.07
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.03
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.02
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.01
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.01
PRK08328	231	hypothetical protein; Provisional	98.0
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.0
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	98.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.99
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.99
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.99
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.98
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.97
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.95
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.95
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.94
PRK10537	393	voltage-gated potassium channel; Provisional	97.93
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.93
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.91
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.91
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.9
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.9
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.89
PLN02383	344	aspartate semialdehyde dehydrogenase	97.89
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	97.87
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.86
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.86
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.85
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.85
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.85
PRK05442	326	malate dehydrogenase; Provisional	97.84
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.84
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.84
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.84
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.82
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.82
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.82
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.82
PRK08655	437	prephenate dehydrogenase; Provisional	97.81
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.81
PRK06223	307	malate dehydrogenase; Reviewed	97.81
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.81
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.8
PTZ00117	319	malate dehydrogenase; Provisional	97.8
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.79
KOG2774	366	consensus NAD dependent epimerase [General functio	97.79
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.79
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	97.79
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.78
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.78
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.77
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.76
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.76
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.76
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.76
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.76
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.75
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.75
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.75
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.75
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	97.74
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.73
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.73
PLN02602	350	lactate dehydrogenase	97.72
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.71
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.71
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.71
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.7
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	97.7
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	97.7
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	97.68
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.68
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.67
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.67
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.66
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.65
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	97.63
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.62
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.61
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.61
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.61
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.6
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.6
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.6
PRK07877	722	hypothetical protein; Provisional	97.59
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.58
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.58
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.56
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.56
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.55
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.55
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.54
PLN02928	347	oxidoreductase family protein	97.54
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.54
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.53
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	97.53
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.53
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.53
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.52
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	97.52
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	97.52
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.52
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.52
PRK07411	390	hypothetical protein; Validated	97.52
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.51
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.51
PLN00203	519	glutamyl-tRNA reductase	97.5
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.5
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	97.49
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	97.49
PRK14851	679	hypothetical protein; Provisional	97.49
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.49
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	97.49
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.49
PRK07417	279	arogenate dehydrogenase; Reviewed	97.48
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.48
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.48
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.48
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.48
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.46
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	97.46
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	97.45
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	97.45
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.42
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	97.41
PRK14852	989	hypothetical protein; Provisional	97.41
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.4
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.4
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.4
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.39
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.38
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	97.38
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.38
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.38
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.38
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.37
PLN02948	577	phosphoribosylaminoimidazole carboxylase	97.37
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	97.37
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.37
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.36
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.35
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.35
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.35
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	97.34
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.33

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.92  E-value=4e-24  Score=146.70  Aligned_cols=116  Identities=26%  Similarity=0.305  Sum_probs=99.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++||||+||||+++++.|+++||.|+++.|+++.  +...+++..++  ..+...+.+|+.|+++++++++++|.|+
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            5789999999999999999999999999999999854  22333444444  3458999999999999999999999999


Q ss_pred             EeCccccc---------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           81 CTISGVHF---------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        81 ~~a~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |.|.|..+         .++.+.|++|++++|.+.++++|+|++||+..
T Consensus        84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aA  132 (327)
T KOG1502|consen   84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAA  132 (327)
T ss_pred             EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHH
Confidence            99998654         34568999999999999988999999998753

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=6e-23  Score=138.66  Aligned_cols=110  Identities=30%  Similarity=0.465  Sum_probs=94.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++||||+|+||++.+.+|++.|++|+++++-..+.    .+....   ...+++++|+.|.+.++++|+.  +|+|+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~----~~~v~~---~~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH----KIALLK---LQFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC----HHHhhh---ccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            6899999999999999999999999999999876332    122211   1168999999999999999984  999999


Q ss_pred             eCc----------cccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TIS----------GVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+          |..|++.|+.|+.+++++|.+.+ ++++||+||+.+|
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavY  122 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVY  122 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhc
Confidence            998          34678999999999999999999 9999999999887

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.88  E-value=2.2e-22  Score=137.73  Aligned_cols=109  Identities=34%  Similarity=0.485  Sum_probs=90.1

Q ss_pred             EEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCC-eEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            7 LVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQG-AHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         7 li~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      +||||+|++|++++++|+++|  ++|+++++.+....      .......+ .+++.+|++|++++.++++++|+|||+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~------~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A   74 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF------LKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTA   74 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc------chhhhcccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence            699999999999999999999  79999988763211      11112223 3499999999999999999999999999


Q ss_pred             cccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           84 SGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        84 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      ++..         ++++|+.|+++++++|.+.+ ++|+||+||...++
T Consensus        75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~  121 (280)
T PF01073_consen   75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVF  121 (280)
T ss_pred             ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeE
Confidence            8653         24678999999999999998 99999999987664

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.87  E-value=2e-21  Score=136.54  Aligned_cols=119  Identities=19%  Similarity=0.180  Sum_probs=94.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh---hccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS---FKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+|+++||||+|++|++++++|+++|++|++++|...............   ....++.++.+|+.|.+.+.++++++|+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~   93 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY   93 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence            4689999999999999999999999999999998753221111111111   1123578999999999999999999999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...          +.+.|+.++.+++++|.+.+ ++++|++||...|
T Consensus        94 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vy  145 (348)
T PRK15181         94 VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTY  145 (348)
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhh
Confidence            999997432          34578999999999999998 8999999987665

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.86  E-value=6.4e-21  Score=132.49  Aligned_cols=106  Identities=25%  Similarity=0.323  Sum_probs=90.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|++|++++++|+++|++|++++|+++     .   .......+++++.+|+.|++++.++++++|+|||++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~-----~---~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~   72 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR-----K---ASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS   72 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH-----H---hhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence            58999999999999999999999999999999862     1   111123478999999999999999999999999987


Q ss_pred             ccc-----cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           84 SGV-----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        84 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +..     .+.+.|..++.++++++.+.+ ++|+|++|+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~  111 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL  111 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccc
Confidence            632     234568899999999999999 8999999974

>PLN02214 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.7e-20  Score=130.59  Aligned_cols=115  Identities=26%  Similarity=0.224  Sum_probs=92.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|+.+............ ...+++++.+|++|++++.++++++|+|||+
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            578999999999999999999999999999999863211111111111 1235889999999999999999999999999


Q ss_pred             Ccccc-----ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           83 ISGVH-----FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        83 a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      |++..     .++.|+.++.++++++.+.+ ++++|++||..
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~  129 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIG  129 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccce
Confidence            98642     34678999999999999988 88999999853

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.84  E-value=3.8e-20  Score=129.43  Aligned_cols=120  Identities=21%  Similarity=0.284  Sum_probs=93.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++++++||||+|+||++++++|+++|++|+++.|+++...  .......+. ..+++++.+|++|++++.++++++|+|
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   84 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQK--KIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV   84 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHH--HHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence            45688999999999999999999999999998888863221  111111111 135889999999999999999999999


Q ss_pred             EEeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           80 ICTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        80 i~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      ||+|+...         +++.|+.++.++++++.+.+.++++|++||...|.
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g  136 (338)
T PLN00198         85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS  136 (338)
T ss_pred             EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence            99998532         12468899999999998863378999999877653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=3.6e-20  Score=128.50  Aligned_cols=114  Identities=24%  Similarity=0.287  Sum_probs=92.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++....  .........  ..+++++.+|+.|++.+.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPK--KTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchh--hHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            578999999999999999999999999999998863321  111111111  2468899999999999999999999999


Q ss_pred             EeCcccc---------ceecchHHHHHHHHHHHHh-CCccEEEEecCCc
Q 033236           81 CTISGVH---------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMI  119 (124)
Q Consensus        81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~  119 (124)
                      |+|++..         .++.|+.++.++++++.+. + ++++|++||..
T Consensus        82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~  129 (322)
T PLN02662         82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMA  129 (322)
T ss_pred             EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHH
Confidence            9998532         2356899999999999887 6 78999999864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=5.3e-20  Score=127.92  Aligned_cols=115  Identities=25%  Similarity=0.321  Sum_probs=92.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++||||+|+||+++++.|+++|++|+++.|+.+..+  ........  ...+++++.+|+++++.+.++++++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK--KTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH--HHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            578999999999999999999999999999998874321  11111111  12468899999999999999999999999


Q ss_pred             EeCcccc---------ceecchHHHHHHHHHHHHh-CCccEEEEecCCcc
Q 033236           81 CTISGVH---------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMIP  120 (124)
Q Consensus        81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~  120 (124)
                      |+|++..         ..+.|+.++.++++++.+. + ++|+|++||...
T Consensus        83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~  131 (322)
T PLN02986         83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAA  131 (322)
T ss_pred             EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhh
Confidence            9998642         2356789999999999885 5 789999998754

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=7.3e-20  Score=128.63  Aligned_cols=118  Identities=19%  Similarity=0.227  Sum_probs=92.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +.++++||||+|+||+++++.|+++|++|++++|+++.....  .......  ..+++++.+|+.|++.+.++++++|+|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V   81 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV--KHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV   81 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH--HHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence            357899999999999999999999999999999876322111  1111111  135789999999999999999999999


Q ss_pred             EEeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...         .++.|+.++.++++++.+.+.++++|++||...|
T Consensus        82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~  132 (351)
T PLN02650         82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV  132 (351)
T ss_pred             EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhc
Confidence            99997532         2356789999999999987646899999987543

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.84  E-value=1e-19  Score=124.05  Aligned_cols=118  Identities=21%  Similarity=0.326  Sum_probs=99.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      .++++||||+|+||+|.+.+|+++|+.|++++.-...... ..+....+.  .+.+.++++|++|.+.++++|+.  .|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~-sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLE-SLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchh-HHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence            5789999999999999999999999999999866543322 222233332  47899999999999999999984  899


Q ss_pred             EEEeCc----------cccceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           79 VICTIS----------GVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        79 vi~~a~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      |+|.|+          |..++..|+.|+.++++.+.+.+ ++.++++||+.+|-
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG  133 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYG  133 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeec
Confidence            999987          34578899999999999999999 99999999998874

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.83  E-value=1.7e-19  Score=125.83  Aligned_cols=115  Identities=20%  Similarity=0.290  Sum_probs=92.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|+++||||+|+||+++++.|+++|  ++|++++|++..    ...........+++++.+|++|++++.++++++|+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK----QWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH----HHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            367899999999999999999999986  789999887521    11111111234688999999999999999999999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |||+||...          .++.|+.++.++++++.+.+ ++++|++||..+
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~  128 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA  128 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC
Confidence            999998532          23578899999999999988 789999997654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=1.9e-19  Score=126.22  Aligned_cols=117  Identities=18%  Similarity=0.223  Sum_probs=90.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh-h---hccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL-S---FKKQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      |+++||||+|+||+++++.|+++|++|++++|+++........... .   ....+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999986422111111111 0   0124688999999999999999985  69


Q ss_pred             EEEEeCccccc----------eecchHHHHHHHHHHHHhCCc---cEEEEecCCccc
Q 033236           78 VVICTISGVHF----------RSHNILMQLKLVDAIREAGNV---KKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~i~~ss~~~~  121 (124)
                      +|||+|+....          .+.|+.++.+++++|.+.+ +   .+++++||...|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vy  136 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELY  136 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhh
Confidence            99999985321          2457789999999999877 4   389999987665

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=2.7e-19  Score=124.50  Aligned_cols=117  Identities=24%  Similarity=0.282  Sum_probs=91.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++......  .......  ..+++++.+|++|++++.++++++|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT--DHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH--HHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            57899999999999999999999999999988886432111  1111111  2468899999999999999999999999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+||...          .++.|+.++.++++++.+....+++|++||...|
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~  133 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV  133 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence            9998532          1356889999999999885326799999987554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.82  E-value=2.5e-19  Score=127.68  Aligned_cols=119  Identities=25%  Similarity=0.288  Sum_probs=93.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d   77 (124)
                      ++++++||||+|++|+++++.|+++|++|++++|+++................+++++.+|++|++++.++++    ++|
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D  138 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD  138 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence            3578999999999999999999999999999999874321110000001123478999999999999999998    589


Q ss_pred             EEEEeCccc-----cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGV-----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +||||++..     ...+.|..++.++++++.+.+ ++++|++||...+
T Consensus       139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~  186 (390)
T PLN02657        139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ  186 (390)
T ss_pred             EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc
Confidence            999998742     234567889999999999998 8999999976543

>PLN02427 UDP-apiose/xylose synthase

Probab=99.82  E-value=1.9e-19  Score=127.99  Aligned_cols=112  Identities=15%  Similarity=0.167  Sum_probs=89.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .|+++||||+|+||+++++.|+++ |++|++++|++..     .......    ...+++++.+|+.|.+.+.++++++|
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~-----~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK-----IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh-----hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            578999999999999999999998 5999999987521     1111111    12468999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          ....|+.++.+++++|.+.+  +++|++||...|
T Consensus        89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vY  140 (386)
T PLN02427         89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVY  140 (386)
T ss_pred             EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeee
Confidence            9999997421          12367889999999998776  689999987655

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.81  E-value=4.1e-19  Score=128.37  Aligned_cols=119  Identities=23%  Similarity=0.244  Sum_probs=90.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-c--------------hHHHHHhhhhccCCeEEEEcccCCh
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-D--------------IDKLQMLLSFKKQGAHLIEASFADH   66 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~D~~~~   66 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|..... +              ....+........+++++.+|++|+
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~  125 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF  125 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH
Confidence            467899999999999999999999999999987532110 0              0001111111234688999999999


Q ss_pred             HHHHHHhcc--cCEEEEeCcccc-------------ceecchHHHHHHHHHHHHhCCcc-EEEEecCCccc
Q 033236           67 RSLVEAVKR--VDVVICTISGVH-------------FRSHNILMQLKLVDAIREAGNVK-KRKLNEGMIPF  121 (124)
Q Consensus        67 ~~~~~~~~~--~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss~~~~  121 (124)
                      +.+.+++++  +|+|||+|+...             ..+.|+.++.++++++.+.+ ++ ++|++||...|
T Consensus       126 ~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vY  195 (442)
T PLN02572        126 EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEY  195 (442)
T ss_pred             HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceec
Confidence            999999984  899999996421             13568999999999999988 65 89999988766

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.81  E-value=7.9e-19  Score=113.08  Aligned_cols=102  Identities=27%  Similarity=0.407  Sum_probs=89.4

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG   85 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   85 (124)
                      |+|+||+|++|+.++++|+++|++|+++.|+++        +.+.  ..+++++.+|+.|++++.++++++|+||+++|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~--------~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPS--------KAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGG--------GHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCch--------hccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            689999999999999999999999999999982        2222  688999999999999999999999999999986


Q ss_pred             ccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           86 VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ...   +.....++++++.+++ ++|++++|+...|
T Consensus        71 ~~~---~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~  102 (183)
T PF13460_consen   71 PPK---DVDAAKNIIEAAKKAG-VKRVVYLSSAGVY  102 (183)
T ss_dssp             TTT---HHHHHHHHHHHHHHTT-SSEEEEEEETTGT
T ss_pred             hcc---cccccccccccccccc-cccceeeeccccC
Confidence            443   3788899999999998 8999999976644

...

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.81  E-value=4.3e-19  Score=125.76  Aligned_cols=110  Identities=16%  Similarity=0.218  Sum_probs=89.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|+||+++++.|.++|++|++++|.....       ... .....+++.+|+.+.+.+.++++++|+|||+
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-------~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-------MSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-------ccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            57899999999999999999999999999999865211       000 1123578899999999999999999999999


Q ss_pred             Ccccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...           ....|+.++.++++++.+.+ ++++|++||...|
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vY  141 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIY  141 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhc
Confidence            97431           12357889999999999998 8999999987655

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.81  E-value=7.7e-19  Score=128.75  Aligned_cols=117  Identities=22%  Similarity=0.250  Sum_probs=92.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--------ccCCeEEEEcccCChHHHHHHh
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--------KKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      ++++++|+||+|+||++++++|++.|++|++++|+....... ...+...        ...+++++.+|+.|.+++.+++
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l-~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL-VQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            567899999999999999999999999999999987221111 0111000        0135889999999999999999


Q ss_pred             cccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           74 KRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        74 ~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      .++|+|||++|...        .+..|..++.++++++.+.+ ++|||++||...
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga  211 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGT  211 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchh
Confidence            99999999998542        13457889999999999998 899999998653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.81  E-value=1.3e-18  Score=122.40  Aligned_cols=116  Identities=24%  Similarity=0.333  Sum_probs=90.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|+||++++++|+++|++|++++|+++.    .......+ ...+++++.+|+++++.+.++++++|+|||
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   85 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAK----SLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH   85 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            6899999999999999999999999999999887621    11111121 134688999999999999999999999999


Q ss_pred             eCccccce------------ecc-----hHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           82 TISGVHFR------------SHN-----ILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        82 ~a~~~~~~------------~~~-----~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      +|+.....            +.|     +.++.++++++.+.+.++++|++||...|.
T Consensus        86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg  143 (353)
T PLN02896         86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT  143 (353)
T ss_pred             CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence            99853211            122     478999999998874368999999876663

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=9.5e-19  Score=122.80  Aligned_cols=119  Identities=21%  Similarity=0.329  Sum_probs=92.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc--c
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK--R   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--~   75 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|........ .......   ...+++++.+|++|++.+.++++  +
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEA-LRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHH-HHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            4467999999999999999999999999999998764322111 1111111   12468899999999999999987  5


Q ss_pred             cCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+|||+++...          .++.|+.++.++++++.+.+ +++++++||...|
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vy  136 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVY  136 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHh
Confidence            899999997532          24567899999999999888 7899999986544

>PLN02583 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.8e-18  Score=119.32  Aligned_cols=116  Identities=14%  Similarity=0.251  Sum_probs=91.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++||||+|+||+++++.|+++|++|+++.|+++..  ........+  ...+++++.+|++|++++.+++.++|.|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET--EIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh--hHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            57899999999999999999999999999999864211  111111222  13468899999999999999999999999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |.+++..        .++.|+.++.++++++.+...++++|++||...
T Consensus        84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a  131 (297)
T PLN02583         84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTA  131 (297)
T ss_pred             EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHh
Confidence            9875432        246789999999999988632789999998654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.80  E-value=6.7e-19  Score=122.16  Aligned_cols=109  Identities=28%  Similarity=0.394  Sum_probs=91.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++|||++|++|+++++.|+++|++|++++|++...        ......+++++.+|+.|++++.++++++|+|||++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc--------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            4799999999999999999999999999999986221        11223468899999999999999999999999999


Q ss_pred             cccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +...        .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~  117 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATL  117 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhc
Confidence            7432        24568899999999999988 8999999987655

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.79  E-value=1.4e-18  Score=122.08  Aligned_cols=118  Identities=21%  Similarity=0.193  Sum_probs=91.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      +++|+++||||+|+||+++++.|+++|++|++++|++.... .......  ...++.++.+|++|++++.+++++  +|+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP-NLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFKPEI   78 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch-hHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence            46789999999999999999999999999999998864321 1111111  123577899999999999999985  699


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...          .++.|+.++.++++++.+.+.++++|++||...|
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vy  131 (349)
T TIGR02622        79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCY  131 (349)
T ss_pred             EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhh
Confidence            999998431          2456889999999999876535799999986544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.79  E-value=1.6e-18  Score=121.68  Aligned_cols=109  Identities=21%  Similarity=0.308  Sum_probs=87.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC-ChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA-DHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~   81 (124)
                      |+++||||+|++|+++++.|++. |++|++++|+.    . .....  .....++++.+|+. +.+.+.++++++|+|||
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~----~-~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT----D-RLGDL--VNHPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH----H-HHHHh--ccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            68999999999999999999986 69999999865    1 11111  12346899999997 77888899999999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +++...          .++.|+.++.+++++|.+.+  +++|++||...|
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vy  122 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVY  122 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceee
Confidence            987421          23457899999999999876  699999987665

>PLN02686 cinnamoyl-CoA reductase

Probab=99.79  E-value=2.7e-18  Score=121.55  Aligned_cols=115  Identities=21%  Similarity=0.256  Sum_probs=90.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-----cCCeEEEEcccCChHHHHHHhcc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-----KQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|+++.|+.+..  .....+....     ..++.++.+|++|++++.+++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            4578999999999999999999999999999988875211  1111111100     13578999999999999999999


Q ss_pred             cCEEEEeCcccc----------ceecchHHHHHHHHHHHHh-CCccEEEEecCC
Q 033236           76 VDVVICTISGVH----------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGM  118 (124)
Q Consensus        76 ~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~  118 (124)
                      +|+|+|+++...          ..+.|+.++.++++++.+. + ++++|++||.
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~  181 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSL  181 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccH
Confidence            999999987431          1346789999999999886 6 8999999985

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=1.6e-18  Score=121.38  Aligned_cols=119  Identities=20%  Similarity=0.192  Sum_probs=91.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh---hhccCCeEEEEcccCChHHHHHHhcc--c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL---SFKKQGAHLIEASFADHRSLVEAVKR--V   76 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~--~   76 (124)
                      ++|+++||||+|++|+++++.|+++|++|++++|+++.......+...   .....+++++.+|++|.+++.+++++  +
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            468899999999999999999999999999999876322111111111   01124588999999999999999885  6


Q ss_pred             CEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCcc-----EEEEecCCccc
Q 033236           77 DVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVK-----KRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~ss~~~~  121 (124)
                      |+|||+|+...          ..+.|+.++.++++++.+.+ ++     ++|++||...|
T Consensus        85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vy  143 (340)
T PLN02653         85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMY  143 (340)
T ss_pred             CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHh
Confidence            99999998532          12568899999999999887 54     89999876554

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=4.2e-18  Score=118.97  Aligned_cols=116  Identities=24%  Similarity=0.380  Sum_probs=90.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|++|+++++.|+++|++|++++|...+.. ............++.++.+|++|++.+.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH-hHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            57999999999999999999999999999876542221 11111222223457889999999999999987  5899999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          ..+.|+.++.++++++.+.+ ++++|++||...|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~y  128 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVY  128 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhh
Confidence            997432          23467889999999999988 8899999987554

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.78  E-value=4.4e-18  Score=114.70  Aligned_cols=117  Identities=19%  Similarity=0.219  Sum_probs=87.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc---cCCeEEEEcccCChHHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK---KQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      |++++++||||+++||..+++.|+++|++++++.|+.+..    .+....+.   ...++++.+|+++++++.++.+   
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL----~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL----EALAKELEDKTGVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHH----HHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence            4567899999999999999999999999999999998222    22222222   2357899999999999999875   


Q ss_pred             ----ccCEEEEeCccccc--------------eecchHHHHHHHH----HHHHhCCccEEEEecCCcccc
Q 033236           75 ----RVDVVICTISGVHF--------------RSHNILMQLKLVD----AIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ----~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~~~~  122 (124)
                          .+|++|||||...+              ++.|+.+...+.+    .+.+.+ -.+||.++|...+.
T Consensus        80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~  148 (265)
T COG0300          80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLI  148 (265)
T ss_pred             hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcC
Confidence                49999999996533              3456666554444    445555 57899999877553

>PRK06182 short chain dehydrogenase; Validated

Probab=99.77  E-value=7.8e-18  Score=114.64  Aligned_cols=110  Identities=24%  Similarity=0.286  Sum_probs=84.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++|||++|++|+++++.|+++|++|++++|++     ...+   .....++.++.+|++|++++.++++      
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-----~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV-----DKME---DLASLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHH---HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            6788999999999999999999999999999999986     2222   2223458899999999999988886      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHH----HHHHHHHHHhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQ----LKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                       ++|++||++|....              ++.|..+.    ..+++.+.+.+ ..+++++||..
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~  135 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMG  135 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchh
Confidence             58999999985421              24566664    44445555565 57899999754

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=113.86  Aligned_cols=113  Identities=17%  Similarity=0.130  Sum_probs=87.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++     ...+........++..+.+|++|++++.++++       
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE-----AARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH-----HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999986     22222222223468889999999999988876       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|+||||+|....              ++.|+.++.++++++.+    .+ ..++|++||...
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~  140 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGG  140 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccc
Confidence            37999999986421              45788889998888654    33 468999997653

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.77  E-value=6.1e-18  Score=127.43  Aligned_cols=110  Identities=18%  Similarity=0.277  Sum_probs=88.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH-HHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS-LVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi   80 (124)
                      +|+++||||+|++|++++++|+++ |++|++++|.+..    ....   ....+++++.+|++|.+. +.++++++|+||
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~----~~~~---~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA----ISRF---LGHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh----hhhh---cCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            578999999999999999999986 7999999997621    1111   123468899999998765 677889999999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+...          .++.|+.++.+++++|.+.+  +++|++||...|
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vy  436 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVY  436 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhc
Confidence            9997432          23568999999999999987  689999987655

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.77  E-value=7.2e-18  Score=112.09  Aligned_cols=108  Identities=29%  Similarity=0.436  Sum_probs=89.7

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc--CEEEEeC
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV--DVVICTI   83 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~a   83 (124)
                      |+|+||+|++|++++++|+++|+.|+.+.|++.+....    .   ...+++++.+|+.|++.+.++++..  |+|||++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----~---~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----E---KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----H---HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccc----c---ccceEEEEEeeccccccccccccccCceEEEEee
Confidence            68999999999999999999999999888887322111    1   1128899999999999999999865  9999999


Q ss_pred             ccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +..          ...+.|+.++.++++++.+.+ +++++++||...|
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y  120 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVY  120 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGG
T ss_pred             cccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence            864          224568999999999999999 7899999987655

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.77  E-value=8.9e-18  Score=114.05  Aligned_cols=121  Identities=15%  Similarity=0.136  Sum_probs=92.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |.+|.++||||+++||.+++.+|++.|.+++.+.|..+..+.-..+..+.....++..+++|++|.+++.++++      
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            35788999999999999999999999999988888764443332222222222358999999999999998874      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~~  122 (124)
                       ++|++|||||...              .+++|+.|+..+.+++.+    .+ -.||+.+||...+.
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM  155 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence             4899999999552              357888888777777654    44 46999999887654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.76  E-value=6.5e-18  Score=118.06  Aligned_cols=117  Identities=25%  Similarity=0.369  Sum_probs=93.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++.+++||||+|++|+++++.|++.+  .++++++..+......  .....+.+..++++++|+.+..++.+++.++ .|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~--~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLP--AELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccc--hhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            35679999999999999999999988  8999999887311101  1111113567899999999999999999999 77


Q ss_pred             EEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           80 ICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        80 i~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      +||++..          ...+.|+.|+.+++++|.+.| ++++||+||..+.|
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf  131 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVF  131 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEe
Confidence            7776522          235789999999999999999 99999999987665

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=2.7e-17  Score=110.98  Aligned_cols=111  Identities=28%  Similarity=0.360  Sum_probs=88.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHh-cccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAV-KRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~d~vi   80 (124)
                      +|+++||||+|++|+++++.|++.|++|+++.|+++    .......  ...+++++.+|+++ .+.+.+.+ .++|+||
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~~~~--~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD----KAKTSLP--QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH----HHHHhcc--cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            578999999999999999999999999999999872    1111111  13468899999998 46777777 6899999


Q ss_pred             EeCcccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           81 CTISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        81 ~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +++|...      ....|..++.++++++.+.+ ++++|++||...
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v  135 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILV  135 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccc
Confidence            9987532      13567789999999999888 799999997653

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=7.8e-18  Score=116.12  Aligned_cols=108  Identities=32%  Similarity=0.477  Sum_probs=89.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc-CEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV-DVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-d~vi~~   82 (124)
                      |+|+|||++|++|+++++.|.+.|++|++++|......        ... .+++++.+|+++.+...++.+.. |+|+|+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~   71 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD--------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHL   71 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc--------ccc-cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence            34999999999999999999999999999999872211        111 46789999999999999999888 999999


Q ss_pred             Ccccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++...           +...|+.++.++++++.+.+ +++++++||...+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~  120 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVV  120 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceE
Confidence            97441           45689999999999999977 8999997765544

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.76  E-value=1.6e-18  Score=118.07  Aligned_cols=112  Identities=21%  Similarity=0.260  Sum_probs=80.6

Q ss_pred             EEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeE----EEEcccCChHHHHHHhc--ccCE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAH----LIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      |+||||+|.||+.++++|++.+ .+++++++++........+........++.    .+.+|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            6899999999999999999987 789999999733222222222222334443    45899999999999999  7999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |+|.|+.-+          ....|+.|+.|+++++.+.+ ++++|++|+-
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTD  129 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTD  129 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEEC
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccc
Confidence            999998432          34689999999999999999 9999999964

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.75  E-value=3e-17  Score=109.52  Aligned_cols=107  Identities=33%  Similarity=0.431  Sum_probs=87.9

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG   85 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   85 (124)
                      |+|+||+|.+|+.+++.|++.+++|+++.|++    .  .+..+.+...+++++.+|+.|++++.++++++|.|+++.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~----~--~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP----S--SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS----H--HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc----c--hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            68999999999999999999999999999997    1  12233344578899999999999999999999999999885


Q ss_pred             ccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           86 VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ..  ........++++++.+.| +++||++|...++
T Consensus        75 ~~--~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~  107 (233)
T PF05368_consen   75 SH--PSELEQQKNLIDAAKAAG-VKHFVPSSFGADY  107 (233)
T ss_dssp             SC--CCHHHHHHHHHHHHHHHT--SEEEESEESSGT
T ss_pred             ch--hhhhhhhhhHHHhhhccc-cceEEEEEecccc
Confidence            54  455777899999999999 9999998855443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.6e-17  Score=110.94  Aligned_cols=111  Identities=17%  Similarity=0.193  Sum_probs=86.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      .|+++||||+|+||++++++|+++|++|+++.|++     ...+........++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRP-----DALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999986     22222222223468899999999999888765       3


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                      +|+|||++|...              .++.|+.++.++++++.    +.+ ..++|++||..
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~  137 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEG  137 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcc
Confidence            799999998542              13468899999999973    344 57899988754

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.75  E-value=2.2e-17  Score=116.10  Aligned_cols=114  Identities=19%  Similarity=0.302  Sum_probs=85.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEE-EeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      ++++||||+|++|+++++.|+++|+++++ ++|......   ....... ...+++++.+|+.|++++.+++++  +|+|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN---LMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc---hhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            68999999999999999999999987554 444331110   1111111 124678899999999999999985  8999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHh---------CCccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREA---------GNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~ss~~~~  121 (124)
                      ||+||...          ..+.|+.++.++++++.+.         + +++++++||...|
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vy  138 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVY  138 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhc
Confidence            99998542          2357899999999999863         3 5799999986654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.75  E-value=2.3e-17  Score=124.45  Aligned_cols=117  Identities=15%  Similarity=0.259  Sum_probs=90.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh--cccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV--KRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~   78 (124)
                      .|+|+||||+|+||+++++.|+++  +++|++++|........  .........+++++.+|+.|++.+..++  .++|+
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~--~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK--NLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh--hhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            589999999999999999999987  68999888753111111  1111112357899999999999888876  57999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...          +.+.|+.++.++++++.+.+.++++|++||...|
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy  136 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY  136 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence            999998643          2357889999999999988657899999987654

>PRK06194 hypothetical protein; Provisional

Probab=99.75  E-value=6.1e-17  Score=110.83  Aligned_cols=116  Identities=10%  Similarity=0.062  Sum_probs=85.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+....    .+....+.  ..++.++.+|++|++++.++++.    
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL----DRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999976221    12222221  33577899999999999988864    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCC-----ccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGN-----VKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~-----~~~~i~~ss~~~~  121 (124)
                         +|+||||||...              .++.|+.++.++++++    .+.+.     ..+++++||...+
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  152 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL  152 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence               799999998542              1357788888877774    33431     1489998887544

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.75  E-value=6.9e-17  Score=108.72  Aligned_cols=116  Identities=14%  Similarity=0.103  Sum_probs=85.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |.+++++|||++|++|++++++|+++|++|++++|++...+    +.....  ...++.++.+|++|++++.++++    
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA----AAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH----HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999873221    111111  23568899999999999988876    


Q ss_pred             ---ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                         ++|+|||+++....              ++.|+.++.++.+.+    .+.+ .++++++||...+
T Consensus        78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~  144 (258)
T PRK12429         78 TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGL  144 (258)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhc
Confidence               47999999985321              245667755544444    4455 6899999976543

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.75  E-value=1.3e-17  Score=115.22  Aligned_cols=96  Identities=20%  Similarity=0.237  Sum_probs=80.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++| +|++++|..                   ..+.+|++|++.+.++++  ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~-------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS-------------------TDYCGDFSNPEGVAETVRKIRPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc-------------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            579999999999999999999999 788888764                   134689999999999998  5899999


Q ss_pred             eCccccc----------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVHF----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+....          ...|+.++.+++++|.+.+ + ++|++||..+|
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy  108 (299)
T PRK09987         61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVF  108 (299)
T ss_pred             CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEE
Confidence            9985421          2478899999999999998 4 79999987655

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=112.40  Aligned_cols=109  Identities=16%  Similarity=0.280  Sum_probs=84.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   74 (124)
                      +++++||||+|++|+++++.|+++|++|++++|++     ...+   .+...+++++.+|++|++++.++++        
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~-----~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKE-----EDVA---ALEAEGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHH---HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999986     2222   2223467899999999998888765        


Q ss_pred             ccCEEEEeCcccc--------------ceecchHH----HHHHHHHHHHhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILM----QLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||+|...              .++.|+.+    +..+++.+.+.+ ..++|++||...
T Consensus        76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~  138 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILG  138 (277)
T ss_pred             CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhh
Confidence            3699999997532              13466666    455666666666 679999998654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.6e-17  Score=113.15  Aligned_cols=116  Identities=16%  Similarity=0.040  Sum_probs=84.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+|+||.++++.|+++|++|++++|+....+.. .+.+.. ....++.++.+|++|.+++.++++      
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAA-AARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            467899999999999999999999999999999986222111 111111 123467899999999999988865      


Q ss_pred             -ccCEEEEeCcccc------------ceecchHH----HHHHHHHHHHhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH------------FRSHNILM----QLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                       ++|++|||||...            .++.|+.+    +..+++.+.+.+ ..++|++||..
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~  154 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGG  154 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHH
Confidence             4899999998431            24567777    445555555555 46999998754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-17  Score=110.46  Aligned_cols=115  Identities=9%  Similarity=0.073  Sum_probs=84.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++++++|||++|++|+++++.|+++|++|++++|+++...+. .+.... ...++.++++|++|++++.+++++      
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAV-ADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHHHHh-cCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999987322111 111111 134577899999999999888764      


Q ss_pred             -cCEEEEeCccccc--------------eecchHH----HHHHHHHH-HHhCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVHF--------------RSHNILM----QLKLVDAI-REAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~~--------------~~~~~~~----~~~~~~~~-~~~~~~~~~i~~ss~~  119 (124)
                       +|+||||+|....              .+.|+.+    +..+++.+ .+.+ .++++++||..
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~  146 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVH  146 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchh
Confidence             8999999985421              2356666    55566666 5555 68999999753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.74  E-value=4.7e-17  Score=114.33  Aligned_cols=116  Identities=20%  Similarity=0.277  Sum_probs=85.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi   80 (124)
                      |+++||||+|++|+++++.|+++|++ |+.+++.............  ....+++++.+|++|.+++.+++++  +|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV--SDSERYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhc--ccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            47999999999999999999999965 5555553211111111111  0124578899999999999999974  89999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHh--------CCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREA--------GNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~ss~~~~  121 (124)
                      |+|+...          ..+.|+.++.+++++|.+.        +.++++|++||...|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy  137 (352)
T PRK10084         79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY  137 (352)
T ss_pred             ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence            9998532          3567899999999999874        125689999987554

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.3e-16  Score=107.08  Aligned_cols=117  Identities=17%  Similarity=0.095  Sum_probs=87.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|+.+...+...+.+.. ...++.++++|+++++++.++++      
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            34678999999999999999999999999999988752211111111111 13457889999999999988876      


Q ss_pred             -ccCEEEEeCccc--------cceecchHHHHHHHHHHHHhC-CccEEEEecCC
Q 033236           75 -RVDVVICTISGV--------HFRSHNILMQLKLVDAIREAG-NVKKRKLNEGM  118 (124)
Q Consensus        75 -~~d~vi~~a~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~  118 (124)
                       ++|++||+++..        ...+.|..++.++++++.+.- ...++|++||.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence             489999999743        235678999999999998752 12489988874

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.74  E-value=7e-17  Score=110.12  Aligned_cols=114  Identities=19%  Similarity=0.190  Sum_probs=86.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|+++     ............+..+++|++|++++.++++      
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTA-----TLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            77889999999999999999999999999999999862     1221212123457888999999999888765      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||+|....              ++.|+.++..+++.+    .+.+ .+++|++||...
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~  139 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGG  139 (275)
T ss_pred             CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhh
Confidence             37999999985421              346788877777665    4455 578999997653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.74  E-value=4.8e-17  Score=112.25  Aligned_cols=115  Identities=20%  Similarity=0.308  Sum_probs=86.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI   80 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi   80 (124)
                      +++||||+|++|++++++|++.|  ++|++++|..........+..  ....+++++.+|++|++++.+++++  +|+||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADL--EDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhh--ccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            58999999999999999999887  789888764311111111111  1124688999999999999999987  89999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+++...          +.+.|+.++.++++++.+.+...+++++||...|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~  129 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVY  129 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecccee
Confidence            9998543          2356889999999999887522389999976544

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.73  E-value=3.8e-17  Score=118.12  Aligned_cols=109  Identities=18%  Similarity=0.305  Sum_probs=84.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|+|+||||+|+||++++++|+++|++|++++|......+   .....+...+++++.+|+.++.     +.++|+|||+
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHl  190 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHL  190 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----hcCCCEEEEe
Confidence            5789999999999999999999999999999876422111   1111223456888999987653     4579999999


Q ss_pred             Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...          ..+.|+.++.+++++|.+.+ + ++|++||...|
T Consensus       191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VY  237 (442)
T PLN02206        191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVY  237 (442)
T ss_pred             eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHh
Confidence            97431          23578999999999999998 5 89999988765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.73  E-value=7.3e-17  Score=108.64  Aligned_cols=118  Identities=19%  Similarity=0.189  Sum_probs=81.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |.+|+++||||+|+||+++++.|+++|++|++++|++...+....+.........+.++.+|++|++++.+++++     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            346889999999999999999999999999999988632211111111111233466789999999999988864     


Q ss_pred             --cCEEEEeCcccc-----------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236           76 --VDVVICTISGVH-----------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 --~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~  119 (124)
                        +|++||||+...                 ..+.|..+...+++    .+.+.+ .++++++||..
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~  147 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIY  147 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechh
Confidence              799999996421                 12334555544444    444455 57999999754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.73  E-value=1.1e-16  Score=105.96  Aligned_cols=115  Identities=13%  Similarity=0.117  Sum_probs=88.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|.++||||+++||.++++.|++.|++|++..|+.    +.......++....+..+..|++|+++++++++       +
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~----drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARRE----ERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH----HHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            46789999999999999999999999999999997    222222222233467899999999998777765       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~~  122 (124)
                      +|++|||||...              ..+.|+.|..+..+++.+    ++ ..++|.+||....+
T Consensus        82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~  145 (246)
T COG4221          82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY  145 (246)
T ss_pred             ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccc
Confidence            899999998431              246789998888877754    44 45999999887443

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.9e-17  Score=110.43  Aligned_cols=107  Identities=21%  Similarity=0.259  Sum_probs=85.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +++++||||+|++|+++++.|+++|++|++++|++...        .  ...+++++++|++|++++++++++       
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~--------~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA--------A--PIPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------c--ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            56799999999999999999999999999999986211        1  124678999999999999998874       


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                      +|++|||+|...              .++.|..++.++++++    .+.+ .+++|++||...
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~  135 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLG  135 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccc
Confidence            699999998642              1346777777777775    4455 679999998653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.8e-17  Score=121.49  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=88.4

Q ss_pred             ceEEEEccCChhcHHHHHHHh--hCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh------HHHHHHhcc
Q 033236            4 SKVLVVGGTGYIGRRIVKASL--AQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH------RSLVEAVKR   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~   75 (124)
                      |+++||||+|+||+++++.|+  +.|++|++++|++..  .........+...+++++.+|+.|+      +.++++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            589999999999999999999  578999999996521  1111111112235789999999984      466666 88


Q ss_pred             cCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+|||+|+..+       ....|+.++.++++++.+.+ +++++++||...|
T Consensus        78 ~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~  129 (657)
T PRK07201         78 IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVA  129 (657)
T ss_pred             CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccc
Confidence            999999998543       24578999999999999998 7999999987654

>PLN02996 fatty acyl-CoA reductase

Probab=99.73  E-value=1.1e-16  Score=117.00  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=90.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHH-H-H------hh-----------hhccCCeEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKL-Q-M------LL-----------SFKKQGAHLI   59 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~-~-~------~~-----------~~~~~~~~~~   59 (124)
                      .+++++||||+|++|+++++.|++.+   .+|+++.|.....+.... . .      ..           .+...+++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            46899999999999999999998764   478999998754332211 0 0      00           0112578999


Q ss_pred             EcccC-------ChHHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           60 EASFA-------DHRSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        60 ~~D~~-------~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .+|++       +.+.+..+++++|+|||+|+..+.       ...|+.++.++++++.+.+.+++++++||..+|
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            99998       445577888999999999986543       357899999999999886337899999987765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=5.3e-17  Score=117.76  Aligned_cols=116  Identities=23%  Similarity=0.283  Sum_probs=95.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      .+|+++||||+|.+|+.+++++++.+ .++++++|++.....-..+....++...+..+-+|+.|.+.+.+++++  +|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            47899999999999999999999987 788999999733322233333333346788999999999999999998  999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |+|.|+.-+          ....|+.|++|++++|.+.+ +++++.+|+-
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTD  377 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTD  377 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecC
Confidence            999998432          24579999999999999999 9999999963

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.72  E-value=1.6e-16  Score=106.07  Aligned_cols=114  Identities=14%  Similarity=0.144  Sum_probs=85.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      |++++++|||++|++|+++++.|+++|++|++++|++...    .......  ...++.++.+|++|++++.+++++   
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA----EALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4457899999999999999999999999999999987221    1111111  134578999999999998888764   


Q ss_pred             ----cCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                          +|++||++|....              ++.|+.+..++++++.    +.+ .++++++||..
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~  143 (246)
T PRK05653         79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVS  143 (246)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHH
Confidence                5999999975421              3456777888887775    345 57999998754

>PRK05865 hypothetical protein; Provisional

Probab=99.72  E-value=9.9e-17  Score=122.58  Aligned_cols=103  Identities=23%  Similarity=0.262  Sum_probs=89.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|++|+++++.|+++|++|++++|+...       .    ...+++++.+|+.|++++.++++++|+|||+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~-------~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA   69 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD-------S----WPSSADFIAADIRDATAVESAMTGADVVAHCA   69 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh-------h----cccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence            579999999999999999999999999999987511       0    12357899999999999999999999999999


Q ss_pred             cccc-ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           84 SGVH-FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        84 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +... ..+.|+.++.++++++.+.+ ++++|++||.
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~  104 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSG  104 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCc
Confidence            7543 45678999999999999998 8899999975

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.72  E-value=2.4e-16  Score=105.68  Aligned_cols=115  Identities=21%  Similarity=0.175  Sum_probs=86.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|++|.++++.|+++|++|++++|++...    ......+  ....+.++.+|++|++++.++++    
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA----AATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999986221    1111111  12458899999999999999886    


Q ss_pred             ---ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                         ++|+|||++|....              .+.|+.+..++++++.    +.+ .++++++||...
T Consensus        80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~  145 (251)
T PRK12826         80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAG  145 (251)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHh
Confidence               58999999975431              2456777777887774    344 578998887654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.72  E-value=1.1e-16  Score=115.54  Aligned_cols=109  Identities=18%  Similarity=0.317  Sum_probs=83.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|+|+||||+|+||+++++.|+++|++|++++|...+.... ..  ......+++++.+|+.++     .+.++|+|||+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~-~~--~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl  191 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKEN-LV--HLFGNPRFELIRHDVVEP-----ILLEVDQIYHL  191 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhH-hh--hhccCCceEEEECccccc-----cccCCCEEEEC
Confidence            47899999999999999999999999999999864221111 11  111234678888998665     34679999999


Q ss_pred             Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...          .++.|+.++.+++++|.+.+ + ++|++||..+|
T Consensus       192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VY  238 (436)
T PLN02166        192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVY  238 (436)
T ss_pred             ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHh
Confidence            97432          23578999999999999988 4 89999987665

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=2.3e-16  Score=105.35  Aligned_cols=119  Identities=18%  Similarity=0.177  Sum_probs=86.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|++|++++++|+++|++|+++.|+.........+... ....++.++.+|+++++++.++++      
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE-ALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH-hcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            4467899999999999999999999999998877776221111111111 123568899999999999988875      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++||++|....              .+.|..+..++.+.+    .+.+ .++++++||...+
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~  147 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGL  147 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccC
Confidence             47999999984321              235667777777776    3455 6899999976543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=108.77  Aligned_cols=116  Identities=15%  Similarity=0.149  Sum_probs=84.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|++...+.. ........ +.+++++.+|++|++++.+ ++     
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENL-LSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence            7788899999999999999999999999999999986221111 11111111 2468899999999998876 43     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                        ++|++|||+|...              ..+.|+.++.++++.+    .+.+ ..+++++||..
T Consensus        79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~  142 (280)
T PRK06914         79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSIS  142 (280)
T ss_pred             cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccc
Confidence              3799999998532              1246777877777775    4455 57899988754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.8e-16  Score=104.56  Aligned_cols=113  Identities=18%  Similarity=0.155  Sum_probs=86.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++|+|++|++|+++++.|+++|++|++++|++.    ...+..+.+...+.+++.+|+.|.+++.++++       +
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAA----PLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChH----hHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999872    22222223334567888999999999988876       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      +|+|+|++|...              .+..|..++.++++++.+    .+ .++++++||...
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~  144 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAA  144 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHh
Confidence            899999998532              133567777777777753    44 679999997653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.71  E-value=1.3e-16  Score=109.31  Aligned_cols=100  Identities=19%  Similarity=0.243  Sum_probs=83.6

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh------cc-cC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV------KR-VD   77 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~-~d   77 (124)
                      +++||||+|++|++++++|++.|++|++++|+++..           ...+++.+.+|+.|++++.+++      ++ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-----------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-----------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-----------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence            489999999999999999999999999999998321           1246778889999999999998      56 99


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      .++++++...   .......++++++.+.| ++|+|++|+..
T Consensus        70 ~v~~~~~~~~---~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~  107 (285)
T TIGR03649        70 AVYLVAPPIP---DLAPPMIKFIDFARSKG-VRRFVLLSASI  107 (285)
T ss_pred             EEEEeCCCCC---ChhHHHHHHHHHHHHcC-CCEEEEeeccc
Confidence            9999987432   22456788999999999 89999999754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.71  E-value=5e-17  Score=109.65  Aligned_cols=110  Identities=21%  Similarity=0.300  Sum_probs=74.6

Q ss_pred             EEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchH-HH-HHhh------h---hccCCeEEEEcccCCh------HH
Q 033236            8 VVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDID-KL-QMLL------S---FKKQGAHLIEASFADH------RS   68 (124)
Q Consensus         8 i~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~-~~-~~~~------~---~~~~~~~~~~~D~~~~------~~   68 (124)
                      ||||+|++|++++++|++.+.  +|+|+.|..+..+.. +. +.+.      .   ....+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999875  999999987431111 11 0110      0   1257899999999975      57


Q ss_pred             HHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           69 LVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        69 ~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +..+.+++|+|||||+.+++       .+.|+.|++++++.|.+.+ .++++|+||.
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa  136 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTA  136 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEG
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccc
Confidence            88888899999999987654       4679999999999999766 5699999984

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06128 oxidoreductase; Provisional

Probab=99.71  E-value=2.7e-16  Score=108.56  Aligned_cols=119  Identities=15%  Similarity=0.132  Sum_probs=87.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH-HHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID-KLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++..++....... ..+.... ...++.++.+|+++++++.++++      
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999998887765221111 1111211 23457789999999999888875      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                       ++|++|||+|...               .++.|+.++.++++++.+.- .-.++|++||...|
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~  196 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY  196 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc
Confidence             4799999998531               24568889999999997642 12589999887654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.8e-16  Score=104.55  Aligned_cols=119  Identities=16%  Similarity=0.139  Sum_probs=88.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|+++.|..........+.....  ....+.++.+|+++++++.++++     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999998765422212211111111  13468899999999999988875     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH-----HhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR-----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ss~~~~  121 (124)
                        ++|+|||++|...              .++.|..++.++++++.     +.+ .++++++||...+
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~  151 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGV  151 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhc
Confidence              4899999998643              13567888999998887     344 5789999876543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=1.5e-16  Score=106.68  Aligned_cols=115  Identities=17%  Similarity=0.159  Sum_probs=85.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      .+++++||||+|++|.++++.|+++|++|++++|++...    ......+. ..++.++.+|++|++++.++++      
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA----ERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999987221    11111111 3457899999999999998876      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                       ++|+|||++|...               .++.|+.++.++.+.+.+    .+ .++++++||...+
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~  145 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGL  145 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc
Confidence             3799999998531               134566776666666654    44 5789999876543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-16  Score=106.52  Aligned_cols=114  Identities=16%  Similarity=0.072  Sum_probs=85.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++|+++|||++|+||+++++.|+++|++|++++|++..    ..+....+    ...++.++++|++|++++..+++   
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL----AERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998622    11222222    23457899999999999988876   


Q ss_pred             ----ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 ----RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ----~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                          ++|++|||+|....              ++.|+.++..+++++.+    .+ ..++|++||...
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  148 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHA  148 (260)
T ss_pred             HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhh
Confidence                48999999985321              34577777777777654    33 468999987643

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.6e-16  Score=110.40  Aligned_cols=117  Identities=13%  Similarity=0.136  Sum_probs=85.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      |++++++||||+++||.++++.|+++|++|++.+|+.+..+... +.+... ....+.++.+|++|.++++++++.    
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAV-AAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999863221111 111111 124578999999999999888753    


Q ss_pred             ---cCEEEEeCcccc-------------ceecchHHHHHHHHHHHH---hCCccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH-------------FRSHNILMQLKLVDAIRE---AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~  119 (124)
                         +|++|||||...             .++.|+.+...+.+.+.+   .+ ..++|++||..
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~  152 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIA  152 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechh
Confidence               899999998542             134577777776666653   22 35888888764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.8e-16  Score=107.38  Aligned_cols=117  Identities=15%  Similarity=0.150  Sum_probs=87.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      |++++++||||+|+||+++++.|+++|++|++.+|+++..    .+..+.+.  ..++.++.+|++|++++.++++.   
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l----~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL----RQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999886221    12222222  23577899999999999888764   


Q ss_pred             ----cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 ----VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ----~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                          +|++|||||...              .++.|+.+..++++++.+    .+...+++++||...+
T Consensus        80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~  147 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL  147 (275)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence                799999998531              135678888888888753    3313589999876543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.71  E-value=3.5e-16  Score=105.49  Aligned_cols=113  Identities=19%  Similarity=0.196  Sum_probs=86.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++++++||||+|++|+++++.|+++|++|++++|++.    ........+.  +.++..+.+|++|++++.+++++    
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA----KLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999862    2111122222  23578899999999999988764    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                         +|++||++|...              .+..|..++.++++++.+.    + ..+++++||..
T Consensus        85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  148 (255)
T PRK07523         85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQ  148 (255)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccch
Confidence               799999998532              1246778888888887653    4 56899998754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.8e-16  Score=102.86  Aligned_cols=112  Identities=21%  Similarity=0.197  Sum_probs=84.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      +++++|+||+|++|+++++.|++.|++|++++|++.    ...+....+. ..++.++++|+++++++.++++       
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQK----ELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHH----HHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999862    2112222221 1568899999999999888776       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~  119 (124)
                      ++|+|||++|...              .++.|+.+...+++++.+.   + ..+++++||..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~  142 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLA  142 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChh
Confidence            5899999998542              1345777778888777643   3 46788888764

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.4e-16  Score=104.52  Aligned_cols=116  Identities=16%  Similarity=0.117  Sum_probs=87.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|++|.++++.|+++|++|++++|++..    ..+..+.+  ...++..+.+|+++++++.++++     
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEG----AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998621    11111111  12356789999999999888776     


Q ss_pred             --ccCEEEEeCcccc-----------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH-----------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~~  121 (124)
                        ++|+|||++|...                 ..+.|+.++.++++++.+..   ..++++++||...|
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  149 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW  149 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc
Confidence              4799999998531                 13578888888888887541   13689999987654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.5e-16  Score=103.52  Aligned_cols=111  Identities=22%  Similarity=0.287  Sum_probs=80.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   77 (124)
                      |++|+++||||+|++|+++++.|+++ ++|++++|++.    . .+.... ....++++++|++|++++.++++   ++|
T Consensus         1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~----~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id   73 (227)
T PRK08219          1 MERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAE----R-LDELAA-ELPGATPFPVDLTDPEAIAAAVEQLGRLD   73 (227)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHH----H-HHHHHH-HhccceEEecCCCCHHHHHHHHHhcCCCC
Confidence            66789999999999999999999999 99999999861    1 111111 12357899999999999999887   599


Q ss_pred             EEEEeCccccc--------------eecchHHH----HHHHHHHHHhCCccEEEEecCCcc
Q 033236           78 VVICTISGVHF--------------RSHNILMQ----LKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        78 ~vi~~a~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +|||++|....              .+.|..+.    .++++.+.+.+  .+++++||...
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~  132 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAG  132 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHh
Confidence            99999985421              23445554    34444444443  68888887553

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-16  Score=105.56  Aligned_cols=116  Identities=19%  Similarity=0.186  Sum_probs=87.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...    .+......  ..++..+.+|++|++++.++++    
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL----DEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999986221    11111211  3467899999999999888775    


Q ss_pred             ---ccCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC--CccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG--NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~  120 (124)
                         ++|++||++|....               ++.|..+...+++++.+..  ...++|++||...
T Consensus        79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~  144 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL  144 (258)
T ss_pred             HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh
Confidence               47999999985321               3467788888888887531  1258999987653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.7e-16  Score=104.67  Aligned_cols=114  Identities=18%  Similarity=0.138  Sum_probs=84.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|+++    ...+........++.++.+|++|++++.++++      
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA----ALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999862    11121222222367889999999999888775      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCc-cEEEEecCCc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNV-KKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~-~~~i~~ss~~  119 (124)
                       ++|+|||++|...               .++.|..++.++.+++.+    .+ . ++++++||..
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~  149 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVA  149 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccc
Confidence             5899999998651               134567787777777643    33 3 5677777644

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.70  E-value=4.2e-16  Score=108.56  Aligned_cols=114  Identities=16%  Similarity=0.161  Sum_probs=85.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++++++||||+|+||.++++.|+++|++|++++|+...    .....+.+  ....+.++.+|+++.+++.++++.    
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK----AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999998621    11112222  234688999999999999888763    


Q ss_pred             ---cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CC-ccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GN-VKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~-~~~~i~~ss~~  119 (124)
                         +|++|||||...               .++.|+.++.++++.+.+.    +. ..|+|++||..
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~  147 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVT  147 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccc
Confidence               899999998431               1357788888887777652    21 24899998754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.70  E-value=5.1e-16  Score=104.89  Aligned_cols=113  Identities=18%  Similarity=0.180  Sum_probs=86.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+||.++++.|+++|++|++++|+++    ........+  ...++.++.+|++|+++++++++     
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE----ELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999762    111111111  23467789999999999977665     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh-----CCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA-----GNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ss~~  119 (124)
                        ++|++||++|...              .++.|..++.++++++.+.     + ..+++++||..
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~  151 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVA  151 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChh
Confidence              4799999998531              1347788899999987654     4 56899998754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.7e-16  Score=105.83  Aligned_cols=113  Identities=12%  Similarity=0.013  Sum_probs=83.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++.+|++     ...+..... -.++.++.+|++|++++.++++      
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDE-----ALAKETAAE-LGLVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHH-hccceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4568899999999999999999999999999999986     222111110 1257889999999998877765      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||+|...              .++.|+.+...+++.+.    +.+ ..+++++||...
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~  140 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAG  140 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccc
Confidence             3799999998542              13456777666666654    445 568999997654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.6e-16  Score=105.09  Aligned_cols=112  Identities=18%  Similarity=0.148  Sum_probs=83.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.... .++.++.+|++|++++.++++.      
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD----ALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999862    21122222221 1688999999999999888764      


Q ss_pred             -cCEEEEeCcccc---------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVH---------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~---------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~  119 (124)
                       +|++||++|...               ..+.|+.++.++++    .+.+.+ ..+++++||..
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~  140 (257)
T PRK07024         78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVA  140 (257)
T ss_pred             CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechh
Confidence             799999998532               12456777777666    444454 57899888754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.70  E-value=8.3e-16  Score=103.36  Aligned_cols=110  Identities=18%  Similarity=0.165  Sum_probs=81.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      |+++||||+|++|.++++.|+++|++|++++|++     ...+........++.++.+|++|++++.++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ-----ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999986     22222222123468899999999999888775       58


Q ss_pred             CEEEEeCcccc---------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           77 DVVICTISGVH---------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        77 d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                      |++||++|...               .++.|..++.++++.+    .+.+ ..+++++||..
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~  136 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTA  136 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcc
Confidence            99999998531               1345666755555555    4455 57899998764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.9e-16  Score=107.07  Aligned_cols=113  Identities=15%  Similarity=0.115  Sum_probs=83.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|+...    ..+..+.+.  ...+.++.+|++|++++.++++     
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~----l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL----LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998622    111111111  2357789999999999988887     


Q ss_pred             --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                        ++|++|||+|...                .++.|..+..++++++.    +.+ ..+++++||..
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~  180 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWG  180 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChh
Confidence              5899999998531                12346667666666554    455 57899998753

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.5e-16  Score=104.43  Aligned_cols=117  Identities=19%  Similarity=0.232  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|++|+++++.|+++|++|++.+|++...+....+........++.++.+|+++++++.++++       
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999862211111111111123468899999999998888765       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                      ++|++||++|...              .++.|+.+..++++++.    +.+ ..+++++||..
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~  142 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVS  142 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccc
Confidence            4899999998432              13467777777777764    345 57899888754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.6e-16  Score=104.99  Aligned_cols=113  Identities=14%  Similarity=0.088  Sum_probs=84.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+|++|+++++.|+++|++|+++.|+.+.    ........ ...++..+++|++|++++.++++      
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEA----AERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999998622    11111111 23457899999999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                       ++|+|||++|...              .++.|+.++.++.+.+    .+.+ .++++++||..
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~  142 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQL  142 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChh
Confidence             5899999998532              1346677776666555    3455 57899998753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.8e-16  Score=104.10  Aligned_cols=114  Identities=17%  Similarity=0.192  Sum_probs=86.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|++|.++++.|+++|++|++++|++..    ..+....+  ...++.++.+|+++++++.++++    
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ----LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999998621    11111111  13468899999999999988776    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH-----hCCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE-----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~ss~~  119 (124)
                         ++|+|||+||...              .++.|..++.++.+++.+     .+ ..+++++||..
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~  149 (263)
T PRK07814         84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTM  149 (263)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEcccc
Confidence               4799999998431              134678888888888864     33 46899888754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=4.2e-16  Score=105.53  Aligned_cols=116  Identities=18%  Similarity=0.235  Sum_probs=90.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      |+++||||+||||++.+++++++.  .+|++++.-.-....+...  .-..+++..++++|+.|.+.+.++++  ++|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~--~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA--DVEDSPRYRFVQGDICDRELVDRLFKEYQPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH--hhhcCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence            679999999999999999999875  5577777654221122222  22235789999999999999999998  59999


Q ss_pred             EEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|.|+..          .+.+.|+.|+.++++++++....-||+++|+-=+|
T Consensus        79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVY  130 (340)
T COG1088          79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVY  130 (340)
T ss_pred             EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccc
Confidence            9999754          35689999999999999999822389999975444

>PRK05717 oxidoreductase; Validated

Probab=99.69  E-value=5.3e-16  Score=104.64  Aligned_cols=114  Identities=15%  Similarity=0.127  Sum_probs=85.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+. ...++.++.+|+++++++.++++.      
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~----~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE----RGSKVAKA-LGENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHH-cCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999988762    11111111 234678999999999988776543      


Q ss_pred             -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~  120 (124)
                       +|++|||+|...                .++.|+.++.++++++.+.  ....++|++||...
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~  147 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRA  147 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhh
Confidence             799999998542                2346788999999998642  11357888887654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=6.2e-16  Score=103.78  Aligned_cols=117  Identities=16%  Similarity=0.077  Sum_probs=84.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++. .|++... +...+... ....++.++.+|++|++++.++++     
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAA-EETAEEIE-ALGRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            557899999999999999999999999998764 5654111 11111111 123468899999999999988876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~  119 (124)
                        ++|+|||++|...              .++.|..++.++++++.+..   ..++++++||..
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  143 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLG  143 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchh
Confidence              3799999998532              13467788888888886532   145999998754

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.6e-16  Score=105.17  Aligned_cols=111  Identities=14%  Similarity=0.071  Sum_probs=84.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--------c
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------R   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~   75 (124)
                      |+++||||+|++|+++++.|+++|++|++++|++.    ...+........++.++.+|++|.+++.++++        +
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEA----GLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999872    21121122224568899999999998888765        3


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      +|+||||+|...              .+..|+.++.++++++.+    .+ ..+++++||..
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~  138 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSAS  138 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchh
Confidence            699999998542              134677888888777753    33 46888888754

>PRK12320 hypothetical protein; Provisional

Probab=99.69  E-value=3.6e-16  Score=117.45  Aligned_cols=101  Identities=20%  Similarity=0.184  Sum_probs=84.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|+||+++++.|+++|++|++++|.+.        .   ....+++++.+|+.++. +.++++++|+|||++
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~--------~---~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA   68 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH--------D---ALDPRVDYVCASLRNPV-LQELAGEADAVIHLA   68 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh--------h---cccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence            47999999999999999999999999999998751        1   11346889999999985 788888999999999


Q ss_pred             cccc--ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           84 SGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        84 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +...  ....|+.++.+++++|.+.+ + ++|++||.
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~  103 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAG-A-RLLFVSQA  103 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcC-C-eEEEEECC
Confidence            8532  22468899999999999998 5 68888865

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.69  E-value=4.5e-16  Score=115.61  Aligned_cols=120  Identities=15%  Similarity=0.159  Sum_probs=90.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHH--Hhh------h-----------hccCCeEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQ--MLL------S-----------FKKQGAHLI   59 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~--~~~------~-----------~~~~~~~~~   59 (124)
                      .+++++||||+|++|+++++.|++.+   .+|+++.|.....+....-  .+.      .           +...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            46899999999999999999999865   3789999976432211111  100      0           012468899


Q ss_pred             EcccCCh------HHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           60 EASFADH------RSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        60 ~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .+|++++      ++.+.+.+++|+|||+|+..++       .+.|+.++.++++.+.+.+.+++++++||..+|
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy  272 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN  272 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence            9999987      4677777889999999987643       356899999999999887547899999987665

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.69  E-value=6.6e-16  Score=103.58  Aligned_cols=116  Identities=19%  Similarity=0.192  Sum_probs=88.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|+..    ...+.....  ...++.++.+|++++++++++++    
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   76 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNRE----AAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ   76 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998862    221111111  23568899999999999988875    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++||++|...              .++.|+.+..++++++.    +.+ .++++++||...+
T Consensus        77 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~  143 (250)
T TIGR03206        77 ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAAR  143 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhc
Confidence               4899999998431              13467788888777765    344 5789999976543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02253 xanthoxin dehydrogenase

Probab=99.69  E-value=9.6e-16  Score=104.65  Aligned_cols=115  Identities=13%  Similarity=0.068  Sum_probs=85.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+. ..++.++++|++|++++.++++     
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDD----LGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999998762    2112222222 2468899999999999988876     


Q ss_pred             --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~  119 (124)
                        ++|++|||+|...                .++.|+.++.++++++.+..   ...+++++||..
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~  157 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA  157 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh
Confidence              4899999998531                13567888888888776431   135788877644

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.69  E-value=5e-16  Score=107.55  Aligned_cols=113  Identities=28%  Similarity=0.470  Sum_probs=87.2

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   82 (124)
                      +++|+||+|++|+++++.|+++|++|++++|...... .......  ...+++++.+|+++++++.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP-EALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch-hhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            5899999999999999999999999988876442111 1111111  11257889999999999999987  59999999


Q ss_pred             Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|...          .+..|+.++.++++++.+.+ +++++++||...|
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~  125 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVY  125 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhc
Confidence            98542          23568899999999999888 7899999976544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.69  E-value=6e-16  Score=104.37  Aligned_cols=116  Identities=14%  Similarity=0.171  Sum_probs=85.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+++||+++++.|+++|++|++++|+..   +......+. ...++.++.+|+++++++.++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---PETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---HHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999999999887641   111122211 23467899999999999998876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                       ++|++|||+|...              .++.|+.+...+.+.+.+.    +...++|++||...
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~  146 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS  146 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh
Confidence             3799999998532              1457788877777776542    21258999987653

>PLN00016 RNA-binding protein; Provisional

Probab=99.69  E-value=2.8e-16  Score=111.68  Aligned_cols=109  Identities=23%  Similarity=0.277  Sum_probs=82.7

Q ss_pred             CceEEEE----ccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHH---HHHhhhhccCCeEEEEcccCChHHHHHHh--
Q 033236            3 KSKVLVV----GGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDK---LQMLLSFKKQGAHLIEASFADHRSLVEAV--   73 (124)
Q Consensus         3 ~~~ili~----Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--   73 (124)
                      +++++||    ||+|++|+++++.|+++|++|++++|++.......   ......+...+++++.+|+.|   +.+++  
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~  128 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG  128 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence            4789999    99999999999999999999999999873211000   001112223468899999876   44443  


Q ss_pred             cccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           74 KRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        74 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .++|+|||+++      .+..++.++++++.+.| ++++|++||...|
T Consensus       129 ~~~d~Vi~~~~------~~~~~~~~ll~aa~~~g-vkr~V~~SS~~vy  169 (378)
T PLN00016        129 AGFDVVYDNNG------KDLDEVEPVADWAKSPG-LKQFLFCSSAGVY  169 (378)
T ss_pred             CCccEEEeCCC------CCHHHHHHHHHHHHHcC-CCEEEEEccHhhc
Confidence            46999999986      34677899999999999 8999999987655

>PRK06196 oxidoreductase; Provisional

Probab=99.69  E-value=6.6e-16  Score=107.29  Aligned_cols=111  Identities=18%  Similarity=0.186  Sum_probs=82.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||.++++.|+++|++|++++|++.    ...+....+  .++.++++|++|.++++++++       
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~----~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD----VAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999999862    211111111  247899999999999988774       


Q ss_pred             ccCEEEEeCcccc------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                      ++|++|||||...            .++.|+.+...+.+.+    .+.+ ..++|++||..
T Consensus        99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~  158 (315)
T PRK06196         99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAG  158 (315)
T ss_pred             CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHH
Confidence            4899999998531            1346777765555544    4444 46899998753

>PRK06398 aldose dehydrogenase; Validated

Probab=99.69  E-value=7.4e-16  Score=104.29  Aligned_cols=106  Identities=10%  Similarity=0.158  Sum_probs=84.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+...             ..++.++++|++|++++.++++       
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999999998621             1257899999999999888775       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||+|...              .++.|..++..+++++.+    .+ ..++|++||...+
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  135 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSF  135 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhc
Confidence            4899999998532              135678888888777754    33 4689999976543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8e-16  Score=104.25  Aligned_cols=113  Identities=18%  Similarity=0.185  Sum_probs=84.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++..    ..+.... ...++.++.+|+++++++.++++       
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN----GAAVAAS-LGERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHH-hCCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999998621    1111111 23467899999999999988876       


Q ss_pred             ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH-------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~  119 (124)
                      .+|++|||+|...             .++.|+.+..++++++.+.  ..-.++|++||..
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            3799999998531             1345777777777776542  1135889888754

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5.1e-16  Score=104.60  Aligned_cols=114  Identities=16%  Similarity=0.187  Sum_probs=82.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~   81 (124)
                      +++++||||+|++|+++++.|++.|++|++++|++...  ............++.++.+|++|++++.++++ ++|+|||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV--TALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence            57899999999999999999999999999999986211  11111111123458899999999999999887 7999999


Q ss_pred             eCcccc--------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236           82 TISGVH--------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        82 ~a~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~  119 (124)
                      |+|...              .++.|..+..++.+    .+.+.+ .+++|++||..
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~  134 (257)
T PRK09291         80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMA  134 (257)
T ss_pred             CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChh
Confidence            998542              12345666555544    444555 57999998754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.69  E-value=8.8e-16  Score=103.02  Aligned_cols=117  Identities=16%  Similarity=0.178  Sum_probs=86.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||.+++++|+++|++|++++|++.   ....+.... ...++..+.+|+++++++.++++      
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---SETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---HHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999998651   111111111 23468899999999999987765      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                       ++|++||++|...              .++.|..+..++++++.+.    +...+++++||...+
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  144 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF  144 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc
Confidence             3899999998532              1356788888888887642    212588988876543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.4e-16  Score=106.61  Aligned_cols=119  Identities=16%  Similarity=0.159  Sum_probs=85.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++++++|||++|+||+++++.|+++|++|++++|++...... .+...... ..++.++.+|++|++++.++++     
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAA-AEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999986221111 11111111 2467899999999999988876     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                        ++|++||++|...               .++.|..+...+++++.+..   ...+++++||...
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~  149 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA  149 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh
Confidence              5799999998431               12456777877877765532   1358999887643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.1e-15  Score=102.86  Aligned_cols=118  Identities=19%  Similarity=0.152  Sum_probs=85.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+|+++|||++|++|+++++.|+++|++|++++|+..+......+.... ...++.++.+|+++++++.++++       
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999998752211111121111 23468899999999999888775       


Q ss_pred             ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh----CC-----ccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREA----GN-----VKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~----~~-----~~~~i~~ss~~~  120 (124)
                      ++|++|||+|...                .++.|+.++.++++++.+.    ..     ..+++++||...
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  150 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA  150 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhh
Confidence            4799999998531                1356788888888877543    10     357899987654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.69  E-value=1.1e-15  Score=102.14  Aligned_cols=116  Identities=17%  Similarity=0.121  Sum_probs=85.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++|||++|++|+++++.|+++|++|+++.|++........+... ....++..+.+|+++++++.++++       
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG-ALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999998888876221111111111 123568899999999999988876       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                      ++|+|||++|....              .+.|+.+..++.+++.+.    + .++++++||..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~  144 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVV  144 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccc
Confidence            47999999985321              235677888888887653    3 46799988754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.69  E-value=4.9e-16  Score=108.96  Aligned_cols=116  Identities=16%  Similarity=0.290  Sum_probs=88.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCch-HHHH-Hhhhh-----c-c-CCeEEEEcccCCh------H
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDI-DKLQ-MLLSF-----K-K-QGAHLIEASFADH------R   67 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~-~~~~-~~~~~-----~-~-~~~~~~~~D~~~~------~   67 (124)
                      +++||||+|++|+++++.|+++|  ++|+++.|+.+.... .+.. ..+..     . . .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  789999998642110 0111 11110     0 1 4789999999754      5


Q ss_pred             HHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           68 SLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        68 ~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .+..+.+++|+|||+++....       ...|+.++.++++++.+.+ +++++++||...|
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEcccccc
Confidence            677778899999999986542       3578999999999999887 7889999987654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=102.43  Aligned_cols=115  Identities=14%  Similarity=0.072  Sum_probs=85.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      .+++++|||++|++|+++++.|+++|++|++++|++..    .......+.  ..++..+.+|++|++++.++++     
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE----ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999887622    111111211  3468899999999999988875     


Q ss_pred             --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                        ++|++||++|....              .+.|..+..++++++.+..   ...+++++||...
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  146 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA  146 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh
Confidence              48999999985421              2467788888888876532   1348999987543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=102.27  Aligned_cols=112  Identities=19%  Similarity=0.197  Sum_probs=86.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++||||+|+||.++++.|+++|++|++++|++.     ............+..+.+|+++++++.++++       
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-----VAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999862     1222222233456789999999999888875       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                      ++|++||++|...              ..+.|+.+..++++++.+.    + ..+++++||..
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  150 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQA  150 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchh
Confidence            4799999998542              1346778888888887653    4 46899998754

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=103.38  Aligned_cols=116  Identities=18%  Similarity=0.191  Sum_probs=83.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      .++++||||+|++|++++++|+++| ++|++++|+++.......+........+++++.+|++|++++.++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            4789999999999999999999985 99999999874311112222222223368899999999988766654      5


Q ss_pred             cCEEEEeCccccc--------------eecchHHHHH----HHHHHHHhCCccEEEEecCCc
Q 033236           76 VDVVICTISGVHF--------------RSHNILMQLK----LVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~~--------------~~~~~~~~~~----~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +|++||++|....              ++.|+.+...    +.+.+.+.+ ..+++++||..
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~  148 (253)
T PRK07904         88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVA  148 (253)
T ss_pred             CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechh
Confidence            9999999975421              2445555544    566666666 57999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.5e-16  Score=104.38  Aligned_cols=117  Identities=14%  Similarity=0.148  Sum_probs=81.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++...+....+..+.....++..+.+|++|++++.++++       +
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG   87 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999999999873222111111111112357789999999999888765       3


Q ss_pred             cCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                      +|++|||||....              ++.|..+...+.+.+    .+.+ ..+++++||...
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  149 (265)
T PRK07062         88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLA  149 (265)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccc
Confidence            7999999985321              234555555555444    3344 468999987654

>PRK07985 oxidoreductase; Provisional

Probab=99.68  E-value=1.2e-15  Score=105.22  Aligned_cols=120  Identities=16%  Similarity=0.142  Sum_probs=86.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++..|+..................++.++.+|+++++++.++++       
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999998877542211111111111123457789999999998887765       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      ++|++||++|...               .++.|+.++..+++++.+.- .-.++|++||...+
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~  190 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY  190 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc
Confidence            3799999998421               24578889989998887641 12589998876543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.68  E-value=9e-16  Score=103.95  Aligned_cols=114  Identities=24%  Similarity=0.169  Sum_probs=84.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ...+.........+..+++|+++++++.++++       
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA-----AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999976     22222222123457889999999998888775       


Q ss_pred             ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~  120 (124)
                      ++|++|||+|...                   .++.|+.++..+++++.+.-  .-.++|+++|...
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~  145 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAG  145 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccce
Confidence            3799999998421                   23567788888888886632  1246777776543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.2e-16  Score=103.89  Aligned_cols=115  Identities=14%  Similarity=0.107  Sum_probs=82.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||.++++.|+++|++|++++|++...+.. .+.... ...++.++.+|+++++++.++++       +
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQL-VAEIRA-EGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999986321111 111111 13457889999999999888876       4


Q ss_pred             cCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      +|++||++|...               .++.|+.+...+++++.    +.+ ..+++++||...
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~  146 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVG  146 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHh
Confidence            899999998531               13456666666655543    344 468999887543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=102.97  Aligned_cols=115  Identities=22%  Similarity=0.172  Sum_probs=85.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++     ...+........++.++++|+++++++.++++       
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSA-----EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999986     22222222123467889999999998888775       


Q ss_pred             ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                      ++|++|||+|...                   .++.|+.+...+++++.+.-  .-.++|++||...+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  147 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF  147 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence            4899999998532                   13457777777777776431  12478888876544

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1e-15  Score=103.14  Aligned_cols=109  Identities=24%  Similarity=0.221  Sum_probs=85.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++..          .....++.++++|+++++++.++++.      
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999999998621          11235678999999999999888764      


Q ss_pred             -cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                       +|++|||+|...              .++.|+.++..+++++.+.    +...++|++||...
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~  138 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG  138 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence             699999998532              1346788888888887642    11358999987653

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.68  E-value=6.4e-16  Score=107.67  Aligned_cols=117  Identities=18%  Similarity=0.274  Sum_probs=92.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCc-hHHHHHh-------hhhccCCeEEEEcccCCh------HH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLD-IDKLQML-------LSFKKQGAHLIEASFADH------RS   68 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~-~~~~~~~-------~~~~~~~~~~~~~D~~~~------~~   68 (124)
                      +++++|||+||+|.+++.+|+.+- .+|+|++|.++... .++.++.       .+....+++.+.+|++++      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999998875 69999999875311 1111111       112356899999999854      68


Q ss_pred             HHHHhcccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           69 LVEAVKRVDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        69 ~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ..++.+.+|.|||+++.++       ...+|+.|+.++++.|...+ .|.++|+||..++
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeec
Confidence            8889999999999998665       35789999999999998776 7899999977653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.2e-15  Score=101.59  Aligned_cols=113  Identities=19%  Similarity=0.204  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      |+++++||||+|+||+++++.|+++|++|++++|+++    ......+.....+++.+.+|+.|++++.+++++      
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA----ALAAFADALGDARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999862    211222222345688999999999999888764      


Q ss_pred             -cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       +|++||++|....              ...|..+..++++++.+    .+ ..+++++||..
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~  138 (257)
T PRK07074         77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVN  138 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchh
Confidence             7999999985421              23567777777777743    34 46899998753

>PRK09242 tropinone reductase; Provisional

Probab=99.68  E-value=9.4e-16  Score=103.49  Aligned_cols=119  Identities=13%  Similarity=0.187  Sum_probs=86.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |.+|+++|+|++|+||+++++.|+++|++|++++|++...+....+......+.++..+.+|+++++++.++++      
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35688999999999999999999999999999999862211111111111123467889999999998877765      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                       ++|++||++|...              .+..|+.+..++++++.+    .+ ..+++++||...
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~  150 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSG  150 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECcccc
Confidence             3799999998531              134677888888777753    44 468999987654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.9e-15  Score=100.92  Aligned_cols=114  Identities=16%  Similarity=0.145  Sum_probs=84.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++|||++|++|.+++++|+++|++|++++|++...+. ..+.... ...++.++.+|+++++++.++++       +
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKA-VAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998622111 1111111 23468889999999999988876       5


Q ss_pred             cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      +|++||++|....              ++.|+.++.++.+++.+    .+ .++++++||..
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~  145 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTA  145 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchh
Confidence            8999999985421              34567777777777754    34 46888888754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=102.76  Aligned_cols=112  Identities=13%  Similarity=0.091  Sum_probs=85.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++|||++|++|.++++.|+++|++|++++|+..    . .+........++..+.+|++|++++.++++       +
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~----~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA----R-ARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH----H-HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999872    2 222111123457889999999999988876       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~  119 (124)
                      +|++||++|...              .++.|+.+..++++++.+..    ...++|++||..
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~  142 (257)
T PRK07067         81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA  142 (257)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH
Confidence            799999998532              13567888888988886532    114788888743

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.4e-15  Score=102.61  Aligned_cols=118  Identities=15%  Similarity=0.089  Sum_probs=85.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++++++|||++|+||+++++.|+++|++|++++|+++.......+.+.. ...++..+.+|++|++++.++++.     
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999998763211111122211 134578899999999998887764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        +|++|||+|...              .++.|+.+...+++++.+    .+ ..+++++||...
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~  148 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSG  148 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhh
Confidence              699999998542              134677777776666543    33 468898887543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.2e-15  Score=101.40  Aligned_cols=115  Identities=17%  Similarity=0.096  Sum_probs=84.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++++++|||++|++|+++++.|+++|++|.+. .|+.    .........+.  ...+.++.+|++|++++.++++    
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK----QAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999775 5654    11112222222  2457899999999999988876    


Q ss_pred             ---------ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           75 ---------RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---------~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                               ++|++||++|....              .+.|+.++.++++.+.+.- ...+++++||...
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~  150 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV  150 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh
Confidence                     48999999985421              2367888888888887631 1358998887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.8e-15  Score=102.03  Aligned_cols=110  Identities=19%  Similarity=0.212  Sum_probs=81.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|+++.++.    +...+..   ...++.++.+|++|++++.++++       
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA----ENEAKEL---REKGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc----HHHHHHH---HhCCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            358899999999999999999999999998887665    1222222   22357899999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHH----HHHhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDA----IREAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~  119 (124)
                      ++|++|||+|...              .++.|+.++..+.+.    +.+.+ ..++|++||..
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~  140 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNA  140 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHH
Confidence            4799999998532              134577776555444    44344 46899998754

>PRK08264 short chain dehydrogenase; Validated

Probab=99.67  E-value=1.3e-15  Score=101.57  Aligned_cols=109  Identities=19%  Similarity=0.205  Sum_probs=85.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~   78 (124)
                      +++++||||+|++|+++++.|+++|+ +|++++|++..        ... ...++.++.+|++|++++.++++.   +|+
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~--------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES--------VTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh--------hhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            46899999999999999999999998 99999998721        111 245688999999999999998874   899


Q ss_pred             EEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           79 VICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      |||++|...               ..+.|..+..++++++.+    .+ ..+++++||...+
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~  137 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSW  137 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc
Confidence            999998621               134567888888888654    34 5689998876543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.5e-15  Score=103.39  Aligned_cols=119  Identities=15%  Similarity=0.119  Sum_probs=88.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||.++++.|+++|++|++++|++........+... ....++.++.+|+++.+++.++++       
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE-KEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999876322112222221 123467889999999999888875       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh-CCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~~  121 (124)
                      ++|++||++|...               .++.|+.+..++++++.+. ....++|++||...+
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~  186 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGY  186 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccccc
Confidence            3799999998531               1356788899999988764 112589999876544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.67  E-value=2.6e-15  Score=101.39  Aligned_cols=116  Identities=17%  Similarity=0.203  Sum_probs=81.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++. . ....+.... ....+.++.+|+++++++.++++      
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-V-HEVAAELRA-AGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-H-HHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999998751 1 111111111 13457789999999988888775      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHH----HHHHHhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLV----DAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~----~~~~~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||||...               .++.|+.+...++    +.+.+.+ ..+++++||...
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~  147 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIAT  147 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccc
Confidence             4799999997421               1234555555444    4444455 568999997653

>PRK08643 acetoin reductase; Validated

Probab=99.67  E-value=2.9e-15  Score=100.99  Aligned_cols=115  Identities=18%  Similarity=0.132  Sum_probs=83.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |+++++||||+|+||.++++.|+++|++|++++|++..    ..+....+.  ..++.++++|+++++++.++++     
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEET----AQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT   76 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998622    111111221  3467889999999998888776     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                        ++|++|||+|...              .++.|..++..+++.+.+.    +...+++++||...
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  142 (256)
T PRK08643         77 FGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG  142 (256)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc
Confidence              4799999998532              1245677766666666542    21257888887643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.67  E-value=2.2e-15  Score=100.69  Aligned_cols=112  Identities=18%  Similarity=0.208  Sum_probs=83.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|++|+++++.|+++|+.|++..|++     ...+........+++++.+|+++.++++++++       
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV-----EKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999988888775     11221111123467899999999999888764       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      ++|++|||+|...              .++.|+.+..++++++.+    .+ ..++|++||..
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  141 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVV  141 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHH
Confidence            4899999998532              135677787777777653    34 56899998754

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.4e-15  Score=100.84  Aligned_cols=117  Identities=15%  Similarity=0.161  Sum_probs=83.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      ++++++|||++|+||+++++.|+++|++|++++|++...+. ..+......+.++.++.+|++|++++.++++      +
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKK-AREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            46789999999999999999999999999999998622111 1111111123468899999999999988876      3


Q ss_pred             cCEEEEeCccccc--------------eecchHHHHHHHHH----HHHhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVHF--------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~~  120 (124)
                      +|++|||+|....              ++.|..+...++++    +.+.+ ..++|++||...
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~  147 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAI  147 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccc
Confidence            8999999985321              23455554444444    44444 468999997653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.3e-15  Score=103.79  Aligned_cols=108  Identities=18%  Similarity=0.186  Sum_probs=82.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      |+++||||+|++|+++++.|+++|++|++++|++     ...+   .....++.++.+|+++++++.++++       ++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKA-----EDVE---ALAAAGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHH---HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999986     1122   1223457789999999999888764       47


Q ss_pred             CEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCcc
Q 033236           77 DVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~  120 (124)
                      |++||++|...              .++.|..+..++++++.+.   + ..+++++||...
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~  133 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSG  133 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccc
Confidence            99999998532              1346777887888877542   3 357888887553

>PRK09135 pteridine reductase; Provisional

Probab=99.66  E-value=2.5e-15  Score=100.61  Aligned_cols=115  Identities=17%  Similarity=0.133  Sum_probs=82.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +++++||||+|++|+++++.|+++|++|++++|+.....+...+.........+.++.+|++|++++.++++.       
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999987522111111112121234578999999999999988763       


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecC
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEG  117 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss  117 (124)
                      +|+|||++|...              ..+.|+.++.++++++.+.-  ...+++.+++
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~  143 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD  143 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC
Confidence            799999998421              23468899999999986521  1235555554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.2e-15  Score=102.28  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=85.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----cCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----VDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~   78 (124)
                      +|+++||||+|++|.++++.|+++|++|++++|+++..+. ..+........+++++++|+++++++.++++.    +|.
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLER-LADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-HHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            3689999999999999999999999999999998732211 11111111234788999999999999888764    699


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      +||++|...              .++.|+.+..++++++.+    .+ ..+++++||..
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  137 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVA  137 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEeccc
Confidence            999998532              134677888888777654    34 57899888754

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.9e-15  Score=100.43  Aligned_cols=111  Identities=20%  Similarity=0.174  Sum_probs=82.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|++|++++++|+++|++|++++|++    +...+..+. ...++.++++|+++.+++..+++       
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDP----ASLEAARAE-LGESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH----HHHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999875    111111111 13457789999999988776654       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh--CCccEEEEecCC
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGM  118 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~  118 (124)
                      ++|++||++|...              .++.|+.++.++++++.+.  . ..++++++|.
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~i~~~S~  138 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASIVLNGSI  138 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEech
Confidence            4799999998532              2356788899999999753  2 2466666653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.8e-15  Score=102.26  Aligned_cols=114  Identities=14%  Similarity=0.106  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|++|+++++.|+++|++|++++|+..    ...+..+..  ...++.++.+|+++++++.++++     
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVE----KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999998762    111111111  12457888999999999988876     


Q ss_pred             --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        ++|++||++|....              ++.|..++.++.+.+.+    .+ ..+++++||...
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~  149 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVA  149 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHh
Confidence              47999999985421              24677888888877653    33 467999998654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.66  E-value=3.6e-15  Score=100.23  Aligned_cols=112  Identities=13%  Similarity=0.101  Sum_probs=82.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++|||++|++|+++++.|+++|++|++++|++.    ........+  ...++.++.+|++|++++.++++      
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEA----GAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF   76 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            368999999999999999999999999999999862    111111111  23468899999999997766554      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                       ++|+|||+++....              .+.|..+...+++.+    .+.+ +++++++||..
T Consensus        77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~  139 (255)
T TIGR01963        77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAH  139 (255)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchh
Confidence             47999999985421              235677766777666    4455 67999998754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.4e-15  Score=100.55  Aligned_cols=113  Identities=12%  Similarity=0.109  Sum_probs=83.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++|+|++|++|+.+++.|+++|++|++++|++.    ...+.....  ...++.++.+|+++++++.++++      
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQD----ALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999999862    211111111  23468899999999999888876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                       ++|++||++|...              .++.|..++.++.+.+.    +.+ ..+++++||...
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~  145 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAA  145 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHh
Confidence             3899999998532              13456677666666653    344 468999987654

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.66  E-value=4.4e-15  Score=104.10  Aligned_cols=114  Identities=17%  Similarity=0.209  Sum_probs=82.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++...    .+..+.+  ...++.++.+|++|++++.++++      
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l----~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL----EALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            56899999999999999999999999999999986221    1111111  23467889999999999988865      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHHHH----HHHHHHHhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQLK----LVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~----~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||+|....              ++.|+.+..+    +++.+.+.+ ..++|++||...+
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~  148 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAY  148 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhc
Confidence             48999999985321              2345444444    555555554 4789999986543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.66  E-value=2.4e-15  Score=100.88  Aligned_cols=115  Identities=14%  Similarity=0.145  Sum_probs=84.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      |++++++||||+|++|++++++|+++|++|+++.++..+   .........  ...++.++.+|+++++++.+++++   
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE---AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999876554311   111111122  134588999999999999988875   


Q ss_pred             ----cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                          +|+|||++|....              ++.|+.++.++++++.+    .+ ..+++++||..
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  145 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSII  145 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchh
Confidence                7999999986421              34677888888888864    33 46899998754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=101.70  Aligned_cols=119  Identities=15%  Similarity=0.062  Sum_probs=79.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+++||+++++.|+++|++|+++.|+..+......+........++.++++|++|+++++++++.     
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999888765421111111111111234678999999999999888763     


Q ss_pred             --cCEEEEeCcccc---------c-----------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVH---------F-----------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~---------~-----------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                        +|++|||||...         +           ++.|..+...+.+.+    .+.+ ..++|++||...
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  155 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGN  155 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccc
Confidence              799999997421         1           123444444333333    3333 368999987653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=3.6e-15  Score=100.51  Aligned_cols=113  Identities=14%  Similarity=0.100  Sum_probs=84.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      .+++++||||+|+||+++++.|+++|++|++.+|++.    ...+....+.  ..++..+.+|++|++++.++++.    
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE----RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999862    2112222222  34577889999999999888753    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                         +|++||++|...              .++.|..+...+.+++.+    .+ ..+++++||..
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~  147 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQ  147 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccch
Confidence               799999998532              235667777777777654    33 46899998754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.65  E-value=4.3e-15  Score=100.39  Aligned_cols=115  Identities=14%  Similarity=0.225  Sum_probs=84.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||.++++.|+++|++|+++.|+. .. +...+.... ...++.++++|+++++++.++++       
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NW-DETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HH-HHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999998873 11 111122211 23468899999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++||++|...              .++.|+.+...+.+++.    +.+ ..+++++||...
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  153 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLS  153 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHh
Confidence            4799999998532              12456677666665554    344 468999987653

>PRK08589 short chain dehydrogenase; Validated

Probab=99.65  E-value=1.9e-15  Score=103.01  Aligned_cols=117  Identities=9%  Similarity=0.078  Sum_probs=83.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++ ..+ ...+.... ...++..+.+|+++++++.++++.      
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~-~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE-AVS-ETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH-HHH-HHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999973 211 11122211 234588999999999988887763      


Q ss_pred             -cCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           76 -VDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                       +|++|||+|....               ++.|..+...+++++.+.-  .-.++|++||...+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ  145 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc
Confidence             7999999985421               1345666666666655431  02589999876543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=4.7e-15  Score=99.62  Aligned_cols=112  Identities=17%  Similarity=0.147  Sum_probs=82.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +++++||||+|+||+++++.|+++|++|++..++..    ...+........++.++.+|+++++++.+++++       
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE----DAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999988765441    222222111224688999999999999888763       


Q ss_pred             -cCEEEEeCcccc--------------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVH--------------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       +|++||++|...                    .++.|+.+..++++++.+    .+ ..+++++||..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  148 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNL  148 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcc
Confidence             899999997420                    145678888888888864    33 46899988653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=2.4e-15  Score=100.53  Aligned_cols=114  Identities=13%  Similarity=0.142  Sum_probs=84.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      +++++++|+||+|++|.++++.|+++|++|+++ .|++..    .......+  ...++.++.+|+++++++.++++   
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEA----AQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999988 887521    11111111  23458899999999999988876   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                          ++|+|||++|...              .++.|..+..++++.+.+    .+ .++++++||..
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~  144 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIW  144 (247)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHh
Confidence                6899999998642              124567777777777754    33 46799888754

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.4e-15  Score=100.22  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=85.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|+++..  ...+.... ...++.++.+|+++++++.++++      
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3568999999999999999999999999999999887322  11111111 23468899999999999988876      


Q ss_pred             -ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHH---hCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH-------------FRSHNILMQLKLVDAIRE---AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~  119 (124)
                       ++|++||++|...             ..+.|+.+..++.+.+.+   .+ ..+++++||..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~  142 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKT  142 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHH
Confidence             4799999998431             134567777777777654   22 35899998754

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.65  E-value=1e-15  Score=104.71  Aligned_cols=92  Identities=21%  Similarity=0.306  Sum_probs=78.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc--CEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV--DVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~   82 (124)
                      +++|+||+|++|++++++|+++|++|++++|+                       .+|+.+++++.+++++.  |+|||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999999998874                       47999999999999865  999999


Q ss_pred             Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++...          .++.|+.++.++++++.+.+ . ++|++||...|
T Consensus        58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy  104 (287)
T TIGR01214        58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVF  104 (287)
T ss_pred             CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeee
Confidence            98542          23467889999999998887 4 89999986544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=4.7e-15  Score=99.98  Aligned_cols=113  Identities=15%  Similarity=0.210  Sum_probs=84.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++.    ........+  ...++.++.+|+++++++.+++++    
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAA----TLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999862    211111111  234588999999999999888763    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                         +|++||++|...              .++.|..+..++++.+.+    .+ ..+++++||..
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~  149 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIA  149 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeech
Confidence               699999998532              134567777777766644    45 57899988754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.9e-15  Score=100.94  Aligned_cols=114  Identities=14%  Similarity=0.193  Sum_probs=84.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++|||++|+||.++++.|+++|++|++++|+...    ..+..+.+  ...++..+.+|++|++++.++++     
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA----LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998622    11111221  13457889999999999888775     


Q ss_pred             --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                        ++|++|||+|....              ++.|+.+...+.+++.+.    +...+++++||..
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  148 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMS  148 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHH
Confidence              58999999985421              246778888888777543    2124688887643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.65  E-value=3.7e-15  Score=100.64  Aligned_cols=117  Identities=13%  Similarity=0.048  Sum_probs=83.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |+++++||||+|+||.++++.|+++|++|++++|+....+... +..... ...++.++.+|+++++++.++++      
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999863221111 111111 12458899999999998888765      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       ++|++||++|...              .++.|+.++.++++++.+    .+.-.+++++||..
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~  143 (259)
T PRK12384         80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS  143 (259)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc
Confidence             3799999998432              135677887777776654    33124888887643

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.4e-15  Score=100.83  Aligned_cols=107  Identities=20%  Similarity=0.250  Sum_probs=81.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+++.           ....++.++.+|++|++++.++++       
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----------DLPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh-----------hcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999999998621           013457899999999998887654       


Q ss_pred             ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++||++|...                .++.|..+..++.+.+.    +.+ ..++|++||...
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~  141 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQR  141 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccc
Confidence            4799999998421                13457777766655554    344 468999887654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.65  E-value=4.6e-15  Score=101.22  Aligned_cols=115  Identities=21%  Similarity=0.228  Sum_probs=82.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      .+++++||||+|++|+++++.|+++|++|++++|+..    ...+..+.+.  ..++.++++|+++++++.++++     
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQE----KAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999862    2222222222  2457889999999998888765     


Q ss_pred             --ccCEEEEeCcccc-----------------------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH-----------------------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                        ++|++|||+|...                             .++.|+.+...+++.+    .+.+ ..++|++||..
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~  163 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN  163 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence              4899999998421                             1234666666555444    3344 46899998765


Q ss_pred             cc
Q 033236          120 PF  121 (124)
Q Consensus       120 ~~  121 (124)
                      .+
T Consensus       164 ~~  165 (278)
T PRK08277        164 AF  165 (278)
T ss_pred             hc
Confidence            44

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.65  E-value=5e-15  Score=99.00  Aligned_cols=114  Identities=17%  Similarity=0.158  Sum_probs=83.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      +++++|||++|++|+++++.|+++|++|++++|++.   +...+.....  ...++.++.+|+++++++.++++.     
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN---DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999862   1111111111  234588999999999998887753     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                        +|++||++|...              .++.|+.+..++.+++    .+.+ ..++|++||...
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~  142 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNG  142 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhh
Confidence              899999998542              1246677777765444    4455 579999987654

>PRK12743 oxidoreductase; Provisional

Probab=99.64  E-value=3.9e-15  Score=100.54  Aligned_cols=117  Identities=11%  Similarity=0.039  Sum_probs=84.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+++++||||+|+||.++++.|+++|++|+++.+++........+.... ...++.++.+|+++++++.++++       
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999988876542111111111111 23468899999999999888776       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~  119 (124)
                      ++|++||++|...              .+..|+.+...+++++.+..    .-.++|++||..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~  142 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH  142 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc
Confidence            3799999998542              13467788888888776532    124899988754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.4e-15  Score=101.50  Aligned_cols=112  Identities=14%  Similarity=0.138  Sum_probs=82.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+++||||+|+||+++++.|+++|++|++++|+...    ..+....+  ...++.++.+|+++++++.++++       
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG----GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999988622    11111111  23467889999999998888775       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHH----HHHhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~~  120 (124)
                      ++|++||++|....              ++.|+.+..++.+.    +.+.+ ..+++++||...
T Consensus        77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~  139 (270)
T PRK05650         77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAG  139 (270)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhh
Confidence            58999999986421              23566666665555    44555 579999987654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.64  E-value=7.5e-15  Score=98.39  Aligned_cols=115  Identities=18%  Similarity=0.178  Sum_probs=81.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |+++.++|||++|++|+++++.|+++|++|++..+...   ....+..+...  ...+..+.+|++|.+++.++++    
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            67889999999999999999999999999888654331   11222222222  3356788999999998888765    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                         ++|++|||+|...              ..+.|..+...+.+.+    .+.+ ..+++++||..
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~  142 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVN  142 (246)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechh
Confidence               4899999998542              1245666766655554    3444 56899998754

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.6e-15  Score=102.83  Aligned_cols=116  Identities=16%  Similarity=0.162  Sum_probs=85.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      .+++++||||+|+||.++++.|+++|++|++++|++    ....+....+. ...+..+.+|++|++++.++++      
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE----AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999986    22122222222 2345667799999999888765      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                       ++|++|||+|...              .++.|+.++.++++++.+.-  ...+++++||...+
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~  147 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAF  147 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhc
Confidence             4899999998642              13467888888888876531  13589998876543

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.9e-15  Score=98.72  Aligned_cols=117  Identities=14%  Similarity=0.110  Sum_probs=85.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++|||++|++|+++++.|+++|++++++.|+..+......+.... ...++.++.+|+++++++.++++       
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999988877652211111122211 23568899999999999988887       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      ++|++||++|....              ++.|+.+..++++++.+.. ...+++++||..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            48999999985421              3467788888888887642 124888888654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.7e-15  Score=99.58  Aligned_cols=114  Identities=16%  Similarity=0.171  Sum_probs=84.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++. . ....+.... ...++.++.+|+++++++.++++       
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-I-EKLADELCG-RGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-H-HHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999999999999999999998751 1 111111111 23457789999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      ++|++||++|...              .++.|+.+..++++++.+    .+ ..+++++||..
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~  143 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVT  143 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHH
Confidence            4799999998532              134677888888887654    33 46888888644

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.64  E-value=7.1e-15  Score=99.72  Aligned_cols=114  Identities=16%  Similarity=0.117  Sum_probs=84.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      |++++++|||++|++|.+++++|+++|++|+++.|+++..    .+....+.  ..++.++++|+++++++.++++.   
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV----DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999998876221    11122221  33588999999999999988763   


Q ss_pred             ----cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                          +|++|||+|....              ++.|..+...+.+.+.+    .+ ..+++++||..
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~  148 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMM  148 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCcc
Confidence                8999999986421              23566777666666543    44 56899988754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.5e-15  Score=97.96  Aligned_cols=105  Identities=18%  Similarity=0.159  Sum_probs=81.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++|+||+|++|+++++.|+++|++|++++|++..             ....+++.+|+++++++.++++      
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-------------DFPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-------------ccCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            677899999999999999999999999999999998721             0112578999999999888876      


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                      ++|++||++|....              ++.|+.+..++.+++.    +.+ ..+++++||..
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  129 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA  129 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc
Confidence            47999999985421              2355666666655553    455 57899998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.64  E-value=5.9e-15  Score=100.05  Aligned_cols=109  Identities=15%  Similarity=0.092  Sum_probs=84.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++|||++|+||.++++.|+++|++|++++|++...           ...++..+.+|++|++++.++++      
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999999999999999999887221           12467889999999999988776      


Q ss_pred             -ccCEEEEeCcccc-----------------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH-----------------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~-----------------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                       ++|++||++|...                       .++.|+.++..+++++.+.-   ...++|++||...
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG  148 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc
Confidence             3799999998431                       13467777888887776531   1357999887654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.64  E-value=1.1e-14  Score=98.21  Aligned_cols=115  Identities=11%  Similarity=0.122  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++|||++|+||.+++++|+++|++|++++++..   ....+.... ....+..+++|++|++++.++++       
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4688999999999999999999999999988876541   122222222 13457889999999999998876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|..+..++++++.+.    +.-.+++++||...
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~  148 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS  148 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh
Confidence            3899999998532              1357888888888877543    21247888887643

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.9e-15  Score=99.34  Aligned_cols=120  Identities=14%  Similarity=0.056  Sum_probs=83.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||.++++.|++.|++|++..++.............. .......+.+|+++.+++..+++      
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            34689999999999999999999999999988754331111111111111 23456788999999877665442      


Q ss_pred             -------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 -------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                             ++|++|||||...              .++.|+.++..+++++.+.- ...++|++||...+
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR  149 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence                   5899999998431              12467888888888887642 12589999977643

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.3e-15  Score=99.83  Aligned_cols=114  Identities=16%  Similarity=0.175  Sum_probs=85.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+|++|.++++.|+++|++|++++|++..    ..+....+ ...++.++.+|++|++++.++++      
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999998621    11111111 23468899999999999888765      


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      .+|++||++|....              ++.|+.++.++++.+.+    .+ ..+++++||...
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~  142 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFG  142 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhh
Confidence            37999999986421              34678888888888754    22 357888876543

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.1e-15  Score=99.27  Aligned_cols=115  Identities=15%  Similarity=0.102  Sum_probs=82.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +++++|+||+|++|.++++.|+++|++|++++|++...... .+.... ...++..+.+|+++++++.+++++       
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEET-VALIRE-AGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999987321111 111111 234688999999999999888764       


Q ss_pred             cCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      +|++||++|...               .++.|+.+...+++++.    +.+ ..+++++||...
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~  147 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAG  147 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhh
Confidence            699999998531               12356666666555443    344 468888887653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.64  E-value=7e-15  Score=98.48  Aligned_cols=109  Identities=15%  Similarity=0.131  Sum_probs=80.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---------   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------   74 (124)
                      |+++||||+|+||++++++|+++|++|++++|+...    ..   ......++.++.+|+++++++.++++         
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----SL---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----hh---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            589999999999999999999999999999998621    11   11123468899999999998888542         


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||+|...               .++.|+.+...+.+.+.+    .+ ..+++++||...
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~  140 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAA  140 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhh
Confidence              3789999998532               245677776666555543    33 468999987653

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.63  E-value=3.1e-15  Score=100.08  Aligned_cols=112  Identities=17%  Similarity=0.153  Sum_probs=84.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      ++++++|+|++|++|+++++.|+++|++|++++|++     ...+....  ..+..++.+|+++++++.++++   ++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA-----AALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            457899999999999999999999999999999986     22221111  1245688999999999999886   3899


Q ss_pred             EEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           79 VICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        79 vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      +||++|....              ...|+.+..++++++.+.    +...+++++||...
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  140 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA  140 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH
Confidence            9999985421              236778888888888653    11258999987653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.6e-15  Score=102.78  Aligned_cols=113  Identities=13%  Similarity=0.105  Sum_probs=83.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++...    .+..+..  ....+.++.+|++|++++.++++      
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l----~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEAL----QAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999986221    1111111  13457788999999999998874      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||+|...              .++.|+.++.++.+++.    +.+ ..++|++||...
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~  146 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGG  146 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhh
Confidence             4899999998432              13567777777766664    334 468888887653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.63  E-value=5.9e-16  Score=107.03  Aligned_cols=102  Identities=18%  Similarity=0.275  Sum_probs=72.1

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HH-HHHHhc-----cc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RS-LVEAVK-----RV   76 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~~-----~~   76 (124)
                      ++||||+|++|+++++.|+++|++++++.|+.....    . .       ..+..+|+.|.   ++ +.++++     ++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~----~-~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT----K-F-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch----H-H-------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            799999999999999999999997777666542210    0 0       01223444443   33 333432     68


Q ss_pred             CEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           77 DVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|||+|+...        ..+.|+.++.+++++|.+.+ + ++|++||...|
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vy  120 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATY  120 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHh
Confidence            99999997321        24568899999999999988 5 69999987655

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=4.5e-15  Score=102.92  Aligned_cols=117  Identities=16%  Similarity=0.149  Sum_probs=89.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      .+++++|||++++||..+++.|+.+|.+|+...|+....++...+.........+.++++|+++.+++.++.+.      
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999743333333333333456788999999999999988653      


Q ss_pred             -cCEEEEeCcccc------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVH------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                       .|++|||||...            .+++|+.|...+.+.+.    ++. ..|+|++||..
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~  173 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSIL  173 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCcc
Confidence             799999999542            24578877766666554    343 36999999854

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=8e-15  Score=98.45  Aligned_cols=118  Identities=13%  Similarity=0.027  Sum_probs=83.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|++|++++++|+++|+++++..|+.............. ...++..+.+|+++++++.++++       +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999988776542111111111111 12356788999999998888776       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      +|+|||++|...              ..+.|+.+..++++++.+.- ...+++++||...+
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  145 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI  145 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc
Confidence            799999998421              13456777888888887642 12479999886654

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.63  E-value=8.5e-15  Score=98.77  Aligned_cols=111  Identities=13%  Similarity=0.093  Sum_probs=80.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||.+++++|+++|++|++++|++.    ......+..   ...++.+|+++++++.++++      
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE----AGKAAADEV---GGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHc---CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999861    111111111   22578999999999988876      


Q ss_pred             -ccCEEEEeCccccc----------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVHF----------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~~----------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                       ++|++||++|....                ++.|..++..+++.+.    +.+ ..+++++||..
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~  142 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFV  142 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchh
Confidence             47999999985321                2345666666666554    344 45788887643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.63  E-value=6.1e-15  Score=98.93  Aligned_cols=116  Identities=14%  Similarity=0.119  Sum_probs=79.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|++|..+++.|+++|++|++..+++.+........... ...++.++.+|+++++++.++++       +
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999987654431111111111111 23468899999999998887765       4


Q ss_pred             cCEEEEeCccccc---------------eecchHHHHHHHHHHHHhCCc------cEEEEecCCc
Q 033236           76 VDVVICTISGVHF---------------RSHNILMQLKLVDAIREAGNV------KKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~~~------~~~i~~ss~~  119 (124)
                      +|++||++|....               .+.|..+...+++.+.+....      .++|++||..
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~  145 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIA  145 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence            8999999985321               346677777777655442101      3588888653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.8e-15  Score=100.64  Aligned_cols=113  Identities=18%  Similarity=0.128  Sum_probs=84.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      +++++||||+|+||.++++.|++.|++|++++|++..    ..+....+  ...++.++.+|+++++++.+++++     
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK----VDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998622    11111111  124567899999999999888764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMI  119 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~  119 (124)
                        +|++||++|...              .++.|+.++.++++++.+.-  .-.+++++||..
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~  146 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ  146 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence              699999997421              13478888888888876531  125888888754

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.63  E-value=1.5e-15  Score=104.64  Aligned_cols=92  Identities=25%  Similarity=0.334  Sum_probs=76.7

Q ss_pred             EEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEEeCc
Q 033236            7 LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVICTIS   84 (124)
Q Consensus         7 li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~   84 (124)
                      +||||+|+||+++++.|++.|++|++..+..                      .+|+.+.+++.++++.  +|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKEKPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhccCCCEEEEeee
Confidence            5899999999999999999998877654321                      4899999999998874  799999997


Q ss_pred             ccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           85 GVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        85 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ...           +.+.|..++.+++++|.+.+ ++++|+.||...|
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vy  105 (306)
T PLN02725         59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIY  105 (306)
T ss_pred             eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeec
Confidence            432           23568899999999999998 8999999987655

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.63  E-value=4.5e-15  Score=94.10  Aligned_cols=115  Identities=17%  Similarity=0.236  Sum_probs=86.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |+++||||++++|+.+++.|+++| +.|+++.|++  ..+...+....+  ...++.++++|++++++++++++.     
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~--~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSE--DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC--HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc--ccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 6788888881  011222222222  246788999999999999888763     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                        +|++|||+|...              .++.|+.+...+.+++.+.+ -.+++++||....
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~  139 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGV  139 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGT
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhc
Confidence              899999998653              23567788888888888855 5789988876543

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.2e-14  Score=97.80  Aligned_cols=114  Identities=17%  Similarity=0.097  Sum_probs=83.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|+||.++++.|+++|++|++++|+...    .....+.+.  ...+..+++|+++.+++.++++    
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG----CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999997621    111222221  2357789999999998887765    


Q ss_pred             ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                         ++|++||++|...               .++.|+.+...+++++.    +.+ ..+++++||..
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  147 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVN  147 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchh
Confidence               3799999998431               13456777777776664    333 46888888754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.62  E-value=1.1e-14  Score=97.87  Aligned_cols=106  Identities=14%  Similarity=0.101  Sum_probs=83.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++++++|||++|++|+++++.|+++|++|++++|++          . .....++.++++|+++++++.+++++      
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----------~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----------L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----------h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999875          0 11245688999999999999998764      


Q ss_pred             -cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       +|++|||+|....              ++.|..+...+++++.+    .+ ..+++++||..
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~  137 (252)
T PRK08220         76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNA  137 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCch
Confidence             7999999985421              34567777778877754    33 46899888754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.62  E-value=1.5e-14  Score=97.58  Aligned_cols=117  Identities=13%  Similarity=0.122  Sum_probs=85.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||.++++.|+++|+++++++|+....+. ....... ...++.++.+|+++.+++.++++      
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-VVDEIQQ-LGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999887622111 1111111 13457788999999999888765      


Q ss_pred             -ccCEEEEeCccccc-------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVHF-------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                       ++|++||++|....             ++.|+.+..++++.+.+    .+ ..+++++||...
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~  149 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAA  149 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccc
Confidence             37999999985321             35678888888888764    33 358998887553

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=1.8e-14  Score=97.22  Aligned_cols=114  Identities=15%  Similarity=0.104  Sum_probs=83.3

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+  ++||+++++.|+++|++|++.+|+.     ...+.........+.++++|++|+++++++++    
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-----RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-----HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            346789999998  7999999999999999999998874     11122222233467889999999999888765    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                  .++.|..+...+.+++.+.- .-.+++++||..
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~  146 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG  146 (252)
T ss_pred             HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence               3899999998532                  12456777777777776532 124788887654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=8.9e-15  Score=101.38  Aligned_cols=118  Identities=12%  Similarity=0.024  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      ++++++||||+|+||+++++.|+++|++|++.+++.....+...+.+.. ...++.++.+|++|++++.++++      +
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4688999999999999999999999999999887642211111222211 23467899999999998888875      4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----------CccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----------NVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~ss~~~  120 (124)
                      +|++|||||...              .++.|+.++.++++++.+.-          .-.+++++||...
T Consensus        90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            899999998542              13467788888888764321          0147888887543

>PRK05855 short chain dehydrogenase; Validated

Probab=99.62  E-value=6.2e-15  Score=109.08  Aligned_cols=116  Identities=14%  Similarity=0.056  Sum_probs=87.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      .+++++|+||+|+||+++++.|+++|++|++++|+.+..    .+....+  ...++.++.+|++|++++.++++.    
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAA----ERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999986221    1111111  134678999999999999888764    


Q ss_pred             ---cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                         +|++|||||....              ++.|+.+..++++++.+.    +...++|++||...+
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  456 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY  456 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence               7999999986421              347888888888776542    212589999987654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.1e-14  Score=97.11  Aligned_cols=115  Identities=15%  Similarity=0.149  Sum_probs=84.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|++|.++++.|+++|++|++++|++...+. ..+.... ...++.++.+|++|++++.++++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~-~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLAS-LAQELAD-HGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999998622111 1111111 23467889999999999888876       4


Q ss_pred             cCEEEEeCccccc---------------eecchHHHHHHHHHHHH---hCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVHF---------------RSHNILMQLKLVDAIRE---AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~~  120 (124)
                      +|+||||+|....               .+.|..++.++++.+.+   .+ ..+++++||...
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~  140 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAG  140 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccc
Confidence            7999999985321               34577888888888754   23 367888876543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.8e-14  Score=96.50  Aligned_cols=110  Identities=16%  Similarity=0.205  Sum_probs=84.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----cCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----VDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~v   79 (124)
                      ++++||||+|++|+++++.|+++|++|++++|++     ...+.... ...++.++.+|++|++++.+++++    .|.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~-----~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ-----SVLDELHT-QSANIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHH-hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            6799999999999999999999999999999986     22222211 124578999999999999999875    5889


Q ss_pred             EEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           80 ICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      +|++|...              .++.|..++.++++++.+.- ...+++++||..
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~  130 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA  130 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh
Confidence            99997431              24567888999999987631 135788777653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.62  E-value=3.8e-15  Score=102.97  Aligned_cols=105  Identities=21%  Similarity=0.308  Sum_probs=80.3

Q ss_pred             EEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEEE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVVI   80 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi   80 (124)
                      ++||||+|++|+++++.|.++|+ +|++++|..+..   .   ...   .....+..|+.+++.++.+.+    ++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~---~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---K---FLN---LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---h---hhh---hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            58999999999999999999997 788887765211   0   111   111356788888888888765    799999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+....        .+.|+.++.++++++.+.+ + ++|++||...|
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy  118 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATY  118 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhc
Confidence            99985422        3467899999999999988 5 79999987655

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1.9e-14  Score=97.08  Aligned_cols=120  Identities=12%  Similarity=0.055  Sum_probs=85.9

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCC-------chHHHHHhhhh--ccCCeEEEEcccCChHHH
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGL-------DIDKLQMLLSF--KKQGAHLIEASFADHRSL   69 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~   69 (124)
                      |++++++||||+|  ++|.++++.|+++|++|++++|++.+.       ...........  ...+++++.+|+++++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3567899999995  899999999999999999999873211       11111111111  134588999999999988


Q ss_pred             HHHhcc-------cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           70 VEAVKR-------VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        70 ~~~~~~-------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                      .++++.       +|+|||++|...              .++.|+.++..+++++.+..   ...+++++||...
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~  157 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS  157 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence            887653       799999998531              13477888888888886531   1358999997654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.62  E-value=8.8e-15  Score=98.20  Aligned_cols=116  Identities=13%  Similarity=0.105  Sum_probs=81.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      +++||||+|++|+++++.|+++|++|++++|++.+..+...+...... ...+..+++|++|++++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            389999999999999999999999999999984221111111111111 1234568899999999888775       37


Q ss_pred             CEEEEeCccccc--------------eecchH----HHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           77 DVVICTISGVHF--------------RSHNIL----MQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |++||++|....              ++.|..    .+..+++.+.+.+ .++++++||...+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~  142 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAF  142 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhc
Confidence            999999985421              224444    5666777777666 6799999976543

>PRK12742 oxidoreductase; Provisional

Probab=99.61  E-value=2e-14  Score=95.77  Aligned_cols=112  Identities=19%  Similarity=0.239  Sum_probs=81.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~   78 (124)
                      ++++++||||+|+||+++++.|+++|++|+++.++.    ....+.+..  ..++.++.+|++|++++.++++.   +|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS----KDAAERLAQ--ETGATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC----HHHHHHHHH--HhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            468899999999999999999999999998876643    122222111  22467889999999988887753   899


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHHHh-CCccEEEEecCCc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~  119 (124)
                      +||++|...              .++.|+.+...+++.+.+. ....+++++||..
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            999998532              1345677777777666654 1135888888654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.7e-14  Score=97.11  Aligned_cols=116  Identities=13%  Similarity=0.134  Sum_probs=85.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++|||++|++|+++++.|++.|++|++++|++...+.. .+.... ...++.++++|+++++++.++++       +
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEA-KLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999986221111 111111 13468899999999999988775       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      +|++||++|...              .++.|..+..++++++.+.    +...+++++||...
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~  141 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA  141 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh
Confidence            799999997421              2456788888888888542    21358888887653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.7e-14  Score=97.39  Aligned_cols=116  Identities=11%  Similarity=0.086  Sum_probs=84.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH--HH-HHhhhh--ccCCeEEEEcccCChHHHHHHhc---
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID--KL-QMLLSF--KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~--~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      +++++||||+|++|.++++.|+++|++|++++|+.......  .. +.....  ...++.++.+|+++++++.++++   
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999986321110  01 111111  23467889999999999988876   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCC
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGM  118 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~  118 (124)
                          ++|++||++|...              .++.|+.++.++++++.+.   ..-.+++++||.
T Consensus        86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~  150 (273)
T PRK08278         86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP  150 (273)
T ss_pred             HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence                4899999998532              1346788888888888643   112478877754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2e-14  Score=96.89  Aligned_cols=98  Identities=18%  Similarity=0.233  Sum_probs=76.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++..    .....   .......+.+|++|.+++.+.+.++|++|
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~iDilV   84 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN----NSESN---DESPNEWIKWECGKEESLDKQLASLDVLI   84 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh----hhhhh---ccCCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence            346889999999999999999999999999999987611    11111   11122578999999999999999999999


Q ss_pred             EeCcccc-----------ceecchHHHHHHHHHHHH
Q 033236           81 CTISGVH-----------FRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        81 ~~a~~~~-----------~~~~~~~~~~~~~~~~~~  105 (124)
                      ||||...           .++.|+.++.++++++.+
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  120 (245)
T PRK12367         85 LNHGINPGGRQDPENINKALEINALSSWRLLELFED  120 (245)
T ss_pred             ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9998531           246788888888888765

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.3e-14  Score=98.06  Aligned_cols=115  Identities=18%  Similarity=0.105  Sum_probs=82.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +|+++||||+|++|+++++.|++.|++|+++.+...+......+... ....++.++.+|++|++++.+++++       
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIR-ALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999998877654211111111111 1234688899999999999888763       


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCC
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGM  118 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~  118 (124)
                      +|++|||+|...              .++.|+.++.++++++.+..   .-.+++++++.
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~  147 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQ  147 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECch
Confidence            799999998532              23568888888888877642   12477777654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.7e-14  Score=96.94  Aligned_cols=112  Identities=15%  Similarity=0.137  Sum_probs=79.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV-------   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------   76 (124)
                      |+++||||+|++|++++++|+++|++|++++|++.    ............+++++.+|+++++++.++++.+       
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN----KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch----HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            68999999999999999999999999999998762    2222222212356889999999999999888642       


Q ss_pred             --C--EEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           77 --D--VVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        77 --d--~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                        +  ++|+++|...               .++.|..+...+++.+.+    .+...+++++||..
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGA  143 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchh
Confidence              1  7888887531               134466665555555443    22135889888754

>PRK08017 oxidoreductase; Provisional

Probab=99.61  E-value=1.2e-14  Score=97.95  Aligned_cols=108  Identities=17%  Similarity=0.135  Sum_probs=79.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      .++++||||+|++|+++++.|+++|++|++++|++     .+.+..   ...+++.+.+|++|++++.++++.       
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~-----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKP-----DDVARM---NSLGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHhHHH---HhCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999986     222222   223578899999999887776543       


Q ss_pred             -cCEEEEeCcccc--------------ceecchHHHHHH----HHHHHHhCCccEEEEecCCc
Q 033236           76 -VDVVICTISGVH--------------FRSHNILMQLKL----VDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~i~~ss~~  119 (124)
                       +|.++|++|...              ..+.|+.++.++    ++.+.+.+ .++++++||..
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~  135 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVM  135 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcc
Confidence             589999998432              124455665554    55555566 67899998754

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.5e-14  Score=97.04  Aligned_cols=117  Identities=11%  Similarity=0.067  Sum_probs=81.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+++++|||++|+||.+++++|+++|+.|++..+++.+........... ...++.++.+|++|++++.++++       
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999998877765441111111111111 13457789999999999998876       


Q ss_pred             ccCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC------CccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG------NVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~  119 (124)
                      ++|++||++|....               ++.|+.++.++++++.+.-      .-.+++++||..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~  145 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMA  145 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchh
Confidence            47999999985421               3467788888887776541      013688888754

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.3e-14  Score=96.61  Aligned_cols=116  Identities=13%  Similarity=0.138  Sum_probs=84.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++|+||+|++|+++++.|+++|++|+++.|++.    ...+....+  ...++..+.+|+++++++.++++    
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE----RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999862    211111111  13467899999999999988876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----C-------CccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----G-------NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~-------~~~~~i~~ss~~~  120 (124)
                         ++|++||++|...              .++.|+.+..++.+.+.+.    .       ...+++++||...
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  156 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG  156 (258)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc
Confidence               4899999998432              1345677777777766532    1       0248888887643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.61  E-value=1.2e-14  Score=97.24  Aligned_cols=114  Identities=14%  Similarity=0.094  Sum_probs=79.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      ++++||||+|++|+++++.|+++|++|+++ .|+++. ..+....... ....+.++.+|++|++++.+++++       
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA-AQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999875 454411 1111111111 133578899999999999988764       


Q ss_pred             cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC------CccEEEEecCCc
Q 033236           76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG------NVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~  119 (124)
                      +|++||++|...               ..+.|+.++..+++.+.+..      ...+++++||..
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~  144 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAA  144 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence            689999998531               23456777766666665431      124689988754

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.7e-14  Score=95.74  Aligned_cols=113  Identities=18%  Similarity=0.175  Sum_probs=80.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++|||++|+||.++++.|+++|++|+++.+++........+..+.+.  +.++.++++|+++++++.++++      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            57899999999999999999999999977776654322222222222221  3467889999999999988875      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEe
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLN  115 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~  115 (124)
                       ++|++||++|...              .++.|..++..+++++.+.- ...+++++
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~  144 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTL  144 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEE
Confidence             4899999998531              13468888888888887541 11355544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.60  E-value=3e-15  Score=102.93  Aligned_cols=93  Identities=20%  Similarity=0.324  Sum_probs=74.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++|+|++|++|+++.+.|.+.|++++...|.                       ..|+.|.+.+.+.++.  +|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence            789999999999999999999999999988664                       6899999999999875  899999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+..+          .+..|+.++.++++.|.+.+  .++||+||..+|
T Consensus        58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VF  105 (286)
T PF04321_consen   58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVF  105 (286)
T ss_dssp             ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS
T ss_pred             cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEE
Confidence            998643          24678999999999999998  489999987654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.4e-14  Score=99.50  Aligned_cols=118  Identities=14%  Similarity=0.036  Sum_probs=83.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC-----CCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI-----GLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      ++++++||||+++||.++++.|++.|++|++.+|+.+     +......+....+  ...++.++.+|++|++++.++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999887641     0001111112222  13457789999999998888765


Q ss_pred             -------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CC-----ccEEEEecCCc
Q 033236           75 -------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GN-----VKKRKLNEGMI  119 (124)
Q Consensus        75 -------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~-----~~~~i~~ss~~  119 (124)
                             ++|++|||||...              .++.|+.+...+.+++.+.    +.     -.++|++||..
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~  159 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA  159 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchh
Confidence                   3799999998542              1356788887777776532    10     14789888754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.60  E-value=3.3e-14  Score=96.22  Aligned_cols=119  Identities=13%  Similarity=0.060  Sum_probs=81.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++++++||||+|+||.++++.|+++|++|++..|+..+......+.+.. ...++.++.+|++|++++.++++      
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999988888652111111111211 13457789999999999888775      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~~  120 (124)
                       ++|++||++|...              .++.|+.+...+.+    .+.+.+.-.+++++||...
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~  148 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHE  148 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence             3799999998531              13456655554444    4444432358888887543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.60  E-value=2e-14  Score=102.80  Aligned_cols=99  Identities=16%  Similarity=0.196  Sum_probs=78.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++|+++||||+|++|+++++.|+++|++|++++|++.    ........ ...++..+.+|++|++++.+.+.++|++||
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~----~l~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD----KITLEING-EDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHhh-cCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            4688999999999999999999999999999998762    11111111 123467889999999999999999999999


Q ss_pred             eCccc-----------cceecchHHHHHHHHHHHH
Q 033236           82 TISGV-----------HFRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        82 ~a~~~-----------~~~~~~~~~~~~~~~~~~~  105 (124)
                      |+|..           ..++.|..++.++++++.+
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99853           2346788999888888764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.59  E-value=3.5e-14  Score=98.74  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=84.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |+++++||||+++||.++++.|+++| ++|++.+|+...    ..+....+  ....+.++.+|+++.++++++++    
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   77 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK----AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE   77 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH----HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57889999999999999999999999 999999998621    11112222  23457789999999998888764    


Q ss_pred             ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hC-CccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~-~~~~~i~~ss~~~  120 (124)
                         ++|++|||||...               .++.|..+...+++.+.+    .+ ...++|++||...
T Consensus        78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~  146 (314)
T TIGR01289        78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG  146 (314)
T ss_pred             hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc
Confidence               3899999998531               135677777777666544    21 0258999997653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.59  E-value=1.4e-14  Score=100.13  Aligned_cols=88  Identities=24%  Similarity=0.273  Sum_probs=67.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   80 (124)
                      .|+++||||+|++|+++++.|+++|++|+...+                          |+.+.+.+...++  ++|+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEE
Confidence            478999999999999999999999999865322                          2334444555554  689999


Q ss_pred             EeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           81 CTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        81 ~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |+|+...             ++..|+.++.+++++|.+.+ +++++++|+
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~  111 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATG  111 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecc
Confidence            9998642             13468999999999999998 776666553

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=2.9e-14  Score=96.81  Aligned_cols=117  Identities=16%  Similarity=0.166  Sum_probs=87.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .++.++||||++++|+.++.+++++|..+.+.+.+.++-.+.. +.....  ..+....||+++++++.+..+       
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv-~~~~~~--g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETV-KEIRKI--GEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHH-HHHHhc--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3678999999999999999999999999999998885543332 222221  368899999999998887765       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~~  122 (124)
                      ++|++|||||...              .+++|+.+...++++.    .+.+ -.|+|-++|...++
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~  178 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF  178 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc
Confidence            3899999999652              2466766665555554    4444 47999998876543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.7e-14  Score=108.65  Aligned_cols=116  Identities=17%  Similarity=0.186  Sum_probs=86.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|++|+++++.|+++|++|++++|++...    .+.....  ...++.++.+|++|++++.++++    
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL----DELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999986221    1111111  23468899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||+|...                .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  513 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQ  513 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc
Confidence               4899999998531                12356777776666654    344 5789999986544

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.59  E-value=3.9e-14  Score=94.50  Aligned_cols=111  Identities=19%  Similarity=0.228  Sum_probs=80.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++..    ..+..   ...++.++.+|++|++++.++++.      
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP----AIDGL---RQAGAQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh----HHHHH---HHcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            45789999999999999999999999999999998632    11222   123467899999999988887653      


Q ss_pred             -cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----C-CccEEEEecCCc
Q 033236           76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----G-NVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~-~~~~~i~~ss~~  119 (124)
                       +|++|||+|....              ++.|+.+...+.+.+.+.    + ...+++++||..
T Consensus        74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~  137 (236)
T PRK06483         74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYV  137 (236)
T ss_pred             CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchh
Confidence             7999999985311              235566666665555442    1 024788888654

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.58  E-value=6e-14  Score=94.84  Aligned_cols=116  Identities=13%  Similarity=0.113  Sum_probs=83.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      ++++++|+|++|++|+++++.|++.|++|++++|++...+ ...+.+......++.++.+|+++++++.++++   ++|+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE-ALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            4578999999999999999999999999999999862111 11111111123467899999999999988876   4899


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                      +|||+|...              .++.|+.+...+++.+.    +.+ ..+++++||..
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~  142 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAA  142 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcc
Confidence            999998532              13456777777777664    333 35788888654

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.1e-14  Score=95.81  Aligned_cols=118  Identities=14%  Similarity=0.138  Sum_probs=82.7

Q ss_pred             CCCceEEEEccCC-hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG-YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g-~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+| +||+++++.|+++|++|++.+|+....+.. .+.... ....++.++++|+++++++.++++    
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGET-ADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3568899999996 899999999999999999998876221111 111111 122467899999999999988775    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                         ++|++|||+|...              .++.|+.+...+++.+.+.    +...+++++||..
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~  159 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVL  159 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh
Confidence               4799999998531              1245677777777776542    1124788877654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.58  E-value=2.9e-14  Score=94.88  Aligned_cols=112  Identities=15%  Similarity=0.153  Sum_probs=82.2

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cCE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VDV   78 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~   78 (124)
                      ++|||++|++|+++++.|+++|++|++++|++.+......+..+. ...++..+.+|++|++++++++++       +|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            589999999999999999999999999988752211111111111 123578999999999999888764       699


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                      |||++|...              .++.|..+..++++.+.+.    + .++++++||..
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~  137 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVV  137 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCcc
Confidence            999998642              1346778888888887653    3 46899998764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.9e-14  Score=94.68  Aligned_cols=110  Identities=17%  Similarity=0.160  Sum_probs=82.9

Q ss_pred             EEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc---cCEEEEe
Q 033236            7 LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR---VDVVICT   82 (124)
Q Consensus         7 li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~   82 (124)
                      +||||+|++|++++++|+++|++|++++|++.    .......... ..+++++.+|+++++++.++++.   +|++||+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRD----RLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            58999999999999999999999999999862    2111111111 35688999999999999999875   7999999


Q ss_pred             Ccccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|...              .++.|..+..++.++....+ ..+++++||...+
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~  128 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAV  128 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhc
Confidence            98532              13456778888888554444 5799999876543

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.2e-14  Score=96.86  Aligned_cols=118  Identities=17%  Similarity=0.131  Sum_probs=84.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++++++|+|++|+||+.+++.|+++|++ |++++|++.... ...+.... ....+.++.+|+++++++.++++     
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEA-LGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999988 999998762111 11111111 23457789999999999988876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~~  120 (124)
                        ++|++||++|...              .++.|..+..++++++.+..    ...+++++||...
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~  147 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA  147 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc
Confidence              4799999998532              13467778888877775432    1247888887654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.58  E-value=4.4e-14  Score=103.89  Aligned_cols=114  Identities=15%  Similarity=0.141  Sum_probs=86.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      +++++||||+|+||.++++.|+++|++|++++|++     ...+............+.+|++|++++.++++.       
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA-----EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999986     222222221234567789999999999888763       


Q ss_pred             cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...               .++.|+.++.++++.+.+.- ...++|++||...+
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  405 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL  405 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence            799999998541               13568888888888887642 13589999976543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.58  E-value=7.6e-14  Score=94.39  Aligned_cols=79  Identities=22%  Similarity=0.296  Sum_probs=62.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------c
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++..    ..+..+.+. ..++.++.+|++|+++++++++       +
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN----LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            589999999999999999999999999999998622    111112221 2357889999999999988875       4


Q ss_pred             cCEEEEeCccc
Q 033236           76 VDVVICTISGV   86 (124)
Q Consensus        76 ~d~vi~~a~~~   86 (124)
                      +|++|||+|..
T Consensus        77 id~li~naG~~   87 (259)
T PRK08340         77 IDALVWNAGNV   87 (259)
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=4e-14  Score=95.06  Aligned_cols=116  Identities=15%  Similarity=0.170  Sum_probs=81.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC--ChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA--DHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~-----   74 (124)
                      ++++++|||++|++|.++++.|++.|++|++++|++...+ ...+.+......++.++.+|++  +++++.++++     
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE-AVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999872211 1111122222345677888886  5665555543     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                        ++|+|||+++...               .++.|+.++.++++++.    +.+ ..+++++||..
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~  154 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSV  154 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHh
Confidence              4899999997531               13467778777777664    345 67899988754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.57  E-value=9.5e-14  Score=92.14  Aligned_cols=108  Identities=16%  Similarity=0.186  Sum_probs=81.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~   78 (124)
                      ++++|||++|++|+++++.|+++|++|++++|++...     +....  ..++.+..+|++|+++++++++     ++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD-----TALQA--LPGVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch-----HHHHh--ccccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            6899999999999999999999999999999987322     11111  2356788899999998888876     4899


Q ss_pred             EEEeCcccc----------------ceecchHHHHHHHHHHHHhC--CccEEEEecCC
Q 033236           79 VICTISGVH----------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~  118 (124)
                      |||++|...                .+..|..+...+.+++.+.-  ...+++++||.
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~  132 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ  132 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence            999997531                13456777888888776431  02467777764

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.57  E-value=3e-14  Score=99.40  Aligned_cols=116  Identities=16%  Similarity=0.083  Sum_probs=79.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCC--hHHHHHH---hcc-
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFAD--HRSLVEA---VKR-   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~--~~~~~~~---~~~-   75 (124)
                      ++.++||||+|+||++++++|+++|++|++++|+++..+... +..... ....+..+.+|+++  .+.++++   +.+ 
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            578999999999999999999999999999999873221111 111111 12356788899985  3444433   333 


Q ss_pred             -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                       +|++|||||...                .++.|+.++..+.+++.+    .+ ..++|++||...
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~  196 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAA  196 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhh
Confidence             569999998531                124577788777777654    44 468999987654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.7e-14  Score=92.42  Aligned_cols=108  Identities=19%  Similarity=0.230  Sum_probs=81.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~   78 (124)
                      ++++|||++|++|+++++.|++.|++|++++|+++     ..+   .....+++++.+|+++++++.++++     ++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~-----~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAA-----ALA---ALQALGAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH-----HHH---HHHhccceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            68999999999999999999999999999999862     111   1222356789999999999988643     3899


Q ss_pred             EEEeCcccc----------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236           79 VICTISGVH----------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~  119 (124)
                      +||++|...                .++.|+.++.++++++.+.  ....+++++||..
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~  132 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM  132 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc
Confidence            999998641                1346778888888888652  1124678877653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.57  E-value=3.5e-14  Score=96.04  Aligned_cols=110  Identities=24%  Similarity=0.300  Sum_probs=92.7

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      ..-|+||+|++|+.+++.|.+.|.+|++-.|.+    +....++....+. .+.+...|+.|+++++++++..++|||..
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d----~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI  138 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGD----EYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI  138 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCC----ccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence            467999999999999999999999999999876    2223333333333 47899999999999999999999999999


Q ss_pred             cc------ccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           84 SG------VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        84 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      |.      .++.++|..+.+.+++-|++.| +.|+|++|...
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lg  179 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLG  179 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcc
Confidence            83      2567899999999999999999 99999999653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=1.1e-13  Score=94.60  Aligned_cols=116  Identities=14%  Similarity=0.071  Sum_probs=82.8

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      |++|+++||||+  ++||+++++.|+++|++|++.+|+...  ....+......... ..+++|++|++++.++++.   
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            457899999997  799999999999999999999887411  11222221111222 5789999999998888753   


Q ss_pred             ----cCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           76 ----VDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        76 ----~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                          +|++|||||...                  .++.|+.+...+.+.+.+.- .-.+++++||..
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence                799999998531                  13567888888887776532 124788888654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=4.3e-14  Score=94.13  Aligned_cols=107  Identities=21%  Similarity=0.202  Sum_probs=81.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~v   79 (124)
                      |++++++|||++|+||+++++.|+++|++|++++|++...           ...++..+.+|++++ +.+.+.+.++|++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            3567899999999999999999999999999999876211           124578999999987 4444555579999


Q ss_pred             EEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           80 ICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      ||++|...               .++.|..++.++++++.+    .+ ..+++++||..
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  129 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIA  129 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChh
Confidence            99998431               134577788888887754    33 35899988754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=1.7e-13  Score=92.77  Aligned_cols=117  Identities=9%  Similarity=0.011  Sum_probs=81.5

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+  ++||.++++.|+++|++|++.+|+.... ....+........++..+++|++|++++.++++     
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            46789999997  8999999999999999999988764221 111122222223467889999999999888875     


Q ss_pred             --ccCEEEEeCcccc-------c-----------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH-------F-----------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~-------~-----------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                        ++|++|||+|...       .           ++.|..+...+++++.+.- .-.++|++||..
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~  150 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG  150 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence              3899999998431       1           1345566666666665432 125899888754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.56  E-value=5.8e-14  Score=95.63  Aligned_cols=115  Identities=17%  Similarity=0.176  Sum_probs=81.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------c
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------V   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~   76 (124)
                      |+++||||+|++|.++++.|+++|++|++++|+++..+ ...+...........++.+|+++++++.++++.       +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLA-QTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999998762111 111111111122345688999999988877653       7


Q ss_pred             CEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           77 DVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      |++||++|...              .++.|+.+...+++++.+    .+...+++++||..
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~  140 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA  140 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence            99999998532              235678888888888753    22135899888754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.56  E-value=4.6e-14  Score=106.78  Aligned_cols=118  Identities=16%  Similarity=0.122  Sum_probs=81.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+....+.........+..+.+|++|++++.++++       
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999862211111111111122357789999999999998886       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                      ++|++|||||....              ++.|..+...+.+.+    .+.+...+++++||..
T Consensus       493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~  555 (676)
T TIGR02632       493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKN  555 (676)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChh
Confidence            48999999985421              234555555554444    3333124799988754

>TIGR02415 23BDH acetoin reductases

Probab=99.56  E-value=9.4e-14  Score=93.42  Aligned_cols=112  Identities=17%  Similarity=0.136  Sum_probs=81.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++|+|++|+||.++++.|++.|++|+++.|++.    ...+....+  ...++.++.+|++|++++.++++       
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE----TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999998752    221222222  13457899999999999988765       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      ++|+|||++|...              .++.|+.+...+++++.+    .+...+++++||..
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  139 (254)
T TIGR02415        77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIA  139 (254)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchh
Confidence            3799999998531              134667777666666543    23125888888643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.56  E-value=1e-13  Score=92.50  Aligned_cols=112  Identities=19%  Similarity=0.156  Sum_probs=79.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+++|||++|++|+++++.|+++|++|+++.|..+   ....+.....  ...++.++.+|+++++++.++++       
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE---ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999888331   1111111111  23468899999999998888765       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                      ++|+|||++|....              ...|..+...+.+.+    .+.+ ..+++++||..
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~  139 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVN  139 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchh
Confidence            37999999985421              234666666554444    4445 57899998754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.56  E-value=1.9e-13  Score=92.65  Aligned_cols=117  Identities=15%  Similarity=0.066  Sum_probs=82.2

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCC-CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIG-LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++++++||||+  ++||+++++.|+++|++|++..|++.. ...+..+.... ......++++|++|++++.++++    
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            46789999986  899999999999999999888765421 11112222211 11346688999999999988875    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||+|...                  .++.|..+...+.+++.+.- .-.+++++||..
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence               3899999998531                  13567788877777776531 025888888754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=1.3e-13  Score=94.09  Aligned_cols=116  Identities=14%  Similarity=0.040  Sum_probs=80.5

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||++  +||+++++.|+++|++|++.+|+...  ....+.... .......+++|++|++++.++++    
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~--~~~~~~~~~-~~g~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL--GKRVKPLAE-SLGSDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH--HHHHHHHHH-hcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            3467899999996  99999999999999999998886411  111111111 11123478999999999988875    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                  .++.|..+..++++++.+.- .-.++|++||..
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~  148 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG  148 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence               3899999998531                  12456777777777665431 014788888654

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.1e-13  Score=91.92  Aligned_cols=109  Identities=20%  Similarity=0.192  Sum_probs=80.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~v   79 (124)
                      |+++||||+|++|+++++.|+++|++|++.+|++     ...+...  ...++.++++|+++++++.++++    ++|++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~-----~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR-----DDLEVAA--KELDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHH--HhccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            4799999999999999999999999999999986     1111111  11246788999999999998876    48999


Q ss_pred             EEeCcccc-------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           80 ICTISGVH-------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      |||+|+..                   .++.|..+..++++++.+.- .-.+++++||..
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~  133 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN  133 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence            99987310                   12456777778888776531 125888888654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.55  E-value=1.3e-13  Score=87.43  Aligned_cols=114  Identities=16%  Similarity=0.149  Sum_probs=84.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHH--HHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKL--QMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      ++++|+||+|++|.++++.|+++|+ .|+++.|++........  +.... ...++.++.+|+++++++.++++.     
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999985 68888887643322111  11111 234677899999999888887654     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                        +|.++|++|...              ..+.|+.+..++++++.+.+ .++++++||..
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~  138 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVA  138 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHH
Confidence              699999998432              24567889999999997776 67888888654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.1e-13  Score=94.57  Aligned_cols=111  Identities=13%  Similarity=0.095  Sum_probs=80.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |+|+++|||+ |+||+++++.|. +|++|++++|++...    .+..+.+.  ..++.++++|++|++++.++++     
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~   74 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENL----EAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL   74 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence            4578899997 799999999996 799999999976221    11112222  3357889999999999988875     


Q ss_pred             -ccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhC-CccEEEEecCC
Q 033236           75 -RVDVVICTISGVH-------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGM  118 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~  118 (124)
                       ++|++|||||...       .++.|..++.++++.+.+.- .-.+++++||.
T Consensus        75 g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         75 GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             CCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence             4899999998542       34678899999888887641 01345555543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=1e-13  Score=100.57  Aligned_cols=113  Identities=18%  Similarity=0.262  Sum_probs=84.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++|||++|+||..+++.|+++|++|++++++...   .......  ...+...+.+|+++++++.++++       
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~---~~l~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG---EALAAVA--NRVGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH---HHHHHHH--HHcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999885311   1111111  12234688999999998888775       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~  119 (124)
                      ++|++|||+|...              .++.|+.++.++.+++.+..   .-.++|++||..
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~  345 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSIS  345 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChh
Confidence            4899999998542              13578889999999987643   125899888754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.55  E-value=1.3e-13  Score=87.75  Aligned_cols=107  Identities=25%  Similarity=0.381  Sum_probs=86.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      ||+.|+||+|..|++++++..++|++|+++.|++        .+...  -+++.+++.|+.|++++.+.+.+.|+||...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~--------~K~~~--~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~   70 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNA--------SKLAA--RQGVTILQKDIFDLTSLASDLAGHDAVISAF   70 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeCh--------Hhccc--cccceeecccccChhhhHhhhcCCceEEEec
Confidence            6899999999999999999999999999999998        22222  1567899999999999999999999999988


Q ss_pred             ccccc--eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGVHF--RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +....  .+........+++.+..++ +.|++.+.+....
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL  109 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSL  109 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccce
Confidence            75421  1222444666888888888 8999999865443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.54  E-value=9.4e-14  Score=92.71  Aligned_cols=112  Identities=16%  Similarity=0.096  Sum_probs=80.4

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cCE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VDV   78 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~   78 (124)
                      ++||||+|+||.++++.|+++|++|++++|+.++......+.+.. ...++.++.+|+++++++.++++.       +|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999998887652211111111111 234688999999999998887653       799


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHH-----HhCCccEEEEecCCc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIR-----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ss~~  119 (124)
                      ++|++|...              .++.|+.++.++++++.     +.+ ..+++++||..
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~  138 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVS  138 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchh
Confidence            999998432              13467788888877653     123 46889888754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.54  E-value=4e-14  Score=95.52  Aligned_cols=109  Identities=19%  Similarity=0.335  Sum_probs=85.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++|+||||+||||+|+++.|..+|++|++++....    .......++ ..++++.+.-|+..+     ++..+|.|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ft----g~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~Iy   96 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFT----GRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIY   96 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccc----cchhhcchhccCcceeEEEeechhH-----HHHHhhhhh
Confidence            3578999999999999999999999999999987652    222333333 356788888777555     788899999


Q ss_pred             EeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|.+.          +....|..++.+.+..|.+.+  +|+++.|++-+|
T Consensus        97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVY  145 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVY  145 (350)
T ss_pred             hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeeccccc
Confidence            998644          234578999999999999988  789988876655

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=6.3e-14  Score=95.27  Aligned_cols=92  Identities=22%  Similarity=0.263  Sum_probs=79.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++|||++|.+|..|.+.|. .+++|+.++|.+                       +|++|++.+.+++++  +|+|||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCCEEEE
Confidence            349999999999999999998 678999988853                       899999999999984  799999


Q ss_pred             eCccccc----------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVHF----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+.+..          +..|..+..+++++|.+.|  -++|++|+-.+|
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVF  104 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVF  104 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEe
Confidence            9986643          4589999999999999999  589999975543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.53  E-value=2e-13  Score=100.51  Aligned_cols=114  Identities=17%  Similarity=0.141  Sum_probs=84.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++++++|||++++||.++++.|+++|++|++++|+...    ..+.... ...++..+++|+++++++.++++.      
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER----ARERADS-LGPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHH-hCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999998621    1122211 134567899999999998888753      


Q ss_pred             -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                       +|++|||+|...                .++.|+.++..+++++.+.    +.-.+++++||...
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~  144 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAG  144 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCccc
Confidence             899999998521                1346778888777777653    31138999887653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.53  E-value=1.8e-13  Score=103.78  Aligned_cols=115  Identities=15%  Similarity=0.083  Sum_probs=85.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|++..    .......+.. .++.++.+|+++++++.++++      
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~----~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA----AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH----HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999998722    1111111111 368899999999999888776      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                       ++|+||||+|...              .++.|..+..++++++.+    .+.-.+++++||...
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~  561 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA  561 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence             4899999998432              235678888888776653    331158998887643

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.53  E-value=3.2e-14  Score=97.32  Aligned_cols=99  Identities=28%  Similarity=0.323  Sum_probs=70.4

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG   85 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   85 (124)
                      ++||||+|+||+++++.|+++|++|++++|++.....     .   ...  .+  .|... +...+.+.++|+|||+++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~---~~~--~~--~~~~~-~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN-----T---KWE--GY--KPWAP-LAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc-----c---cce--ee--ecccc-cchhhhcCCCCEEEECCCC
Confidence            5899999999999999999999999999998733211     0   001  11  12222 4455677889999999985


Q ss_pred             cc------------ceecchHHHHHHHHHHHHhCCcc--EEEEecCC
Q 033236           86 VH------------FRSHNILMQLKLVDAIREAGNVK--KRKLNEGM  118 (124)
Q Consensus        86 ~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ss~  118 (124)
                      ..            +++.|+.++.++++++.+.+ ++  +++++|+.
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~  113 (292)
T TIGR01777        68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAV  113 (292)
T ss_pred             CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeE
Confidence            32            13457899999999999988 53  45555543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.53  E-value=1e-13  Score=89.60  Aligned_cols=114  Identities=14%  Similarity=0.193  Sum_probs=78.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc------
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      +++|+|+.|++|..+++.|++++ .+++++.|++... ....+....+.  ...+.++.+|++|++++.++++.      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            58999999999999999999998 6899999983111 12222333332  45688999999999999999864      


Q ss_pred             -cCEEEEeCccccc--------------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                       ++.|||++|....              ..+-+.+..++.+.+.+.. ++.+++.||...
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~  139 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISS  139 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhH
Confidence             6889999986421              1234678888888887776 789888887653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=3.4e-13  Score=89.90  Aligned_cols=114  Identities=17%  Similarity=0.210  Sum_probs=81.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      ++++++|+|++|++|.++++.|+++|++|++++|++.    ......+... ..++.++++|+++++++.+++++     
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN----KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999862    1111111111 23678999999999988887653     


Q ss_pred             --cCEEEEeCcccc------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           76 --VDVVICTISGVH------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        76 --~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                        +|.++++++...            ..+.|..+...+++.+.+.- .-.+++++||..
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence              699999997532            12455666666666665531 024788887653

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.4e-13  Score=92.54  Aligned_cols=116  Identities=16%  Similarity=0.039  Sum_probs=79.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCc------hHHHHHhhhhc--cCCeEEEEcccCChHHHHHHh
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD------IDKLQMLLSFK--KQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      .+|+++||||+++||.++++.|++.|++|++++|+..+..      +......+.+.  ...+.++++|+++++++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4688999999999999999999999999999999853210      11111111111  234678999999999998887


Q ss_pred             c-------ccCEEEEeC-ccc------c-c-----------eecchHHHHHHHHHHHH----hCCccEEEEecCC
Q 033236           74 K-------RVDVVICTI-SGV------H-F-----------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGM  118 (124)
Q Consensus        74 ~-------~~d~vi~~a-~~~------~-~-----------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~  118 (124)
                      +       ++|++|||+ |..      . .           ++.|+.+...+++++.+    .+ -.+||++||.
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~  160 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDG  160 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCc
Confidence            5       389999999 631      1 1           13355566666555543    32 3589888874

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.8e-13  Score=90.37  Aligned_cols=116  Identities=10%  Similarity=0.011  Sum_probs=78.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++|||+++++|+++++.|+++|++|+++.|++...++. .+.... ....+..+.+|++++++++++++       
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~-~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDT-YEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999987322111 111211 13456788999999998887763       


Q ss_pred             -ccCEEEEeCcccc---c------------eecchHHHHHHHHH----HHHhCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH---F------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~---~------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~  119 (124)
                       ++|++|||+|...   .            .+.|..+...+++.    +.+.+.-.+++++||..
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~  146 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD  146 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence             5899999997321   1            11233444444433    33332125888888754

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3.8e-13  Score=89.91  Aligned_cols=117  Identities=13%  Similarity=0.144  Sum_probs=80.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHh-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAV-----   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-----   73 (124)
                      |++++++|||++|++|+++++.|+++|++|++++|++...+.. .+.+..........+.+|+++  .+++.+++     
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV-YDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH-HHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            4468899999999999999999999999999999987322111 111111122346678899875  34454443     


Q ss_pred             ---cccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           74 ---KRVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        74 ---~~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                         ..+|++||++|...               .++.|+.+..++++++.+    .+ ..+++++||..
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~  149 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESH  149 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccc
Confidence               35799999998531               135678887777777754    33 36888888754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=3.8e-13  Score=91.12  Aligned_cols=116  Identities=15%  Similarity=0.036  Sum_probs=81.6

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+  ++||+++++.|+++|++|++.+|+...  ....+.... +.....++++|++|++++.++++    
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAE-ELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHHH-hhccceEEecCcCCHHHHHHHHHHHHH
Confidence            356889999998  499999999999999999999987521  111121111 11234678999999999988865    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                  .++.|..+...+.+.+.+.- .-.+++++||..
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence               3799999998531                  13467778888777776532 014788887654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=4e-13  Score=90.83  Aligned_cols=118  Identities=12%  Similarity=0.089  Sum_probs=80.5

Q ss_pred             CCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCC------CchH-HHHHhhhh--ccCCeEEEEcccCChHHHH
Q 033236            2 GKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIG------LDID-KLQMLLSF--KKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         2 ~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~------~~~~-~~~~~~~~--~~~~~~~~~~D~~~~~~~~   70 (124)
                      ++++++||||+|  +||.+++++|+++|++|++..|+...      .... ..+..+..  ...++.++++|+++++++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            468899999984  89999999999999999887643210      0011 11111122  1345788999999999998


Q ss_pred             HHhcc-------cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           71 EAVKR-------VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        71 ~~~~~-------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++++.       +|++||++|...              .++.|+.+...+.+++.    +.+ ..+++++||...
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~  158 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQF  158 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccccc
Confidence            88753       799999998432              13457777666654443    333 358999987654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=1.9e-13  Score=91.72  Aligned_cols=114  Identities=9%  Similarity=0.057  Sum_probs=79.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      .+++++|+|++|++|..+++.|+++|++|++++|++..    ........  ...++..+++|+++++++.++++.    
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK----LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999988621    11111111  134678899999999888776653    


Q ss_pred             ---cCEEEEeCcccc-----------------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           76 ---VDVVICTISGVH-----------------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ---~d~vi~~a~~~~-----------------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                         +|+|||++|...                       .++.|+.+...+.+.+.+    .....+++++||..
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~  153 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA  153 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence               799999998422                       123456666655554432    21124688887654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=4.2e-13  Score=91.01  Aligned_cols=116  Identities=12%  Similarity=0.050  Sum_probs=79.7

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||++  +||.++++.|+++|++|++.+|+. .. .+..+.+.... ....++++|++|+++++++++    
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~-~~~~~~l~~~~-g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VL-EKRVKPLAEEI-GCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HH-HHHHHHHHHhc-CCceEEEccCCCHHHHHHHHHHHHH
Confidence            4568899999997  899999999999999999888763 11 11122221111 122467899999999988875    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||+|...                  .++.|..+...+++++.+.- .-.++|++||..
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~  149 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYG  149 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCc
Confidence               3899999998531                  12456677777777665431 124888888754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=5e-13  Score=91.27  Aligned_cols=116  Identities=15%  Similarity=0.051  Sum_probs=81.9

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |.+|+++||||+  ++||.++++.|+++|++|++..|+...  ....+.+.. +......+++|++|++++.++++    
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--KKRVEPLAA-ELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--HHHHHHHHH-hcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            456889999996  899999999999999999888775310  111121111 11235578999999999998875    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                  .++.|+.+...+++.+.+.- .-.+++++||..
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence               3899999998532                  12467788888888776542 125788887653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=5e-13  Score=90.71  Aligned_cols=116  Identities=16%  Similarity=0.103  Sum_probs=78.3

Q ss_pred             CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||  +++||+++++.|+++|++|++..|+..  .....+.+.. .......+++|++|++++.++++    
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK--LEERVRKMAA-ELDSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH--HHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHHHHHH
Confidence            34678999996  679999999999999999998877531  1112222211 11234578999999999998875    


Q ss_pred             ---ccCEEEEeCccccc-------------------eecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVHF-------------------RSHNILMQLKLVDAIREA--GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~  119 (124)
                         ++|++|||||....                   .+.|..+...+.+.+.+.  ....+++++||..
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~  149 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLG  149 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccc
Confidence               38999999985421                   123556666666655432  1125788888654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.50  E-value=3.4e-13  Score=91.62  Aligned_cols=82  Identities=18%  Similarity=0.205  Sum_probs=57.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHH----HHh------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLV----EAV------   73 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~------   73 (124)
                      +.++||||+|+||+++++.|+++|++|+++.|+..+......+.+..........+.+|++|++++.    +++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999887654211111111121111234667899999987553    332      


Q ss_pred             -cccCEEEEeCcc
Q 033236           74 -KRVDVVICTISG   85 (124)
Q Consensus        74 -~~~d~vi~~a~~   85 (124)
                       .++|++|||||.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence             248999999984

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.50  E-value=2.7e-13  Score=91.63  Aligned_cols=115  Identities=16%  Similarity=0.125  Sum_probs=78.6

Q ss_pred             eEEEEccCChhcHHHHHHHhh----CCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhccc---
Q 033236            5 KVLVVGGTGYIGRRIVKASLA----QGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRV---   76 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~---   76 (124)
                      .++||||+++||.+++++|++    .|++|+++.|++...+.. .+.+.. .....+.++.+|++++++++++++.+   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL-KAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH-HHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            579999999999999999997    799999999986322111 111111 11235788999999999988877531   


Q ss_pred             --------CEEEEeCcccc-----------------ceecchHHHHHHHHHHHHh-----CCccEEEEecCCcc
Q 033236           77 --------DVVICTISGVH-----------------FRSHNILMQLKLVDAIREA-----GNVKKRKLNEGMIP  120 (124)
Q Consensus        77 --------d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ss~~~  120 (124)
                              |++|||||...                 .++.|+.+...+.+.+.+.     +...+++++||...
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~  154 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA  154 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh
Confidence                    58999998421                 1234667776666666543     11247888887643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=7.9e-13  Score=89.91  Aligned_cols=116  Identities=14%  Similarity=0.088  Sum_probs=79.5

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||++  +||+++++.|+++|++|++.+|+. .. ....+.... .......+.+|++|+++++++++    
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hH-HHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHHHHh
Confidence            3467899999985  999999999999999999888863 11 112222211 12345688999999999998875    


Q ss_pred             ---ccCEEEEeCccccc-------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVHF-------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||....                   ++.|..+...+.+++.+.- .-.+++++||..
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~  148 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG  148 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCC
Confidence               37999999984210                   2346666666777664421 124788888654

>PRK05599 hypothetical protein; Provisional

Probab=99.50  E-value=5.2e-13  Score=89.86  Aligned_cols=115  Identities=15%  Similarity=0.150  Sum_probs=76.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      |+++||||+++||.+++++|+ +|++|++++|++...+. ..+.++......+.++++|++|+++++++++       ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQG-LASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHH-HHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 59999999998632211 1111222122347889999999998888764       38


Q ss_pred             CEEEEeCccccc--------------eecchHHHHHHH----HHHHHhCCccEEEEecCCcc
Q 033236           77 DVVICTISGVHF--------------RSHNILMQLKLV----DAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |++|||+|....              ...|..+...+.    +.+.+.+.-.+++++||...
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~  140 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG  140 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence            999999986421              123444444443    33333321258998887653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=2.7e-13  Score=88.45  Aligned_cols=115  Identities=16%  Similarity=0.169  Sum_probs=86.7

Q ss_pred             CceEEEEcc-CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            3 KSKVLVVGG-TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga-~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .++++|||. .|+||.++++++.++|+.|++..|+.+..+     .+.  .+.++.....|+++++++.++..       
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~-----~L~--~~~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA-----QLA--IQFGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh-----hHH--HhhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            467899985 599999999999999999999999873322     221  14568899999999998887643       


Q ss_pred             -ccCEEEEeCccc--------------cceecchHHHHHHHHHHHHh--CCccEEEEecCCcccccC
Q 033236           75 -RVDVVICTISGV--------------HFRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIPFFLF  124 (124)
Q Consensus        75 -~~d~vi~~a~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~~~~~  124 (124)
                       ++|+++||||..              ..+.+|+.|..++.+++.+.  +....|+++.|...+..|
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf  146 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF  146 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc
Confidence             289999999843              23678888887777777542  112589999988876554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.49  E-value=4.5e-13  Score=107.78  Aligned_cols=116  Identities=17%  Similarity=0.267  Sum_probs=89.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhh----------hccCCeEEEEcccCC---
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLS----------FKKQGAHLIEASFAD---   65 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~---   65 (124)
                      .++++|||++|++|.++++.|++.+    ++|+++.|+....+.  .+....          ....+++++.+|+++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~--~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG--LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH--HHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence            3689999999999999999999876    899999997633211  111110          012368899999974   


Q ss_pred             ---hHHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           66 ---HRSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        66 ---~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                         .+.+..+.+++|+|||+|+..+.       ...|+.++.++++++.+.+ +++++|+||...|
T Consensus      1049 gl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1049 GLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred             CcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeec
Confidence               46677788889999999987653       2468999999999999887 7899999987654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN00015 protochlorophyllide reductase

Probab=99.49  E-value=5.8e-13  Score=92.39  Aligned_cols=110  Identities=16%  Similarity=0.169  Sum_probs=79.4

Q ss_pred             EEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            7 LVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         7 li~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      +||||+++||.++++.|+++| ++|++.+|+..    ...+....+.  ...+.++.+|++|.++++++++       ++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   76 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFL----KAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL   76 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHH----HHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999 99999998762    2112222221  2457788999999999888765       37


Q ss_pred             CEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CC-ccEEEEecCCcc
Q 033236           77 DVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GN-VKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~-~~~~i~~ss~~~  120 (124)
                      |++|||||...               .++.|+.+...+++.+.+.    +. ..++|++||...
T Consensus        77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~  140 (308)
T PLN00015         77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG  140 (308)
T ss_pred             CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence            99999998531               1346777777776665442    20 258999987643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.49  E-value=4.1e-13  Score=86.95  Aligned_cols=115  Identities=19%  Similarity=0.216  Sum_probs=84.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+.+++||||+++||..+++.+.+.|-+|++..|+.     .+.+.... ..+.+....||+.|.++..++.+       
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e-----~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNE-----ERLAEAKA-ENPEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH-----HHHHHHHh-cCcchheeeecccchhhHHHHHHHHHhhCC
Confidence            367899999999999999999999999999999997     33332222 34678899999999987777765       


Q ss_pred             ccCEEEEeCccccc----------------eecchHHHHHHHHHHHHhC---CccEEEEecCCcccc
Q 033236           75 RVDVVICTISGVHF----------------RSHNILMQLKLVDAIREAG---NVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ~~d~vi~~a~~~~~----------------~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~~~  122 (124)
                      ..+++|||||..+-                ...|..+..++...+.++-   +-..+|.+||...+.
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv  144 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV  144 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC
Confidence            27999999995421                1245666666666665431   135788888876543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=1.1e-12  Score=88.82  Aligned_cols=112  Identities=14%  Similarity=0.061  Sum_probs=78.9

Q ss_pred             CceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++|||+  +++||.++++.|+++|++|++.+|+...   ...+.........+.++++|++|+++++++++      
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL---RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch---hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            478999999  8999999999999999999999876411   11111111112357789999999999888765      


Q ss_pred             -ccCEEEEeCcccc-------c-----------eecchHHHHHHHHHHHHhC-CccEEEEecC
Q 033236           75 -RVDVVICTISGVH-------F-----------RSHNILMQLKLVDAIREAG-NVKKRKLNEG  117 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------~-----------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss  117 (124)
                       ++|++|||||...       +           ++.|..+...+.+.+.+.- .-.+++++|+
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~  146 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF  146 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence             3899999998541       1           2456677777777765431 1247777663

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=1.8e-12  Score=87.95  Aligned_cols=116  Identities=13%  Similarity=0.015  Sum_probs=79.8

Q ss_pred             CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||  +++||.++++.|+++|++|++..|....  ....+..... ......+++|++|+++++++++    
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAE-FGSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHh-cCCcceeeccCCCHHHHHHHHHHHHH
Confidence            45688999996  6899999999999999999888664211  1111211111 1223478999999999998875    


Q ss_pred             ---ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                   .++.|..+...+.+++.+.- .-.+++++||..
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~  148 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  148 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence               3899999998531                   02356677777777776531 125788888654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.4e-12  Score=85.11  Aligned_cols=96  Identities=26%  Similarity=0.373  Sum_probs=76.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi   80 (124)
                      |+++|||++|++|+++++.|.++ ++|++++|++.                   .+++|++|+++++++++   ++|++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv   60 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV   60 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999998 99999999761                   46899999999999887   589999


Q ss_pred             EeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           81 CTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        81 ~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      |++|....              ++.|..++.++++++.+.- ...+++++||..
T Consensus        61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence            99985321              2456778888888876531 125788888654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.45  E-value=1.8e-12  Score=87.92  Aligned_cols=104  Identities=29%  Similarity=0.429  Sum_probs=80.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++|+||+|++|++++++|+++|++|.+..|++        +....+. ..+++..+|+.++.++..++++.+.++++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~--------~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~   71 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP--------EAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS   71 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCH--------HHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence            5799999999999999999999999999999998        3333333 789999999999999999999999999988


Q ss_pred             cccc----ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           84 SGVH----FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        84 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +...    ..........+..+++. .+ +++++.+|..
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~  108 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVL  108 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhc-CC-ceEEEEeccC
Confidence            7443    22233444444444443 33 5778877744

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.45  E-value=1.7e-12  Score=83.59  Aligned_cols=115  Identities=12%  Similarity=0.047  Sum_probs=85.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      .+..+|||++++||+++++.|+++|++|.+.+++.... ++....+..  ...-..+.||++++++++..++.       
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-~ata~~L~g--~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-EATAGDLGG--YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-HHHHhhcCC--CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999887322 222222222  13456899999999999887653       


Q ss_pred             cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----C-CccEEEEecCCcc
Q 033236           76 VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----G-NVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~-~~~~~i~~ss~~~  120 (124)
                      +++++||||..+.              ...|..|+..+.+++.+.    + ..-+||.+||...
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVG  154 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVG  154 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhc
Confidence            8999999997642              346788888888777654    1 1238999998753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.44  E-value=7.2e-13  Score=100.26  Aligned_cols=88  Identities=24%  Similarity=0.272  Sum_probs=69.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      +.|+++||||+|++|+++++.|.++|++|..                          ..+|++|.+.+.+.++  ++|+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~~pd~V  432 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNVKPTHV  432 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhhCCCEE
Confidence            4578999999999999999999999987631                          1135778888888876  68999


Q ss_pred             EEeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||+|+...             .+..|+.++.+++++|.+.+ +++++++|
T Consensus       433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss  481 (668)
T PLN02260        433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFAT  481 (668)
T ss_pred             EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcc
Confidence            99998542             13578999999999999998 66554434

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=1.5e-12  Score=88.00  Aligned_cols=117  Identities=19%  Similarity=0.209  Sum_probs=89.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHH--HHHhhhhccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDK--LQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      |+|..+|||-+|.-|..+++.|+++||.|+.+.|..+......  .-......+.++.++.+|++|...+.++++.  +|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            4578999999999999999999999999999988865433332  2233333455688999999999999999985  78


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCc-cEEEEecCC
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNV-KKRKLNEGM  118 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ss~  118 (124)
                      -|+|.++...          ..+.+..|+.+++++++-.+.. .||...||+
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS  132 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS  132 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH
Confidence            9999987432          2356688999999999988731 344444443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.43  E-value=1.6e-12  Score=86.59  Aligned_cols=103  Identities=20%  Similarity=0.268  Sum_probs=72.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      |+++||||+|+||+++++.|+++|  ..+....|+...          .....++.++++|++++++++++.+   ++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999985  556555665411          1123567899999999998877654   5899


Q ss_pred             EEEeCccccc--------------------eecchHHHHHHHHHHHH----hCCccEEEEecC
Q 033236           79 VICTISGVHF--------------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEG  117 (124)
Q Consensus        79 vi~~a~~~~~--------------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss  117 (124)
                      +|||+|....                    ...|+.+...+++.+.+    .+ ..+++++||
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss  132 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISA  132 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEee
Confidence            9999986421                    13455566556665544    33 357777764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.42  E-value=7.6e-13  Score=89.11  Aligned_cols=102  Identities=25%  Similarity=0.337  Sum_probs=70.4

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEEEeCc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVICTIS   84 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~   84 (124)
                      |+||||+|+||++++..|.+.|++|++++|+++..    ...    ....+.       .-+.+.+..+ ++|+|||.||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~----~~~----~~~~v~-------~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA----SQN----LHPNVT-------LWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch----hhh----cCcccc-------ccchhhhcccCCCCEEEECCC
Confidence            58999999999999999999999999999998221    111    111111       2233444444 7999999999


Q ss_pred             ccc------------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           85 GVH------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        85 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      ..=            ..+..+..+..+.+...+.....+..+++|...|+
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyY  115 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYY  115 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEe
Confidence            531            12445788899999998765334455555766664

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.42  E-value=6.6e-12  Score=85.77  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=83.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      .+|.++|||++.+||++++.+|++.|.+|++.+|+++..++.......... ...+..+.+|++++++.+++++      
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999998433222222222111 3458899999999887777654      


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHH-HHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILM-QLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~-~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        ++|+++||||...               ....|..| ...+.+++.+    .+ -..++++|+...
T Consensus        87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~  153 (270)
T KOG0725|consen   87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAG  153 (270)
T ss_pred             CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEecccc
Confidence              3899999998542               13456674 4444444433    23 467888886643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.40  E-value=1.1e-11  Score=83.36  Aligned_cols=118  Identities=18%  Similarity=0.137  Sum_probs=82.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-chHHHHHhhhhcc-CCeEEEEcccCC-hHHHHHHhcc--
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKK-QGAHLIEASFAD-HRSLVEAVKR--   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~--   75 (124)
                      |++++++|||+++++|.++++.|++.|+.|++..|+.... .+....... ... ..+....+|+++ +++++.+++.  
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999998888876331 111111111 111 356788899998 8888777652  


Q ss_pred             -----cCEEEEeCcccc----c-----------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           76 -----VDVVICTISGVH----F-----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 -----~d~vi~~a~~~~----~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                           +|+++||||...    .           ++.|+.+...+.+.+.+....++++.+||..
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~  145 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVA  145 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCch
Confidence                 899999999642    1           2456777777777444432112888888765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.38  E-value=5.2e-12  Score=83.01  Aligned_cols=117  Identities=17%  Similarity=0.179  Sum_probs=85.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      +|+++++|+.|+||..+.++|+++|..+.++..+.+.  .+...++.. .++..+.++++|+++..++++++++      
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En--~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN--PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC--HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999888777665522  122222222 2355688999999999999999875      


Q ss_pred             -cCEEEEeCccccc------eecch----HHHHHHHHHHHHh--CCccEEEEecCCccc
Q 033236           76 -VDVVICTISGVHF------RSHNI----LMQLKLVDAIREA--GNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~~------~~~~~----~~~~~~~~~~~~~--~~~~~~i~~ss~~~~  121 (124)
                       +|++||+||....      ...|.    .++...++++.+.  |+..-++.+||...+
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL  141 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL  141 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence             8999999997642      33453    4455566666553  234578888877643

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.4e-11  Score=79.36  Aligned_cols=99  Identities=19%  Similarity=0.200  Sum_probs=73.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      |+++|+||+|++| .+++.|++.|++|++.+|++    ........... ...+.++.+|++|++++.+++++       
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~----~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARRE----VKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCH----HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999997665 59999999999999999876    22111111121 34678899999999999998864       


Q ss_pred             cCEEEEeCccccceecchHHHHHHHHHHHHhCCcc----EEEEec
Q 033236           76 VDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK----KRKLNE  116 (124)
Q Consensus        76 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~s  116 (124)
                      +|.+|+..-        ..+..++.++|++.+ ++    +++++-
T Consensus        76 id~lv~~vh--------~~~~~~~~~~~~~~g-v~~~~~~~~h~~  111 (177)
T PRK08309         76 FDLAVAWIH--------SSAKDALSVVCRELD-GSSETYRLFHVL  111 (177)
T ss_pred             CeEEEEecc--------ccchhhHHHHHHHHc-cCCCCceEEEEe
Confidence            566665443        557889999999998 77    787665

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.37  E-value=1.5e-11  Score=80.73  Aligned_cols=100  Identities=20%  Similarity=0.203  Sum_probs=73.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC-CCeEEE-EeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc--
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GHETYV-LQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      |..+.++||||+++||-.++++|++. |.++++ ..|+++.    ..+.++.+  .++++.+++.|+++.++++++.+  
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~----a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V   76 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEK----AATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV   76 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHH----hhHHHHHhhccCCceEEEEEecccHHHHHHHHHHH
Confidence            77889999999999999999999875 555544 4565622    23333332  37899999999999988888765  


Q ss_pred             -------ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH
Q 033236           75 -------RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR  104 (124)
Q Consensus        75 -------~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~  104 (124)
                             ++|.+|||||...               .+++|..+...+.+++.
T Consensus        77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l  128 (249)
T KOG1611|consen   77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL  128 (249)
T ss_pred             HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence                   3799999999542               25677666665555553

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.37  E-value=1.5e-11  Score=87.14  Aligned_cols=98  Identities=22%  Similarity=0.313  Sum_probs=79.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++|.|+ |++|+.++..|++++ .+|++.+|+.     .+..+.......+++..+.|+.|.+.+.+++++.|+|||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~-----~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK-----EKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH-----HHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            478999997 999999999999998 9999999997     333333332345899999999999999999999999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++++..        ..+++++|.+.| + +++-+|
T Consensus        75 ~~p~~~--------~~~i~ka~i~~g-v-~yvDts   99 (389)
T COG1748          75 AAPPFV--------DLTILKACIKTG-V-DYVDTS   99 (389)
T ss_pred             eCCchh--------hHHHHHHHHHhC-C-CEEEcc
Confidence            998532        347888888888 3 565555

>PRK06720 hypothetical protein; Provisional

Probab=99.37  E-value=5.6e-12  Score=80.65  Aligned_cols=83  Identities=14%  Similarity=0.147  Sum_probs=62.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      +++.++||||++++|..+++.|++.|++|.+.+|+....+ ........ ......++.+|+++++++.++++       
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ-ATVEEITN-LGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999998762211 11111111 13346688999999998888664       


Q ss_pred             ccCEEEEeCccc
Q 033236           75 RVDVVICTISGV   86 (124)
Q Consensus        75 ~~d~vi~~a~~~   86 (124)
                      ++|.+|||+|..
T Consensus        93 ~iDilVnnAG~~  104 (169)
T PRK06720         93 RIDMLFQNAGLY  104 (169)
T ss_pred             CCCEEEECCCcC
Confidence            489999999854

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.36  E-value=1.4e-11  Score=88.77  Aligned_cols=118  Identities=18%  Similarity=0.275  Sum_probs=90.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHH-------HHhhhhc------cCCeEEEEcccCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKL-------QMLLSFK------KQGAHLIEASFAD   65 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~-------~~~~~~~------~~~~~~~~~D~~~   65 (124)
                      .+++++||||+||+|+.+++.|++..   -+++++.|...+.+.+..       +..+.+.      -.++..+.||+++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            36899999999999999999998753   488888888755433322       1111111      1357788999986


Q ss_pred             h------HHHHHHhcccCEEEEeCccccce-------ecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           66 H------RSLVEAVKRVDVVICTISGVHFR-------SHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        66 ~------~~~~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +      ++++.+.+.+|+|+|+|+.+++.       ..|..|++++++.|.+..+.+-++++|+..
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy  157 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAY  157 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhh
Confidence            5      56777788999999999987653       468999999999999987789999999654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=1.2e-11  Score=84.70  Aligned_cols=116  Identities=16%  Similarity=0.214  Sum_probs=85.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------c
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------V   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~   76 (124)
                      .+++|||++.++|..++.++..+|++|+++.|+.....+.............+.+..+|+.|.+++.+++++       +
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            479999999999999999999999999999999733222222211111122366888999999999999875       6


Q ss_pred             CEEEEeCccc--------------cceecchHHHHHHHHHHHHhCC-c---cEEEEecCCc
Q 033236           77 DVVICTISGV--------------HFRSHNILMQLKLVDAIREAGN-V---KKRKLNEGMI  119 (124)
Q Consensus        77 d~vi~~a~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~~ss~~  119 (124)
                      |.+++|||..              ...+.|..++.+++++.....+ .   .+|+++||..
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~  174 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL  174 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence            9999999843              1135788999999988876431 2   2788777544

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.33  E-value=3.2e-11  Score=82.61  Aligned_cols=112  Identities=13%  Similarity=0.097  Sum_probs=85.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+.|+|||..++.|..++++|.++|+.|.+-+-.+++.     +.+.... +++...++.|++++++++++.+       
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-----e~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-----ESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-----HHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            46699999999999999999999999999988665332     2222222 6788899999999999999875       


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMI  119 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~  119 (124)
                        +...||||||...               ..++|..|+.++.++..+.=  .-.|+|++||..
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~  167 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL  167 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc
Confidence              3789999998442               13578888877777765420  126999999765

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.32  E-value=3.1e-11  Score=76.80  Aligned_cols=108  Identities=22%  Similarity=0.337  Sum_probs=89.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|..+|.||+|-+|+.+++++.+.+  .+|+++.|.... +        +.....+.....|.+.-+++...+.+.|+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d--------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV   86 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-D--------PATDKVVAQVEVDFSKLSQLATNEQGPDV   86 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-C--------ccccceeeeEEechHHHHHHHhhhcCCce
Confidence            678899999999999999999999987  699998887411 1        11234567788999999999999999999


Q ss_pred             EEEeCccc-------cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGV-------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      .+++.|.+       .++.++.......++++++.| +++|+++||.
T Consensus        87 ~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~  132 (238)
T KOG4039|consen   87 LFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSA  132 (238)
T ss_pred             EEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEecc
Confidence            99997755       357788888999999999999 8999999865

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.32  E-value=2.9e-11  Score=83.87  Aligned_cols=118  Identities=13%  Similarity=0.067  Sum_probs=76.4

Q ss_pred             CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHh-------hhhcc----CCeEEEEccc--CC
Q 033236            1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQML-------LSFKK----QGAHLIEASF--AD   65 (124)
Q Consensus         1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~----~~~~~~~~D~--~~   65 (124)
                      |++|+++||||  +++||.++++.|++.|++|++ .|+....+.......       .....    .....+.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            45789999999  799999999999999999988 665422211111110       00011    1145788888  33


Q ss_pred             h------------------HHHHHHhc-------ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH
Q 033236           66 H------------------RSLVEAVK-------RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR  104 (124)
Q Consensus        66 ~------------------~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~  104 (124)
                      +                  +++.++++       ++|++|||||...                .++.|+.+...+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            3                  36666654       3899999996311                13567888888887776


Q ss_pred             HhC-CccEEEEecCCc
Q 033236          105 EAG-NVKKRKLNEGMI  119 (124)
Q Consensus       105 ~~~-~~~~~i~~ss~~  119 (124)
                      +.- .-.++|++||..
T Consensus       166 p~m~~~G~II~isS~a  181 (303)
T PLN02730        166 PIMNPGGASISLTYIA  181 (303)
T ss_pred             HHHhcCCEEEEEechh
Confidence            641 015899888654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.29  E-value=3.7e-11  Score=100.47  Aligned_cols=118  Identities=18%  Similarity=0.160  Sum_probs=88.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCC---------ch------------------------------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGL---------DI------------------------------   42 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~---------~~------------------------------   42 (124)
                      +++++||||+++||..++++|+++ |++|++++|++...         +.                              
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            568999999999999999999988 69999999983100         00                              


Q ss_pred             ----HHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------ccCEEEEeCcccc--------------ceecchHHH
Q 033236           43 ----DKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------RVDVVICTISGVH--------------FRSHNILMQ   96 (124)
Q Consensus        43 ----~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~~~--------------~~~~~~~~~   96 (124)
                          +....+..+  ....+.++.+|++|.+++.++++      ++|.|||+||...              .++.|+.|.
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence                000111111  12457889999999999988876      3899999999542              246789999


Q ss_pred             HHHHHHHHHhCCccEEEEecCCccc
Q 033236           97 LKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        97 ~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .++++++.... .++++++||...+
T Consensus      2157 ~~Ll~al~~~~-~~~IV~~SSvag~ 2180 (2582)
T TIGR02813      2157 LSLLAALNAEN-IKLLALFSSAAGF 2180 (2582)
T ss_pred             HHHHHHHHHhC-CCeEEEEechhhc
Confidence            99999998776 6789988887644

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.29  E-value=1.3e-11  Score=83.55  Aligned_cols=117  Identities=21%  Similarity=0.302  Sum_probs=91.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      .++++|||++|+||++.+..+.+.-  ++.+.++.-.--..  .....+....++..++++|+.+...+..++.  .+|.
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence            3679999999999999999999863  67777665431111  1122222246789999999999999999886  5999


Q ss_pred             EEEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|.|+..          .+.+.|+.++..+++++..+|++++++++|+.-+|
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVY  136 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVY  136 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccccee
Confidence            99998744          23568899999999999999779999999987766

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.27  E-value=7.1e-11  Score=84.06  Aligned_cols=113  Identities=33%  Similarity=0.359  Sum_probs=81.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh-hhccCCeEEEEcccCCh-HHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL-SFKKQGAHLIEASFADH-RSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~-~~~~~~~~~----   75 (124)
                      +.++|+|+||+|.+|+.+++.|+++|+.|.++.|+.    +...+... ...+.....+..|...+ +.+.++.+.    
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~----~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDE----QKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccCh----hhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence            346899999999999999999999999999999997    33333332 22344556666665544 444555543    


Q ss_pred             cCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           76 VDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      ..+++-+++...-       ..++..|++|++++|...| ++|++++++..
T Consensus       154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~  203 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIG  203 (411)
T ss_pred             ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeec
Confidence            3356666653322       2477899999999999999 99999997543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=99.25  E-value=2.2e-10  Score=81.84  Aligned_cols=95  Identities=23%  Similarity=0.277  Sum_probs=69.8

Q ss_pred             EEEEccCChhcHHHHHHHhhCC-C-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            6 VLVVGGTGYIGRRIVKASLAQG-H-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+|.|+ |.+|+.+++.|++.+ . +|++.+|+.    ....+....+...+++.+++|+.|++++.+++++.|+||||+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~----~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP----EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH----HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH----HHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            689999 999999999999987 4 899999997    232333333356789999999999999999999999999999


Q ss_pred             ccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           84 SGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      |+.        ....++++|.+.|  .+++-.
T Consensus        76 gp~--------~~~~v~~~~i~~g--~~yvD~   97 (386)
T PF03435_consen   76 GPF--------FGEPVARACIEAG--VHYVDT   97 (386)
T ss_dssp             SGG--------GHHHHHHHHHHHT---EEEES
T ss_pred             ccc--------hhHHHHHHHHHhC--CCeecc
Confidence            964        2446777887777  355543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.25  E-value=7.8e-11  Score=74.90  Aligned_cols=112  Identities=14%  Similarity=0.098  Sum_probs=85.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~v   79 (124)
                      ++.+++||+.-+||+.+++.|+..|.+|+++.|++     +....+-.....-++-+++|+++.+.+.+++-.   +|.+
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~-----a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE-----ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCH-----HHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence            57899999999999999999999999999999998     333333333344488999999999988888764   7999


Q ss_pred             EEeCccc--------------cceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           80 ICTISGV--------------HFRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      +||||..              +.+++|+++..++.+...+    ......++.+||-.
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa  139 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA  139 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh
Confidence            9999842              3467888888777777433    33234677777644

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.22  E-value=2.2e-10  Score=78.39  Aligned_cols=115  Identities=17%  Similarity=0.170  Sum_probs=78.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH----HHHHhcc--cCE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS----LVEAVKR--VDV   78 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~~--~d~   78 (124)
                      =.+||||+.+||++.+++|+++|.+|++++|+++.++..+.+..+. .+-.+.++..|.++.+.    +.+.+++  +.+
T Consensus        51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~-~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK-YKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH-hCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            3689999999999999999999999999999984443333333322 22446788999988764    4444554  558


Q ss_pred             EEEeCcccc----------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|...                ....|..++..+.+..    .+.+ ...++.++|....
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~  191 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGL  191 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccc
Confidence            999998442                1235555554444444    4444 4678888876643

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.19  E-value=2.5e-10  Score=76.47  Aligned_cols=119  Identities=14%  Similarity=0.125  Sum_probs=81.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-C----eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHHh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-H----ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~----~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   73 (124)
                      |++|.++|||+++++|-+++..|++.. .    .+.+.+|+-+..+..-....+..++  -+++++..|+++-.++.++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            778889999999999999999998754 3    3344567763332222222222232  35779999999998877775


Q ss_pred             c-------ccCEEEEeCcccc-----------------------------------------ceecchHHHHHHHHHHHH
Q 033236           74 K-------RVDVVICTISGVH-----------------------------------------FRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        74 ~-------~~d~vi~~a~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~  105 (124)
                      +       ..|.++.|||...                                         .++.|+.|...+++.+++
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            4       4899999998431                                         246788888888877766


Q ss_pred             hC---CccEEEEecCCc
Q 033236          106 AG---NVKKRKLNEGMI  119 (124)
Q Consensus       106 ~~---~~~~~i~~ss~~  119 (124)
                      .-   ....+|++||..
T Consensus       161 ll~~~~~~~lvwtSS~~  177 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRM  177 (341)
T ss_pred             HhhcCCCCeEEEEeecc
Confidence            32   124788888654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=99.16  E-value=2.3e-10  Score=79.61  Aligned_cols=93  Identities=24%  Similarity=0.368  Sum_probs=70.2

Q ss_pred             eEEEEccCChhcHHHHHHHhh----CCCeEEEEeCCCCCCchHHHHHhhhhc--c----CCeEEEEcccCChHHHHHHhc
Q 033236            5 KVLVVGGTGYIGRRIVKASLA----QGHETYVLQRPDIGLDIDKLQMLLSFK--K----QGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~--~----~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      .++|.||+|++|..+++++.+    .+..+-+..|++    ....+.++...  .    +...++.+|.+|++++.+..+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~----~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE----KKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH----HHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh
Confidence            589999999999999999998    677888888997    22222222221  1    123388999999999999999


Q ss_pred             ccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           75 RVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        75 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ++.+|+||+||.+++.      ..++++|.++|
T Consensus        83 ~~~vivN~vGPyR~hG------E~VVkacienG  109 (423)
T KOG2733|consen   83 QARVIVNCVGPYRFHG------EPVVKACIENG  109 (423)
T ss_pred             hhEEEEeccccceecC------cHHHHHHHHcC
Confidence            9999999999887643      34555666665

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.14  E-value=6.6e-10  Score=77.56  Aligned_cols=109  Identities=17%  Similarity=0.051  Sum_probs=79.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++.|+|++|.+|..++..|...+  .++.+++++.  ......+...    ........+.+|+++..+.++++|+||
T Consensus         8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~----~~~~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSH----IDTPAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhh----cCcCceEEEecCCCchHHHhCCCCEEE
Confidence            5689999999999999999998665  6899999832  1111222211    111233455667666678999999999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +++|....        ...|...++++++++.+++ ++++++++|-
T Consensus        82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SN  126 (321)
T PTZ00325         82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSN  126 (321)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence            99986432        4568889999999999999 8899888753

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.08  E-value=9.8e-10  Score=73.65  Aligned_cols=106  Identities=19%  Similarity=0.209  Sum_probs=73.2

Q ss_pred             ccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc--------ccCE
Q 033236           10 GGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK--------RVDV   78 (124)
Q Consensus        10 Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--------~~d~   78 (124)
                      |++  ++||.++++.|+++|++|++++|++    +...+..+.+ ...+.+++++|++++++++++++        ++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~----~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNE----EKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSH----HHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  9999999999999999999999998    2211222222 12234579999999998888854        4799


Q ss_pred             EEEeCccccc------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           79 VICTISGVHF------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~~------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      +|||++....                  ++.|..+...+++++.+.- .-.++|++||..
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~  136 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA  136 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence            9999874421                  2345666666776664421 025788887654

...

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=1e-09  Score=76.13  Aligned_cols=35  Identities=20%  Similarity=0.072  Sum_probs=31.0

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      ++|+++|||++  .+||+++++.|+++|++|++.++.
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            46789999995  899999999999999999997654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.01  E-value=4.6e-09  Score=68.50  Aligned_cols=79  Identities=22%  Similarity=0.267  Sum_probs=60.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++++|+|++|.+|+.+++.|++.|++|+++.|+.    +......+.+. ..+.....+|..+.+++.++++++|+||
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi  102 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL----ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF  102 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence            457899999999999999999999999999999986    22222222221 1245566788889999999999999988


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      ++.+
T Consensus       103 ~at~  106 (194)
T cd01078         103 AAGA  106 (194)
T ss_pred             ECCC
Confidence            8664

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00106 malate dehydrogenase

Probab=98.96  E-value=7.6e-09  Score=72.37  Aligned_cols=108  Identities=17%  Similarity=0.057  Sum_probs=77.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ..||.|+|++|.+|..++..|...+  .++.++++++  +.....+..    +........++++.+++.+.++++|+||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~----~~~~~~~i~~~~~~~d~~~~l~~aDiVV   91 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVS----HINTPAQVRGFLGDDQLGDALKGADLVI   91 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhh----hCCcCceEEEEeCCCCHHHHcCCCCEEE
Confidence            3589999999999999999998766  5899999876  211122221    1111223335455666888999999999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      ++||....        ...|...++++.+.+.+.+ .+++++++|
T Consensus        92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvS  135 (323)
T PLN00106         92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIIS  135 (323)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeC
Confidence            99985422        3468889999999999998 677776663

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.96  E-value=7.3e-09  Score=73.62  Aligned_cols=82  Identities=20%  Similarity=0.193  Sum_probs=59.0

Q ss_pred             CceEEEEccCChhcHH--HHHHHhhCCCeEEEEeCCCCCCc----------h-HHHHHhhhhccCCeEEEEcccCChHHH
Q 033236            3 KSKVLVVGGTGYIGRR--IVKASLAQGHETYVLQRPDIGLD----------I-DKLQMLLSFKKQGAHLIEASFADHRSL   69 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~--l~~~l~~~g~~v~~~~r~~~~~~----------~-~~~~~~~~~~~~~~~~~~~D~~~~~~~   69 (124)
                      +|+++|||+++++|.+  +++.| +.|++++++++......          . ...+.... ....+..+.+|+++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-AGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence            4789999999999999  89999 99999888875431111          0 11112211 123466889999999988


Q ss_pred             HHHhc-------ccCEEEEeCccc
Q 033236           70 VEAVK-------RVDVVICTISGV   86 (124)
Q Consensus        70 ~~~~~-------~~d~vi~~a~~~   86 (124)
                      +++++       ++|++||+++..
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            88875       389999998743

>PRK09620 hypothetical protein; Provisional

Probab=98.95  E-value=3.7e-09  Score=70.69  Aligned_cols=83  Identities=23%  Similarity=0.303  Sum_probs=58.1

Q ss_pred             CCCceEEEEccC----------------ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGGT----------------GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga~----------------g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      |.+++++||+|.                |++|.+++++|+++|++|+++++..+...    ....  .......+.+|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~----~~~~--~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP----NDIN--NQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC----cccC--CceeEEEEecHHH
Confidence            678999999886                99999999999999999999886532110    0000  0122344566444


Q ss_pred             ChHHHHHHhc--ccCEEEEeCccccce
Q 033236           65 DHRSLVEAVK--RVDVVICTISGVHFR   89 (124)
Q Consensus        65 ~~~~~~~~~~--~~d~vi~~a~~~~~~   89 (124)
                      ..+.+.++++  ++|+|||+|+..+|.
T Consensus        75 ~~~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         75 LQDKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHhcccCCCEEEECcccccee
Confidence            4467788885  589999999876543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.94  E-value=9.5e-09  Score=68.78  Aligned_cols=73  Identities=25%  Similarity=0.308  Sum_probs=50.8

Q ss_pred             EEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHhcccCEEEEeC
Q 033236            7 LVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         7 li~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~a   83 (124)
                      .|++ ++|++|.++++.|+++|++|++++|+...         ......++.++.++..+  .+.+.+.++++|+|||+|
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~---------~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~A   89 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV---------KPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSM   89 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccc---------cCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCC
Confidence            3443 57899999999999999999999876410         01112356666654332  245666777899999999


Q ss_pred             ccccc
Q 033236           84 SGVHF   88 (124)
Q Consensus        84 ~~~~~   88 (124)
                      +...+
T Consensus        90 Avsd~   94 (229)
T PRK06732         90 AVSDY   94 (229)
T ss_pred             ccCCc
Confidence            97653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.93  E-value=2.6e-09  Score=67.98  Aligned_cols=95  Identities=15%  Similarity=0.177  Sum_probs=72.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VD   77 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d   77 (124)
                      ..+|||+.+++|++.++.|+++|..+.+++-.++.-.    +..++ -..++.+..+|+++++++..++..       .|
T Consensus        11 valvtggasglg~ataerlakqgasv~lldlp~skg~----~vake-lg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen   11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA----DVAKE-LGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch----HHHHH-hCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            4689999999999999999999999999988764332    11111 246788999999999999988753       79


Q ss_pred             EEEEeCcccc--------------------ceecchHHHHHHHHHHH
Q 033236           78 VVICTISGVH--------------------FRSHNILMQLKLVDAIR  104 (124)
Q Consensus        78 ~vi~~a~~~~--------------------~~~~~~~~~~~~~~~~~  104 (124)
                      +.+||+|..-                    ..++|+.|+.|+++...
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a  132 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA  132 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence            9999998431                    13567778877776553

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.91  E-value=2.2e-08  Score=68.00  Aligned_cols=90  Identities=24%  Similarity=0.292  Sum_probs=64.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++|+||||. |+.+++.|.+.|++|++..+++.+.        +.+...+...+..+..+.+++.+++.  ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~--------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK--------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc--------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence            57999999999 9999999999999999999987321        11122333345566678888988886  4999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+.|+.     ..-+.++.++|.+.+
T Consensus        72 AtHPfA-----~~is~~a~~a~~~~~   92 (256)
T TIGR00715        72 ATHPFA-----AQITTNATAVCKELG   92 (256)
T ss_pred             cCCHHH-----HHHHHHHHHHHHHhC
Confidence            887653     233445555555554

This enzyme was found to be a monomer by gel filtration.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.86  E-value=3.8e-08  Score=69.06  Aligned_cols=109  Identities=19%  Similarity=0.108  Sum_probs=70.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-------CeEEEEeCCCCC--CchHHHHHhhhhccCCeEEEEcccCChHHHHHHh
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-------HETYVLQRPDIG--LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      ..+++|+||+|++|++++..|+..+       .+++++++++..  ......+.    .+. ......|+....++.+.+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl----~d~-~~~~~~~~~~~~~~~~~l   76 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL----QDC-AFPLLKSVVATTDPEEAF   76 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh----hhc-cccccCCceecCCHHHHh
Confidence            4579999999999999999998744       589999987521  11000010    010 001123555456778888


Q ss_pred             cccCEEEEeCccccc--------eecchHHHHHHHHHHHHhC-CccEEEEec
Q 033236           74 KRVDVVICTISGVHF--------RSHNILMQLKLVDAIREAG-NVKKRKLNE  116 (124)
Q Consensus        74 ~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~i~~s  116 (124)
                      +++|+|||+||....        ...|..-...+.+.+.+.. +-..++.+|
T Consensus        77 ~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          77 KDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             CCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            999999999986432        3456666777878887774 222344444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.85  E-value=4.5e-08  Score=65.71  Aligned_cols=104  Identities=21%  Similarity=0.263  Sum_probs=83.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      |..+|||-+|.=|+.+++.|+.+||+|..+.|..+....++..++-..+    .......-+|++|.+.+.++++.  .+
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            4579999999999999999999999999999988776666666554432    23467889999999999999874  67


Q ss_pred             EEEEeCccccc----------eecchHHHHHHHHHHHHhC
Q 033236           78 VVICTISGVHF----------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        78 ~vi~~a~~~~~----------~~~~~~~~~~~~~~~~~~~  107 (124)
                      -|+|.|+..+.          -+++..|+.+++++....+
T Consensus       109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~  148 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR  148 (376)
T ss_pred             hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence            78888764321          2466789999999998876

>PRK05086 malate dehydrogenase; Provisional

Probab=98.84  E-value=3.2e-08  Score=69.06  Aligned_cols=107  Identities=18%  Similarity=0.111  Sum_probs=71.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhh-C--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLA-Q--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |+++|+||+|.+|++++..+.. .  ++++.+++|++. ......+..   ..+....+.+  .+.+++.+.++++|+||
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~---~~~~~~~i~~--~~~~d~~~~l~~~DiVI   74 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLS---HIPTAVKIKG--FSGEDPTPALEGADVVL   74 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceehhhh---cCCCCceEEE--eCCCCHHHHcCCCCEEE
Confidence            6899999999999999988854 2  468888888752 111111211   1121122333  22445566778899999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      .++|..+        ....|.....++++++.+.+ .++++.+.|
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT  118 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcc
Confidence            9998543        23457788999999999998 677776653

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.82  E-value=1.3e-07  Score=63.20  Aligned_cols=72  Identities=22%  Similarity=0.498  Sum_probs=60.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHH-hcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEA-VKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~-~~~~d~vi   80 (124)
                      |+++|.|+ |.+|..+++.|.+.|++|+++++++        +......  ......+.+|.++++.+.++ ++++|+++
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~--------~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE--------ERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH--------HHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEE
Confidence            57889985 9999999999999999999999998        3322322  25678999999999999999 78899999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      -..+
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            8887

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.81  E-value=2.1e-08  Score=67.31  Aligned_cols=90  Identities=17%  Similarity=0.086  Sum_probs=69.1

Q ss_pred             HHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEEEEeCcccc------c
Q 033236           19 IVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVVICTISGVH------F   88 (124)
Q Consensus        19 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~~~------~   88 (124)
                      +++.|+++|++|++++|+++..     .        ..+++++|++|.+++.++++    ++|++|||||...      .
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~-----~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~   67 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM-----T--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV   67 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh-----h--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence            4678999999999999987221     1        12468999999999999887    4899999998542      3


Q ss_pred             eecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           89 RSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      ++.|+.++..+++.+.+.- .-.++|++||...+
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~  101 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGA  101 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence            5788999999999987641 12589999976543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.81  E-value=2e-08  Score=69.59  Aligned_cols=77  Identities=18%  Similarity=0.229  Sum_probs=60.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      ..++|.||+||.|..++++|.++|.+-.+-.|++     .+.+.+.....+.  +-..++-+++.+....++.++|+||+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~-----~kl~~l~~~LG~~--~~~~p~~~p~~~~~~~~~~~VVlncv   79 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS-----AKLDALRASLGPE--AAVFPLGVPAALEAMASRTQVVLNCV   79 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCH-----HHHHHHHHhcCcc--ccccCCCCHHHHHHHHhcceEEEecc
Confidence            4689999999999999999999998887778987     4444443323333  44444445999999999999999999


Q ss_pred             cccc
Q 033236           84 SGVH   87 (124)
Q Consensus        84 ~~~~   87 (124)
                      ||..
T Consensus        80 GPyt   83 (382)
T COG3268          80 GPYT   83 (382)
T ss_pred             cccc
Confidence            9764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.80  E-value=3.3e-08  Score=68.31  Aligned_cols=81  Identities=15%  Similarity=0.120  Sum_probs=58.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      ++++++|+|+ |++|++++..|++.|++ |+++.|++...+. ..+..+.+.  ...+.+..+|+.+.+++.+.++.+|+
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~-a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYER-AEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHH-HHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            3578999998 89999999999999975 9999998621111 111222222  12345667899888888888889999


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      +||+.+
T Consensus       203 lINaTp  208 (289)
T PRK12548        203 LVNATL  208 (289)
T ss_pred             EEEeCC
Confidence            999875

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.78  E-value=3.7e-08  Score=70.77  Aligned_cols=75  Identities=17%  Similarity=0.378  Sum_probs=58.3

Q ss_pred             CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      |.+++++||||                +|.+|.+++++|.++|++|++++++.+.      +     ...+  +...|++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~------~-----~~~~--~~~~dv~  252 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL------P-----TPAG--VKRIDVE  252 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc------c-----CCCC--cEEEccC
Confidence            45789999999                7889999999999999999999887510      0     0112  3467999


Q ss_pred             ChHHHHHHhc----ccCEEEEeCccccc
Q 033236           65 DHRSLVEAVK----RVDVVICTISGVHF   88 (124)
Q Consensus        65 ~~~~~~~~~~----~~d~vi~~a~~~~~   88 (124)
                      +.+++.++++    ++|++||+||..++
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEccccccc
Confidence            9888877764    58999999986543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=98.70  E-value=1e-06  Score=52.67  Aligned_cols=92  Identities=22%  Similarity=0.305  Sum_probs=66.9

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEeCc
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICTIS   84 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   84 (124)
                      ++|.|. |.+|+.+++.|.+.+++|+++++++        +..+.....++.++.+|.++++.++++ +++++.++.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~--------~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP--------ERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH--------HHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc--------HHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578885 8999999999999778999999997        333344456688999999999999998 678998888776


Q ss_pred             cccceecchHHHHHHHHHHHHhCCccEEE
Q 033236           85 GVHFRSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                             +-.....++..+++.++..+++
T Consensus        72 -------~d~~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   72 -------DDEENLLIALLARELNPDIRII   93 (116)
T ss_dssp             -------SHHHHHHHHHHHHHHTTTSEEE
T ss_pred             -------CHHHHHHHHHHHHHHCCCCeEE
Confidence                   2233445556666544223444

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.68  E-value=3.9e-08  Score=65.18  Aligned_cols=92  Identities=28%  Similarity=0.361  Sum_probs=69.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      +++|+|+|++|-+|+++.+.+.+.|.  +=.++.                      ..-.+|+++.++.+++|+.  ..+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~----------------------~skd~DLt~~a~t~~lF~~ekPth   58 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI----------------------GSKDADLTNLADTRALFESEKPTH   58 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe----------------------ccccccccchHHHHHHHhccCCce
Confidence            37899999999999999999887764  111111                      1225799999999999974  789


Q ss_pred             EEEeCccc-----------cceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           79 VICTISGV-----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        79 vi~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |||.|+-+           .+...|..-.-|++..+.+.| +++++++-|
T Consensus        59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclS  107 (315)
T KOG1431|consen   59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLS  107 (315)
T ss_pred             eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcc
Confidence            99988632           345677777889999999999 777776553

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.60  E-value=2.8e-07  Score=65.92  Aligned_cols=97  Identities=20%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi   80 (124)
                      ++++.|.||+|++|+.+++.|.++ ..++..+.+.++..     +..   ..........|..+.++++.. ++++|+||
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-----~~i---~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-----QSF---GSVFPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-----CCc---hhhCccccCccccceecCCHHHhcCCCEEE
Confidence            468999999999999999999988 57998888764211     110   111111222343333333322 57899999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      .+.+.        ....++++.+ +.+  .++|-.|+.
T Consensus       110 ~Alp~--------~~s~~i~~~~-~~g--~~VIDlSs~  136 (381)
T PLN02968        110 CCLPH--------GTTQEIIKAL-PKD--LKIVDLSAD  136 (381)
T ss_pred             EcCCH--------HHHHHHHHHH-hCC--CEEEEcCch
Confidence            98872        3567777776 455  578877754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.60  E-value=8.5e-07  Score=58.86  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=62.6

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cC-CeEEEEcccCChHHHHHHhcc-
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQ-GAHLIEASFADHRSLVEAVKR-   75 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~-   75 (124)
                      |++|+.+|+|-.  ..|+..+++.|.++|.++.....++     ...++.+++. .. ...+++||+++.++++++|+. 
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence            578999999943  7899999999999999999988876     2223333332 22 245899999999999999864 


Q ss_pred             ------cCEEEEeCccc
Q 033236           76 ------VDVVICTISGV   86 (124)
Q Consensus        76 ------~d~vi~~a~~~   86 (124)
                            +|.++|+.+..
T Consensus        79 ~~~~g~lD~lVHsIaFa   95 (259)
T COG0623          79 KKKWGKLDGLVHSIAFA   95 (259)
T ss_pred             HHhhCcccEEEEEeccC
Confidence                  89999998743

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.54  E-value=1.8e-06  Score=62.86  Aligned_cols=72  Identities=17%  Similarity=0.331  Sum_probs=60.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      |+++|.|+ |.+|+.+++.|.+.|++|+++++++        +..+... ..+++++.+|.++++.+.++ ++++|.++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~--------~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~   71 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE--------ERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIA   71 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence            57999996 9999999999999999999999987        2222222 25688999999999999998 888999988


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus        72 ~~~   74 (453)
T PRK09496         72 VTD   74 (453)
T ss_pred             ecC
Confidence            775

>cd00704 MDH Malate dehydrogenase

Probab=98.54  E-value=1.2e-06  Score=61.43  Aligned_cols=98  Identities=19%  Similarity=0.141  Sum_probs=65.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-C------eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-----------
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-H------ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-----------   66 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------   66 (124)
                      ++.|+||+|.+|..++..|...+ .      ++.++++++..              ...+....|+.+.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence            68999999999999999998765 2      58888887510              0111222222222           


Q ss_pred             HHHHHHhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236           67 RSLVEAVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREA-GNVKKRKLNE  116 (124)
Q Consensus        67 ~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s  116 (124)
                      ....+.++++|+||+.||..+        ....|..-.+.+.+.+.+. ++-..++.+|
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            345678889999999998542        2345777788888888888 4323445554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.53  E-value=9.9e-07  Score=54.45  Aligned_cols=75  Identities=24%  Similarity=0.293  Sum_probs=53.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|.|+ |+.|+.++..|...|.+ |+++.|+.    +...+..+.+....+.++..     +++.+...++|+||
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~----~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI   80 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP----ERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVI   80 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH----HHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH----HHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEE
Confidence            4689999996 99999999999999964 99999987    33334444443445555554     33447777899999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      ++.+..
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            987643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.53  E-value=1.5e-06  Score=68.74  Aligned_cols=76  Identities=22%  Similarity=0.264  Sum_probs=57.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-Ce-------------EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HE-------------TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS   68 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   68 (124)
                      +++|+|.|+ |.+|+..++.|.+.+ .+             |.+.+++.    ....+....  .++++.+..|++|.++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~----~~a~~la~~--~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL----KDAKETVEG--IENAEAVQLDVSDSES  641 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH----HHHHHHHHh--cCCCceEEeecCCHHH
Confidence            468999996 999999999998753 33             66666665    122222211  2367889999999999


Q ss_pred             HHHHhcccCEEEEeCcc
Q 033236           69 LVEAVKRVDVVICTISG   85 (124)
Q Consensus        69 ~~~~~~~~d~vi~~a~~   85 (124)
                      +.++++++|+|+++.++
T Consensus       642 L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHhhcCCCEEEECCCc
Confidence            99999999999999874

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.51  E-value=1.5e-06  Score=54.13  Aligned_cols=106  Identities=17%  Similarity=0.191  Sum_probs=68.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCC--eEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQG--AHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ||+.|+|++|.+|.+++..|...+  .++.++++++........+.........  ..+..   .+.    +.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence            689999999999999999999887  6899999986322222222221111222  22222   223    345679999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +..+|..+        ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99998542        23567777888888888887323444444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=98.47  E-value=7e-06  Score=58.03  Aligned_cols=104  Identities=19%  Similarity=0.223  Sum_probs=69.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC--------------------CchHHHHHhhhhc-cCCeEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG--------------------LDIDKLQMLLSFK-KQGAHLI   59 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~--------------------~~~~~~~~~~~~~-~~~~~~~   59 (124)
                      +.++|+|.|+ |++|.++++.|++.|. ++++++++.-+                    ......+.+..+. .-.++.+
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            3568999995 9999999999999996 88888887411                    1111123333332 2346677


Q ss_pred             EcccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           60 EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        60 ~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ..|++ ++.+.++++++|+||.+...       ...-..+-+.|.+.+ + .+|+.+
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~D~-------~~~r~~in~~~~~~~-i-p~i~~~  148 (338)
T PRK12475        102 VTDVT-VEELEELVKEVDLIIDATDN-------FDTRLLINDLSQKYN-I-PWIYGG  148 (338)
T ss_pred             eccCC-HHHHHHHhcCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            77775 56788889999999998752       233344667777777 3 455544

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=98.44  E-value=9.1e-06  Score=57.47  Aligned_cols=104  Identities=18%  Similarity=0.264  Sum_probs=69.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC--------------------CchHHHHHhhhhc-cCCeEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG--------------------LDIDKLQMLLSFK-KQGAHLI   59 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~--------------------~~~~~~~~~~~~~-~~~~~~~   59 (124)
                      +..+|+|.|+ |++|..++..|+..|. ++++++.+.-+                    ......+.+..+. .-.++.+
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~  101 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI  101 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            3568999996 9999999999999996 88999876310                    1111112222222 2235666


Q ss_pred             EcccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           60 EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        60 ~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ..+++ ++.+.+++++.|+|+.+..       |...-..+-+.|.+.+ + .+|+.+
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~D-------n~~~r~~ln~~~~~~~-i-P~i~~~  148 (339)
T PRK07688        102 VQDVT-AEELEELVTGVDLIIDATD-------NFETRFIVNDAAQKYG-I-PWIYGA  148 (339)
T ss_pred             eccCC-HHHHHHHHcCCCEEEEcCC-------CHHHHHHHHHHHHHhC-C-CEEEEe
Confidence            66764 5667788999999998865       3444456778888887 3 455544

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.44  E-value=3.1e-06  Score=59.75  Aligned_cols=92  Identities=23%  Similarity=0.253  Sum_probs=58.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++++.|.||+|++|+.+++.|.++++   ++..+.+.++..+.     . .+.  +.+....|+.+.     .++++|+|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-----l-~~~--g~~i~v~d~~~~-----~~~~vDvV   67 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-----L-SFK--GKELKVEDLTTF-----DFSGVDIA   67 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-----e-eeC--CceeEEeeCCHH-----HHcCCCEE
Confidence            36899999999999999999999775   44667665422111     1 011  223444455432     23689999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |.+.|        .......++...+.| + .+|-.|+
T Consensus        68 f~A~g--------~g~s~~~~~~~~~~G-~-~VIDlS~   95 (334)
T PRK14874         68 LFSAG--------GSVSKKYAPKAAAAG-A-VVIDNSS   95 (334)
T ss_pred             EECCC--------hHHHHHHHHHHHhCC-C-EEEECCc
Confidence            99887        223556666666677 3 5665554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.43  E-value=1.5e-06  Score=62.35  Aligned_cols=75  Identities=20%  Similarity=0.385  Sum_probs=55.8

Q ss_pred             CCCceEEEEcc---------------C-ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGG---------------T-GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga---------------~-g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      |.+++++||||               + |.+|.++++++...|++|+++.++.+..           ....  +...|++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~--~~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPG--VKSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCC--cEEEEec
Confidence            45789999998               2 5699999999999999999988765110           1122  3567888


Q ss_pred             ChHHH-HHHh----cccCEEEEeCccccc
Q 033236           65 DHRSL-VEAV----KRVDVVICTISGVHF   88 (124)
Q Consensus        65 ~~~~~-~~~~----~~~d~vi~~a~~~~~   88 (124)
                      +.+++ ..++    .++|++|++|+..++
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVADF  278 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEccccccc
Confidence            88887 5444    358999999997644

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.41  E-value=1.1e-06  Score=61.85  Aligned_cols=72  Identities=33%  Similarity=0.409  Sum_probs=50.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++++|+||+|.+|+.+++.|+++ | .+++++.|+.     .+...+..      ++..+|+   .++.+++.++|+|
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~-----~rl~~La~------el~~~~i---~~l~~~l~~aDiV  219 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ-----ERLQELQA------ELGGGKI---LSLEEALPEADIV  219 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH-----HHHHHHHH------HhccccH---HhHHHHHccCCEE
Confidence            4689999999999999999999864 5 6889988876     11221111      1112333   3466888899999


Q ss_pred             EEeCcccc
Q 033236           80 ICTISGVH   87 (124)
Q Consensus        80 i~~a~~~~   87 (124)
                      +++++...
T Consensus       220 v~~ts~~~  227 (340)
T PRK14982        220 VWVASMPK  227 (340)
T ss_pred             EECCcCCc
Confidence            99998543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.40  E-value=2.7e-06  Score=62.01  Aligned_cols=76  Identities=21%  Similarity=0.265  Sum_probs=55.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++++++|+|+++ +|..+++.|++.|++|++++++....   ..+....+...++.++.+|..+     ....++|+||
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~---~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv   73 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ---LKEALEELGELGIELVLGEYPE-----EFLEGVDLVV   73 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEE
Confidence            3468999999755 99999999999999999998875211   1111222334467788888765     3345799999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      +++|.
T Consensus        74 ~~~g~   78 (450)
T PRK14106         74 VSPGV   78 (450)
T ss_pred             ECCCC
Confidence            99884

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.40  E-value=4.2e-06  Score=58.84  Aligned_cols=98  Identities=18%  Similarity=0.077  Sum_probs=65.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-C------eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH----------
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-H------ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR----------   67 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------   67 (124)
                      ++.|+|++|.+|..++..|...+ .      ++.++++++..              ...+....|+.|..          
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            58999999999999999998755 2      58899886521              01222233333322          


Q ss_pred             -HHHHHhcccCEEEEeCccccc--------eecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236           68 -SLVEAVKRVDVVICTISGVHF--------RSHNILMQLKLVDAIREA-GNVKKRKLNE  116 (124)
Q Consensus        68 -~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~i~~s  116 (124)
                       +..+.++++|+||++||...-        ...|..-.+.+.+.+.+. ++-..++.+|
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence             345678899999999985321        235677778888888887 3323444544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=98.39  E-value=6.6e-06  Score=61.71  Aligned_cols=72  Identities=19%  Similarity=0.286  Sum_probs=59.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      .+++|.| .|.+|+.+++.|.++|++++++++++        ++.+...+.+..++.+|.+|++.++++ .+++|.++-+
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~--------~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSR--------TRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            4688888 59999999999999999999999987        233333346788999999999999987 5789988776


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus       489 ~~  490 (558)
T PRK10669        489 IP  490 (558)
T ss_pred             cC
Confidence            54

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=98.39  E-value=3.5e-06  Score=59.66  Aligned_cols=98  Identities=18%  Similarity=0.178  Sum_probs=60.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEE-EEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHL-IEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++.|.||+|++|+.+++.|.+. +.++.++.++.+..     +..... .+.+.. ...++.+.+..  ..+++|+|+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g-----~~l~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG-----KPLSDV-HPHLRGLVDLVLEPLDPE--ILAGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC-----cchHHh-CcccccccCceeecCCHH--HhcCCCEEE
Confidence            378999999999999999999886 57887776643111     001000 011111 12233333332  456799999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      .|.+.        ....+++..+.+.|  .++|-.|+.
T Consensus        74 ~alP~--------~~~~~~v~~a~~aG--~~VID~S~~  101 (343)
T PRK00436         74 LALPH--------GVSMDLAPQLLEAG--VKVIDLSAD  101 (343)
T ss_pred             ECCCc--------HHHHHHHHHHHhCC--CEEEECCcc
Confidence            98863        23456777777777  577777743

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.37  E-value=2.6e-05  Score=47.16  Aligned_cols=96  Identities=25%  Similarity=0.325  Sum_probs=57.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEE-eCCC-CCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVL-QRPD-IGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~-~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++.|.||+|++|+.+++.|.+.. .++..+ .+++ .+..  .....+.  .....-+..+-.+.+.+    +++|+||.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~--~~~~~~~--~~~~~~~~~~~~~~~~~----~~~Dvvf~   72 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKP--LSEVFPH--PKGFEDLSVEDADPEEL----SDVDVVFL   72 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSB--HHHTTGG--GTTTEEEBEEETSGHHH----TTESEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCe--eehhccc--cccccceeEeecchhHh----hcCCEEEe
Confidence            68999999999999999999865 565544 4444 1111  1111111  11222221111344444    78999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |.+        ......+.+.+.+.| + ++|-.|+.
T Consensus        73 a~~--------~~~~~~~~~~~~~~g-~-~ViD~s~~   99 (121)
T PF01118_consen   73 ALP--------HGASKELAPKLLKAG-I-KVIDLSGD   99 (121)
T ss_dssp             -SC--------HHHHHHHHHHHHHTT-S-EEEESSST
T ss_pred             cCc--------hhHHHHHHHHHhhCC-c-EEEeCCHH
Confidence            987        334567788888888 3 67766644

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.37  E-value=1.3e-05  Score=58.50  Aligned_cols=99  Identities=21%  Similarity=0.269  Sum_probs=69.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      +++++|.|+ |.+|+.+++.|.+.|++|+++++++     +..+.... ...++.++.+|.++++.+.++ ++++|.++.
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~-----~~~~~~~~-~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP-----ERAEELAE-ELPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH-----HHHHHHHH-HCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            478999996 9999999999999999999999987     22222211 123577999999999999776 578999887


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +.+..   ..|.    .+...+++.+ ..+++...
T Consensus       304 ~~~~~---~~n~----~~~~~~~~~~-~~~ii~~~  330 (453)
T PRK09496        304 LTNDD---EANI----LSSLLAKRLG-AKKVIALV  330 (453)
T ss_pred             CCCCc---HHHH----HHHHHHHHhC-CCeEEEEE
Confidence            66521   2333    2333445555 45555443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=98.36  E-value=8e-06  Score=61.80  Aligned_cols=88  Identities=19%  Similarity=0.240  Sum_probs=68.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      ++++|.| .|.+|+.+++.|.++|++++++++++        +..+.....+..++.+|.++++.++++ ++++|.++.+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDI--------SAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            5788888 59999999999999999999999997        333333346788999999999999998 6789998887


Q ss_pred             CccccceecchHHHHHHHHHHHHhC
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+.       ......+++.+++.+
T Consensus       472 ~~d-------~~~n~~i~~~~r~~~  489 (601)
T PRK03659        472 CNE-------PEDTMKIVELCQQHF  489 (601)
T ss_pred             eCC-------HHHHHHHHHHHHHHC
Confidence            652       233445666666655

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=98.31  E-value=1.7e-05  Score=57.52  Aligned_cols=36  Identities=22%  Similarity=0.317  Sum_probs=33.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |..|++.|.| .|++|..++..|++.|++|+++++++
T Consensus         1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCH
Confidence            6778999998 59999999999999999999999987

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.29  E-value=7e-06  Score=57.37  Aligned_cols=112  Identities=21%  Similarity=0.226  Sum_probs=66.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCC--CCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPD--IGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++.|+|++|.+|..++..|+..|.  +|++++|++  ........+..+.....+... ....+  .+.. .++++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~~-~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDLS-DVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCHH-HhCCCCEE
Confidence            6899999999999999999999985  599999854  112112222211111111111 11111  1233 48899999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      |.++|...        ....|..-.+.+++.+.+.++-..++..++-.
T Consensus        77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            99998432        12345566777777777776323555555433

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.29  E-value=7.7e-06  Score=53.13  Aligned_cols=78  Identities=22%  Similarity=0.408  Sum_probs=47.9

Q ss_pred             CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      +.+++++||+|                +|..|.++++++..+|++|+++....+-         +  .+.+++.+...-.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~---------~--~p~~~~~i~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL---------P--PPPGVKVIRVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc---------c--ccccceEEEecch
Confidence            35677777765                6899999999999999999999876410         0  1346777765432


Q ss_pred             Ch--HHHHHHhcccCEEEEeCccccce
Q 033236           65 DH--RSLVEAVKRVDVVICTISGVHFR   89 (124)
Q Consensus        65 ~~--~~~~~~~~~~d~vi~~a~~~~~~   89 (124)
                      +.  +.+.+.+++.|++|++|+..+|.
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhhhhhccccCcceeEEEecchhhee
Confidence            21  34444556689999999877653

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.28  E-value=1.5e-06  Score=58.19  Aligned_cols=66  Identities=18%  Similarity=0.275  Sum_probs=47.2

Q ss_pred             EEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------ccCE
Q 033236            7 LVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RVDV   78 (124)
Q Consensus         7 li~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   78 (124)
                      .|+. ++|++|.++++.|+++|++|+++++...         ..   ..  ....+|+.+.+++.++++       ++|+
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~---------l~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA---------LK---PE--PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh---------cc---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            4555 4799999999999999999999876320         00   00  123578888877766543       4899


Q ss_pred             EEEeCccc
Q 033236           79 VICTISGV   86 (124)
Q Consensus        79 vi~~a~~~   86 (124)
                      +|||||..
T Consensus        84 LVnnAgv~   91 (227)
T TIGR02114        84 LIHSMAVS   91 (227)
T ss_pred             EEECCEec
Confidence            99999854

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=98.28  E-value=2.1e-05  Score=47.90  Aligned_cols=97  Identities=23%  Similarity=0.176  Sum_probs=55.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhh-CCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLA-QGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |++.|.|++|..|+.+++.+.+ .+.++... +|+++....+...........+       +.-.+++.++++.+|++|-
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~-------~~v~~~l~~~~~~~DVvID   73 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLG-------VPVTDDLEELLEEADVVID   73 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-S-------SBEBS-HHHHTTH-SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcc-------cccchhHHHhcccCCEEEE
Confidence            5899999999999999999998 67887554 5555222111111111111111       1122667777777888887


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +..        .......++.+.+.+ +.-++-++
T Consensus        74 fT~--------p~~~~~~~~~~~~~g-~~~ViGTT   99 (124)
T PF01113_consen   74 FTN--------PDAVYDNLEYALKHG-VPLVIGTT   99 (124)
T ss_dssp             ES---------HHHHHHHHHHHHHHT--EEEEE-S
T ss_pred             cCC--------hHHhHHHHHHHHhCC-CCEEEECC
Confidence            664        344566777777777 44444333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK04148 hypothetical protein; Provisional

Probab=98.25  E-value=5.5e-05  Score=46.54  Aligned_cols=90  Identities=14%  Similarity=0.175  Sum_probs=65.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++++..|. | .|..++..|.+.|++|++++.++     .   ..+......+.++.+|+.+++  -+..+++|.++.+
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~-----~---aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINE-----K---AVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCH-----H---HHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence            467999984 6 89999999999999999999998     2   222223456789999999876  3456678988777


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEE
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKR  112 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (124)
                      -.+       .+-...+++-+.+.+ +.-+
T Consensus        85 rpp-------~el~~~~~~la~~~~-~~~~  106 (134)
T PRK04148         85 RPP-------RDLQPFILELAKKIN-VPLI  106 (134)
T ss_pred             CCC-------HHHHHHHHHHHHHcC-CCEE
Confidence            654       333556777777776 4433

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.24  E-value=3.5e-06  Score=58.77  Aligned_cols=33  Identities=27%  Similarity=0.438  Sum_probs=30.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++.|+| .|.+|..++..|++.|++|++.+|++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            5799999 69999999999999999999999987

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.23  E-value=1.5e-05  Score=56.67  Aligned_cols=37  Identities=32%  Similarity=0.448  Sum_probs=31.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      ||++++.|+||+|++|+.+++.|.+.. .++..+.+++
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            778899999999999999999999876 5888875554

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.22  E-value=5.8e-06  Score=53.70  Aligned_cols=108  Identities=19%  Similarity=0.307  Sum_probs=56.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-------------ccCChHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-------------SFADHRSLV   70 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------D~~~~~~~~   70 (124)
                      |+|.|.| .|++|..++..|++.|++|++++.++     .+.+   .+......+.+-             .+.-..+..
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~-----~~v~---~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~   71 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDE-----EKVE---ALNNGELPIYEPGLDELLKENVSAGRLRATTDIE   71 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H-----HHHH---HHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCCh-----HHHH---HHhhccccccccchhhhhccccccccchhhhhhh
Confidence            6899998 69999999999999999999999987     2222   222111111111             111112334


Q ss_pred             HHhcccCEEEEeCcccc--ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           71 EAVKRVDVVICTISGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        71 ~~~~~~d~vi~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      .+.+++|++|.|.+...  ....+.......++.+.+.-+...++.+-|+.+
T Consensus        72 ~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvp  123 (185)
T PF03721_consen   72 EAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVP  123 (185)
T ss_dssp             HHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSS
T ss_pred             hhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEE
Confidence            44556899999987322  223455556666666655421235655555543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=98.21  E-value=7.4e-05  Score=45.97  Aligned_cols=103  Identities=19%  Similarity=0.241  Sum_probs=68.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCC--------C----------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDI--------G----------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~--------~----------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      .++++|.|+ |++|..+++.|+..|. ++++++.+.-        .          ..+...+.+.... .-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467999985 9999999999999995 7888886620        0          1111112222222 3346677777


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      + +.+...++++++|+||.+...       ...-..+.+.|.+.+  .++|+.+
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-------~~~~~~l~~~~~~~~--~p~i~~~  124 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-------LAARLLLNEICREYG--IPFIDAG  124 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-------HHHHHHHHHHHHHTT---EEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCC-------HHHHHHHHHHHHHcC--CCEEEEE
Confidence            7 567788888999999998762       344456777888887  3666665

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=98.21  E-value=4.8e-05  Score=50.09  Aligned_cols=104  Identities=16%  Similarity=0.164  Sum_probs=65.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCC------------------chHHHHHhhhhc-cCCeEEEEc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGL------------------DIDKLQMLLSFK-KQGAHLIEA   61 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~------------------~~~~~~~~~~~~-~~~~~~~~~   61 (124)
                      .+.+++|.| .|++|..+++.|+..|. ++++++.+.-+.                  .....+.+..+. .-.++.+..
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~   98 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE   98 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence            356899998 59999999999999995 889988773110                  011112222221 123444444


Q ss_pred             ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ +.+.+.+.+++.|+||.+...       ...-..+-+.|.+.+ . .+++.+
T Consensus        99 ~i-~~~~~~~~~~~~D~Vi~~~d~-------~~~r~~l~~~~~~~~-i-p~i~~~  143 (202)
T TIGR02356        99 RV-TAENLELLINNVDLVLDCTDN-------FATRYLINDACVALG-T-PLISAA  143 (202)
T ss_pred             cC-CHHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            44 346677888999999988752       333445667777776 3 455544

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=98.19  E-value=7.8e-05  Score=49.47  Aligned_cols=103  Identities=21%  Similarity=0.202  Sum_probs=65.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC---CC--------------CchHHHHHhhhhc-cCCeEEEEccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD---IG--------------LDIDKLQMLLSFK-KQGAHLIEASF   63 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~---~~--------------~~~~~~~~~~~~~-~~~~~~~~~D~   63 (124)
                      ..+++|.|+ |++|..+++.|++.|. ++++++.+.   +.              ..+...+.+..+. .-.++.+...+
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i  106 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI  106 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence            567999995 9999999999999995 688888772   11              0111112222221 22455555555


Q ss_pred             CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236           64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREA-GNVKKRKLNE  116 (124)
Q Consensus        64 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s  116 (124)
                      ++ +.+.+.++++|+||.+..       |...-..+.+.+.+. +  ..+|+.+
T Consensus       107 ~~-~~~~~~~~~~DvVI~a~D-------~~~~r~~l~~~~~~~~~--~p~I~~~  150 (212)
T PRK08644        107 DE-DNIEELFKDCDIVVEAFD-------NAETKAMLVETVLEHPG--KKLVAAS  150 (212)
T ss_pred             CH-HHHHHHHcCCCEEEECCC-------CHHHHHHHHHHHHHhCC--CCEEEee
Confidence            44 567788899999998853       333344566777777 6  3455543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=98.19  E-value=3e-05  Score=58.98  Aligned_cols=72  Identities=21%  Similarity=0.332  Sum_probs=59.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      ++++|.|. |.+|+.+++.|.++|+++++++.++        +..+.....+..++.+|.++++.++++ +++++.++.+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDP--------DHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            57889984 9999999999999999999999998        333333345788999999999999987 5789988887


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus       472 ~~  473 (621)
T PRK03562        472 ID  473 (621)
T ss_pred             eC
Confidence            65

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.18  E-value=2.1e-06  Score=56.89  Aligned_cols=113  Identities=15%  Similarity=0.135  Sum_probs=67.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEE--eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVL--QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++.+++||++.+||..++..+..++.+....  .|...+.     +.+..-.........+|.++...+..+++      
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~-----~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAEL-----EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccc-----cceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            4568999999999999999888877544333  3333110     11100011233455566666665555554      


Q ss_pred             -ccCEEEEeCccc-----------------cceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGV-----------------HFRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~-----------------~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                       +.|.+|||||..                 ++++.|..+...+.+.+.+    ....+-++++||...
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa  148 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA  148 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh
Confidence             279999999843                 2355666666665555543    211256788887654

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.16  E-value=2.8e-05  Score=54.92  Aligned_cols=94  Identities=17%  Similarity=0.223  Sum_probs=55.3

Q ss_pred             CCC-ceEEEEccCChhcHHHHHHHhhCCCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MGK-SKVLVVGGTGYIGRRIVKASLAQGHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~~-~~ili~Ga~g~iG~~l~~~l~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |++ +++.|+||+|++|+.+++.|.++++.   +..+....+.     .+..   ...+   ...++.+.+...  ++++
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-----G~~l---~~~~---~~l~~~~~~~~~--~~~v   67 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-----GHSV---PFAG---KNLRVREVDSFD--FSQV   67 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-----CCee---ccCC---cceEEeeCChHH--hcCC
Confidence            443 68999999999999999999976643   3334332210     0111   1111   123333333222  4789


Q ss_pred             CEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           77 DVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        77 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |++|.+.+.        .....+++.+.+.| + ++|-.|+
T Consensus        68 D~vFla~p~--------~~s~~~v~~~~~~G-~-~VIDlS~   98 (336)
T PRK05671         68 QLAFFAAGA--------AVSRSFAEKARAAG-C-SVIDLSG   98 (336)
T ss_pred             CEEEEcCCH--------HHHHHHHHHHHHCC-C-eEEECch
Confidence            999998862        22345777777777 3 5666654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.16  E-value=2.3e-06  Score=56.98  Aligned_cols=37  Identities=27%  Similarity=0.647  Sum_probs=32.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG   39 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~   39 (124)
                      .++..++|++||+|.++++.+...||.+.-+.|+.-+
T Consensus         2 i~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas   38 (283)
T KOG4288|consen    2 IPKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGAS   38 (283)
T ss_pred             CccceeecccccchhhhhHHHHhcCceEEEeccccCC
Confidence            4678899999999999999999999999999888633

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.15  E-value=1.7e-05  Score=49.62  Aligned_cols=74  Identities=23%  Similarity=0.289  Sum_probs=48.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |.+|..+++.|.+.| ++|++.+|++    +...+..+......   +..+..+.   .++.+++|+|+
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~----~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~Dvvi   86 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL----EKAKALAERFGELG---IAIAYLDL---EELLAEADLII   86 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH----HHHHHHHHHHhhcc---cceeecch---hhccccCCEEE
Confidence            3578999996 999999999999986 8899999986    22222222211111   22233333   33478899999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      ++.++.
T Consensus        87 ~~~~~~   92 (155)
T cd01065          87 NTTPVG   92 (155)
T ss_pred             eCcCCC
Confidence            998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=98.14  E-value=0.00017  Score=47.50  Aligned_cols=106  Identities=14%  Similarity=0.124  Sum_probs=64.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCC---CCCCchH--------------HHHHhhhhc-cCCeEEEEcc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRP---DIGLDID--------------KLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~---~~~~~~~--------------~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.++++|.|+ |++|+.++..|++.|. ++++++++   .+....+              ..+.+..+. .-.++.+..+
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~   98 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK   98 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence            3568999995 9999999999999997 69998887   2211110              111222221 1245555566


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ .+.+.++++++|+||-+..       |...-..+.+.+.+.-+...++..+
T Consensus        99 i~-~~~~~~~~~~~DlVi~a~D-------n~~~k~~l~~~~~~~~~~~~ii~~~  144 (200)
T TIGR02354        99 IT-EENIDKFFKDADIVCEAFD-------NAEAKAMLVNAVLEKYKDKYLIAAS  144 (200)
T ss_pred             CC-HhHHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            64 5678888999999998742       2333344556665543123444433

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.14  E-value=0.00012  Score=51.31  Aligned_cols=106  Identities=18%  Similarity=0.234  Sum_probs=67.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++|+.|+|+ |.+|..++..|+..|.  ++.+++++.........+....... .++.+...   +   . +.++++|+|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCEE
Confidence            358999997 9999999999998884  8999999774433333333322111 22223221   2   2 346789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |..+|..+        ..+.|..-.+.+++.+.+.++-..++..|
T Consensus        78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99998532        23456777788888888876322344443

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.11  E-value=8.7e-05  Score=51.81  Aligned_cols=105  Identities=17%  Similarity=0.242  Sum_probs=66.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++.|.|+ |.+|+.++..|+..|  .++.++++++...+....+.....  ..........   +.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---DYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---CHH----HhCCCCEE
Confidence            47899995 999999999999998  689999998743322222221111  1122223222   222    35789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+++|..+        ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99998532        23456666778888888876322344443

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=98.10  E-value=3.2e-05  Score=54.77  Aligned_cols=90  Identities=17%  Similarity=0.234  Sum_probs=55.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeE---EEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHET---YVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++.|.||+|++|+.+++.|.++++++   ..+.+.++..     +   .+...+......|+. .    ..++++|++|.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-----~---~~~~~~~~~~~~~~~-~----~~~~~~D~v~~   67 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-----R---KVTFKGKELEVNEAK-I----ESFEGIDIALF   67 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-----C---eeeeCCeeEEEEeCC-h----HHhcCCCEEEE
Confidence            57899999999999999999877654   3344544111     0   111122345555553 1    23478999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      ++|.        ......++.+.+.| + ++|-.|+
T Consensus        68 a~g~--------~~s~~~a~~~~~~G-~-~VID~ss   93 (339)
T TIGR01296        68 SAGG--------SVSKEFAPKAAKCG-A-IVIDNTS   93 (339)
T ss_pred             CCCH--------HHHHHHHHHHHHCC-C-EEEECCH
Confidence            9982        23455666666667 3 4554443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.09  E-value=8.3e-05  Score=49.48  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=31.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|+|++|.+|..++..|.+.|++|.+.+|++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            5799999889999999999999999999998887

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=98.08  E-value=3e-05  Score=55.04  Aligned_cols=98  Identities=18%  Similarity=0.177  Sum_probs=57.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEE-EcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLI-EASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++.|.||+|++|..+++.|.+. +.++..+ +++++..+ ...+..     +.+... ..++.+. +..++.+++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk-~~~~~~-----~~l~~~~~~~~~~~-~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGK-PVSEVH-----PHLRGLVDLNLEPI-DEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCC-ChHHhC-----ccccccCCceeecC-CHHHhhcCCCEEE
Confidence            47999999999999999999987 4777744 43321110 000101     111111 1112111 2233445799999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      .+.+.        ....+++..+.+.|  .++|-.|+.
T Consensus        74 ~alP~--------~~s~~~~~~~~~~G--~~VIDlS~~  101 (346)
T TIGR01850        74 LALPH--------GVSAELAPELLAAG--VKVIDLSAD  101 (346)
T ss_pred             ECCCc--------hHHHHHHHHHHhCC--CEEEeCChh
Confidence            98872        24567777777777  578877743

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=98.08  E-value=0.00013  Score=48.92  Aligned_cols=104  Identities=16%  Similarity=0.158  Sum_probs=66.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEA   61 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~   61 (124)
                      ++.+++|.| +|++|..+++.|+..| -++++++.+.-                  ...+...+.+.... .-+++.+..
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~   98 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE   98 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence            356899998 5999999999999999 47777765420                  01111122222222 224566666


Q ss_pred             ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ +.+.+.++++++|+||.+...       ...-..+-+.|.+.+ + .+|+.+
T Consensus        99 ~i-~~~~~~~~~~~~DvVi~~~d~-------~~~r~~l~~~~~~~~-i-p~i~~g  143 (228)
T cd00757          99 RL-DAENAEELIAGYDLVLDCTDN-------FATRYLINDACVKLG-K-PLVSGA  143 (228)
T ss_pred             ee-CHHHHHHHHhCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            66 456778888999999998762       233345667777776 3 455543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=98.07  E-value=2.6e-05  Score=49.57  Aligned_cols=34  Identities=24%  Similarity=0.334  Sum_probs=29.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++|.+.|- |-.|+.+++.|++.|++|++.+|++
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~   34 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSP   34 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccch
Confidence            378999995 9999999999999999999999987

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08223 hypothetical protein; Validated

Probab=98.07  E-value=0.00014  Score=50.27  Aligned_cols=105  Identities=11%  Similarity=0.042  Sum_probs=65.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+|+|.|+ |++|..+++.|+..| -++.+++.+.-                  ...+...+.+..+. .-+++.+...
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~  105 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEG  105 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            467999985 999999999999999 57788776631                  01111122232222 2245566655


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ ++...++++++|+|+.+...     .+...-..+-++|.+.+  ..+|+.+
T Consensus       106 l~-~~n~~~ll~~~DlVvD~~D~-----~~~~~r~~ln~~c~~~~--iP~V~~~  151 (287)
T PRK08223        106 IG-KENADAFLDGVDVYVDGLDF-----FEFDARRLVFAACQQRG--IPALTAA  151 (287)
T ss_pred             cC-ccCHHHHHhCCCEEEECCCC-----CcHHHHHHHHHHHHHcC--CCEEEEe
Confidence            54 55678888999999866542     11233455667888877  3455543

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.03  E-value=7.3e-05  Score=55.13  Aligned_cols=108  Identities=13%  Similarity=0.216  Sum_probs=66.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcc------------cCChHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS------------FADHRSL   69 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D------------~~~~~~~   69 (124)
                      |+|.|.| .|++|..++..|++.|  ++|++++.++     .   +.+.+......+.+-+            +.-..++
T Consensus         2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~-----~---~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~   72 (473)
T PLN02353          2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISV-----P---RIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV   72 (473)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCH-----H---HHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence            6799998 5999999999999884  8899999987     2   2222222211111111            1111234


Q ss_pred             HHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           70 VEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        70 ~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      .++++++|++|.|.+....       ..++.......++.+.+.-+-..+|...|+.|
T Consensus        73 ~~~i~~advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp  130 (473)
T PLN02353         73 EKHVAEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP  130 (473)
T ss_pred             HHHHhcCCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCC
Confidence            5566779999999873221       14566666777776665432345666666654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.02  E-value=0.00012  Score=51.27  Aligned_cols=107  Identities=18%  Similarity=0.062  Sum_probs=68.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |++.|+|++|.+|..++..|...+  .++.+++.+  .......+.....  ....+...  ...+++-+.++++|+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~--~~~~i~~~--~~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN--TPAKVTGY--LGPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC--CcceEEEe--cCCCchHHhcCCCCEEEE
Confidence            589999999999999999998887  578888876  2222222322211  11122211  122345677889999999


Q ss_pred             eCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +||..+        ..+.|..-.+.+++.+.+.++-..++.+|
T Consensus        75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt  117 (310)
T cd01337          75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS  117 (310)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            998542        23467777888888888887322334444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.01  E-value=5e-05  Score=52.58  Aligned_cols=69  Identities=30%  Similarity=0.380  Sum_probs=49.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|+|. |.+|+.+++.|...|++|++..|++     .+....   ...+...+     ..+++.++++++|+|++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~-----~~~~~~---~~~g~~~~-----~~~~l~~~l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS-----ADLARI---TEMGLIPF-----PLNKLEEKVAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHH---HHCCCeee-----cHHHHHHHhccCCEEEE
Confidence            3678999996 8899999999999999999999986     111111   11122221     24567778889999999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus       216 t~P  218 (287)
T TIGR02853       216 TIP  218 (287)
T ss_pred             CCC
Confidence            875

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.01  E-value=9e-05  Score=53.02  Aligned_cols=111  Identities=23%  Similarity=0.279  Sum_probs=72.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeE-EEEcc-----cCChHHHHHHh
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAH-LIEAS-----FADHRSLVEAV   73 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~~~~D-----~~~~~~~~~~~   73 (124)
                      |++.|.| +|++|...+.-|++.||+|++++.++     .+.+.+..-.    .++++ +++-+     ++=..+.++++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~-----~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~   74 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDE-----SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV   74 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence            6789998 69999999999999999999999987     3333222211    11221 11111     22234677888


Q ss_pred             cccCEEEEeCcccc--ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           74 KRVDVVICTISGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        74 ~~~d~vi~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +..|++|.+.|...  ....+.......++...+...-.++|.+=|++|
T Consensus        75 ~~adv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVP  123 (414)
T COG1004          75 KDADVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKSTVP  123 (414)
T ss_pred             hcCCEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCCCC
Confidence            88999999987432  223346666777777776652236776667765

>PRK08328 hypothetical protein; Provisional

Probab=98.00  E-value=0.00029  Score=47.37  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=63.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCC------------c--h-HH----HHHhhhhc-cCCeEEEEc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGL------------D--I-DK----LQMLLSFK-KQGAHLIEA   61 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~------------~--~-~~----~~~~~~~~-~~~~~~~~~   61 (124)
                      +.+++|.| +|++|..+++.|+..| -++++++.+.-+.            +  . .+    .+.+..+. .-.++.+..
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~  105 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG  105 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence            46799998 4999999999999999 5788887553110            0  0 01    11122222 223555555


Q ss_pred             ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+ +++.+.+++++.|+|+.+...       ...-..+-+.|.+.+ + .+|+.+
T Consensus       106 ~~-~~~~~~~~l~~~D~Vid~~d~-------~~~r~~l~~~~~~~~-i-p~i~g~  150 (231)
T PRK08328        106 RL-SEENIDEVLKGVDVIVDCLDN-------FETRYLLDDYAHKKG-I-PLVHGA  150 (231)
T ss_pred             cC-CHHHHHHHHhcCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEe
Confidence            55 456678889999999998752       222334556677776 3 455443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.00  E-value=4.1e-05  Score=52.90  Aligned_cols=36  Identities=25%  Similarity=0.426  Sum_probs=32.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |..++|.|.|+ |..|..++..|++.|++|++.++++
T Consensus         1 ~~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          1 MDIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            55678999985 9999999999999999999999987

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=98.00  E-value=0.00044  Score=46.74  Aligned_cols=102  Identities=20%  Similarity=0.179  Sum_probs=64.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+++|.|+ |++|..+++.|++.| -++++++.+.-+                  ..+...+.+..+. .-+++.+...
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~  102 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK  102 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            467999985 999999999999999 578888766311                  0111112222222 2234555444


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      + +.+.+.+++++.|+||.+...       ...-..+-+.|.+.+ + .+|+.
T Consensus       103 i-~~~~~~~~~~~~DlVvd~~D~-------~~~r~~ln~~~~~~~-i-p~v~~  145 (240)
T TIGR02355       103 L-DDAELAALIAEHDIVVDCTDN-------VEVRNQLNRQCFAAK-V-PLVSG  145 (240)
T ss_pred             C-CHHHHHHHhhcCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEE
Confidence            4 446678889999999998752       233344667777776 3 45543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.99  E-value=0.00012  Score=51.52  Aligned_cols=107  Identities=14%  Similarity=0.032  Sum_probs=67.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCC--CchHHHHHhhhh-c-cCCeEEEEcccCChHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIG--LDIDKLQMLLSF-K-KQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~   71 (124)
                      .+++.|+|++|.+|..++..|+..|.       ++.+++.++..  ......+..... . ..++.+.       ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence            46899999999999999999998773       68888885422  222222222111 0 0112211       12246


Q ss_pred             HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCC-ccEEEEec
Q 033236           72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGN-VKKRKLNE  116 (124)
Q Consensus        72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~s  116 (124)
                      .++++|+||.+||..+        ....|..-.+.+.+.+.+.++ -..++.+|
T Consensus        75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (322)
T cd01338          75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG  128 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Confidence            6778999999998542        234567777888888888762 23455554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.99  E-value=0.00023  Score=48.29  Aligned_cols=89  Identities=19%  Similarity=0.241  Sum_probs=66.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   80 (124)
                      +++++|.|||+- |+.+++.|.+.|+++++..-...+.          ....+..+..+-+.+.+.+.++++  ++++||
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI   70 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI   70 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence            467999999876 8999999999999888876655211          123466788888889999999987  599999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ...-|+.     ..-+.++.++|.+.+
T Consensus        71 DATHPfA-----~~is~~a~~ac~~~~   92 (248)
T PRK08057         71 DATHPYA-----AQISANAAAACRALG   92 (248)
T ss_pred             ECCCccH-----HHHHHHHHHHHHHhC
Confidence            8766543     333567777777776

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.99  E-value=0.00026  Score=45.59  Aligned_cols=101  Identities=15%  Similarity=0.089  Sum_probs=63.2

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC---CC--------------CchHHHHHhhhhc-cCCeEEEEcccCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD---IG--------------LDIDKLQMLLSFK-KQGAHLIEASFAD   65 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~---~~--------------~~~~~~~~~~~~~-~~~~~~~~~D~~~   65 (124)
                      +++|.|+ |++|..+++.|++.|. ++++++.+.   +.              ..+...+.+..+. .-+++.+...++ 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            4789984 9999999999999996 688888774   11              0111112222221 234555555554 


Q ss_pred             hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236           66 HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREA-GNVKKRKLNE  116 (124)
Q Consensus        66 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s  116 (124)
                      .+.+.+.++++|+||.+..       |...-..+.+.+.+. +  ..+|+.+
T Consensus        79 ~~~~~~~l~~~DlVi~~~d-------~~~~r~~i~~~~~~~~~--ip~i~~~  121 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFD-------NAETKAMLAESLLGNKN--KPVVCAS  121 (174)
T ss_pred             hhhHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHHCC--CCEEEEe
Confidence            3667888999999999854       233334566777766 5  3455443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.98  E-value=0.00019  Score=51.49  Aligned_cols=103  Identities=17%  Similarity=0.174  Sum_probs=64.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      .++++|.| +|++|..++..|+..|. ++++++++.-                  ...+...+.+.... .-.++.+...
T Consensus       135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  213 (376)
T PRK08762        135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER  213 (376)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            56799997 49999999999999995 7888887721                  01111122222222 1234444444


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ .+.+..++++.|+||++...       ...-..+-+.|.+.+ + .+|+.+
T Consensus       214 ~~-~~~~~~~~~~~D~Vv~~~d~-------~~~r~~ln~~~~~~~-i-p~i~~~  257 (376)
T PRK08762        214 VT-SDNVEALLQDVDVVVDGADN-------FPTRYLLNDACVKLG-K-PLVYGA  257 (376)
T ss_pred             CC-hHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            43 45677788899999998762       222334667777776 3 455443

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.97  E-value=0.00012  Score=51.34  Aligned_cols=106  Identities=21%  Similarity=0.113  Sum_probs=67.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      |+.|+|++|.+|..++..|...+  .++.++++++  ......+.... . ....+....  +.+++.+.++++|+||.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~-~-~~~~i~~~~--~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI-P-TAASVKGFS--GEEGLENALKGADVVVIP   74 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC-C-cCceEEEec--CCCchHHHcCCCCEEEEe
Confidence            58899999999999999998877  4788888876  22222222211 1 112222111  122356788999999999


Q ss_pred             Ccccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           83 ISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        83 a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +|..+        ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus        75 aG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        75 AGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            98542        23456777788888888877322334444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.95  E-value=6.8e-05  Score=53.70  Aligned_cols=73  Identities=25%  Similarity=0.377  Sum_probs=53.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      ..+++|+|+ |.+|...++.+...|.+|++++|++     .+.+.+......   .+..+..+++.+.+.+.++|+||++
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~-----~~~~~l~~~~g~---~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI-----DRLRQLDAEFGG---RIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH-----HHHHHHHHhcCc---eeEeccCCHHHHHHHHccCCEEEEc
Confidence            356899986 9999999999999999999999886     222222111111   2334566788899999999999998


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      ++
T Consensus       238 ~~  239 (370)
T TIGR00518       238 VL  239 (370)
T ss_pred             cc
Confidence            74

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.95  E-value=5.4e-05  Score=52.14  Aligned_cols=70  Identities=24%  Similarity=0.383  Sum_probs=46.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCC-eEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQG-AHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++|+|+ |++|++++..|...| .+|+++.|+.    +...+..+.+.... +.+   +.    +..+.+.++|+||
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~----~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivI  190 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV----ERAEELAKLFGALGKAEL---DL----ELQEELADFDLII  190 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhhhccceee---cc----cchhccccCCEEE
Confidence            578999996 999999999999999 7999999987    22222222222111 111   11    2235567799999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      |+.+
T Consensus       191 naTp  194 (278)
T PRK00258        191 NATS  194 (278)
T ss_pred             ECCc
Confidence            9875

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.94  E-value=0.00073  Score=41.90  Aligned_cols=101  Identities=20%  Similarity=0.209  Sum_probs=64.2

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA   64 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~   64 (124)
                      +++|.|+ |++|..+++.|+..|. ++++++.+.-+                  ..+...+.+..+. .-.++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4789985 9999999999999995 78888766210                  1111112222222 223445555554


Q ss_pred             ChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        65 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +. .....+++.|+||.+...       ......+.+.|.+.+  ..++...
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-------~~~~~~l~~~~~~~~--i~~i~~~  121 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-------IAVRRALNRACKELG--IPVIDAG  121 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-------HHHHHHHHHHHHHcC--CCEEEEc
Confidence            43 346778899999988762       444566788888887  3455554

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=97.93  E-value=0.00031  Score=50.72  Aligned_cols=70  Identities=14%  Similarity=0.158  Sum_probs=55.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      .+++|.|. |.+|+.+++.|.++|.++++++.+.    .      +.....+..++.+|.+|++.++++ +++++.++.+
T Consensus       241 ~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~----~------~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~  309 (393)
T PRK10537        241 DHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG----L------EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL  309 (393)
T ss_pred             CeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch----h------hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence            56889985 8999999999999999998888653    1      111234577999999999999997 6789998876


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus       310 t~  311 (393)
T PRK10537        310 RD  311 (393)
T ss_pred             CC
Confidence            64

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.93  E-value=0.0001  Score=51.80  Aligned_cols=81  Identities=16%  Similarity=0.168  Sum_probs=50.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH---HHhhhhccCCeE--EEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL---QMLLSFKKQGAH--LIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .+++.|.|+ |-+|..++..++..|++|++.++++...+....   +.++.+...+..  .....++-..++..+++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            467999985 999999999999999999999998732211111   111111111110  01112222235677888999


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      .|+-+..
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9998876

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.91  E-value=0.00011  Score=51.16  Aligned_cols=69  Identities=28%  Similarity=0.357  Sum_probs=50.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|+|. |.+|+.++..|...|.+|++.+|++     .+.....   ..+...+     ..+++.+.+.++|+||+
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~-----~~~~~~~---~~G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS-----AHLARIT---EMGLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHH---HcCCeee-----cHHHHHHHhCCCCEEEE
Confidence            3678999996 8899999999999999999999986     2222221   2233322     23567778889999999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus       217 t~p  219 (296)
T PRK08306        217 TIP  219 (296)
T ss_pred             CCC
Confidence            875

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.91  E-value=8.3e-05  Score=54.28  Aligned_cols=74  Identities=19%  Similarity=0.148  Sum_probs=48.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi   80 (124)
                      ++++++|+|+++ +|.+.++.|++.|++|.+.+++......    ....+...++.+..++.  +..+   .+ ++|.||
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~----~~~~l~~~g~~~~~~~~--~~~~---~~~~~d~vV   73 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP----EAQELLEEGIKVICGSH--PLEL---LDEDFDLMV   73 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh----HHHHHHhcCCEEEeCCC--CHHH---hcCcCCEEE
Confidence            367899999865 9999999999999999999876522111    11122334555554432  2222   23 489999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      +++|.
T Consensus        74 ~s~gi   78 (447)
T PRK02472         74 KNPGI   78 (447)
T ss_pred             ECCCC
Confidence            99874

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.90  E-value=0.00045  Score=48.35  Aligned_cols=100  Identities=14%  Similarity=0.201  Sum_probs=66.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc--c-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK--K-QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+.|.|+ |.+|..++..|+..+  -++.+++.++........+......  . .++.+..+|       -+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5789997 999999999998887  4789999876444334444333222  1 234444333       3567789999


Q ss_pred             EEeCccccc----------eecchHHHHHHHHHHHHhCCccEEE
Q 033236           80 ICTISGVHF----------RSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        80 i~~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      |..||..+-          .+.|..-.+.+.+.+.+.+ .+-++
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~  115 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVI  115 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence            999985321          2456677788888888887 34443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.90  E-value=0.00087  Score=45.45  Aligned_cols=102  Identities=21%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCC------------------chHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGL------------------DIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~------------------~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+++|.|+ |++|..+++.|+..| -++++++.+.-+.                  .+...+.+..+. .-+++.+...
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~  110 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR  110 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence            568999996 999999999999999 5788887663111                  011112222222 2345566665


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ++ ++.+..++++.|+||.+..       |...-..+-+.|.+.+  ..+|+.
T Consensus       111 i~-~~~~~~~~~~~DiVi~~~D-------~~~~r~~ln~~~~~~~--ip~v~~  153 (245)
T PRK05690        111 LD-DDELAALIAGHDLVLDCTD-------NVATRNQLNRACFAAK--KPLVSG  153 (245)
T ss_pred             CC-HHHHHHHHhcCCEEEecCC-------CHHHHHHHHHHHHHhC--CEEEEe
Confidence            54 4567788899999999875       2333345667777776  345543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.89  E-value=0.0005  Score=45.17  Aligned_cols=104  Identities=18%  Similarity=0.276  Sum_probs=66.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC---Cc-----------------hHHHHHhhhhc-cCCeEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG---LD-----------------IDKLQMLLSFK-KQGAHLIE   60 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~---~~-----------------~~~~~~~~~~~-~~~~~~~~   60 (124)
                      ..+++|.|+ |++|..+++.|+..| .++++++.+.-+   ..                 +...+++.... .-+++.+.
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~   97 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVE   97 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            468999985 779999999999999 578888766311   00                 00112222222 23456666


Q ss_pred             cccCC-hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           61 ASFAD-HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        61 ~D~~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .++.+ .+.....+++.|+|+.+...       ......+-+.|.+.+ + .+++.+
T Consensus        98 ~~~~~~~~~~~~~~~~~dvVi~~~d~-------~~~~~~ln~~c~~~~-i-p~i~~~  145 (198)
T cd01485          98 EDSLSNDSNIEEYLQKFTLVIATEEN-------YERTAKVNDVCRKHH-I-PFISCA  145 (198)
T ss_pred             cccccchhhHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            66643 45667778899999977542       334455677888877 3 455555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.89  E-value=0.0001  Score=52.27  Aligned_cols=92  Identities=16%  Similarity=0.214  Sum_probs=52.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++.|.||+|++|+.+++.|.++++   ++..+....+.-  +.   .   ...+.....-++ +++    .++++|+|
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaG--k~---~---~~~~~~~~v~~~-~~~----~~~~~D~v   73 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAG--KK---V---TFEGRDYTVEEL-TED----SFDGVDIA   73 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCC--Ce---e---eecCceeEEEeC-CHH----HHcCCCEE
Confidence            46899999999999999999998775   343333222110  00   0   011122222222 222    34679999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |.+++.        .....+++.+.+.|  .++|-.|+
T Consensus        74 f~a~p~--------~~s~~~~~~~~~~g--~~VIDlS~  101 (344)
T PLN02383         74 LFSAGG--------SISKKFGPIAVDKG--AVVVDNSS  101 (344)
T ss_pred             EECCCc--------HHHHHHHHHHHhCC--CEEEECCc
Confidence            998872        23455555555566  35665554

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=97.87  E-value=0.00012  Score=52.32  Aligned_cols=74  Identities=23%  Similarity=0.310  Sum_probs=60.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChH-HHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHR-SLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-~~~~~~~~~d~v   79 (124)
                      ++.+++.| +|++.+.++..|.+++ .+|++-+|..        ...+.+ +..+++.+..|+.+++ .+.+..++.|.+
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~--------~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~v   72 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTL--------KDAEALVKGINIKAVSLDVADEELALRKEVKPLDLV   72 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhhH--------HHHHHHhcCCCccceEEEccchHHHHHhhhccccee
Confidence            57799998 5999999999999886 7888888876        222222 3456899999999998 999999999999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      +...+.
T Consensus        73 iSLlP~   78 (445)
T KOG0172|consen   73 ISLLPY   78 (445)
T ss_pred             eeeccc
Confidence            998763

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.86  E-value=0.00038  Score=48.45  Aligned_cols=68  Identities=19%  Similarity=0.316  Sum_probs=45.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+|.+.| .|..|..++..|.+.|++|.+.+|++     .+.+.+.   ..+...    ..+.+++.+..+++|+|+.+.
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~-----~~~~~l~---~~g~~~----~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQ-----DAVKAMK---EDRTTG----VANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHH---HcCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence            4789998 59999999999999999999999987     2222221   122111    134455555556677777776


Q ss_pred             c
Q 033236           84 S   84 (124)
Q Consensus        84 ~   84 (124)
                      +
T Consensus        68 p   68 (298)
T TIGR00872        68 P   68 (298)
T ss_pred             C
Confidence            5

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.86  E-value=0.00063  Score=44.66  Aligned_cols=102  Identities=19%  Similarity=0.217  Sum_probs=63.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+++|.|+ |++|..+++.|+..| .++++++.+.-+                  ..+...+.+..+. .-.++.....
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~   99 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD   99 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC
Confidence            568999985 779999999999999 578888766311                  0111122233332 2245555555


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++  +...+.+++.|+|+.+...       ...-..+-+.|.+.+ + .+++.+
T Consensus       100 ~~--~~~~~~~~~~dvVi~~~~~-------~~~~~~ln~~c~~~~-i-p~i~~~  142 (197)
T cd01492         100 IS--EKPEEFFSQFDVVVATELS-------RAELVKINELCRKLG-V-KFYATG  142 (197)
T ss_pred             cc--ccHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            54  2345667899999987642       334455667788877 4 455554

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.85  E-value=0.00022  Score=48.68  Aligned_cols=98  Identities=18%  Similarity=0.136  Sum_probs=64.4

Q ss_pred             EEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +.|+|++|.+|..++..|+..|    .++.++++++........+ +.+.....   ....++-.+++.+.++++|+|+.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-l~~~~~~~---~~~~i~~~~d~~~~~~~aDiVv~   76 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-LQDAVEPL---ADIKVSITDDPYEAFKDADVVII   76 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-HHHhhhhc---cCcEEEECCchHHHhCCCCEEEE
Confidence            4689998999999999999888    7899999887443333332 21211111   11222223345677889999999


Q ss_pred             eCccccc--------eecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHF--------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~--------~~~~~~~~~~~~~~~~~~~  107 (124)
                      .++....        ...|..-.+.+++.+.+..
T Consensus        77 t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~  110 (263)
T cd00650          77 TAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS  110 (263)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            8875322        2345666777888888776

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.85  E-value=0.00022  Score=50.22  Aligned_cols=107  Identities=18%  Similarity=0.065  Sum_probs=67.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--C-----eEEEEeCCCCC--CchHHHHHhhhhc--cCCeEEEEcccCChHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--H-----ETYVLQRPDIG--LDIDKLQMLLSFK--KQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~-----~v~~~~r~~~~--~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~   71 (124)
                      ..++.|+|++|.+|..++..|...+  -     ++.+++.++..  ......+......  ..+..+.       ..--+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence            4689999999999999999998877  3     78888886421  2222333222110  0112111       22346


Q ss_pred             HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCC-ccEEEEec
Q 033236           72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGN-VKKRKLNE  116 (124)
Q Consensus        72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~s  116 (124)
                      .++++|+||.+||..+        ....|..-.+.+.+.+.+.++ -..++.+|
T Consensus        76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            6778999999998542        234567778888888888873 23444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.85  E-value=0.00068  Score=45.61  Aligned_cols=104  Identities=14%  Similarity=0.124  Sum_probs=64.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEA   61 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~   61 (124)
                      ++.+++|.| .|++|.++++.|++.| -++++++.+.-.                  ..+...+.+..+. .-.++.+..
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~   88 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE   88 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            356899998 5999999999999999 588888765311                  1111112222222 223455555


Q ss_pred             ccCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           62 SFADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        62 D~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .++ ++....++. +.|+||.+...       ...-..+.+.|.+.+ + .+|.+.
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD~-------~~~k~~L~~~c~~~~-i-p~I~s~  134 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAIDS-------IRAKVALIAYCRKRK-I-PVISSM  134 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCCC-------HHHHHHHHHHHHHhC-C-CEEEEe
Confidence            443 455666664 69999998752       334456888888877 3 455544

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.84  E-value=0.00033  Score=49.41  Aligned_cols=107  Identities=17%  Similarity=0.070  Sum_probs=65.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--C-----eEEEEeCCCCC--CchHHHHHhhhh-c-cCCeEEEEcccCChHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--H-----ETYVLQRPDIG--LDIDKLQMLLSF-K-KQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~-----~v~~~~r~~~~--~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~   71 (124)
                      ++++.|+|++|.+|..++..|...+  -     ++.+++.++..  ......+..... . ..++.+.       ...-+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence            4689999999999999999988766  2     68888886421  122222222111 0 0122221       12346


Q ss_pred             HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhC-CccEEEEec
Q 033236           72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAG-NVKKRKLNE  116 (124)
Q Consensus        72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~s  116 (124)
                      .++++|+||.+||..+        ....|..-.+.+.+.+.+.. +-..++.+|
T Consensus        77 ~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         77 AFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            6778999999998532        13456677788888888844 223455555

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.84  E-value=0.00045  Score=48.34  Aligned_cols=104  Identities=22%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+.|+|+ |.+|+.++..|+.++  .++.+++.....++-...+.......... ..+.+| .+    -+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            57999999 999999999998776  48999999853333233332222111111 222232 12    45677899999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEE
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKL  114 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~  114 (124)
                      ..||..+        ....|..-.+.+.+.+.+.+ .+-+++
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivl  115 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVL  115 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEE
Confidence            9998442        24567777888888888887 344443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.84  E-value=0.00051  Score=49.27  Aligned_cols=96  Identities=17%  Similarity=0.254  Sum_probs=63.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+++|.|+ |++|..++..|+..| -++++++.+.-+                  ......+++..+. .-+++.+...
T Consensus        41 ~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~  119 (370)
T PRK05600         41 NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRER  119 (370)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeee
Confidence            467999985 999999999999999 588888876210                  1111122222222 2345666665


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ++ ++.+.++++++|+|+.|...       ...-..+-+.|.+.+
T Consensus       120 i~-~~~~~~~~~~~DlVid~~Dn-------~~~r~~in~~~~~~~  156 (370)
T PRK05600        120 LT-AENAVELLNGVDLVLDGSDS-------FATKFLVADAAEITG  156 (370)
T ss_pred             cC-HHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC
Confidence            64 56677889999999988752       333344556777776

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.84  E-value=0.00022  Score=51.70  Aligned_cols=33  Identities=27%  Similarity=0.447  Sum_probs=30.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.|.| .|++|..++..|++.|++|++.++++
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQ   33 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCH
Confidence            4788998 59999999999999999999999987

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.82  E-value=0.00056  Score=48.81  Aligned_cols=103  Identities=12%  Similarity=0.163  Sum_probs=65.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+++|.|+ |++|..+++.|+..| -++++++.+.-+                  ..+...+.+..+. .-+++.+...
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~  106 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR  106 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence            568999985 999999999999999 578888766310                  1111222232222 2245555566


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ ++...+++++.|+|+.+...       ...-..+-++|.+.+ + .+|+.+
T Consensus       107 i~-~~~~~~~~~~~DvVvd~~d~-------~~~r~~~n~~c~~~~-i-p~v~~~  150 (355)
T PRK05597        107 LT-WSNALDELRDADVILDGSDN-------FDTRHLASWAAARLG-I-PHVWAS  150 (355)
T ss_pred             cC-HHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence            54 45667788999999998752       222334566777776 3 355443

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.82  E-value=6e-05  Score=52.20  Aligned_cols=66  Identities=23%  Similarity=0.347  Sum_probs=44.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|++.|.| .|.+|..+++.|.+.|++|.+.+|++     ...+..   ...++..       .++..++++++|+|+.+
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~-----~~~~~~---~~~g~~~-------~~~~~e~~~~~d~vi~~   65 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNP-----EAVAEV---IAAGAET-------ASTAKAVAEQCDVIITM   65 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH-----HHHHHH---HHCCCee-------cCCHHHHHhcCCEEEEe
Confidence            46899998 59999999999999999999988886     222211   1122211       12344456678888877


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        66 vp   67 (296)
T PRK11559         66 LP   67 (296)
T ss_pred             CC
Confidence            65

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.82  E-value=0.00042  Score=47.29  Aligned_cols=67  Identities=27%  Similarity=0.252  Sum_probs=43.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++.|+|++|.+|+.+++.+.+. +.++..+. +++...     ...          -..++...++++++++++|+|+.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~-----~~~----------~~~~i~~~~dl~~ll~~~DvVid   66 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPL-----VGQ----------GALGVAITDDLEAVLADADVLID   66 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc-----ccc----------CCCCccccCCHHHhccCCCEEEE
Confidence            68999999999999999888764 67877654 443111     000          11123233456666667898888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      ++.|
T Consensus        67 ~t~p   70 (257)
T PRK00048         67 FTTP   70 (257)
T ss_pred             CCCH
Confidence            7753

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.82  E-value=0.00032  Score=49.28  Aligned_cols=74  Identities=16%  Similarity=0.258  Sum_probs=47.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh----HHHHHHh-cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH----RSLVEAV-KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~-~~~d   77 (124)
                      +.+++|+|++|.+|..+++.+...|.+|+++++++     .+.+.+..  ..++..+ .|..+.    +.+.+.. .++|
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~-----~~~~~~~~--~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd  223 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD-----EKVDLLKN--KLGFDDA-FNYKEEPDLDAALKRYFPNGID  223 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH--hcCCcee-EEcCCcccHHHHHHHhCCCCcE
Confidence            56899999999999999998888899998888876     23333322  0222211 222222    2233332 3589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +++.+.|
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.81  E-value=0.00047  Score=50.49  Aligned_cols=68  Identities=24%  Similarity=0.365  Sum_probs=46.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |++.|+||.|.+|..++..|.+.|++|++.+|++.    ...+....   .++..       ..+...+++++|+||.+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~----~~~~~a~~---~gv~~-------~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPK----KGKEVAKE---LGVEY-------ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChH----HHHHHHHH---cCCee-------ccCHHHHhccCCEEEEec
Confidence            57999998999999999999999999999999861    11111111   12211       112344566788888877


Q ss_pred             cc
Q 033236           84 SG   85 (124)
Q Consensus        84 ~~   85 (124)
                      ++
T Consensus        67 p~   68 (437)
T PRK08655         67 PI   68 (437)
T ss_pred             CH
Confidence            63

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.81  E-value=0.0005  Score=47.73  Aligned_cols=72  Identities=26%  Similarity=0.378  Sum_probs=47.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCC-hHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFAD-HRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~-~~~~~~~~~~~d~vi   80 (124)
                      +.+++|+|++|.+|..+++.+...|.+|+++++++     ...+....   .+.. ++  |..+ .+.+.+. .++|.++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~---~~~~~~~--~~~~~~~~~~~~-~~~d~v~  231 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP-----EKLKILKE---LGADYVI--DGSKFSEDVKKL-GGADVVI  231 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHH---cCCcEEE--ecHHHHHHHHhc-cCCCEEE
Confidence            46799999999999999999999999999988876     22222222   1221 22  2211 2223332 2689999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      +++|.
T Consensus       232 ~~~g~  236 (332)
T cd08259         232 ELVGS  236 (332)
T ss_pred             ECCCh
Confidence            99873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.81  E-value=0.00052  Score=47.85  Aligned_cols=109  Identities=12%  Similarity=0.137  Sum_probs=62.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++++.|+|+ |.+|..++..++..|. +|.+++++++.......+..........   ...+....+. +.++++|+||.
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~---~~~i~~~~d~-~~~~~aDiVii   76 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGF---DTKITGTNDY-EDIAGSDVVVI   76 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCC---CcEEEeCCCH-HHHCCCCEEEE
Confidence            378999998 9999999999998764 8999999764322222221111111111   1111111223 34689999999


Q ss_pred             eCccccce--------ecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVHFR--------SHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++|.....        ..|..-...+++.+.+..+-..++..+
T Consensus        77 ~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         77 TAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            98743211        234555666777776665222344444

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.81  E-value=0.00011  Score=48.39  Aligned_cols=36  Identities=22%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |.+|+++|.|. |.+|+++++.|.+.|++|++.++++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            35689999996 7999999999999999999888875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.80  E-value=0.00033  Score=49.06  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=28.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~   36 (124)
                      |+.++.|.||+|++|..+++.|.++. .++..+..+
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~   36 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA   36 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence            45789999999999999999998887 455555544

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.80  E-value=0.00029  Score=49.51  Aligned_cols=109  Identities=13%  Similarity=0.094  Sum_probs=66.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ..+++.|+|| |.+|..++..++..| .++.++++++...+....+...........   ..+....+++ .++++|+||
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~---~~i~~~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN---INILGTNNYE-DIKDSDVVV   78 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC---eEEEeCCCHH-HhCCCCEEE
Confidence            3578999996 999999999998888 788899988743322222221111101110   1111112344 668999999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhCCccE-EEEec
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKK-RKLNE  116 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~i~~s  116 (124)
                      .++|....        ...|..-.+.+++.+.+.. .+. ++..|
T Consensus        79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvs  122 (319)
T PTZ00117         79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVT  122 (319)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence            99975432        2345555677777777776 344 44544

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.79  E-value=0.00019  Score=52.17  Aligned_cols=73  Identities=18%  Similarity=0.326  Sum_probs=51.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|.|+ |+.|+.++..|...| .++++..|+.    .......+.+.  ...     ....+++...+.++|+||
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~----~ra~~La~~~~--~~~-----~~~~~~l~~~l~~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTI----EKAQKITSAFR--NAS-----AHYLSELPQLIKKADIII  247 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHHhc--CCe-----EecHHHHHHHhccCCEEE
Confidence            3578999996 999999999999999 5789999986    22222222221  112     223456788888999999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      ++.+..
T Consensus       248 ~aT~a~  253 (414)
T PRK13940        248 AAVNVL  253 (414)
T ss_pred             ECcCCC
Confidence            998743

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.79  E-value=4.2e-05  Score=51.44  Aligned_cols=102  Identities=18%  Similarity=0.148  Sum_probs=71.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      .+++|||+-|.+|..+++.|... | ..|++.+....+      +..    -..=.++-.|+.|...+++.+-  .+|-+
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp------~~V----~~~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP------ANV----TDVGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc------hhh----cccCCchhhhhhccccHHHhhccccccee
Confidence            57999999999999999988764 6 455554432200      000    1122477889999999988753  58999


Q ss_pred             EEeCccc------c---ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGV------H---FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +|..+..      +   ..++|+.|..|+++.+++++ .+-|+-++
T Consensus       115 ~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPST  159 (366)
T KOG2774|consen  115 VHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPST  159 (366)
T ss_pred             eeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeeccc
Confidence            9965422      1   24689999999999999998 65554433

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.79  E-value=0.0013  Score=45.19  Aligned_cols=105  Identities=15%  Similarity=0.204  Sum_probs=65.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC---C-------ch--------HHHHHhhhhc-cCCeEEEEc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG---L-------DI--------DKLQMLLSFK-KQGAHLIEA   61 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~---~-------~~--------~~~~~~~~~~-~~~~~~~~~   61 (124)
                      .+.+++|.| .|++|.++++.|++.| -++++++.+.-.   .       .+        ...+.+..+. .-.++.+. 
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-  106 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-  106 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-
Confidence            356899998 4999999999999999 688888766311   0       00        1112222221 11244443 


Q ss_pred             ccCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           62 SFADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        62 D~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +..+++....++. ++|+||.+.+.       ...-..+.+.|.+.+ + .+|.+.+
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~-------~~~k~~L~~~c~~~~-i-p~I~~gG  154 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDS-------VRPKAALIAYCRRNK-I-PLVTTGG  154 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEECC
Confidence            2335667777764 69999998863       233456788888777 3 4555543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=97.79  E-value=5.6e-05  Score=47.77  Aligned_cols=73  Identities=22%  Similarity=0.413  Sum_probs=46.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-----cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-----KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ||.|.|| |..|.+++..|.++|++|++..|++     ...+.+....     -+++..- ..+.-..+++++++++|++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~-----~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~I   73 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDE-----EQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADII   73 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCH-----HHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEE
Confidence            5889996 9999999999999999999999987     2222221111     0111111 1222234677888999998


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +.+.+
T Consensus        74 iiavP   78 (157)
T PF01210_consen   74 IIAVP   78 (157)
T ss_dssp             EE-S-
T ss_pred             Eeccc
Confidence            88776

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.78  E-value=8.7e-05  Score=51.37  Aligned_cols=35  Identities=26%  Similarity=0.397  Sum_probs=31.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG   39 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~   39 (124)
                      +++.|.|+ |..|..++..++..|++|++.+++++.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            47899986 999999999999999999999999843

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.78  E-value=0.00012  Score=50.54  Aligned_cols=73  Identities=25%  Similarity=0.324  Sum_probs=46.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|.|| |+.+++++..|++.| .+|+++.|+.    +...+..+.+..........+..+.+...    ..|.+||
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~----~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliIN  196 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTR----ERAEELADLFGELGAAVEAAALADLEGLE----EADLLIN  196 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhhhccccccccccccccccc----ccCEEEE
Confidence            478999996 999999999999999 6899999997    23333333333222211122222222222    6899999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus       197 aTp  199 (283)
T COG0169         197 ATP  199 (283)
T ss_pred             CCC
Confidence            764

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.77  E-value=0.00053  Score=46.82  Aligned_cols=34  Identities=26%  Similarity=0.442  Sum_probs=30.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~   37 (124)
                      +|++.|.|+ |.+|..++..|.+.|   ++|.+.+|++
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            477999984 999999999999988   7888889886

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.76  E-value=0.00011  Score=50.83  Aligned_cols=71  Identities=15%  Similarity=0.209  Sum_probs=47.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .++++|.|+ |+.|++++..|...|. +|++++|+.    +......+.+..  ....+...     +++.+.++++|+|
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~----~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~~aDiV  196 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDP----ARAAALADELNARFPAARATAG-----SDLAAALAAADGL  196 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHHHHhhCCCeEEEec-----cchHhhhCCCCEE
Confidence            468999995 8999999999999995 899999987    222222222221  12222221     2344556789999


Q ss_pred             EEeC
Q 033236           80 ICTI   83 (124)
Q Consensus        80 i~~a   83 (124)
                      ||+.
T Consensus       197 InaT  200 (284)
T PRK12549        197 VHAT  200 (284)
T ss_pred             EECC
Confidence            9984

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.76  E-value=0.00026  Score=49.62  Aligned_cols=107  Identities=17%  Similarity=0.149  Sum_probs=65.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+|+.|+|+ |.+|..++..|+..|  .++.+++.++........+....... ....+...  .|.   + .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~-~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---S-VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---H-HhCCCCEE
Confidence            468999996 999999999998877  57888888773332333332222111 11123321  122   3 36889999


Q ss_pred             EEeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |.++|...-        ...|..-.+.+.+.+.+.++-..++.+|
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999985321        2345666777778887776322344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.76  E-value=0.0004  Score=48.49  Aligned_cols=73  Identities=16%  Similarity=0.224  Sum_probs=47.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HH-HHHHh-cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RS-LVEAV-KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~-~~~d   77 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++     .+.+....   .++..+ .|..+.   +. +.... .++|
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~-----~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~~~gvd  209 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD-----EKVAYLKK---LGFDVA-FNYKTVKSLEETLKKASPDGYD  209 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---cCCCEE-EeccccccHHHHHHHhCCCCeE
Confidence            46899999999999999988888899999888876     33333322   222211 222222   22 22222 2589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +++.+.|
T Consensus       210 vv~d~~G  216 (325)
T TIGR02825       210 CYFDNVG  216 (325)
T ss_pred             EEEECCC
Confidence            9999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.76  E-value=0.00018  Score=49.72  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=48.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|.|+ |+.|++++..|.+.|. +|+++.|+.    +...+..+.+... ..+..  +...+++.....++|+|||
T Consensus       125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~----~ka~~La~~~~~~-~~~~~--~~~~~~~~~~~~~~DiVIn  196 (282)
T TIGR01809       125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNP----DKLSRLVDLGVQV-GVITR--LEGDSGGLAIEKAAEVLVS  196 (282)
T ss_pred             CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCH----HHHHHHHHHhhhc-Cccee--ccchhhhhhcccCCCEEEE
Confidence            568999985 9999999999999994 799999987    2222222222211 11111  1122344555677999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       197 aTp~  200 (282)
T TIGR01809       197 TVPA  200 (282)
T ss_pred             CCCC
Confidence            8753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.76  E-value=0.00024  Score=48.75  Aligned_cols=34  Identities=21%  Similarity=0.364  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+|+ |++|++++..|.+.|++|++..|++
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~  150 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV  150 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            567999997 8999999999999999999999886

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.75  E-value=0.0012  Score=43.65  Aligned_cols=87  Identities=23%  Similarity=0.324  Sum_probs=59.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|.|| |.+|.+-++.|++.|.+|++++....    .....+.  ...+++++..++. +++    +++++.||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~----~~l~~l~--~~~~i~~~~~~~~-~~d----l~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE----SELTLLA--EQGGITWLARCFD-ADI----LEGAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC----HHHHHHH--HcCCEEEEeCCCC-HHH----hCCcEEEEE
Confidence            5789999996 99999999999999999999987652    1111111  2347888888876 332    467887776


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.       ..-...+.+.|.+.+
T Consensus        76 at~d-------~~ln~~i~~~a~~~~   94 (205)
T TIGR01470        76 ATDD-------EELNRRVAHAARARG   94 (205)
T ss_pred             CCCC-------HHHHHHHHHHHHHcC
Confidence            6552       112345666776655

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.75  E-value=0.00052  Score=47.97  Aligned_cols=33  Identities=24%  Similarity=0.405  Sum_probs=30.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.|+ |.+|..++..|++.|++|.+.+|++
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            57999985 9999999999999999999999986

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.75  E-value=0.00019  Score=45.92  Aligned_cols=36  Identities=22%  Similarity=0.347  Sum_probs=31.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++|.|+++.+|..+++.|.++|.+|++..|+.
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999855679999999999999998888864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.75  E-value=0.0011  Score=46.59  Aligned_cols=102  Identities=25%  Similarity=0.246  Sum_probs=65.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA   64 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~   64 (124)
                      +++|.|+ |++|..+++.|+..| -++++++.+.-+                  .++...+.+..+. .-.++....++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5789985 999999999999999 578888766311                  1111112222222 234667777787


Q ss_pred             ChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        65 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +.+.....+++.|+|+.+..       |...-..+-+.|...+  ..+|...
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D-------n~~ar~~in~~c~~~~--ip~I~~g  122 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD-------NLAARRHVNKMCLAAD--VPLIESG  122 (312)
T ss_pred             CccchHHHHhcCCEEEECCC-------CHHHHHHHHHHHHHCC--CCEEEEe
Confidence            65445677889999998765       2334455666777666  3455443

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=97.74  E-value=0.0009  Score=45.12  Aligned_cols=102  Identities=14%  Similarity=0.112  Sum_probs=63.2

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA   64 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~   64 (124)
                      +++|.| .|++|..+++.|+..| -++++++.+.-+                  ..+...+.+.... .-+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            478898 5999999999999999 578888766311                  0001112222222 234667777776


Q ss_pred             ChHHH-HHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           65 DHRSL-VEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        65 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +.++. ...+++.|+|+.+..       |...-..+-+.|.+.+  ..+|..+
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D-------n~~aR~~ln~~c~~~~--iplI~~g  123 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD-------NIIARRYVNGMLIFLI--VPLIESG  123 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEc
Confidence            54443 457889999998764       3444455666676666  3455443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.73  E-value=0.0011  Score=46.37  Aligned_cols=96  Identities=19%  Similarity=0.267  Sum_probs=60.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++.|.|+ |.+|..++..|+..|  .++.++++++........+...... .........   +.    +.++++|+++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCCCCEEE
Confidence            47999997 999999999999998  6899999987332222222221110 011222222   22    3478899999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhC
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+++...-        ...|..-.+.+++.+.+.+
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~  107 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA  107 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99985321        2335666677777777776

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.73  E-value=0.00038  Score=48.27  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=48.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++|.|+ |+.+++++..|...| .+++++.|++... +...+..+.+... .......++.+.+.+...+.++|+||
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~-~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFF-DKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHH-HHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            578999996 777999999999988 5899999986211 1112222222211 11111122222333555667899999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      |+.+
T Consensus       202 NaTp  205 (288)
T PRK12749        202 NGTK  205 (288)
T ss_pred             ECCC
Confidence            9764

>PLN02602 lactate dehydrogenase

Probab=97.72  E-value=0.0016  Score=46.40  Aligned_cols=106  Identities=18%  Similarity=0.203  Sum_probs=65.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+.|+|+ |.+|..++..|+..+  .++.+++.++........+....... ....+...  .+   .. .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---y~-~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS--TD---YA-VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC--CC---HH-HhCCCCEEE
Confidence            58999996 999999999998877  47899998764333333333322111 11222221  12   22 378899999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+||..+        ....|..-.+.+++.+.+.++-..++.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998542        12345666677888887776323344444

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.71  E-value=0.0012  Score=43.52  Aligned_cols=68  Identities=21%  Similarity=0.198  Sum_probs=45.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |++.|.| +|.+|..++..|...|++|++-.|+.++    ............        -...+...+.+.+|+|+-..
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~----~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK----ALAAAAAALGPL--------ITGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh----HHHHHHHhhccc--------cccCChHHHHhcCCEEEEec
Confidence            5566665 7999999999999999999988666632    222222211222        22344566777899888877


Q ss_pred             c
Q 033236           84 S   84 (124)
Q Consensus        84 ~   84 (124)
                      +
T Consensus        69 P   69 (211)
T COG2085          69 P   69 (211)
T ss_pred             c
Confidence            6

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.71  E-value=0.0027  Score=44.80  Aligned_cols=106  Identities=15%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++.|+|+ |.+|..++..++..| .++.+++.++........+......  .....+...  .|   + +.++++|+|
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiV   78 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVV   78 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEE
Confidence            357999995 999999999999888 4899999987543222333222211  112222221  12   3 356899999


Q ss_pred             EEeCcccc-------------ceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      |.++|...             ....|..-.+.+++.+.+.. .+ .++..|
T Consensus        79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~s  128 (321)
T PTZ00082         79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVIT  128 (321)
T ss_pred             EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence            99997532             12345666677788887776 34 455555

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.71  E-value=0.00053  Score=47.89  Aligned_cols=35  Identities=23%  Similarity=0.405  Sum_probs=31.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|++.|.|+ |.+|.+++..|.+.|++|++.+|++
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4678999985 9999999999999999999999876

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.70  E-value=0.00089  Score=46.83  Aligned_cols=108  Identities=15%  Similarity=0.106  Sum_probs=63.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      |++.|.|+ |.+|..++..++..|. +|++++.++.-......+..+.......   ...+.-..++.. ++++|+||.+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~---~~~i~~t~d~~~-~~~aDiVIit   76 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGF---DTKVTGTNNYAD-TANSDIVVIT   76 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCC---CcEEEecCCHHH-hCCCCEEEEc
Confidence            67999996 9999999999999875 8999998653211111112111111111   111211122333 5789999999


Q ss_pred             Cccccc--------eecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           83 ISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        83 a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +|...-        ...|..-.+.+++.+.+.++-..++..|
T Consensus        77 ag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        77 AGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            984321        1256677777888887776222344444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=97.70  E-value=0.0012  Score=47.72  Aligned_cols=103  Identities=18%  Similarity=0.198  Sum_probs=63.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+|+|.|+ |++|..+++.|+..|. ++++++.+.-+                  ..+...+.+..+. .-+++.+..+
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  120 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFR  120 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEecc
Confidence            467999985 9999999999999994 77777755210                  1111112222222 1235556666


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ .+...++++++|+|+.+..       |...-..+-++|.+.+  ..+|+.+
T Consensus       121 i~-~~~~~~~~~~~D~Vvd~~d-------~~~~r~~ln~~~~~~~--~p~v~~~  164 (392)
T PRK07878        121 LD-PSNAVELFSQYDLILDGTD-------NFATRYLVNDAAVLAG--KPYVWGS  164 (392)
T ss_pred             CC-hhHHHHHHhcCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEE
Confidence            54 4556778899999998764       2333334667777776  3455543

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=97.70  E-value=0.0003  Score=52.24  Aligned_cols=80  Identities=20%  Similarity=0.123  Sum_probs=48.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH--H----HhhhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL--Q----MLLSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~--~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      .|+|.|.| +|.+|..++..|++.|++|++.++++...+....  +    ....+..... ...+.+.-.+++..+++++
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~g~i~~~~~~~ea~~~a   81 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPL-PPEGRLTFCASLAEAVAGA   81 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchh-hhhhceEeeCCHHHHhcCC
Confidence            36899998 5999999999999999999999998722111000  0    0000000000 0001122234566778899


Q ss_pred             CEEEEeCc
Q 033236           77 DVVICTIS   84 (124)
Q Consensus        77 d~vi~~a~   84 (124)
                      |+|+-+..
T Consensus        82 D~Vieavp   89 (495)
T PRK07531         82 DWIQESVP   89 (495)
T ss_pred             CEEEEcCc
Confidence            99998776

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.68  E-value=0.00013  Score=50.46  Aligned_cols=36  Identities=22%  Similarity=0.386  Sum_probs=32.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |..+++.|.|+ |.+|..++..|+..|++|++.++++
T Consensus         1 ~~i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (291)
T PRK06035          1 MDIKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE   36 (291)
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            55578999985 9999999999999999999999987

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.68  E-value=0.0004  Score=49.76  Aligned_cols=68  Identities=24%  Similarity=0.371  Sum_probs=53.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|.|+ |.+|+.++.+..+.|++|++++.++..+...    .      .-..+.+|+.|++.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~----~------ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ----V------ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH----h------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            368999996 8999999999999999999998876322110    0      113666889999999999999998754

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.67  E-value=0.00075  Score=48.50  Aligned_cols=35  Identities=31%  Similarity=0.541  Sum_probs=31.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++.|.||.|.+|..++..|.+.|+.|++.+|++
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            36899999899999999999999999999999864

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.67  E-value=0.00026  Score=48.93  Aligned_cols=33  Identities=30%  Similarity=0.494  Sum_probs=30.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|.|.|+ |.+|..++..|++.|++|++.++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~   34 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQ   34 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCH
Confidence            57899996 9999999999999999999999987

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.66  E-value=0.00054  Score=48.30  Aligned_cols=98  Identities=20%  Similarity=0.263  Sum_probs=56.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccC--ChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFA--DHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~--~~~~~~~~~~~~d   77 (124)
                      +++++.|.||+|+.|..+++.|.... .++...+.+...- ....+.     .++.. .+...+.  +++.+  ..+++|
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g-~~~~~~-----~p~l~g~~~l~~~~~~~~~~--~~~~~D   72 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAG-KPVSDV-----HPNLRGLVDLPFQTIDPEKI--ELDECD   72 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcC-CchHHh-----CcccccccccccccCChhhh--hcccCC
Confidence            35789999999999999999999886 5665554433100 011111     11111 1112222  22222  445699


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +||.+.+.        .....++..+...+ + ++|-.|.
T Consensus        73 vvFlalPh--------g~s~~~v~~l~~~g-~-~VIDLSa  102 (349)
T COG0002          73 VVFLALPH--------GVSAELVPELLEAG-C-KVIDLSA  102 (349)
T ss_pred             EEEEecCc--------hhHHHHHHHHHhCC-C-eEEECCc
Confidence            99998762        22456666776666 3 4666663

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.65  E-value=0.0003  Score=48.70  Aligned_cols=74  Identities=16%  Similarity=0.259  Sum_probs=46.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccC-Ce-EEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ-GA-HLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++++|.|+ |+.|++++..|.+.| .+++++.|+.    +...+..+.+... +. .....+   ..++......+|+|
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~----~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~div  198 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT----SRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGV  198 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH----HHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEE
Confidence            468999996 999999999999999 4788999986    2222222222111 11 111122   22333344678999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ||+.+
T Consensus       199 INaTp  203 (283)
T PRK14027        199 VNATP  203 (283)
T ss_pred             EEcCC
Confidence            99764

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=97.63  E-value=0.0012  Score=45.48  Aligned_cols=71  Identities=17%  Similarity=0.182  Sum_probs=42.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC--CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+++++.|.| .|.+|+.+++.|.+.  ++++..+ +|++     .+.+....  ..+...   -..+   ++++++++|
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~-----~~a~~~a~--~~g~~~---~~~~---~eell~~~D   69 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDP-----QRHADFIW--GLRRPP---PVVP---LDQLATHAD   69 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCH-----HHHHHHHH--hcCCCc---ccCC---HHHHhcCCC
Confidence            4567899998 599999999999863  6788755 4544     22221111  011000   0123   344456789


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +|+-+++.
T Consensus        70 ~Vvi~tp~   77 (271)
T PRK13302         70 IVVEAAPA   77 (271)
T ss_pred             EEEECCCc
Confidence            98888864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.62  E-value=0.00046  Score=48.36  Aligned_cols=73  Identities=26%  Similarity=0.335  Sum_probs=51.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|.|+ |.+|..+++.|...| .+|++++|++    +........+.   ...     .+.+++.+.+.++|+||
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~----~ra~~la~~~g---~~~-----~~~~~~~~~l~~aDvVi  243 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY----ERAEELAKELG---GNA-----VPLDELLELLNEADVVI  243 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHcC---CeE-----EeHHHHHHHHhcCCEEE
Confidence            3678999996 999999999998866 7899999986    22222222221   122     23346777788899999


Q ss_pred             EeCcccc
Q 033236           81 CTISGVH   87 (124)
Q Consensus        81 ~~a~~~~   87 (124)
                      .+.+...
T Consensus       244 ~at~~~~  250 (311)
T cd05213         244 SATGAPH  250 (311)
T ss_pred             ECCCCCc
Confidence            9988533

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.61  E-value=0.002  Score=44.76  Aligned_cols=94  Identities=19%  Similarity=0.245  Sum_probs=58.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH---h--cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA---V--KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~--~~~d   77 (124)
                      +.+++|+|+++.+|..+++.+...|.+++++++++     ...+.+...   ... ...|..+.+....+   .  .++|
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE-----DKLERAKEL---GAD-YVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHc---CCC-eEEecCChHHHHHHHHHhCCCCCc
Confidence            45799999999999999999999999999888876     222222221   111 12344444433332   2  2589


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+++++|.        ......++.+.+.|   +++.++
T Consensus       238 ~~i~~~g~--------~~~~~~~~~l~~~G---~~v~~~  265 (342)
T cd08266         238 VVVEHVGA--------ATWEKSLKSLARGG---RLVTCG  265 (342)
T ss_pred             EEEECCcH--------HHHHHHHHHhhcCC---EEEEEe
Confidence            99999873        12234445554433   666665

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.61  E-value=0.00039  Score=48.17  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=32.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+.+++.|.|+ |..|..++..|++.|++|++.++++
T Consensus         2 ~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (292)
T PRK07530          2 MAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA   37 (292)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            34578999985 9999999999999999999999987

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.61  E-value=0.001  Score=48.24  Aligned_cols=71  Identities=27%  Similarity=0.357  Sum_probs=55.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ..++++|.|+ |-+|.-++++|.++| .+|++..|+.    +...+....+.        +++...+++...+..+|+||
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~----erA~~La~~~~--------~~~~~l~el~~~l~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTL----ERAEELAKKLG--------AEAVALEELLEALAEADVVI  243 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCH----HHHHHHHHHhC--------CeeecHHHHHHhhhhCCEEE
Confidence            3578999996 999999999999999 7888889987    23333333222        55666788999999999999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      .+.+.
T Consensus       244 ssTsa  248 (414)
T COG0373         244 SSTSA  248 (414)
T ss_pred             EecCC
Confidence            98774

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.60  E-value=0.00085  Score=46.18  Aligned_cols=107  Identities=19%  Similarity=0.105  Sum_probs=65.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      -++.|.||+|+||+.+...|-...  .+..+.+-...+-......      +-+-.......+-++.+.++++++|+|+.
T Consensus        29 ~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlS------HI~T~s~V~g~~g~~~L~~al~~advVvI  102 (345)
T KOG1494|consen   29 LKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLS------HINTNSSVVGFTGADGLENALKGADVVVI  102 (345)
T ss_pred             ceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccc------ccCCCCceeccCChhHHHHHhcCCCEEEe
Confidence            479999999999999966554332  2334444332111111111      11112233345557799999999999999


Q ss_pred             eCccc--------cceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGV--------HFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      -||.-        +.+..|..-.+.+..++.+.-+-.++.++|
T Consensus       103 PAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  103 PAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             cCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            99854        346677777788888887764233444555

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.60  E-value=0.00093  Score=46.26  Aligned_cols=33  Identities=27%  Similarity=0.448  Sum_probs=30.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.|+ |.+|..++..|.+.|++|++++|++
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG   33 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence            47999996 9999999999999999999999975

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.60  E-value=0.0021  Score=43.78  Aligned_cols=91  Identities=25%  Similarity=0.357  Sum_probs=62.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+|+|.|||+- |+.++..|.+.|+ |++..-.+.+     .+.. ........+..+-+.+.+.+.++++  +++.||.
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g-----~~~~-~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID   72 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYG-----GELL-KPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID   72 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhh-----Hhhh-ccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            78999999876 8999999999998 6555444311     1111 1112456788888889999999986  5999998


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ..-|+.     ..-+.++.++|.+.|
T Consensus        73 ATHPfA-----~~is~na~~a~~~~~   93 (249)
T PF02571_consen   73 ATHPFA-----AEISQNAIEACRELG   93 (249)
T ss_pred             CCCchH-----HHHHHHHHHHHhhcC
Confidence            776543     233455666665555

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK07877 hypothetical protein; Provisional

Probab=97.59  E-value=0.0017  Score=50.37  Aligned_cols=102  Identities=14%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCC-----------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIG-----------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~-----------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+|+|.|. | +|+.++..|+..|.  ++++++.+.-+                 +.....+++..+. .-+++.+...
T Consensus       107 ~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~  184 (722)
T PRK07877        107 RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDG  184 (722)
T ss_pred             cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999998 7 99999999999984  78888765210                 1111112222222 3356777777


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++ ++.+.++++++|+|+.|..       |...-..+-++|.+.+  ..+|+-+
T Consensus       185 i~-~~n~~~~l~~~DlVvD~~D-------~~~~R~~ln~~a~~~~--iP~i~~~  228 (722)
T PRK07877        185 LT-EDNVDAFLDGLDVVVEECD-------SLDVKVLLREAARARR--IPVLMAT  228 (722)
T ss_pred             CC-HHHHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEc
Confidence            75 7889999999999999886       2333344557777777  3566555

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.58  E-value=0.001  Score=46.13  Aligned_cols=31  Identities=29%  Similarity=0.463  Sum_probs=28.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r   35 (124)
                      |++.|.|+ |.+|..++..|.+.|++|++++|
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence            57999985 99999999999999999999999

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.58  E-value=0.0013  Score=46.49  Aligned_cols=74  Identities=27%  Similarity=0.435  Sum_probs=47.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d   77 (124)
                      +.+++|+||+|++|...++.+...|..+++++.++     .+.+.+..   .+...+ .|+.+.   +.+.++..  ++|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~-----~k~~~~~~---lGAd~v-i~y~~~~~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS-----EKLELLKE---LGADHV-INYREEDFVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-----HHHHHHHh---cCCCEE-EcCCcccHHHHHHHHcCCCCce
Confidence            46899999999999999999999997666666554     22222322   222211 123332   34444443  499


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +|+...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99999883

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.56  E-value=0.0016  Score=46.18  Aligned_cols=33  Identities=27%  Similarity=0.400  Sum_probs=27.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP   36 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~   36 (124)
                      +++.|+|++|++|+.+++.|.+.+ .++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999998876 688777444

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.56  E-value=0.00051  Score=44.27  Aligned_cols=67  Identities=22%  Similarity=0.243  Sum_probs=45.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .++++.|.| .|.||+.+++.+..-|++|++.+|+.    ....    ......+        ...+++++++++|+|++
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~----~~~~----~~~~~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP----KPEE----GADEFGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC----HHHH----HHHHTTE--------EESSHHHHHHH-SEEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC----Chhh----hcccccc--------eeeehhhhcchhhhhhh
Confidence            468999998 59999999999999999999999998    1111    0111111        12346667777888888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus        98 ~~pl  101 (178)
T PF02826_consen   98 HLPL  101 (178)
T ss_dssp             -SSS
T ss_pred             hhcc
Confidence            7763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.55  E-value=0.00058  Score=47.68  Aligned_cols=33  Identities=15%  Similarity=0.365  Sum_probs=30.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|.|.|+ |.+|..++..|++.|++|+++++++
T Consensus         5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            57999985 9999999999999999999999886

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.55  E-value=0.0025  Score=44.78  Aligned_cols=73  Identities=22%  Similarity=0.265  Sum_probs=46.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHh-cccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAV-KRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~   78 (124)
                      .+++|+|++|.+|...++.+...|. +|+++++++     .+.+.+..  ..++..+ .|..+.   +.+.++. .++|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~-----~~~~~~~~--~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~  227 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD-----EKCQLLKS--ELGFDAA-INYKTDNVAERLRELCPEGVDV  227 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH-----HHHHHHHH--hcCCcEE-EECCCCCHHHHHHHHCCCCceE
Confidence            6899999999999999988888898 799888876     22222221  1222221 222222   3333332 35899


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      ++.+.|
T Consensus       228 vid~~g  233 (345)
T cd08293         228 YFDNVG  233 (345)
T ss_pred             EEECCC
Confidence            999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.54  E-value=0.0015  Score=44.92  Aligned_cols=74  Identities=22%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH---HHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS---LVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~d   77 (124)
                      +++++|+|++|.+|..+++.+...|.+|+++++++     ...+.+..+   ++.. ..|..+++.   +.+...  ++|
T Consensus       145 g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         145 GETVLVHGGSGAVGHAAVQLARWAGARVIATASSA-----EGAELVRQA---GADA-VFNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHc---CCCE-EEeCCCcCHHHHHHHHcCCCceE
Confidence            56899999999999999999989999999988876     223333222   2221 133444333   333332  589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      .++++++.
T Consensus       216 ~vi~~~~~  223 (325)
T cd08253         216 VIIEVLAN  223 (325)
T ss_pred             EEEECCch
Confidence            99998873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02928 oxidoreductase family protein

Probab=97.54  E-value=0.00052  Score=48.85  Aligned_cols=79  Identities=16%  Similarity=0.124  Sum_probs=50.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .++++.|.|. |.||+.+++.|..-|++|++.+|+....   ..... ..+......+........++.++++++|+|+.
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl  232 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSE---PEDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL  232 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChh---hhhhh-ccccccccccccccCcccCHHHHHhhCCEEEE
Confidence            4688999995 9999999999999999999998864110   00000 00011111111111145678899999999998


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       233 ~lPl  236 (347)
T PLN02928        233 CCTL  236 (347)
T ss_pred             CCCC
Confidence            8763

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.54  E-value=0.0028  Score=46.51  Aligned_cols=106  Identities=13%  Similarity=0.054  Sum_probs=69.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-------CC--eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-------GH--ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~   72 (124)
                      -+|.|+|++|.+|.+++..|+..       +.  ++..++++.+..+....+.......  .++.+ ..+  +    -+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~----ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--P----YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--C----HHH
Confidence            37899999999999999999887       63  7888888875554444444433211  12211 121  2    356


Q ss_pred             hcccCEEEEeCcccc--------ceecchHHHHHHHHHHHH-hCCccEEEEec
Q 033236           73 VKRVDVVICTISGVH--------FRSHNILMQLKLVDAIRE-AGNVKKRKLNE  116 (124)
Q Consensus        73 ~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~i~~s  116 (124)
                      ++++|+||..+|..+        ..+.|..-.+.+.+.+.+ .++-..+|.+|
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            778999999998532        234567778888888888 45223444444

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.53  E-value=0.0017  Score=45.20  Aligned_cols=73  Identities=21%  Similarity=0.298  Sum_probs=47.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHh-cccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAV-KRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~   78 (124)
                      +.+++|+||+|.+|..+++.+...|.+|+++++++     .+.+.+..   .++..+ .|..++   +.+.++. .++|+
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~-----~~~~~l~~---~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~  214 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD-----DKVAWLKE---LGFDAV-FNYKTVSLEEALKEAAPDGIDC  214 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---cCCCEE-EeCCCccHHHHHHHHCCCCcEE
Confidence            46899999999999999998888999999888876     33333332   222211 233322   2333332 25899


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      ++.+.|
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.53  E-value=0.00072  Score=46.58  Aligned_cols=36  Identities=22%  Similarity=0.366  Sum_probs=32.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~   37 (124)
                      |+.|++.+.| +|.+|.++++.|++.|    ++|++.+|++
T Consensus         1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~   40 (279)
T PRK07679          1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN   40 (279)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence            7889999998 6999999999999987    7888888865

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.53  E-value=0.0011  Score=47.94  Aligned_cols=108  Identities=19%  Similarity=0.155  Sum_probs=57.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeE-E---EEcccCChHHHHHHhcc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAH-L---IEASFADHRSLVEAVKR   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~---~~~D~~~~~~~~~~~~~   75 (124)
                      |+|.|.| .|++|..++..++ .|++|+++++++     .+.+.+..-.    .+.++ .   ..+.++...+...+.++
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~-----~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~   73 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILP-----SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRD   73 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCH-----HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcC
Confidence            4688998 5999999997666 599999999997     2222221100    00100 0   01111111223445578


Q ss_pred             cCEEEEeCccc-cc--eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           76 VDVVICTISGV-HF--RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        76 ~d~vi~~a~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +|++|-+.+.. +.  ...+......+++.+.+.. ...++...|+.
T Consensus        74 ad~vii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~-~g~lVV~~STv  119 (388)
T PRK15057         74 ADYVIIATPTDYDPKTNYFNTSSVESVIKDVVEIN-PYAVMVIKSTV  119 (388)
T ss_pred             CCEEEEeCCCCCccCCCCcChHHHHHHHHHHHhcC-CCCEEEEeeec
Confidence            99999988743 11  1234445555555554433 23444444443

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.53  E-value=0.0014  Score=46.90  Aligned_cols=92  Identities=17%  Similarity=0.185  Sum_probs=54.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++.|.||+|++|+.+++.++++ ..+   +..+..+.++      .....+....  ....+..+++.    ++++|++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg------~~~~~f~g~~--~~v~~~~~~~~----~~~~Div   69 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG------GAAPSFGGKE--GTLQDAFDIDA----LKKLDII   69 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC------CcccccCCCc--ceEEecCChhH----hcCCCEE
Confidence            68999999999999999966554 455   5554443211      1112222222  22233334443    3679999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      +.++|        ......+...+.+.| .+ .+|-.|
T Consensus        70 f~a~~--------~~~s~~~~~~~~~aG-~~~~VID~S   98 (369)
T PRK06598         70 ITCQG--------GDYTNEVYPKLRAAG-WQGYWIDAA   98 (369)
T ss_pred             EECCC--------HHHHHHHHHHHHhCC-CCeEEEECC
Confidence            99887        223566677776677 33 344444

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.52  E-value=0.00047  Score=51.68  Aligned_cols=34  Identities=18%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+|+ |++|++++..|++.|++|+++.|+.
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~  412 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY  412 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            578999997 8999999999999999999988875

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.52  E-value=0.004  Score=44.88  Aligned_cols=92  Identities=17%  Similarity=0.277  Sum_probs=62.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---------   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------   74 (124)
                      +++.|.| -|++|..++-.++++|++|+.++-++        ...+.+......+.+.|  ..+.++++.+         
T Consensus        10 ~~I~ViG-LGYVGLPlA~~fA~~G~~ViG~DIn~--------~~Vd~ln~G~~~i~e~~--~~~~v~~~v~~g~lraTtd   78 (436)
T COG0677          10 ATIGVIG-LGYVGLPLAAAFASAGFKVIGVDINQ--------KKVDKLNRGESYIEEPD--LDEVVKEAVESGKLRATTD   78 (436)
T ss_pred             eEEEEEc-cccccHHHHHHHHHcCCceEeEeCCH--------HHHHHHhCCcceeecCc--HHHHHHHHHhcCCceEecC
Confidence            6788998 59999999999999999999999997        33434443433344333  3333444432         


Q ss_pred             -----ccCEEEEeCcc-c-cceecchHHHHHHHHHHHHh
Q 033236           75 -----RVDVVICTISG-V-HFRSHNILMQLKLVDAIREA  106 (124)
Q Consensus        75 -----~~d~vi~~a~~-~-~~~~~~~~~~~~~~~~~~~~  106 (124)
                           .+|+.+.|.+. . .+.+++.....+.++...+.
T Consensus        79 ~~~l~~~dv~iI~VPTPl~~~~~pDls~v~~aa~sIa~~  117 (436)
T COG0677          79 PEELKECDVFIICVPTPLKKYREPDLSYVESAARSIAPV  117 (436)
T ss_pred             hhhcccCCEEEEEecCCcCCCCCCChHHHHHHHHHHHHh
Confidence                 37988888752 2 34567777777777766654

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=97.52  E-value=0.0014  Score=45.88  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=48.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .++.|.|++|+.|..+++.|.+.. .++..+.-++.                      .+   +.+..++++++|++|.+
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~---~~~~~~~~~~~D~vFla   56 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KD---AAERAKLLNAADVAILC   56 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cC---cCCHhHhhcCCCEEEEC
Confidence            478999999999999999999886 56655543330                      01   11233455678888777


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+.        .....+++.+.+.+  .++|-.|
T Consensus        57 lp~--------~~s~~~~~~~~~~g--~~VIDlS   80 (310)
T TIGR01851        57 LPD--------DAAREAVSLVDNPN--TCIIDAS   80 (310)
T ss_pred             CCH--------HHHHHHHHHHHhCC--CEEEECC
Confidence            651        22344555554455  3566555

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.52  E-value=0.00025  Score=48.91  Aligned_cols=36  Identities=28%  Similarity=0.511  Sum_probs=32.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+.+++.|.|+ |.+|..++..++..|++|+++++++
T Consensus         1 ~~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~   36 (282)
T PRK05808          1 MGIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD   36 (282)
T ss_pred             CCccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence            56678999985 9999999999999999999999887

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.52  E-value=0.0015  Score=43.07  Aligned_cols=35  Identities=26%  Similarity=0.403  Sum_probs=31.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++|.|| |.+|...++.|++.|++|+++.+..
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999996 9999999999999999999987653

>PRK07411 hypothetical protein; Validated

Probab=97.52  E-value=0.0036  Score=45.32  Aligned_cols=102  Identities=17%  Similarity=0.162  Sum_probs=63.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+|+|.| +|++|..+++.|+..| -++++++.+.-+                  ......+.+..+. .-+++.+...
T Consensus        38 ~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~  116 (390)
T PRK07411         38 AASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETR  116 (390)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecc
Confidence            45799998 5999999999999999 577777755210                  1111122232222 2245666665


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ++ ++...+++++.|+|+.+...       ...-..+-++|.+.+  ..+|+.
T Consensus       117 ~~-~~~~~~~~~~~D~Vvd~~d~-------~~~r~~ln~~~~~~~--~p~v~~  159 (390)
T PRK07411        117 LS-SENALDILAPYDVVVDGTDN-------FPTRYLVNDACVLLN--KPNVYG  159 (390)
T ss_pred             cC-HHhHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC--CCEEEE
Confidence            54 45667788999999998762       222334556777666  344443

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.51  E-value=0.003  Score=44.77  Aligned_cols=71  Identities=31%  Similarity=0.436  Sum_probs=52.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|+|+ |++|...++.....|.+|++++|++     .+.+...+   .+.. ++...  |++.+..+.+.+|+++.
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~-----~K~e~a~~---lGAd~~i~~~--~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSE-----EKLELAKK---LGADHVINSS--DSDALEAVKEIADAIID  235 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCCh-----HHHHHHHH---hCCcEEEEcC--CchhhHHhHhhCcEEEE
Confidence            568999997 5999999988888999999999998     33333333   2333 33332  66666666666999999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +++
T Consensus       236 tv~  238 (339)
T COG1064         236 TVG  238 (339)
T ss_pred             CCC
Confidence            988

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.51  E-value=0.00023  Score=49.49  Aligned_cols=33  Identities=24%  Similarity=0.452  Sum_probs=30.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++.+.| .|.+|..++..|++.|++|++.+|++
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~   34 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNP   34 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            4788998 59999999999999999999999987

>PLN00203 glutamyl-tRNA reductase

Probab=97.50  E-value=0.00082  Score=50.21  Aligned_cols=73  Identities=23%  Similarity=0.444  Sum_probs=50.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|.|+ |.+|..+++.|...|. +|+++.|+.    .........+.  +..+.   +...+++..++.++|+||.
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~----era~~La~~~~--g~~i~---~~~~~dl~~al~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSE----ERVAALREEFP--DVEII---YKPLDEMLACAAEADVVFT  335 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHHhC--CCceE---eecHhhHHHHHhcCCEEEE
Confidence            578999997 9999999999999995 799999987    22222222221  22211   2233456677889999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            8763

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.50  E-value=0.00056  Score=41.83  Aligned_cols=34  Identities=26%  Similarity=0.488  Sum_probs=28.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEe-CCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ-RPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~-r~~   37 (124)
                      .+++.|+|+ |.+|.++++.|.+.|+.|..+. |++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            468999996 9999999999999999998874 443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=97.49  E-value=0.0034  Score=46.47  Aligned_cols=33  Identities=18%  Similarity=0.338  Sum_probs=30.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++.|.| .|-.|..++..|++.|++|.+.+|++
T Consensus         2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~   34 (470)
T PTZ00142          2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRTY   34 (470)
T ss_pred             CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            4789998 59999999999999999999999987

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=97.49  E-value=0.0039  Score=42.13  Aligned_cols=103  Identities=17%  Similarity=0.198  Sum_probs=66.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhccCCeEEEE-cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFKKQGAHLIE-AS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~D   62 (124)
                      ..+++|.|. |++|++.++.|++.| -++++++.+.-.                  ..+...++...+ .+..++.. -|
T Consensus        30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-nP~c~V~~~~~  107 (263)
T COG1179          30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-NPECEVTAIND  107 (263)
T ss_pred             hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-CCCceEeehHh
Confidence            357899985 999999999999999 477777755310                  000111112111 23444333 34


Q ss_pred             cCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .-.++.+..++. +.|+||-+..       ++..-..++..|.+++ . .+|-+.
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD-------~v~~Kv~Li~~c~~~k-i-~vIss~  153 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAID-------SVRAKVALIAYCRRNK-I-PVISSM  153 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchh-------hhHHHHHHHHHHHHcC-C-CEEeec
Confidence            567888888876 4999998774       3555567888998887 3 444443

>PRK14851 hypothetical protein; Provisional

Probab=97.49  E-value=0.0026  Score=49.03  Aligned_cols=104  Identities=16%  Similarity=0.127  Sum_probs=65.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+|+|.| .|++|..++..|+..|. ++++++.+.-+                  +.+...+.+..+. .-+++.+...
T Consensus        43 ~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~  121 (679)
T PRK14851         43 EAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAG  121 (679)
T ss_pred             cCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            56899998 59999999999999994 67777644200                  1111112222222 3356777777


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ++ ++.+..+++++|+||.+....     ....-..+.+.|.+.+ + .+|..
T Consensus       122 i~-~~n~~~~l~~~DvVid~~D~~-----~~~~r~~l~~~c~~~~-i-P~i~~  166 (679)
T PRK14851        122 IN-ADNMDAFLDGVDVVLDGLDFF-----QFEIRRTLFNMAREKG-I-PVITA  166 (679)
T ss_pred             CC-hHHHHHHHhCCCEEEECCCCC-----cHHHHHHHHHHHHHCC-C-CEEEe
Confidence            74 567888999999999777521     1222345667787776 3 34443

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.49  E-value=0.0013  Score=46.61  Aligned_cols=93  Identities=13%  Similarity=0.142  Sum_probs=54.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      +.+++.|.||+|++|..+++.|.++.   .++..+....+.-     +... +....+.+-  ++   +.  ..++++|+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG-----~~~~-~~~~~~~v~--~~---~~--~~~~~~Dv   69 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAG-----ETLR-FGGKSVTVQ--DA---AE--FDWSQAQL   69 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCC-----ceEE-ECCcceEEE--eC---ch--hhccCCCE
Confidence            45789999999999999999999843   4665554433110     0000 111111111  22   11  22367899


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +|.+++        ......+++.+.+.|  .++|-.|+
T Consensus        70 vf~a~p--------~~~s~~~~~~~~~~g--~~VIDlS~   98 (336)
T PRK08040         70 AFFVAG--------REASAAYAEEATNAG--CLVIDSSG   98 (336)
T ss_pred             EEECCC--------HHHHHHHHHHHHHCC--CEEEECCh
Confidence            999887        223556666666666  35666654

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.49  E-value=0.0054  Score=41.28  Aligned_cols=70  Identities=21%  Similarity=0.387  Sum_probs=43.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC----eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH----ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      +.+++.|.| +|.+|.+++..|.+.+.    ++++..|+.    ..+.+....  ..++...       .+..++++++|
T Consensus         3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~----~~~~~~~~~--~~~~~~~-------~~~~~~~~~~D   68 (245)
T PRK07634          3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSN----VEKLDQLQA--RYNVSTT-------TDWKQHVTSVD   68 (245)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCC----HHHHHHHHH--HcCcEEe-------CChHHHHhcCC
Confidence            367899998 59999999999988762    255666643    122222211  1122211       12344567899


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +|+.+..+
T Consensus        69 iViiavp~   76 (245)
T PRK07634         69 TIVLAMPP   76 (245)
T ss_pred             EEEEecCH
Confidence            99998874

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.49  E-value=0.00093  Score=47.56  Aligned_cols=74  Identities=24%  Similarity=0.350  Sum_probs=49.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~   78 (124)
                      ++.++|.||+|++|++.++.....+...++..++.     +..+..+.+.    .-...|+.+++..+...+    ++|+
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~-----e~~~l~k~lG----Ad~vvdy~~~~~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK-----EKLELVKKLG----ADEVVDYKDENVVELIKKYTGKGVDV  228 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc-----chHHHHHHcC----CcEeecCCCHHHHHHHHhhcCCCccE
Confidence            56899999999999999999888884334444444     2223333322    133457777655555544    4999


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      |+.|.|.
T Consensus       229 VlD~vg~  235 (347)
T KOG1198|consen  229 VLDCVGG  235 (347)
T ss_pred             EEECCCC
Confidence            9999985

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.48  E-value=0.0018  Score=44.65  Aligned_cols=33  Identities=30%  Similarity=0.467  Sum_probs=30.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.|.| .|.+|..++..|.+.|++|.+.+|++
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4788998 69999999999999999999999886

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.48  E-value=0.0033  Score=43.80  Aligned_cols=33  Identities=24%  Similarity=0.420  Sum_probs=30.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.+.| .|.+|..+++.|++.|++|.+.+|++
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~   33 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNP   33 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCH
Confidence            4788998 59999999999999999999999986

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.48  E-value=0.00082  Score=49.03  Aligned_cols=72  Identities=25%  Similarity=0.308  Sum_probs=49.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |.+|..+++.|...|. +|++..|++    .........+.   .     +..+.+++...+.++|+||
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~----~ra~~la~~~g---~-----~~~~~~~~~~~l~~aDvVI  247 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL----ERAEELAEEFG---G-----EAIPLDELPEALAEADIVI  247 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH----HHHHHHHHHcC---C-----cEeeHHHHHHHhccCCEEE
Confidence            3578999986 9999999999999895 889999986    12122222211   1     2223356677778899999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      .+.+..
T Consensus       248 ~aT~s~  253 (423)
T PRK00045        248 SSTGAP  253 (423)
T ss_pred             ECCCCC
Confidence            988743

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.48  E-value=0.0023  Score=47.74  Aligned_cols=74  Identities=27%  Similarity=0.393  Sum_probs=50.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-------------H--
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-------------R--   67 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~--   67 (124)
                      +.+++|+|+ |.+|...+..+...|.+|+++++++     .+.+..+.   .+.+++..|..+.             +  
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~-----~rle~aes---lGA~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRP-----EVAEQVES---MGAEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH---cCCeEEEeccccccccccchhhhcchhHH
Confidence            468999995 9999999999999999999999987     33444333   3445444333221             1  


Q ss_pred             -H----HHHHhcccCEEEEeCcc
Q 033236           68 -S----LVEAVKRVDVVICTISG   85 (124)
Q Consensus        68 -~----~~~~~~~~d~vi~~a~~   85 (124)
                       .    +.+..+++|++|.+++.
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~  258 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALI  258 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCC
Confidence             1    12223469999999984

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.48  E-value=0.00068  Score=49.37  Aligned_cols=71  Identities=20%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|+|+ |.+|..+++.|...| .+|++.+|++    .........+.   ...+     +.+++.+++.++|+||.
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~----~ra~~la~~~g---~~~i-----~~~~l~~~l~~aDvVi~  246 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY----ERAEDLAKELG---GEAV-----KFEDLEEYLAEADIVIS  246 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHcC---CeEe-----eHHHHHHHHhhCCEEEE
Confidence            578999996 999999999999999 7899999986    22122222211   1222     23467777888999999


Q ss_pred             eCccc
Q 033236           82 TISGV   86 (124)
Q Consensus        82 ~a~~~   86 (124)
                      +.+..
T Consensus       247 aT~s~  251 (417)
T TIGR01035       247 STGAP  251 (417)
T ss_pred             CCCCC
Confidence            87643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.46  E-value=0.003  Score=44.12  Aligned_cols=69  Identities=26%  Similarity=0.260  Sum_probs=45.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++.|.| .|.+|..++..|.+.|+  +|++.+|++     ...+....   .++....     ..+..++++++|+||
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~-----~~~~~a~~---~g~~~~~-----~~~~~~~~~~aDvVi   71 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSA-----ETRARARE---LGLGDRV-----TTSAAEAVKGADLVI   71 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCH-----HHHHHHHh---CCCCcee-----cCCHHHHhcCCCEEE
Confidence            46899998 69999999999999884  889899886     22222211   1211000     112344567889998


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      .+.++
T Consensus        72 iavp~   76 (307)
T PRK07502         72 LCVPV   76 (307)
T ss_pred             ECCCH
Confidence            88864

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=97.46  E-value=0.0008  Score=47.82  Aligned_cols=68  Identities=25%  Similarity=0.357  Sum_probs=54.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++++.|.|+ |.+|+=++.+-.+.|+++++++-++..++..-          .-..+.++..|++.++++.+++|+|-.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v----------a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV----------ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc----------ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            378999996 99999999999999999999998774332111          114778888899999999999998865

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=97.45  E-value=0.006  Score=46.32  Aligned_cols=97  Identities=20%  Similarity=0.245  Sum_probs=68.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchH----HHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDID----KLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+|+|.| .|+.|.+++..|++.| .++.+++-+.......    ..+.... .++++.+...|.++.+++...+++.|.
T Consensus       130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~-~n~~v~v~~i~~~~~~dl~ev~~~~Di  207 (637)
T TIGR03693       130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEE-TDDALLVQEIDFAEDQHLHEAFEPADW  207 (637)
T ss_pred             ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHH-hCCCCceEeccCCcchhHHHhhcCCcE
Confidence            4799998 5999999999999999 5776765443211111    1111111 245666666677889999999999999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |++.+.     +.+......+-++|.+.|
T Consensus       208 Vi~vsD-----dy~~~~Lr~lN~acvkeg  231 (637)
T TIGR03693       208 VLYVSD-----NGDIDDLHALHAFCKEEG  231 (637)
T ss_pred             EEEECC-----CCChHHHHHHHHHHHHcC
Confidence            999887     344555677778888877

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=97.45  E-value=0.0011  Score=46.71  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=30.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +|+|.|.| +|.+|..++..|.+.|++|++++|++
T Consensus         2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence            47899998 49999999999999999999999864

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.42  E-value=0.0043  Score=42.32  Aligned_cols=36  Identities=33%  Similarity=0.546  Sum_probs=29.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeE-EEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HET-YVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v-~~~~r~~   37 (124)
                      +++++.|.|++|-.|+.+++.+.+.+ .++ -+++|.+
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            35789999999999999999998875 665 4456665

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=97.41  E-value=0.00036  Score=45.12  Aligned_cols=33  Identities=33%  Similarity=0.453  Sum_probs=28.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      ++.|.|+ |..|+.++..++..|++|++.+++++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            5789996 99999999999999999999999873

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK14852 hypothetical protein; Provisional

Probab=97.41  E-value=0.0039  Score=49.65  Aligned_cols=105  Identities=14%  Similarity=0.094  Sum_probs=66.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+|+|.| .|++|..++..|+..|. ++++++.+.-+                  ......+.+..+. .-+++.+...
T Consensus       332 ~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~  410 (989)
T PRK14852        332 RSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEG  410 (989)
T ss_pred             cCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecC
Confidence            46799998 59999999999999994 66776654200                  1111122232222 2346666665


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      + +++.+..+++++|+||.+....     ....-..+.+.|.+.+ + .+|..+
T Consensus       411 I-~~en~~~fl~~~DiVVDa~D~~-----~~~~rr~l~~~c~~~~-I-P~I~ag  456 (989)
T PRK14852        411 V-AAETIDAFLKDVDLLVDGIDFF-----ALDIRRRLFNRALELG-I-PVITAG  456 (989)
T ss_pred             C-CHHHHHHHhhCCCEEEECCCCc-----cHHHHHHHHHHHHHcC-C-CEEEee
Confidence            5 5677888999999999877532     2223356667777777 3 455444

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.40  E-value=0.001  Score=48.52  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=31.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++|+|. |.+|+.+++.+...|.+|++.++++
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp  245 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDP  245 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCc
Confidence            4688999995 9999999999999999999999887

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.40  E-value=0.0025  Score=46.70  Aligned_cols=75  Identities=13%  Similarity=0.085  Sum_probs=50.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++++++|+|. |..|..+++.|.++|++|.+.+..+....   ...++.. ..++.+..+...  +   ...++.|.||.
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~---~~~l~~~-~~gi~~~~g~~~--~---~~~~~~d~vv~   73 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPER---VAQIGKM-FDGLVFYTGRLK--D---ALDNGFDILAL   73 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchh---HHHHhhc-cCCcEEEeCCCC--H---HHHhCCCEEEE
Confidence            4678999997 78999999999999999999987663211   1112110 135666655432  1   13357899999


Q ss_pred             eCccc
Q 033236           82 TISGV   86 (124)
Q Consensus        82 ~a~~~   86 (124)
                      ..|..
T Consensus        74 spgi~   78 (445)
T PRK04308         74 SPGIS   78 (445)
T ss_pred             CCCCC
Confidence            88743

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.40  E-value=0.0006  Score=39.23  Aligned_cols=69  Identities=28%  Similarity=0.458  Sum_probs=44.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC---CeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG---HETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |+.+.| +|.+|.++++.|.+.|   ++|.+. .|++     ++......  .-++.+...      +..++.+..|+||
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~-----~~~~~~~~--~~~~~~~~~------~~~~~~~~advvi   66 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSP-----EKAAELAK--EYGVQATAD------DNEEAAQEADVVI   66 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSH-----HHHHHHHH--HCTTEEESE------EHHHHHHHTSEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcH-----HHHHHHHH--hhccccccC------ChHHhhccCCEEE
Confidence            567786 6999999999999999   999865 8887     32222211  122233322      2445556899999


Q ss_pred             EeCcccc
Q 033236           81 CTISGVH   87 (124)
Q Consensus        81 ~~a~~~~   87 (124)
                      .+..|..
T Consensus        67 lav~p~~   73 (96)
T PF03807_consen   67 LAVKPQQ   73 (96)
T ss_dssp             E-S-GGG
T ss_pred             EEECHHH
Confidence            9998644

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.39  E-value=0.00033  Score=48.46  Aligned_cols=32  Identities=22%  Similarity=0.208  Sum_probs=28.7

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +|.|.| .|.+|..++..|++.|++|++.+|++
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~   32 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGP   32 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            367887 59999999999999999999999886

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.38  E-value=0.00097  Score=46.47  Aligned_cols=36  Identities=14%  Similarity=0.271  Sum_probs=32.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|++.+.|.+|-+|+.++..|.++|+.|++..+..
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            578999999999999999999999999999986654

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=97.38  E-value=0.002  Score=35.87  Aligned_cols=34  Identities=35%  Similarity=0.664  Sum_probs=30.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG   39 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~   39 (124)
                      +++|.|| |.+|..++..|.+.|.+|+++.|++.-
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            5788885 999999999999999999999998743

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.38  E-value=0.0013  Score=46.21  Aligned_cols=66  Identities=15%  Similarity=0.273  Sum_probs=48.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .++++.|.| .|.||+.+++.|..-|++|++.+|.+...             ..+...    ...+++.++++++|+|+.
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-------------~~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-------------PGVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------CCceee----cccccHHHHHhcCCEEEE
Confidence            467899998 59999999999999999999998865110             111111    134567888888888888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       197 ~lPl  200 (312)
T PRK15469        197 LLPN  200 (312)
T ss_pred             CCCC
Confidence            7763

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.38  E-value=0.0028  Score=44.51  Aligned_cols=75  Identities=27%  Similarity=0.251  Sum_probs=54.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .++++.|+|+.| +|.--++.-...|++|++++++.    ..+.+..   +..+.+++..-..|++.++++.+..|.+++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~----~kkeea~---~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSS----KKKEEAI---KSLGADVFVDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCc----hhHHHHH---HhcCcceeEEecCCHHHHHHHHHhhcCcce
Confidence            367899999866 99877777777899999999987    2333333   345666666555588888888877776666


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      ++.
T Consensus       253 ~v~  255 (360)
T KOG0023|consen  253 TVS  255 (360)
T ss_pred             eee
Confidence            654

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.38  E-value=0.0028  Score=38.20  Aligned_cols=30  Identities=33%  Similarity=0.644  Sum_probs=25.6

Q ss_pred             eEEEEccCChhcHHHHHHHhhC-CCeEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQ-GHETYVLQ   34 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~   34 (124)
                      ++.|+|++|.+|..+++.+.+. +.++..+.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~   31 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA   31 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence            4789999999999999999884 78887773

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.37  E-value=0.0055  Score=43.65  Aligned_cols=92  Identities=22%  Similarity=0.272  Sum_probs=53.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhh-CCCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA-QGHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~-~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++.|.||+|++|+.+++.|.+ ...+   +..+....+.-     +.. .+....+.+...   +++.    ++++|+
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saG-----k~~-~~~~~~l~v~~~---~~~~----~~~~Di   71 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAG-----KTV-QFKGREIIIQEA---KINS----FEGVDI   71 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCC-----CCe-eeCCcceEEEeC---CHHH----hcCCCE
Confidence            35899999999999999999985 4555   55554332111     001 222222333333   3333    367999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      ++.+++.        .....+...+.+.|  ..+|-.|+
T Consensus        72 vf~a~~~--------~~s~~~~~~~~~~G--~~VID~Ss  100 (347)
T PRK06728         72 AFFSAGG--------EVSRQFVNQAVSSG--AIVIDNTS  100 (347)
T ss_pred             EEECCCh--------HHHHHHHHHHHHCC--CEEEECch
Confidence            9998862        23455666666666  35555553

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=97.37  E-value=0.0015  Score=49.43  Aligned_cols=71  Identities=28%  Similarity=0.384  Sum_probs=53.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++|++.|.|+ |.+|+-++++..+.|++|++++.++..+..   . .      .-+.+.+|..|.+.+.++.+++|++.
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~---~-~------AD~~~v~~~~D~~~l~~~a~~~dvIt   88 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPAS---S-V------AARHVVGSFDDRAAVREFAKRCDVLT   88 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh---h-h------CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence            45688999996 899999999999999999999887632210   0 0      11355688899999988888888875


Q ss_pred             Ee
Q 033236           81 CT   82 (124)
Q Consensus        81 ~~   82 (124)
                      ..
T Consensus        89 ~e   90 (577)
T PLN02948         89 VE   90 (577)
T ss_pred             Ee
Confidence            54

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=97.37  E-value=0.0026  Score=44.74  Aligned_cols=75  Identities=19%  Similarity=0.349  Sum_probs=53.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEE-----cccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE-----ASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~d   77 (124)
                      +++|.|.|+ |.=|.+++..|+++|++|++-.|++    +...+....  ..+..+.+     .++.-..++.++.+++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~----~~~~~i~~~--~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad   73 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDE----EIVAEINET--RENPKYLPGILLPPNLKATTDLAEALDGAD   73 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCH----HHHHHHHhc--CcCccccCCccCCcccccccCHHHHHhcCC
Confidence            368999996 7779999999999999999999997    222221111  22333333     23333467888999999


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +|+...+
T Consensus        74 ~iv~avP   80 (329)
T COG0240          74 IIVIAVP   80 (329)
T ss_pred             EEEEECC
Confidence            9888776

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.37  E-value=0.004  Score=44.17  Aligned_cols=35  Identities=14%  Similarity=0.174  Sum_probs=30.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            46899999999999999988888899988887765

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.36  E-value=0.0019  Score=47.74  Aligned_cols=74  Identities=19%  Similarity=0.136  Sum_probs=50.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|.|+ |.+|..+++.|.+.|++|+++++++...   .......+...++++..++-.+      ...++|.||.
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~---~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~   84 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER---HRALAAILEALGATVRLGPGPT------LPEDTDLVVT   84 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh---hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEE
Confidence            3568999996 9999999999999999999998765211   1111223345577776654322      3356898888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      ..|.
T Consensus        85 s~Gi   88 (480)
T PRK01438         85 SPGW   88 (480)
T ss_pred             CCCc
Confidence            7774

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.35  E-value=0.0057  Score=42.72  Aligned_cols=95  Identities=16%  Similarity=0.286  Sum_probs=59.8

Q ss_pred             EEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            6 VLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.|.|+ |++|..++..|+..|  .++.+++++.........+....... ....+..+  .+    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            357885 899999999999988  68999999873322222222211111 11222221  12    2478889999999


Q ss_pred             Ccccc--------ceecchHHHHHHHHHHHHhC
Q 033236           83 ISGVH--------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~--------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +|...        ....|..-.+.+.+.+.+.+
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~  106 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYG  106 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            98432        12346666777888888776

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.35  E-value=0.0012  Score=48.89  Aligned_cols=35  Identities=23%  Similarity=0.402  Sum_probs=31.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++|+|+ |++|++++..|.+.|++|.+..|+.
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~  365 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTK  365 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            4678999995 8999999999999999999888875

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.35  E-value=0.0019  Score=41.09  Aligned_cols=67  Identities=25%  Similarity=0.411  Sum_probs=41.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+|+++|.|= |.+|+.+++.|...|.+|++...+|    ....+..    -.+++..        .+.++....|++|.
T Consensus        22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DP----i~alqA~----~dGf~v~--------~~~~a~~~adi~vt   84 (162)
T PF00670_consen   22 AGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDP----IRALQAA----MDGFEVM--------TLEEALRDADIFVT   84 (162)
T ss_dssp             TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSH----HHHHHHH----HTT-EEE---------HHHHTTT-SEEEE
T ss_pred             CCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECCh----HHHHHhh----hcCcEec--------CHHHHHhhCCEEEE
Confidence            4688999985 9999999999999999999999987    2222211    1233322        24556666777766


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.|.
T Consensus        85 aTG~   88 (162)
T PF00670_consen   85 ATGN   88 (162)
T ss_dssp             -SSS
T ss_pred             CCCC
Confidence            6664

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=97.34  E-value=0.0054  Score=42.71  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=31.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+++|.|++|.+|..+++.+...|.+|+++++++
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~  174 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD  174 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence            46799999999999999988888899998888876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.33  E-value=0.0037  Score=41.91  Aligned_cols=73  Identities=27%  Similarity=0.370  Sum_probs=46.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH----hcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA----VKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~d~   78 (124)
                      +.+++|+|+++ +|..+++.+...|.+|+++++++     ...+.+....   ... ..|..+.+....+    -.++|.
T Consensus       135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~~g---~~~-~~~~~~~~~~~~~~~~~~~~~d~  204 (271)
T cd05188         135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD-----EKLELAKELG---ADH-VIDYKEEDLEEELRLTGGGGADV  204 (271)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH-----HHHHHHHHhC---Cce-eccCCcCCHHHHHHHhcCCCCCE
Confidence            46799999988 99999998888999999998876     2223232221   111 1233333222222    235899


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      ++++++.
T Consensus       205 vi~~~~~  211 (271)
T cd05188         205 VIDAVGG  211 (271)
T ss_pred             EEECCCC
Confidence            9998873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		3e-33
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		1e-20
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		5e-18
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		5e-18
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		5e-18
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		7e-18
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		3e-15
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		1e-13
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		7e-08

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score =  136 bits (342), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 95/119 (79%), Gaps = 2/119 (1%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KS+VL+VGGTGYIG+RIV AS++ GH TYVL RP++  +IDK+QMLL FK+ GA LIEAS
Sbjct: 4   KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63
Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE-GMIP 120
             DH+ LV+A+K+VDVVI  ++G    SH+IL QLKLV+AI+EAGN+K+   +E GM P
Sbjct: 64  LDDHQRLVDALKQVDVVISALAG-GVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 121

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 1   MG-KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKKQGAHL 58
           MG +S++L++G TGYIGR + KASL  GH T++L R      + +K Q+L SFK  GA++
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60
Query: 59  IEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
           +  S  DH SLVEAVK VDVVI T+  +   S     Q+ ++ AI+E G VK+
Sbjct: 61  VHGSIDDHASLVEAVKNVDVVISTVGSLQIES-----QVNIIKAIKEVGTVKR 108

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP+      K  +L  F+  GA +++  
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGE 66
Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +H  LVE +K+VDVVI  ++        IL Q K+++AI+ AGN+K+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAFPQ-----ILDQFKILEAIKVAGNIKR 110

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP+      K  +L  F+  GA +++  
Sbjct: 7   KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGE 62
Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +H  LVE +K+VDVVI  ++        IL Q K+++AI+ AGN+K+
Sbjct: 63  LDEHEKLVELMKKVDVVISALAFPQ-----ILDQFKILEAIKVAGNIKR 106

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP+      K  +L  F+  GA +++  
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGE 66
Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +H  LVE +K+VDVVI  ++        IL Q K+++AI+ AGN+K+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAFPQ-----ILDQFKILEAIKVAGNIKR 110

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP+      K  +L  F+  GA +++  
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGE 66
Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +H  LVE +K+VDVVI  ++   +     L Q K+++AI+ AGN+K+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAVPQY-----LDQFKILEAIKVAGNIKR 110

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL--DIDKLQMLLSFKKQGAHLIE 60
           ++K+L++G TG IGR IV AS+  G+ TY L R  I       K +++ +++  G  L+E
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
               DH +LV+A+K+VD+VIC    +         Q+K++ AI+EAGNVKK
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGRLLIED-----QVKIIKAIKEAGNVKK 107

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRP-DIGLDIDKLQMLLSFKKQGAHLIEASF 63
           K+++ GGTGYIG+ +V+ASL+  H T++  RP         +Q+   F+  G  +IE   
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65
Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
            +H  +V  +K+VD+VI  +      S     Q+ +++AI+ AGN+K+
Sbjct: 66  EEHEKMVSVLKQVDIVISALPFPMISS-----QIHIINAIKAAGNIKR 108

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           K +VL+ G TG+IG+ +  ASL     TY+L RP       K ++  + + +GA ++   
Sbjct: 10  KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG-PRSPSKAKIFKALEDKGAIIVYGL 68
Query: 63  FADHRSLVEAVK--RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             +  ++ + +K   +D+V+ T+ G      +IL Q+ LV A++  G +K+
Sbjct: 69  INEQEAMEKILKEHEIDIVVSTVGG-----ESILDQIALVKAMKAVGTIKR 114

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-37
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	7e-35
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-34
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-33
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-33
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-31
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-16
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-13
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	1e-12
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-12
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-11
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-11
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-11
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-11
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-10
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-10
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	4e-10
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-10
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-10
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-09
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-09
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-09
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-08
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	3e-08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	5e-08
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-08
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	7e-08
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-08
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-07
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-07
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	5e-07
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	6e-07
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	8e-07
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	8e-07
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-06
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-06
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-06
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	3e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	4e-06
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	5e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-05
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	4e-04
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	5e-04
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	6e-04
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	7e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	9e-04

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  126 bits (318), Expect = 5e-37
 Identities = 69/108 (63%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KS+VL+VGGTGYIG+RIV AS++ GH TYVL RP++  +IDK+QMLL FK+ GA LIEAS
Sbjct: 4   KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
             DH+ LV+A+K+VDVVI  ++G    SH+IL QLKLV+AI+EAGN+K
Sbjct: 64  LDDHQRLVDALKQVDVVISALAG-GVLSHHILEQLKLVEAIKEAGNIK 110

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  121 bits (304), Expect = 7e-35
 Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 6/112 (5%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-LDIDKLQMLLSFKKQGAHLI 59
             +S++L++G TGYIGR + KASL  GH T++L R      + +K Q+L SFK  GA+++
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 60  EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
             S  DH SLVEAVK VDVVI T+  +   S     Q+ ++ AI+E G VK+
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSLQIES-----QVNIIKAIKEVGTVKR 108

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  118 bits (297), Expect = 9e-34
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 6/110 (5%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDI-DKLQMLLSFKKQGAHLIEA 61
             K+++ GGTGYIG+ +V+ASL+  H T++  RP         +Q+   F+  G  +IE 
Sbjct: 4   MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG 63

Query: 62  SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKK 111
              +H  +V  +K+VD+VI  +      S     Q+ +++AI+ AGN+K+
Sbjct: 64  EMEEHEKMVSVLKQVDIVISALPFPMISS-----QIHIINAIKAAGNIKR 108

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  117 bits (294), Expect = 3e-33
 Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 9/108 (8%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KSK+L+ GGTGYIG  +VK SL  GH TYV  RP    +  K  +L  F+  GA +++  
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP----NSSKTTLLDEFQSLGAIIVKGE 66

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
             +H  LVE +K+VDVVI  ++        IL Q K+++AI+ AGN+K
Sbjct: 67  LDEHEKLVELMKKVDVVISALAF-----PQILDQFKILEAIKVAGNIK 109

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  116 bits (293), Expect = 3e-33
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 7/116 (6%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG--LDIDKLQMLLSFKKQGAHLIE 60
           ++K+L++G TG IGR IV AS+  G+ TY L R  I       K +++ +++  G  L+E
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116
               DH +LV+A+K+VD+VIC    +         Q+K++ AI+EAGNVKK   +E
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGRLLIED-----QVKIIKAIKEAGNVKKFFPSE 112

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  112 bits (280), Expect = 4e-31
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           K +VL+ G TG+IG+ +  ASL     TY+L RP       K ++  + + +GA ++   
Sbjct: 10  KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG-PRSPSKAKIFKALEDKGAIIVYGL 68

Query: 63  FADHRSLVEAVK--RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
             +  ++ + +K   +D+V+ T+ G      +IL Q+ LV A++  G +K
Sbjct: 69  INEQEAMEKILKEHEIDIVVSTVGG-----ESILDQIALVKAMKAVGTIK 113

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 71.2 bits (175), Expect = 1e-16
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M   K+ + G TG  G   +  ++  G+E  VL R     D  +L        + AH++ 
Sbjct: 1   MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-----DSSRLPSEGP---RPAHVVV 52

Query: 61  ASFADHRSLVEAVKRVDVVICTI-SGVHFRSHNILMQ--LKLVDAIREAGNVKK 111
                   + + V   D VI  + +        ++ +    +V A++  G V K
Sbjct: 53  GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDK 105

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 61.6 bits (150), Expect = 6e-13
 Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 13/109 (11%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             K++++G +G++G  ++  +L +G E   + R       +K    +  + +   + +A 
Sbjct: 4   VKKIVLIGASGFVGSALLNEALNRGFEVTAVVR-----HPEK----IKIENEHLKVKKAD 54

Query: 63  FADHRSLVEAVKRVDVVICTISGV----HFRSHNILMQLKLVDAIREAG 107
            +    + E  K  D VI   +            I + L ++D +++AG
Sbjct: 55  VSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG 103

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 61.0 bits (148), Expect = 1e-12
 Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 5   KVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
            VL++G  G I R ++      Q  +  +  R        K+          + +I    
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFAR-----QPAKIHKPYP---TNSQIIMGDV 76

Query: 64  ADHRSLVEAVKRVDVVICTISG--VHFRSHNILMQLKLVDAIREAG 107
            +H +L +A++  D+V   ++G  +  +++++      + A++   
Sbjct: 77  LNHAALKQAMQGQDIVYANLTGEDLDIQANSV------IAAMKACD 116

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
              K  V+G TG +G    +A  A GH+  ++ RP     I +L  L            
Sbjct: 11 GAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRP--SSQIQRLAYL------EPECRV 62

Query: 61 ASFADHRSLVEAVKRVDVVI 80
          A   DH  L  A++ +D VI
Sbjct: 63 AEMLDHAGLERALRGLDGVI 82

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 12/109 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+ +VG TG +G+ ++K+     ++ Y   R      ++++          A   +  + 
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-----KVEQVPQY---NNVKAVHFDVDW- 52

Query: 65  DHRSLVEAVKRVDVVICTI--SGVHFRSHNILMQLKLVDAIREAGNVKK 111
               + + +  +D +I      G      ++   +KL+ A  +A  VK+
Sbjct: 53  TPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKR 100

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 57.7 bits (139), Expect = 2e-11
 Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 6/91 (6%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           + ++G  G I + +    L        +  R      +           +   +IE SF
Sbjct: 7  YITILGAAGQIAQXLTATLLTYTDMHITLYGR-----QLKTRIPPEIIDHERVTVIEGSF 61

Query: 64 ADHRSLVEAVKRVDVVICTISGVHFRSHNIL 94
           +   L +AV   +VV            +I+
Sbjct: 62 QNPGXLEQAVTNAEVVFVGAMESGSDMASIV 92

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 57.6 bits (139), Expect = 2e-11
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 11/91 (12%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYV--LQRPDIGLDIDKLQMLLSFKKQGAHLI 59
              VLV G +G  G+ + K       +     L R          + +       A + 
Sbjct: 3  NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-----SAQGKEKI----GGEADVF 53

Query: 60 EASFADHRSLVEAVKRVDVVICTISGVHFRS 90
               D  S+  A + +D ++   S V    
Sbjct: 54 IGDITDADSINPAFQGIDALVILTSAVPKMK 84

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 57.0 bits (138), Expect = 3e-11
 Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           +VLVVG  G + R ++     +GHE   + R     + ++   L   ++  + ++ A+  
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR-----NEEQGPEL--RERGASDIVVANLE 75

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSHNILMQ------LKLVDAIREAGNVKK 111
           +      A   +D V+           +  +       +K +    + G +K+
Sbjct: 76  E--DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKR 125

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 13/106 (12%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+ V+G TG  G  IV  +  +GHE   + R     D  K    L     GA +      
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR-----DPQKAADRL-----GATVATLVKE 51

Query: 65  DHRSLVEAVKRVDVVICTIS---GVHFRSHNILMQLKLVDAIREAG 107
                   +  VD V+  +S   G      ++     LV  +R + 
Sbjct: 52  PLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD 97

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 54.7 bits (132), Expect = 3e-10
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 30/123 (24%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M   ++LV G  G +GR + +          +        D+  L             ++
Sbjct: 1   MAMKRLLVTGAAGQLGRVMRERLAPMAEILRL-------ADLSPLDPAGP----NEECVQ 49

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHF------------RSHNILMQLKLVDAIREAGN 108
              AD  ++   V   D +      VH                NI+    L +A R  G 
Sbjct: 50  CDLADANAVNAMVAGCDGI------VHLGGISVEKPFEQILQGNIIGLYNLYEAARAHG- 102

Query: 109 VKK 111
             +
Sbjct: 103 QPR 105

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYV---LQRPDIGLDIDKLQMLLSFKKQGA- 56
           +GK    VVGGTG++   +VK  L +G+   V   ++ PD   +  K+  LL  ++ G  
Sbjct: 7   IGKKTACVVGGTGFVASLLVKLLLQKGYA--VNTTVRDPD---NQKKVSHLLELQELGDL 61

Query: 57  HLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVD-----------AIRE 105
            +  A   D  S    +   D V    + VHF S +   +  ++            A   
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDP--ENDMIKPAIQGVVNVMKACTR 119

Query: 106 AGNVKK 111
           A +VK+
Sbjct: 120 AKSVKR 125

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 20/124 (16%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHE--TYVLQRPDIGLDIDKLQMLLSFKKQGA--HL 58
           K +V V GGTG++G  I+K+ L  G+   T +  R D       +  L +        H 
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTI--RADPE-RKRDVSFLTNLPGASEKLHF 57

Query: 59  IEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVD-----------AIREAG 107
             A  ++  S   A++    +  T S + F       +  +             A   + 
Sbjct: 58  FNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSE--PEEIVTKRTVDGALGILKACVNSK 115

Query: 108 NVKK 111
            VK+
Sbjct: 116 TVKR 119

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 53.5 bits (129), Expect = 9e-10
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 30/120 (25%)

Query: 4   SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           +++LV G  G +G  I        HE  +    DI +D+          +    ++    
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLS---DI-VDLGAA-------EAHEEIVACDL 51

Query: 64  ADHRSLVEAVKRVDVVICTISGVHF------------RSHNILMQLKLVDAIREAGNVKK 111
           AD +++ + VK  D +      +H                NI+    L +A R  G   +
Sbjct: 52  ADAQAVHDLVKDCDGI------IHLGGVSVERPWNDILQANIIGAYNLYEAARNLG-KPR 104

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 52.7 bits (126), Expect = 1e-09
 Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+ ++G TG  G RI++ +  +GHE   + R     +  K+        +  ++++    
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR-----NAGKITQT----HKDINILQKDIF 52

Query: 65  DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLK-LVDAIREAG 107
           D    +  +   +VV+         +   +  L  L+  +    
Sbjct: 53  D--LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV 94

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 35/125 (28%)

Query: 4   SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQM-LLSFKKQGAHLIEAS 62
           S ++V GG G+IG  +V   L++ +E  V         ID L      F  + A L++A 
Sbjct: 2   SLIVVTGGAGFIGSHVVDK-LSESNEIVV---------IDNLSSGNEEFVNEAARLVKAD 51

Query: 63  FADHRSLVEAVKRVDVVICTISGVHF-------RS---------HNILMQLKLVDAIREA 106
            A    + + +K  + V       H                   +N+L   +L++A+R+A
Sbjct: 52  LAA-DDIKDYLKGAEEVW------HIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA 104

Query: 107 GNVKK 111
           G V +
Sbjct: 105 G-VSR 108

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 29/131 (22%)

Query: 1   MG--KSKVLVVGGTGYIGRRIVKASLAQGHETYV---LQRPDIGLDIDKLQMLLSFKKQG 55
           MG     V V G +G+IG  +V   L +G+   V   ++ P    ++ K++ LL      
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPT---NVKKVKHLLDL--PK 53

Query: 56  A----HLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVD---------- 101
           A     L +A  AD  S  EA+K    V    + + F S +   + +++           
Sbjct: 54  AETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDP--ENEVIKPTIEGMLGIM 111

Query: 102 -AIREAGNVKK 111
            +   A  V++
Sbjct: 112 KSCAAAKTVRR 122

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 35/130 (26%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHE---TYVLQRPDIGLDIDKLQMLLS-FKKQGA-- 56
            S VLV G  G++   +V+  L  G++   T    R        KL  L   +  +    
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTA---R-----SASKLANLQKRWDAKYPGR 62

Query: 57  --HLIEASFADHRSLVEAVKRVDVVICTISGVHFRSH-------------NILMQLKLVD 101
               +        +  E +K    V    S V F +              N L       
Sbjct: 63  FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNAL------R 116

Query: 102 AIREAGNVKK 111
           A     +VK+
Sbjct: 117 AAAATPSVKR 126

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 35/126 (27%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQM-LLSFKKQGAHLIEASF 63
           +VLV GG G+IG  IV+  LA+G E  VL         D L         +G        
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVL---------DNLATGKRENVPKGVPFFRVDL 52

Query: 64  ADHRSLVEAVK--RVDVVICTISGVHF-------RS---------HNILMQLKLVDAIRE 105
            D   +  A +  R   V       H         S          N+L  L L++A R+
Sbjct: 53  RDKEGVERAFREFRPTHVS------HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQ 106

Query: 106 AGNVKK 111
            G V+K
Sbjct: 107 YG-VEK 111

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 21/105 (20%), Positives = 50/105 (47%), Gaps = 11/105 (10%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
            +++ G TG++G  I   ++A      ++  R     +++K+       +    + +  +
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-----NVEKVP---DDWRGKVSVRQLDY 53

Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLK-LVDAIREAG 107
            +  S+VEA K +D V+  I  +   S   + +++ LV A +++G
Sbjct: 54  FNQESMVEAFKGMDTVV-FIPSIIHPSFKRIPEVENLVYAAKQSG 97

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 9/110 (8%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI 59
           + K  V+V GGTG  G  + +  L  G  +  V+ R     +  K       + QGA ++
Sbjct: 3   VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-----NPRKKA-AKELRLQGAEVV 56

Query: 60  EASFADHRSLVEAVKRVDVV-ICTISGVHFRSHNILMQLK-LVDAIREAG 107
           +    D   +  A+       I T           + Q K L D  R  G
Sbjct: 57  QGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG 106

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 31/125 (24%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
             K+ + G  G+I   I +    +GH         I  D  K        +     +   
Sbjct: 29  NLKISITGAGGFIASHIARRLKHEGHYV-------IASDWKK-------NEHMTEDMFCD 74

Query: 63  ---FADHR---SLVEAVKRVDVVI---CTISGVHFRSH--------NILMQLKLVDAIRE 105
                D R   + ++  + VD V      + G+ F           N ++   +++A R 
Sbjct: 75  EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI 134

Query: 106 AGNVK 110
            G  +
Sbjct: 135 NGIKR 139

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 12/105 (11%)

Query: 6   VLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           + V G TG +G  +++  L +    +   + R     +++K     +   QG  +    +
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-----NVEKAS---TLADQGVEVRHGDY 54

Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLK-LVDAIREAG 107
               SL +A   V  ++  ISG H+ +  +++Q   +V A R+AG
Sbjct: 55  NQPESLQKAFAGVSKLL-FISGPHYDNTLLIVQHANVVKAARDAG 98

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 21/80 (26%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQR--PDIGLDIDKLQMLLSFKKQGAHLIEAS 62
          K+L++G +G +G  + +  L +  E     R   D+ +DI                   +
Sbjct: 5  KILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVTVDI------------------TN 45

Query: 63 FADHRSLVEAVKRVDVVICT 82
              + + E V +VD ++  
Sbjct: 46 IDSIKKMYEQVGKVDAIVSA 65

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 17/88 (19%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD---------IDKLQMLLSFKK 53
               L+ G  G+IG  +++  L    +  V     +GLD         +D+++ L+S K+
Sbjct: 27  PKVWLITGVAGFIGSNLLETLLKLDQK--V-----VGLDNFATGHQRNLDEVRSLVSEKQ 79

Query: 54  -QGAHLIEASFADHRSLVEAVKRVDVVI 80
                 I+    +      A   VD V+
Sbjct: 80  WSNFKFIQGDIRNLDDCNNACAGVDYVL 107

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD---------IDKLQMLLSF 51
                 L+ G  G+IG  +++  L       V     IGLD         +D+++ L+S 
Sbjct: 23  FSPKTWLITGVAGFIGSNLLEKLLKLNQV--V-----IGLDNFSTGHQYNLDEVKTLVST 75

Query: 52  KKQ-GAHLIEASFADHRSLVEAVKRVDVVI 80
           ++      IE    D  +  + +K VD V+
Sbjct: 76  EQWSRFCFIEGDIRDLTTCEQVMKGVDHVL 105

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 17/124 (13%), Positives = 31/124 (25%), Gaps = 25/124 (20%)

Query: 4   SKV-LVVGGTGYIGRRIVKASLAQGHETYVLQ------RPDIGLDIDKLQMLLSFKKQGA 56
           S V L+VG TG IG  + +            +      R                +    
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------HEDNPI 50

Query: 57  HLIEASFADHRSLVEAVKRVDVVICTISGVHFRSH--------NILMQLKLVDAIREAGN 108
           + ++   +D       +  +  V                    N  M   ++DA+     
Sbjct: 51  NYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCP 110

Query: 109 VKKR 112
             K 
Sbjct: 111 NLKH 114

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 19/113 (16%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M  SK+L+ G  G +G  + +   AQGHE   L+R         +         G   + 
Sbjct: 1   MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRR-----SAQPMP-------AGVQTLI 47

Query: 61  ASFADHRSLVEAVK-RVDVVICTI-----SGVHFRSHNILMQLKLVDAIREAG 107
           A      +L   V  R ++++  +     S  H+R   +      + A+  A 
Sbjct: 48  ADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP 100

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 31/119 (26%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+ V GGTG++G+ +V++    G+   +         + +   + +          + + 
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPII---------LTRS--IGNKAINDYEYRVSDYT 52

Query: 65  DHRSLVEAVKRVDVVICTISGVHF-------RS-----HNILMQLKLVDAIREAGNVKK 111
               L+  +  VD V+      H                N ++   L DA  E   +  
Sbjct: 53  L-EDLINQLNDVDAVV------HLAATRGSQGKISEFHDNEILTQNLYDACYENN-ISN 103

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 38/127 (29%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-----QGAHLI 59
           ++L+ GG G +G  +++  L QGHE  V+         D        ++      G  +I
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVI---------DNFAT--GKREVLPPVAGLSVI 70

Query: 60  EASFADHRSLVEAVK--RVDVVICTISGVHF----RS---------HNILMQLKLVDAIR 104
           E S  D   L  A    +   V+      H     +           N+   + +  A  
Sbjct: 71  EGSVTDAGLLERAFDSFKPTHVV------HSAAAYKDPDDWAEDAATNVQGSINVAKAAS 124

Query: 105 EAGNVKK 111
           +AG VK+
Sbjct: 125 KAG-VKR 130

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 45.2 bits (107), Expect = 8e-07
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
             K  + VVG TG  G  +++ + A GH             +  L            L +
Sbjct: 3   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQ 57

Query: 61  ASFADHRSLVE-AVKRVDVV-ICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
               ++  L++   +   +  I T S        I +   L DA + AG ++
Sbjct: 58  GPLLNNVPLMDTLFEGAHLAFINTTSQA---GDEIAIGKDLADAAKRAGTIQ 106

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHL 58
          M    V ++G +G  GR ++K  L QG   +  ++ R  +  D +  + +        + 
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV--------NQ 67

Query: 59 IEASFADHRSLVEAVKRVDVVICTI 83
              F        A +  DV  C +
Sbjct: 68 EVVDFEKLDDYASAFQGHDVGFCCL 92

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 18/76 (23%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
            V + G  G +GR +       GHE   L R                K+      +  + 
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVR----------------KEPKPG--KRFWD 190

Query: 65  DHRSLVEAVKRVDVVI 80
                 + +   DV++
Sbjct: 191 PLNPASDLLDGADVLV 206

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 41/127 (32%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ----GAHLIE 60
           +++V GG G+IG  +V   +  G+E  V         +D L    S +++     A L  
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVV---------VDNLS---SGRREFVNPSAELHV 49

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHF-------RS---------HNILMQLKLVDAIR 104
               D  S    +K  DVV       HF        S          N++    +++  R
Sbjct: 50  RDLKD-YSWGAGIK-GDVVF------HFAANPEVRLSTTEPIVHFNENVVATFNVLEWAR 101

Query: 105 EAGNVKK 111
           + G V+ 
Sbjct: 102 QTG-VRT 107

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 23/119 (19%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
            + ++G  G +GR++ +  +  G            +D+ + +    F         A  +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-SGAVDARAADLS 74

Query: 65  DHRSLVEAVK-RVDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG 107
                 + V+ R DV+       H                   N+     L DAIR A 
Sbjct: 75  APGEAEKLVEARPDVIF------HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIAN 127

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 43.2 bits (103), Expect = 4e-06
 Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 39/128 (30%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK---KQGAHLIEA 61
            +L+ GG GYIG   VK  + +G    V+         D LQ     +    +GA     
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLSVVVV---------DNLQT--GHEDAITEGAKFYNG 51

Query: 62  SFADHRSLVEAVK--RVDVVICTISGVHFRSH----------------NILMQLKLVDAI 103
              D   L +      ++ V+      HF +                 N+   L L++ +
Sbjct: 52  DLRDKAFLRDVFTQENIEAVM------HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVM 105

Query: 104 REAGNVKK 111
            E   V K
Sbjct: 106 DEFK-VDK 112

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 30/129 (23%), Positives = 46/129 (35%), Gaps = 29/129 (22%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ----- 54
           +  + V+VVGG G++G  +VK  L  G ++ +V+         D    LLS +K      
Sbjct: 30  LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVV---------DN---LLSAEKINVPDH 77

Query: 55  -GAHLIEASFADHRSLVEAVKRVDVVI---CTISGVH-------FRSHNILMQLKLVDAI 103
                 E S  D   L       D V                     +N L  LKL + +
Sbjct: 78  PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERL 137

Query: 104 REAGNVKKR 112
           +    +KK 
Sbjct: 138 KHFKRLKKV 146

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 12/104 (11%)

Query: 6   VLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           + + G TG +G  ++++ +      +   + R     +  K Q   +   QG  + +A +
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVR-----NPAKAQ---ALAAQGITVRQADY 53

Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107
            D  +L  A++ V+ ++  IS              +++A + AG
Sbjct: 54  GDEAALTSALQGVEKLL-LISSSEVGQR-APQHRNVINAAKAAG 95

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 22/119 (18%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD---IDKLQMLLSFKKQGAHLIEA 61
           KV + G  G IG  I +  L +G +        +G+D     + + L          +E 
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKV-------VGIDNFATGRREHLKDHP--NLTFVEG 73

Query: 62  SFADHRSLVEAVK--RVDVVI---CTISGVH----FRSHNILMQLKLVDAIREAGNVKK 111
           S ADH  + + +   + D V+    +             N +    +V A ++   V +
Sbjct: 74  SIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGR 131

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 39.5 bits (92), Expect = 8e-05
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEAS 62
           K +V+ GTG +G R       +G E  +  R      +DK Q       K+   ++  A 
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-----KLDKAQAAADSVNKRFKVNVTAAE 175

Query: 63  FADHRSLVEAVKRVDVVICT 82
            AD  S  EAVK    V   
Sbjct: 176 TADDASRAEAVKGAHFVFTA 195

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
          +LV G +G IG  +V     +  +  V     I  DI +          G   I    ++
Sbjct: 2  ILVTGSSGQIGTELVPYLAEKYGKKNV-----IASDIVQR------DTGGIKFITLDVSN 50

Query: 66 HRSLVEAVK--RVDVVI 80
             +  AV+   +D + 
Sbjct: 51 RDEIDRAVEKYSIDAIF 67

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
          M    VL++G +G++ R  +      G +  V         ++  + L +   Q +  I 
Sbjct: 1  MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTV-----ACRTLESAKKLSA-GVQHSTPIS 53

Query: 61 ASFADHRSLVEAVKRVDVVICTI 83
              D  +L   V + D+VI  I
Sbjct: 54 LDVNDDAALDAEVAKHDLVISLI 76

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 24/143 (16%), Positives = 41/143 (28%), Gaps = 44/143 (30%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQ-GHETYVL---------------QRPDIGLDIDKLQML 48
           +VLV GG GYIG   V+A L    H   ++               +              
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 49  LSFKKQGAHLIEASFADHRSLVEAV----KRVDVVICTISGVHFRSH------------- 91
             +  + A L      +    +  V      +D V+      H  +              
Sbjct: 64  PPWADRYAALEVGDVRN-EDFLNGVFTRHGPIDAVV------HMCAFLAVGESVRDPLKY 116

Query: 92  ---NILMQLKLVDAIREAGNVKK 111
              N++  L+L+ A+       K
Sbjct: 117 YDNNVVGILRLLQAMLLHK-CDK 138

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 36.9 bits (86), Expect = 6e-04
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 21/120 (17%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQM-----LLSFKKQG 55
           +    ++V GG G+IG  IVKA   +G         DI L +D L+       L      
Sbjct: 44  IEGRMIIVTGGAGFIGSNIVKALNDKGIT-------DI-LVVDNLKDGTKFVNLVDLNIA 95

Query: 56  AHLIEASFADHRSLVEAVKRVDVVI--CTISGVH------FRSHNILMQLKLVDAIREAG 107
            ++ +  F       E    V+ +      S            +N     +L+    E  
Sbjct: 96  DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE 155

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 14/78 (17%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQG-AHLIEASF 63
          ++L+ GG G+IG  + +A +A G E  VL         D L++      +G    +E   
Sbjct: 9  RILITGGAGFIGGHLARALVASGEEVTVL---------DDLRVPPMIPPEGTGKFLE--- 56

Query: 64 ADHRSLVE-AVKRVDVVI 80
               L E  +  V +V 
Sbjct: 57 KPVLELEERDLSDVRLVY 74

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 36.2 bits (84), Expect = 9e-04
 Identities = 15/104 (14%), Positives = 27/104 (25%), Gaps = 17/104 (16%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHET--YVLQRPDIGLDIDKLQMLLSFKKQGAHL 58
               +VL+ G TG  G  ++   L++          R  +                   L
Sbjct: 3   STPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH--------------PRL 48

Query: 59  IEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDA 102
                     L +    +D   C + G   +        + VD 
Sbjct: 49  DNPVGPLAELLPQLDGSIDTAFCCL-GTTIKEAGSEEAFRAVDF 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.9
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.89
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.88
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.88
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.87
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.87
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.87
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.86
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.86
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.86
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.86
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.86
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.86
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.85
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.85
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.85
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.85
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.85
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.85
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.84
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.84
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.84
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.84
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.83
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.83
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.82
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.82
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.82
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.82
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.82
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.82
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.82
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.82
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.82
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.82
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.82
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.81
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.81
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.81
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.81
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.81
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.81
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.81
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.81
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.81
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.81
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.81
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.81
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.8
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.8
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.8
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.8
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.8
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.8
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.8
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.8
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.8
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.8
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.8
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.8
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.8
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.8
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.8
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.8
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.79
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.79
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.79
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.79
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.79
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.79
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.79
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.79
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.79
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.79
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.79
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.79
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.79
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.79
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.79
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.79
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.79
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.79
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.79
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.79
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.79
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.79
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.79
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.79
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.79
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.79
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.79
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.79
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.79
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.78
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.78
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.78
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.78
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.78
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.78
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.78
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.78
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.78
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.78
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.78
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.78
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.78
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.78
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.78
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.78
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.78
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.78
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.78
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.78
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.78
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.78
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.78
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.78
1spx_A	278	Short-chain reductase family member (5L265); paral	99.78
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.78
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.78
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.78
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.78
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.78
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.78
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.78
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.78
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.77
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.77
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.77
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.77
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.77
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.77
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.77
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.77
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.77
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.77
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.77
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.77
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.77
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.77
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.77
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.77
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.77
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.77
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.77
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.77
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.77
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.77
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.77
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.77
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.77
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.77
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.77
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.77
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.77
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.77
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.77
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.77
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.76
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.76
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.76
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.76
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.76
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.76
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.76
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.76
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.76
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.76
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.76
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.76
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.76
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.76
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.76
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.76
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.76
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.76
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.76
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.76
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.76
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.76
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.76
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.76
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.75
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.75
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.75
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.75
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.75
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.75
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.75
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.75
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.75
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.74
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.74
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.74
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.74
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.74
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.74
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.74
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.74
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.74
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.74
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.74
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.74
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.74
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.74
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.73
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.73
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.73
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.73
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.73
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.73
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.73
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.73
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.73
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.73
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.72
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.72
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.72
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.72
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.72
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.72
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.72
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.72
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.72
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.71
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.71
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.71
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.71
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.71
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.7
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.7
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.7
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.7
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.69
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.69
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.69
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.68
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.68
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.68
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.68
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.67
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.66
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.66
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.65
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.65
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.63
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.6
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.6
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.59
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.55
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.55
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.51
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.46
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.45
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.42
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.42
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.42
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.42
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.41
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.4
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.39
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.39
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.39
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.35
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.33
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.33
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.32
1id1_A	153	Putative potassium channel protein; RCK domain, E.	99.32
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.31
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.3
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	99.28
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.27
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.26
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	99.26
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.23
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	99.22
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	99.16
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	99.16
3c85_A	183	Putative glutathione-regulated potassium-efflux S	99.06
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	99.06
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.05
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.02
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.97
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.94
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.92
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.88
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.87
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.85
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.81
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.73
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.65
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.65
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.62
1lnq_A	336	MTHK channels, potassium channel related protein;	98.6
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.58
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.53
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.53
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.52
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.49
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.48
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.47
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.47
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.47
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.43
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.4
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.37
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.36
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	98.35
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.34
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.34
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	98.34
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.33
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.33
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.3
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.29
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	98.29
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.28
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.27
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.26
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.26
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.25
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.25
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	98.24
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.23
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.23
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.23
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	98.23
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.22
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.21
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.21
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	98.21
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.21
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	98.2
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.19
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	98.19
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.18
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.17
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	98.17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.16
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	98.16
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.13
3qha_A	296	Putative oxidoreductase; seattle structural genomi	98.12
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.12
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	98.11
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.11
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.11
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	98.1
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.1
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.08
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.08
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	98.08
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.08
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	98.08
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	98.08
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.07
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.07
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	98.05
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	98.04
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	98.04
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.03
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	98.03
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	98.03
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.03
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.03
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	98.03
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.03
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	98.02
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.01
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	98.01
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.0
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	98.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	98.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	98.0
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.99
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.99
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.99
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.98
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.98
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.98
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.98
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.97
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.97
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.97
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.96
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.96
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.95
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.94
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.94
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.94
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.94
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.94
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.94
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.94
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.93
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.91
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	97.9
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.9
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.88
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.88
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.88
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.88
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.87
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.86
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.86
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.86
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.86
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.85
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.85
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	97.85
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.84
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.83
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.82
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.81
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.8
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.8
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.79
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.79
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.78
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.78
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.78
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.78
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.77
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.77
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.75
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.75
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.75
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.74
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.74
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.73
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.73
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.73
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.73
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.73
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	97.72
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.72
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.72
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.72
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.71
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.71
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.71
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.69
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.69
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.69
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.68

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=3.1e-23  Score=136.36  Aligned_cols=111  Identities=20%  Similarity=0.360  Sum_probs=93.5

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+ +|+++||||+|++|+++++.|+++|++|++++|+++.        ...+ ..+++++.+|++|++++.++++++|+|
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   71 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK--------IKIE-NEHLKVKKADVSSLDEVCEVCKGADAV   71 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG--------CCCC-CTTEEEECCCTTCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc--------chhc-cCceEEEEecCCCHHHHHHHhcCCCEE
Confidence            54 4789999999999999999999999999999998722        1111 267899999999999999999999999


Q ss_pred             EEeCccc----cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGV----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||++|+.    ..++.|+.++.++++++.+.+ ++++|++||...+
T Consensus        72 i~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~  116 (227)
T 3dhn_A           72 ISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSL  116 (227)
T ss_dssp             EECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTS
T ss_pred             EEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhc
Confidence            9999865    245678999999999999998 8999999987644

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.90  E-value=4.1e-23  Score=143.41  Aligned_cols=119  Identities=18%  Similarity=0.205  Sum_probs=98.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++....... .......    ..+++++.+|++|++++.++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNL-DEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHH-HHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-hhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            35689999999999999999999999999999999875432222 2111111    168999999999999999999999


Q ss_pred             CEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           77 DVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy  155 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTY  155 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGG
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhc
Confidence            99999998532          34678999999999999998 8999999987765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=1e-22  Score=131.70  Aligned_cols=112  Identities=21%  Similarity=0.219  Sum_probs=95.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |+.|+++||||+|++|+++++.|+++|++|++++|+++.        .......+++++.+|++|++++.++++++|+||
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   72 (206)
T 1hdo_A            1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVI   72 (206)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG--------SCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh--------cccccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            667899999999999999999999999999999998722        111224578999999999999999999999999


Q ss_pred             EeCcccc---ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH---FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+++...   ..+.|..++.++++++.+.+ +++++++||...|
T Consensus        73 ~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~  115 (206)
T 1hdo_A           73 VLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLL  115 (206)
T ss_dssp             ECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             ECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeec
Confidence            9998643   34568899999999999998 8999999987644

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.89  E-value=5.5e-23  Score=138.56  Aligned_cols=109  Identities=16%  Similarity=0.174  Sum_probs=96.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...           ...+++++.+|++|++++.++++++|+||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   69 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQCDLADANAVNAMVAGCDGIV   69 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC-----------CCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc-----------cCCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            6778999999999999999999999999999999987322           14678999999999999999999999999


Q ss_pred             EeCcccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||||...      .++.|+.++.++++++.+.+ .+++|++||...|
T Consensus        70 ~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~  115 (267)
T 3rft_A           70 HLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTI  115 (267)
T ss_dssp             ECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGG
T ss_pred             ECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHh
Confidence            9998642      34679999999999999988 7999999987655

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=1.6e-22  Score=132.49  Aligned_cols=107  Identities=17%  Similarity=0.242  Sum_probs=93.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~~   82 (124)
                      |+++||||+|++|+++++.|+++|++|++++|++..        ...  ..+++++.+|++| ++++.++++++|+|||+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--------~~~--~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ--------VPQ--YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGG--------SCC--CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccc--------hhh--cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            489999999999999999999999999999998721        111  1678999999999 99999999999999999


Q ss_pred             Cccc--cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGV--HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|..  ..++.|+.++.++++++.+.+ ++++|++||...+
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~  110 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL  110 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTT
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECccccc
Confidence            9865  356789999999999999998 8999999987644

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=1.7e-22  Score=139.61  Aligned_cols=110  Identities=21%  Similarity=0.225  Sum_probs=91.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|++...        +.+...+++++.+|++|++++.++++++|+|||+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI--------QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG--------GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh--------hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            46899999999999999999999999999999987322        1122347889999999999999999999999999


Q ss_pred             Ccccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...        .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~  130 (342)
T 2x4g_A           85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAM  130 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGS
T ss_pred             CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhh
Confidence            98543        24578999999999999998 8999999987765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.88  E-value=3.8e-22  Score=132.25  Aligned_cols=108  Identities=16%  Similarity=0.264  Sum_probs=90.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++|+++||||+|+||+++++.|+++| ++|++++|+++        ........+++++.+|++|++++.++++++|+|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~--------~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA--------KIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG--------GSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh--------hhcccccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            566889999999999999999999999 99999999872        222233457899999999999999999999999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+++....    ...+.++++++.+.+ +++||++||...|
T Consensus        93 v~~a~~~~~----~~~~~~~~~~~~~~~-~~~iV~iSS~~~~  129 (236)
T 3qvo_A           93 YANLTGEDL----DIQANSVIAAMKACD-VKRLIFVLSLGIY  129 (236)
T ss_dssp             EEECCSTTH----HHHHHHHHHHHHHTT-CCEEEEECCCCC-
T ss_pred             EEcCCCCch----hHHHHHHHHHHHHcC-CCEEEEEecceec
Confidence            999986332    345788999999998 8999999987654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=5.4e-22  Score=137.96  Aligned_cols=119  Identities=17%  Similarity=0.149  Sum_probs=96.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc---cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK---KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.............+.   ..+++++.+|++|++++.++++++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            467899999999999999999999999999999986432211111111111   36789999999999999999999999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~  157 (352)
T 1sb8_A          106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTY  157 (352)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGG
T ss_pred             EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhc
Confidence            999998642          23578999999999999988 8999999987655

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=5.8e-22  Score=137.04  Aligned_cols=117  Identities=21%  Similarity=0.289  Sum_probs=97.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   80 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++....... +........+++++.+|++|++++.++++  ++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            578999999999999999999999999999999875543322 22223335678999999999999999998  799999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~  133 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVY  133 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGB
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEe
Confidence            9998642          24568999999999999998 7899999987655

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=8.6e-22  Score=129.19  Aligned_cols=107  Identities=15%  Similarity=0.116  Sum_probs=90.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHh-hCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASL-AQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      ||+++++||||+|++|+++++.|+ ++|++|++++|++.    .   ..+.+  ...+++++.+|++|++++.++++++|
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK----T---RIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAE   75 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH----H---HSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc----c---cchhhccCCCceEEEECCCCCHHHHHHHHcCCC
Confidence            345669999999999999999999 89999999999871    0   22222  35678999999999999999999999


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||++|..     |+. +.++++++.+.+ ++++|++||...|
T Consensus        76 ~vv~~ag~~-----n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~  112 (221)
T 3r6d_A           76 VVFVGAMES-----GSD-MASIVKALSRXN-IRRVIGVSMAGLS  112 (221)
T ss_dssp             EEEESCCCC-----HHH-HHHHHHHHHHTT-CCEEEEEEETTTT
T ss_pred             EEEEcCCCC-----Chh-HHHHHHHHHhcC-CCeEEEEeeceec
Confidence            999999853     445 899999999988 7899999987654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.88  E-value=2.8e-22  Score=132.70  Aligned_cols=108  Identities=19%  Similarity=0.302  Sum_probs=91.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++|+++||||+|++|+++++.|+++|++|++++|+++        ..+.+...++ +++.+|++  +++.+++.++|+|
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~--------~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE--------QGPELRERGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG--------GHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH--------HHHHHHhCCCceEEEcccH--HHHHHHHcCCCEE
Confidence            45789999999999999999999999999999999872        1222234578 99999999  7888899999999


Q ss_pred             EEeCcccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           80 ICTISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      ||++|...      .++.|+.++.++++++.+.+ ++++|++||..
T Consensus        89 i~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~  133 (236)
T 3e8x_A           89 VFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVG  133 (236)
T ss_dssp             EECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTT
T ss_pred             EECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCC
Confidence            99999653      34678999999999999998 89999999754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.88  E-value=5e-22  Score=134.77  Aligned_cols=107  Identities=21%  Similarity=0.193  Sum_probs=94.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      |+++||||+|++|+++++.|.+. |++|++++|+++        ....+...+++++.+|++|++++.++++++|+|||+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~--------~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE--------KVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG--------GSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH--------HHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            57999999999999999999988 899999999872        222334578999999999999999999999999999


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      ++.......|+.++.++++++.+.+ ++++|++||..
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccC
Confidence            9977666678899999999999999 89999999743

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.88  E-value=4.1e-22  Score=139.34  Aligned_cols=111  Identities=21%  Similarity=0.296  Sum_probs=93.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccC-ChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFA-DHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~-~~~~~~~~~~~~d   77 (124)
                      |++|+++||||+|++|+++++.|+++ |++|++++|++...        ..+ ...+++++.+|++ |++.+.++++++|
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--------~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d   93 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL--------GDLVKHERMHFFEGDITINKEWVEYHVKKCD   93 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT--------GGGGGSTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh--------hhhccCCCeEEEeCccCCCHHHHHHHhccCC
Confidence            56789999999999999999999998 89999999987322        111 2468999999999 9999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+  +++|++||...|
T Consensus        94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vy  145 (372)
T 3slg_A           94 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVY  145 (372)
T ss_dssp             EEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGG
T ss_pred             EEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHh
Confidence            9999998543          23568899999999999998  799999987655

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.87  E-value=6.5e-22  Score=136.65  Aligned_cols=114  Identities=24%  Similarity=0.362  Sum_probs=94.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      |.+|+++||||+|+||+++++.|+++|++|++++|++....    +....  -.+++++.+|++|++++.++++  ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~--l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR----EVLPP--VAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG----GGSCS--CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch----hhhhc--cCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            35689999999999999999999999999999999763221    11111  1478899999999999999999  8999


Q ss_pred             EEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+||....       ++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~  140 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCY  140 (330)
T ss_dssp             EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGG
T ss_pred             EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHh
Confidence            9999986543       4578999999999999988 8899999987654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=1.3e-21  Score=135.52  Aligned_cols=119  Identities=22%  Similarity=0.276  Sum_probs=95.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-----CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-----LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|+...     ......+.+......+++++.+|++|++++.++++  
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            35889999999999999999999999999999987533     01122222222224578999999999999999998  


Q ss_pred             ccCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|+|||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~  136 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVY  136 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGG
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHh
Confidence            7999999998642          24578999999999999988 7899999987655

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=2.5e-22  Score=133.11  Aligned_cols=112  Identities=21%  Similarity=0.287  Sum_probs=94.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|+++||||+|+||+++++.|+++|+  +|++++|++......        ...++.++.+|++|++++.++++++|+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~~~d~   87 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE--------AYKNVNQEVVDFEKLDDYASAFQGHDV   87 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG--------GGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc--------ccCCceEEecCcCCHHHHHHHhcCCCE
Confidence            3467899999999999999999999999  999999987433211        123578999999999999999999999


Q ss_pred             EEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||||+|...       ..+.|+.++.++++++.+.+ ++++|++||...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~  136 (242)
T 2bka_A           88 GFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGAD  136 (242)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCC
T ss_pred             EEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCC
Confidence            999998642       34568899999999999988 7899999987654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=6.8e-22  Score=137.00  Aligned_cols=117  Identities=15%  Similarity=0.237  Sum_probs=93.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      ++|+++||||+|+||+++++.|+++|  ++|++.+|...........  ......+++++.+|++|++++.+++++  +|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVK--SIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGT--TTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhh--hhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            35789999999999999999999999  7777777765322211111  111246899999999999999999997  99


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy  153 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVY  153 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGG
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHh
Confidence            9999998543          24678999999999999998 8999999987655

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.87  E-value=1.8e-21  Score=135.48  Aligned_cols=116  Identities=19%  Similarity=0.288  Sum_probs=96.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC-CC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|+++||||+|++|+++++.|++. |+ +|++++|++    .........+...+++++.+|++|++++.++++++|+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~----~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~   94 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE----LKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDI   94 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH----HHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh----hhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCE
Confidence            34689999999999999999999999 97 999999986    2222222223346899999999999999999999999


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...          .++.|+.++.++++++.+.+ ++++|++||...+
T Consensus        95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~  146 (344)
T 2gn4_A           95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA  146 (344)
T ss_dssp             EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS
T ss_pred             EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC
Confidence            999998542          34678999999999999998 8999999986543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.87  E-value=1.3e-21  Score=135.02  Aligned_cols=118  Identities=22%  Similarity=0.330  Sum_probs=93.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |++|+++||||+|+||+++++.|+++|  ++|++++|++.......   ...+ ...+++++.+|++|++++.+++.++|
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN---LKDLEDDPRYTFVKGDVADYELVKELVRKVD   77 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHHTCS
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH---HhhhccCCceEEEEcCCCCHHHHHHHhhCCC
Confidence            778899999999999999999999986  89999998752211111   1111 14578999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+..+++|++||...|
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy  131 (336)
T 2hun_A           78 GVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVY  131 (336)
T ss_dssp             EEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred             EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHH
Confidence            9999998642          2457899999999999998723699999987654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=6.5e-22  Score=136.81  Aligned_cols=113  Identities=20%  Similarity=0.249  Sum_probs=93.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      ++|+++||||+|++|+++++.|+++|++|++++|++....    +.+..  ..+++++.+|++|++++.+++++  +|+|
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~l~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~D~v   93 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR----EHLKD--HPNLTFVEGSIADHALVNQLIGDLQPDAV   93 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSCC--CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch----hhHhh--cCCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence            4688999999999999999999999999999999863211    11111  14788999999999999999998  9999


Q ss_pred             EEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+....       ++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        94 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~  141 (333)
T 2q1w_A           94 VHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCY  141 (333)
T ss_dssp             EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGG
T ss_pred             EECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHh
Confidence            999986543       4568999999999999988 7899999987655

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.87  E-value=7.9e-22  Score=136.72  Aligned_cols=104  Identities=24%  Similarity=0.313  Sum_probs=91.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++..              .+++++.+|++|++++.++++++|+|||+
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVLHL   84 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence            5789999999999999999999999999999998721              56789999999999999999999999999


Q ss_pred             Ccccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...        .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vy  130 (347)
T 4id9_A           85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVY  130 (347)
T ss_dssp             CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGT
T ss_pred             CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHh
Confidence            98653        24568899999999999998 8999999987665

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=1.3e-21  Score=134.03  Aligned_cols=106  Identities=19%  Similarity=0.297  Sum_probs=91.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|++...     . .     .+++++.+|++ ++++.++++++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-~-----~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----A-I-----NDYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-----c-C-----CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            58899999999999999999999999999999984111     1 1     17899999999 99999999999999999


Q ss_pred             Ccccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...      .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vy  113 (311)
T 3m2p_A           70 AATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAY  113 (311)
T ss_dssp             CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGC
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHh
Confidence            98643      34678999999999999998 8999999987655

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=2.1e-21  Score=134.22  Aligned_cols=115  Identities=23%  Similarity=0.267  Sum_probs=92.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH-HHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID-KLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|+||+++++.|+++|++|+++.|++...... ......  ...+++++.+|++|++++.++++++|+|||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999976432111 111111  234688999999999999999999999999


Q ss_pred             eCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           82 TISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        82 ~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +|++..         .++.|+.++.++++++.+.+.++|+|++||..
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~  133 (338)
T 2rh8_A           87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA  133 (338)
T ss_dssp             ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred             eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHH
Confidence            997542         34568999999999999874378999999865

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.87  E-value=2e-21  Score=134.61  Aligned_cols=116  Identities=18%  Similarity=0.267  Sum_probs=93.9

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+ +|+++||||+|+||+++++.|+++  |++|++++|++......   ....+...+++++.+|++|++++.++++++|
T Consensus         1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (348)
T 1oc2_A            1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA---NLEAILGDRVELVVGDIADAELVDKLAAKAD   77 (348)
T ss_dssp             --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GTGGGCSSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChh---HHhhhccCCeEEEECCCCCHHHHHHHhhcCC
Confidence            54 478999999999999999999998  89999999976321111   1222234678999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vy  129 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVY  129 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGG
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEeccccee
Confidence            9999998652          24578999999999999998 6 99999987654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.87  E-value=2.7e-21  Score=128.37  Aligned_cols=110  Identities=22%  Similarity=0.207  Sum_probs=92.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|+++||||+|++|+++++.|+++  |++|++++|++     ...+   .+ ..+++++.+|++|++++.++++++|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~-----~~~~---~~-~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----QGKE---KI-GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH-----HHHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC-----Cchh---hc-CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            56789999999999999999999999  89999999986     2111   11 35678999999999999999999999


Q ss_pred             EEEeCccccc-----------------------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           79 VICTISGVHF-----------------------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        79 vi~~a~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |||++|....                       .+.|+.++.++++++.+.+ ++++|++||...
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~  136 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGG  136 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTT
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccC
Confidence            9999985421                       2567899999999999998 789999997653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.87  E-value=1.3e-21  Score=135.11  Aligned_cols=118  Identities=18%  Similarity=0.216  Sum_probs=94.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++........+..  ....+++++.+|++|++++.+++++  +|+
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKEL--GIENDVKIIHMDLLEFSNIIRTIEKVQPDE   78 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHT--TCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhc--cccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence            678999999999999999999999999999999998744322111111  1234688999999999999999986  699


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhCCc-cEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNV-KKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ss~~~~  121 (124)
                      |||+||...          .++.|+.++.++++++.+.+ + +++|++||...|
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vy  131 (345)
T 2z1m_A           79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMF  131 (345)
T ss_dssp             EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGG
T ss_pred             EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhc
Confidence            999998642          24578999999999999887 6 799999987654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.87  E-value=1.7e-21  Score=136.84  Aligned_cols=110  Identities=14%  Similarity=0.183  Sum_probs=93.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++....        .....+++++.+|++|++++.++++++|+|||+
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch--------hhccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            578999999999999999999999999999999874321        112347889999999999999999999999999


Q ss_pred             Ccccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...           .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~  149 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIY  149 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGS
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehhee
Confidence            98542           23468899999999999988 8899999987654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=2.5e-21  Score=126.44  Aligned_cols=106  Identities=15%  Similarity=0.222  Sum_probs=89.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|++|+++++.|+++|++|++++|++        +....+. .+++++.+|++|+++  ++++++|+|||++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   69 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA--------GKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAY   69 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS--------HHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc--------hhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence            5799999999999999999999999999999997        2222222 678999999999988  7889999999999


Q ss_pred             cccc-ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGVH-FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |... ....|+.++.++++++.+.+ ++++|++||...+
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~  107 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASL  107 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC--
T ss_pred             cCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEE
Confidence            8642 34568899999999999987 7899999987543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.86  E-value=4.6e-21  Score=132.60  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=93.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++|++|++++|+...........+.  ...+++++.+|++|++++.+++++  +|+|||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc--cCCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            6899999999999999999999999999999864222111122221  124689999999999999999998  999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCcc-EEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVK-KRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+.+ ++ ++|++||...|
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~  129 (347)
T 1orr_A           80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVY  129 (347)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGG
T ss_pred             CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHh
Confidence            998642          24578999999999999998 65 99999987654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=1.4e-21  Score=135.06  Aligned_cols=115  Identities=23%  Similarity=0.277  Sum_probs=91.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++...  .+......+.  ..+++++.+|++|++++.++++++|+||
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV--KKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCH--HHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchh--HHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            57899999999999999999999999999999986321  1111111111  1357899999999999999999999999


Q ss_pred             EeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           81 CTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      |+|++..         .++.|+.++.++++++.+.+.++|+|++||..
T Consensus        83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~  130 (337)
T 2c29_D           83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAG  130 (337)
T ss_dssp             ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGG
T ss_pred             EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHh
Confidence            9998542         24568899999999999876468999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.86  E-value=1.7e-21  Score=131.93  Aligned_cols=108  Identities=19%  Similarity=0.236  Sum_probs=90.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |+++||||+|++|+++++.|+++  |++|++++|++...        ..+...+++++.+|++|++++.++++++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA--------STLADQGVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT--------HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH--------hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            57999999999999999999998  99999999987321        111235788999999999999999999999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +++.....+.|+.++.++++++.+.+ ++++|++||...
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~  110 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFA  110 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTG
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCC
Confidence            99853211238899999999999998 899999997654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.86  E-value=9.8e-21  Score=129.52  Aligned_cols=115  Identities=62%  Similarity=0.929  Sum_probs=93.5

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+ +|+++||||+|++|+++++.|++.|++|++++|+++.....+.+.+..+...+++++.+|++|++++.++++++|+|
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~v   80 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV   80 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence            55 67899999999999999999999999999999987543233333333344568999999999999999999999999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||+++.... ..|+.++.++++++.+.+.++|+|+++
T Consensus        81 i~~a~~~~~-~~~~~~~~~l~~aa~~~g~v~~~v~S~  116 (313)
T 1qyd_A           81 ISALAGGVL-SHHILEQLKLVEAIKEAGNIKRFLPSE  116 (313)
T ss_dssp             EECCCCSSS-STTTTTHHHHHHHHHHSCCCSEEECSC
T ss_pred             EECCccccc-hhhHHHHHHHHHHHHhcCCCceEEecC
Confidence            999986532 357888999999999986478998743

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.86  E-value=1.8e-21  Score=127.61  Aligned_cols=105  Identities=20%  Similarity=0.173  Sum_probs=89.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|++|+++++.|+++|++|++++|++        .....+...+++++.+|++|+++  ++++++|+|||++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   70 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP--------QKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDAL   70 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc--------cccccccCCCceEEecccccccH--hhcccCCEEEECC
Confidence            5799999999999999999999999999999987        22223345689999999999988  8889999999999


Q ss_pred             ccc---cceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           84 SGV---HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        84 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      |..   .....|+.++.++++++.+.+  +++|++||...
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~  108 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSAS  108 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGG
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEeccee
Confidence            874   334568999999999999887  79999987643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.86  E-value=8.8e-22  Score=133.48  Aligned_cols=107  Identities=21%  Similarity=0.297  Sum_probs=92.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-cCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-VDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~v   79 (124)
                      |++|+++||| +|++|+++++.|+++|++|++++|+++.            ...+++++.+|++|++++.+++++ +|+|
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   67 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP------------MPAGVQTLIADVTRPDTLASIVHLRPEIL   67 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC------------CCTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc------------cccCCceEEccCCChHHHHHhhcCCCCEE
Confidence            7788999999 5999999999999999999999998732            136788999999999999999998 9999


Q ss_pred             EEeCccc-----cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGV-----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+..     ...+.|+.++.++++++.+.+ ++++|++||...|
T Consensus        68 ih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vy  113 (286)
T 3gpi_A           68 VYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVY  113 (286)
T ss_dssp             EECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGC
T ss_pred             EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEE
Confidence            9999753     346789999999999999888 8999999987655

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.86  E-value=6.1e-21  Score=132.77  Aligned_cols=117  Identities=18%  Similarity=0.170  Sum_probs=94.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++....... ....  ...+++++.+|++|++++.+++++  +|+|
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF-ETAR--VADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH-HHTT--TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhh-Hhhc--cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            4689999999999999999999999999999999874432211 1111  135789999999999999999986  8999


Q ss_pred             EEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+..          ..++.|+.++.++++++.+.+.++++|++||...|
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vy  136 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY  136 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHh
Confidence            9999842          12457899999999999987546899999987654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.86  E-value=5.8e-21  Score=133.27  Aligned_cols=118  Identities=14%  Similarity=0.160  Sum_probs=93.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhh--CCCeEEEEeCCCCCCchH-----HHHHhhhhccCCeEEEEcccCChHHHHHH-h
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLA--QGHETYVLQRPDIGLDID-----KLQMLLSFKKQGAHLIEASFADHRSLVEA-V   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~--~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~   73 (124)
                      ++|+++||||+|+||+++++.|++  .|++|++++|+++.....     ...........+++++.+|++|++++.++ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            357999999999999999999999  899999999976411000     00111122345679999999999999999 7


Q ss_pred             cccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           74 KRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        74 ~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .++|+|||+|+...        .++.|+.++.++++++.+.+ ++ +|++||...|
T Consensus        89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vy  142 (362)
T 3sxp_A           89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVY  142 (362)
T ss_dssp             SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGG
T ss_pred             cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHh
Confidence            88999999998653        24578999999999999988 66 9999986654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.86  E-value=1e-20  Score=131.42  Aligned_cols=110  Identities=30%  Similarity=0.545  Sum_probs=92.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      |++|+++||||+|++|+++++.|++.|++|++++|+++.. ..+.+....+...+++++.+|++|++++.++++  ++|+
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC-hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence            4457899999999999999999999999999999987432 233344445556789999999999999999999  9999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |||+++.     .|+.++.++++++.+.+.++++++++
T Consensus        87 Vi~~a~~-----~n~~~~~~l~~aa~~~g~v~~~v~S~  119 (346)
T 3i6i_A           87 VVSTVGG-----ESILDQIALVKAMKAVGTIKRFLPSE  119 (346)
T ss_dssp             EEECCCG-----GGGGGHHHHHHHHHHHCCCSEEECSC
T ss_pred             EEECCch-----hhHHHHHHHHHHHHHcCCceEEeecc
Confidence            9999995     48889999999999998678998854

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.86  E-value=1.1e-20  Score=130.54  Aligned_cols=115  Identities=22%  Similarity=0.318  Sum_probs=93.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC---C---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ---G---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~---g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+++||||+|+||+++++.|+++   |   ++|++++|++............  ...+++++.+|++|++++.+++.++|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d   78 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLARELRGVD   78 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc--cCCCeEEEEcCCCCHHHHHHHhcCCC
Confidence            57999999999999999999996   8   9999999975321111111111  13578999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vy  131 (337)
T 1r6d_A           79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVY  131 (337)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGG
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHh
Confidence            9999998642          24578999999999999998 7899999987654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.85  E-value=1.3e-20  Score=132.58  Aligned_cols=118  Identities=21%  Similarity=0.255  Sum_probs=93.5

Q ss_pred             CceEEEEccCChhcHHHHHHHh-hCCCeEEEEeCCCCCC--------chHHHHHhhhhcc----CC---eEEEEcccCCh
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL-AQGHETYVLQRPDIGL--------DIDKLQMLLSFKK----QG---AHLIEASFADH   66 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~-~~g~~v~~~~r~~~~~--------~~~~~~~~~~~~~----~~---~~~~~~D~~~~   66 (124)
                      +|+++||||+|+||+++++.|+ +.|++|++++|+....        .....+.++.+..    .+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            5799999999999999999999 9999999999876432        1111111112211    24   88999999999


Q ss_pred             HHHHHHhc--c-cCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           67 RSLVEAVK--R-VDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        67 ~~~~~~~~--~-~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +++.++++  + +|+|||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~  148 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIF  148 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGT
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHh
Confidence            99999998  6 999999998653          24578999999999999988 8999999986654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.85  E-value=6.9e-21  Score=131.10  Aligned_cols=109  Identities=21%  Similarity=0.392  Sum_probs=92.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++....       +.+ ..+++++.+|++|++++.++++  ++|+|||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            68999999999999999999999999999998763221       111 2378899999999999999998  8999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~  122 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATY  122 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGG
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceee
Confidence            998642          24568899999999999988 8999999987655

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.85  E-value=3.5e-21  Score=132.85  Aligned_cols=119  Identities=18%  Similarity=0.113  Sum_probs=93.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEE-EcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI-EASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++..... ...........+++++ .+|++|++++.++++++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH-HHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            346899999999999999999999999999999998621100 0011111112568888 89999999999999999999


Q ss_pred             EEeCcccc-------ceecchHHHHHHHHHHHH-hCCccEEEEecCCccc
Q 033236           80 ICTISGVH-------FRSHNILMQLKLVDAIRE-AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...       .++.|+.++.++++++.+ .+ ++++|++||...|
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~  136 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSA  136 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGT
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHh
Confidence            99998653       245789999999999985 55 7899999987655

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=8.1e-21  Score=131.00  Aligned_cols=117  Identities=21%  Similarity=0.080  Sum_probs=93.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++............  ...+++++.+|++|++++.+++++  +|+|
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            468999999999999999999999999999999987443222222111  235688999999999999999986  6999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCc-cEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNV-KKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.+ + +++|++||...|
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~  142 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMF  142 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGG
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHh
Confidence            99998542          23578899999999999987 5 899999987655

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.85  E-value=3.8e-21  Score=134.99  Aligned_cols=112  Identities=22%  Similarity=0.282  Sum_probs=92.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|+||+++++.|+++| ++|++++|++....    +.+.  ...+++++.+|++|++++.++++++|+|||
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----~~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih  105 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK----INVP--DHPAVRFSETSITDDALLASLQDEYDYVFH  105 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG----GGSC--CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch----hhcc--CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence            5789999999999999999999999 99999999863221    1111  145789999999999999999999999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHh-CCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+. + ++++|++||...|
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vy  155 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSI  155 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC---
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHc
Confidence            998652          2456889999999999988 7 7899999987654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.85  E-value=7e-21  Score=134.22  Aligned_cols=118  Identities=21%  Similarity=0.220  Sum_probs=92.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCch---------------HHHHHhhhhccCCeEEEEcccCChH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDI---------------DKLQMLLSFKKQGAHLIEASFADHR   67 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~---------------~~~~~~~~~~~~~~~~~~~D~~~~~   67 (124)
                      +++++||||+|+||+++++.|+++|++|++++|.......               ............+++++.+|++|++
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            5789999999999999999999999999999986421100               0111111122457899999999999


Q ss_pred             HHHHHhcc--cCEEEEeCcccc-------------ceecchHHHHHHHHHHHHhCCc-cEEEEecCCccc
Q 033236           68 SLVEAVKR--VDVVICTISGVH-------------FRSHNILMQLKLVDAIREAGNV-KKRKLNEGMIPF  121 (124)
Q Consensus        68 ~~~~~~~~--~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ss~~~~  121 (124)
                      ++.+++++  +|+|||+||...             .++.|+.++.++++++.+.+ + +++|++||...|
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vy  159 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEY  159 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGG
T ss_pred             HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHh
Confidence            99999988  999999998542             23578999999999999988 6 599999987655

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.85  E-value=1.9e-21  Score=133.44  Aligned_cols=114  Identities=21%  Similarity=0.268  Sum_probs=88.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeC-CCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQR-PDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +|+++||||+|+||+++++.|+++|++|+++.| ++......  .....+.  ..+++++.+|++|++++.++++++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV--SFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC--HHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH--HHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEE
Confidence            478999999999999999999999999999988 54211100  1111111  125788999999999999999999999


Q ss_pred             EEeCcccc---------ceecchHHHHHHHHHHHHh-CCccEEEEecCCc
Q 033236           80 ICTISGVH---------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~  119 (124)
                      ||+|++..         .++.|+.++.++++++.+. + ++++|++||..
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~  127 (322)
T 2p4h_X           79 FHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGS  127 (322)
T ss_dssp             EECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGG
T ss_pred             EEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHH
Confidence            99997542         3456899999999999987 6 78999999765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.85  E-value=2.3e-20  Score=127.45  Aligned_cols=111  Identities=48%  Similarity=0.753  Sum_probs=90.2

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-chHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |+ +|+++||||+|++|+++++.|++.|++|++++|+++.. ...+.+.+..+...+++++.+|++|++++.++++++|+
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~   80 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV   80 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence            55 67899999999999999999999999999999986433 22333333344467899999999999999999999999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |||+++..     +..++.++++++.+.+.++|+|+++
T Consensus        81 vi~~a~~~-----~~~~~~~l~~aa~~~g~v~~~v~S~  113 (308)
T 1qyc_A           81 VISTVGSL-----QIESQVNIIKAIKEVGTVKRFFPSE  113 (308)
T ss_dssp             EEECCCGG-----GSGGGHHHHHHHHHHCCCSEEECSC
T ss_pred             EEECCcch-----hhhhHHHHHHHHHhcCCCceEeecc
Confidence            99999853     3567789999999986578998644

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.85  E-value=2.5e-21  Score=130.18  Aligned_cols=107  Identities=21%  Similarity=0.252  Sum_probs=92.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++...           ...+++++.+|++|++++.++++++|+|||+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-----------AEAHEEIVACDLADAQAVHDLVKDCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-----------CCTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-----------cCCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence            47899999999999999999999999999999987321           0145789999999999999999999999999


Q ss_pred             Ccccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++...      .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        71 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~  114 (267)
T 3ay3_A           71 GGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTI  114 (267)
T ss_dssp             CSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGS
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHh
Confidence            98642      24578999999999999988 8899999987654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.84  E-value=1.8e-20  Score=127.73  Aligned_cols=110  Identities=19%  Similarity=0.195  Sum_probs=91.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|++|+++++.|+++| ++|++++|+++...   .   ..+...+++++.+|++|++++.++++++|+|||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~---~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA---A---KELRLQGAEVVQGDQDDQVIMELALNGAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH---H---HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH---H---HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence            4789999999999999999999998 99999999873221   1   122245789999999999999999999999999


Q ss_pred             eCcccc--ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           82 TISGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        82 ~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +++...  ..+.++.++.++++++.+.+ ++++|++|+..
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~  117 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLEN  117 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCC
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcc
Confidence            998532  13456788999999999998 89999987654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.84  E-value=5.8e-21  Score=130.59  Aligned_cols=107  Identities=21%  Similarity=0.368  Sum_probs=90.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++....        .....+++++.+|+.|++ +.+++++ |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR--------EFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG--------GGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch--------hhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            58999999999999999999999999999999873321        112467899999999999 8888888 9999999


Q ss_pred             cccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vy  117 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVY  117 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGG
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHh
Confidence            8431          24578999999999999998 8999999987665

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.84  E-value=2.8e-20  Score=129.46  Aligned_cols=114  Identities=17%  Similarity=0.302  Sum_probs=91.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      |+++||||+|+||+++++.|++. |++|++++|++.......   ...+ ...+++++.+|++|++++.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh---hhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            47999999999999999999998 799999998752211111   1111 13578999999999999999998  89999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHh--CCcc-------EEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREA--GNVK-------KRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~-------~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.  + ++       ++|++||...|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~  137 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVY  137 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGG
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHh
Confidence            99998643          3467899999999999988  7 66       99999986544

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.84  E-value=1.6e-20  Score=126.88  Aligned_cols=105  Identities=17%  Similarity=0.293  Sum_probs=85.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++||||+|++|+++++.|+++  |++|++++|+++...        .+...+++++.+|++|++++.++++++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ--------ALAAQGITVRQADYGDEAALTSALQGVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH--------HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh--------hhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            4899999999999999999998  999999999873221        112356889999999999999999999999999


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      ++..  ...|+.++.++++++.+.+ ++++|++||...
T Consensus        73 a~~~--~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~  107 (286)
T 2zcu_A           73 SSSE--VGQRAPQHRNVINAAKAAG-VKFIAYTSLLHA  107 (286)
T ss_dssp             C----------CHHHHHHHHHHHHT-CCEEEEEEETTT
T ss_pred             CCCC--chHHHHHHHHHHHHHHHcC-CCEEEEECCCCC
Confidence            9853  2467889999999999998 899999997654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.2e-20  Score=130.77  Aligned_cols=117  Identities=18%  Similarity=0.202  Sum_probs=91.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-h---ccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-F---KKQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++........+.... .   ...+++++.+|++|++++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999864321111111100 0   234688999999999999999986  69


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCc---cEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNV---KKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ +   +++|++||...|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~  160 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELY  160 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGT
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhh
Confidence            9999998643          24578899999999999987 6   799999987655

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=5.4e-20  Score=127.08  Aligned_cols=116  Identities=23%  Similarity=0.368  Sum_probs=92.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++|++|++++|....... ..+........+++++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRS-VLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTT-HHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchh-HHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            479999999999999999999999999999875432211 1122222223568899999999999999987  4999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +||...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~  128 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVY  128 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGG
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHh
Confidence            998542          24578999999999999988 7899999987654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.84  E-value=4.1e-20  Score=126.81  Aligned_cols=107  Identities=15%  Similarity=0.252  Sum_probs=90.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi   80 (124)
                      .|+++||||+|+||+++++.|+++|++|++++|++.. ..           .+++++.+|++|++++.+++++  +|+||
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------PNVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------ceeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            4789999999999999999999999999999998732 10           1688999999999999999986  99999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+...          .++.|+.++.++++++.+.+.++++|++||...|
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~  130 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEY  130 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGT
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhc
Confidence            9998643          2457899999999999776227899999987655

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.83  E-value=1.4e-20  Score=128.54  Aligned_cols=109  Identities=11%  Similarity=0.157  Sum_probs=91.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d   77 (124)
                      |+|+++||||+|++|+++++.|+++  |++|++++|++...     . .    ..+++++.+|++|++++.++++  ++|
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~-~----~~~~~~~~~D~~d~~~~~~~~~~~~~d   70 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-----D-V----VNSGPFEVVNALDFNQIEHLVEVHKIT   70 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-----H-H----HHSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-----c-c----cCCCceEEecCCCHHHHHHHHhhcCCC
Confidence            3578999999999999999999998  89999999987331     1 1    1246789999999999999998  899


Q ss_pred             EEEEeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||+|+...         .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        71 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~  122 (312)
T 2yy7_A           71 DIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVF  122 (312)
T ss_dssp             EEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGC
T ss_pred             EEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHh
Confidence            9999998642         24578899999999999988 8899999987655

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.83  E-value=1.1e-20  Score=130.74  Aligned_cols=113  Identities=17%  Similarity=0.167  Sum_probs=93.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-------CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-------HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      |++|+++||||+|+||+++++.|+++|       ++|++++|++.....        ....+++++.+|++|++++.+++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence            457899999999999999999999999       899999998632211        12356889999999999999999


Q ss_pred             c-ccCEEEEeCcccc---------ceecchHHHHHHHHHHHHhC----CccEEEEecCCccc
Q 033236           74 K-RVDVVICTISGVH---------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMIPF  121 (124)
Q Consensus        74 ~-~~d~vi~~a~~~~---------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~~~  121 (124)
                      + ++|+|||+|+...         .++.|+.++.++++++.+.+    .++++|++||...|
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~  145 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF  145 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGC
T ss_pred             hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhh
Confidence            5 8999999998643         24578999999999998764    25899999987655

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.83  E-value=1.6e-19  Score=123.24  Aligned_cols=109  Identities=41%  Similarity=0.638  Sum_probs=88.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC-CCCch-HHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD-IGLDI-DKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~-~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|++ +.... .+.+....+...+++++.+|++|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999986 22222 22233333345679999999999999999999999999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+++...     ..++.++++++.+.+.++|+|+++
T Consensus        82 ~~a~~~~-----~~~~~~l~~aa~~~g~v~~~v~S~  112 (307)
T 2gas_A           82 CAAGRLL-----IEDQVKIIKAIKEAGNVKKFFPSE  112 (307)
T ss_dssp             ECSSSSC-----GGGHHHHHHHHHHHCCCSEEECSC
T ss_pred             ECCcccc-----cccHHHHHHHHHhcCCceEEeecc
Confidence            9998643     677899999999886468998643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=8.3e-20  Score=136.90  Aligned_cols=118  Identities=23%  Similarity=0.314  Sum_probs=96.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...... ...+......+++++.+|++|++++.++++  ++|+|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS-VARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHH-HHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHH-HHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            357899999999999999999999999999999976433221 222222234678899999999999999998  79999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vy  139 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVY  139 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGG
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHh
Confidence            99998643          24578999999999999988 8999999987654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.83  E-value=1.6e-19  Score=123.98  Aligned_cols=108  Identities=33%  Similarity=0.586  Sum_probs=88.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC-CCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD-IGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|++|+++++.|++.|++|++++|++ +.......+.+..+...+++++.+|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999986 33222333333333456799999999999999999999999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +++...     ..++.++++++.+.+.++|+|++
T Consensus        84 ~a~~~~-----~~~~~~l~~aa~~~g~v~~~v~S  112 (321)
T 3c1o_A           84 ALPFPM-----ISSQIHIINAIKAAGNIKRFLPS  112 (321)
T ss_dssp             CCCGGG-----SGGGHHHHHHHHHHCCCCEEECS
T ss_pred             CCCccc-----hhhHHHHHHHHHHhCCccEEecc
Confidence            998533     66789999999988646899853

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.82  E-value=5.6e-20  Score=126.15  Aligned_cols=98  Identities=23%  Similarity=0.389  Sum_probs=85.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      |++|+++||||+|++|+++++.|+++|++|++++|+.                      .+|++|++++.++++  ++|+
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~   58 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQ   58 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCE
Confidence            7789999999999999999999999999999987753                      279999999999999  8999


Q ss_pred             EEEeCcccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...           .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vy  111 (321)
T 1e6u_A           59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIY  111 (321)
T ss_dssp             EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGS
T ss_pred             EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHc
Confidence            999998653           23568899999999999998 8999999987665

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.82  E-value=1.4e-19  Score=122.56  Aligned_cols=114  Identities=20%  Similarity=0.198  Sum_probs=88.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...     +........+++++.+|++|+++++++++       
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL-----DDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-----HHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999987221     12212224578999999999999998887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHH----HHHHHHHHHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQ----LKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~----~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|+||||||...              .++.|+.++    +.+++.+.+.+ ..++|++||...+
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~  142 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ  142 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc
Confidence            5899999998542              235688884    44555556666 6899999987654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.82  E-value=9.5e-20  Score=124.10  Aligned_cols=114  Identities=14%  Similarity=0.113  Sum_probs=93.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++     ...+........++.++.+|++|+++++++++   ++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDT-----RKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            468899999999999999999999999999999986     22222222124578999999999999999988   5799


Q ss_pred             EEEeCcccc------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||||...            .++.|+.++.++++++.+.. .+|+|++||...+
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~  143 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHW  143 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGT
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhc
Confidence            999998542            24678999999999999987 6899999987644

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.3e-19  Score=123.02  Aligned_cols=120  Identities=9%  Similarity=0.037  Sum_probs=90.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|+.........+........++.++.+|++|+++++++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            45688999999999999999999999999999999652111111222222224578899999999999998886      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  167 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGL  167 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccc
Confidence             5899999998542              24568888888888874    444 4789999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=6.8e-20  Score=127.95  Aligned_cols=118  Identities=19%  Similarity=0.217  Sum_probs=88.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-h--ccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-F--KKQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|+++.......+.... .  ...+++++.+|++|++++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            378999999999999999999999999999999863211111111100 0  135688999999999999999986  79


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCc---cEEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNV---KKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ +   +++|++||...|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~  136 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELY  136 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGG
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhh
Confidence            9999998542          13568899999999999987 6   799999987654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.82  E-value=5.3e-20  Score=125.94  Aligned_cols=106  Identities=29%  Similarity=0.404  Sum_probs=88.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++|++|++++|......    .   .+ ..+++++.+|++|++++.++++  ++|+|+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~---~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----E---NV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----G---GS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----h---hc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999999999988642211    1   11 1467889999999999999998  7999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +|+...          .++.|+.++.++++++.+.+ ++++|++||.
T Consensus        73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~  118 (311)
T 2p5y_A           73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTG  118 (311)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCC
Confidence            998542          24578999999999999988 7899999986

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.82  E-value=2e-19  Score=123.51  Aligned_cols=104  Identities=43%  Similarity=0.717  Sum_probs=85.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      ++++||||+|++|+++++.|+++|++|++++|+++..    ......+...+++++.+|++|++++.++++++|+|||++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK----TTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC----HHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch----hhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4899999999999999999999999999999987421    111222234678999999999999999999999999999


Q ss_pred             ccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           84 SGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +..     +..++.++++++.+.+.++++|+++
T Consensus        88 ~~~-----~~~~~~~l~~aa~~~g~v~~~v~S~  115 (318)
T 2r6j_A           88 AFP-----QILDQFKILEAIKVAGNIKRFLPSD  115 (318)
T ss_dssp             CGG-----GSTTHHHHHHHHHHHCCCCEEECSC
T ss_pred             chh-----hhHHHHHHHHHHHhcCCCCEEEeec
Confidence            853     2567899999999986468998744

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.82  E-value=8.4e-20  Score=128.07  Aligned_cols=117  Identities=21%  Similarity=0.172  Sum_probs=91.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-h--ccC-CeEEEEcccCChHHHHHHhcc--cC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-F--KKQ-GAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~--~~~-~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++........+.... .  ... +++++.+|++|++++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999874311111111100 0  012 788999999999999999986  69


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCcc-----EEEEecCCccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVK-----KRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~ss~~~~  121 (124)
                      +|||+|+...          .++.|+.++.++++++.+.+ ++     ++|++||...|
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vy  166 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMF  166 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGG
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHh
Confidence            9999998643          24578899999999999887 66     99999987655

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.82  E-value=5.3e-20  Score=126.02  Aligned_cols=107  Identities=21%  Similarity=0.360  Sum_probs=85.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+++||||+|+||+++++.|+++|+.+.+..|++...         .....+++++.+|+++ +++.++++++|+|||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~---------~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNE---------EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCG---------GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCCh---------hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            6899999999999999999999994444433433111         1124578899999999 99999999999999999


Q ss_pred             cccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           84 SGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +...          .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vy  118 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVY  118 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGG
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHh
Confidence            8431          24578999999999999998 8999999987765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1e-19  Score=131.42  Aligned_cols=118  Identities=16%  Similarity=0.184  Sum_probs=94.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC---CCeEEEEeCCCCCCchHHHHHhh--------------hhccCCeEEEEcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ---GHETYVLQRPDIGLDIDKLQMLL--------------SFKKQGAHLIEASFA   64 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~~D~~   64 (124)
                      .+|+++||||+|+||++++++|++.   |++|++++|++.... ...+...              .....+++++.+|++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            3689999999999999999999998   899999999874221 1111111              112368999999998


Q ss_pred             ------ChHHHHHHhcccCEEEEeCcccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           65 ------DHRSLVEAVKRVDVVICTISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        65 ------~~~~~~~~~~~~d~vi~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                            +.+.+.++++++|+|||+|+...      .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~  218 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVG  218 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGG
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhc
Confidence                  66789999999999999998653      34678999999999999988 8899999986654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.82  E-value=3.1e-19  Score=123.36  Aligned_cols=109  Identities=17%  Similarity=0.245  Sum_probs=89.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~   81 (124)
                      |+++||||+|++|+++++.|+++ |++|++++|++...     ...  ....+++++.+|++| .+.+.++++++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-----SRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-----GGG--TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchH-----HHh--hcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999998 89999999987211     111  124578999999998 4678889999999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+.+  +++|++||...|
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~  121 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVY  121 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGG
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHc
Confidence            998542          23567889999999999887  799999987655

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.81  E-value=2.5e-19  Score=120.86  Aligned_cols=111  Identities=16%  Similarity=0.164  Sum_probs=89.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.        +..+.....++.++.+|++|+++++++++       
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV--------ERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            457899999999999999999999999999999986        22333344578899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~  150 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK  150 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC
Confidence            5899999998542              24578888888777664    455 5799999987654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.81  E-value=4e-19  Score=122.91  Aligned_cols=120  Identities=20%  Similarity=0.271  Sum_probs=92.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++.+|+..+......+.....   ...++..+.+|++|++++.++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999998544333333322221   24578999999999999999887   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                          ++|++|||||...              .+++|+.++.++++++    .+.+ ..++|++||...+
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~  150 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSA  150 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhc
Confidence                6999999998431              2467899999998888    4555 5799999976543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.81  E-value=6.7e-20  Score=127.57  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=92.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-----CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-----HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   75 (124)
                      +|+++||||+|++|+++++.|+++|     ++|++++|+++...         ....+++++.+|++|++++.+++++  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcCC
Confidence            4789999999999999999999999     99999999874321         1245789999999999999999998  


Q ss_pred             -cCEEEEeCcccc-----ceecchHHHHHHHHHHHHh--CCccEEE-------EecCCccc
Q 033236           76 -VDVVICTISGVH-----FRSHNILMQLKLVDAIREA--GNVKKRK-------LNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~i-------~~ss~~~~  121 (124)
                       +|+|||+|+...     ..+.|+.++.++++++.+.  + +++++       ++||...|
T Consensus        72 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           72 DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             TCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGT
T ss_pred             CCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhc
Confidence             999999998542     4567899999999999987  6 78997       67766543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.81  E-value=3.7e-19  Score=119.54  Aligned_cols=114  Identities=18%  Similarity=0.163  Sum_probs=86.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++    +...+....+ ...+.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD----EEGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986    2211111122 2347889999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++.+++    .+.+ ..++|++||...+
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  144 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL  144 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhc
Confidence            6999999998542              1346777776555554    4555 5799999987654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.81  E-value=2.5e-20  Score=127.07  Aligned_cols=101  Identities=21%  Similarity=0.229  Sum_probs=84.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      |++|+++||||+|++|+++++.|+++|+      +..             .....++.+.+|++|++++.+++++  +|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------------~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------------EDWVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------------CEEEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------------ccccccCceecccCCHHHHHHHHhhcCCCE
Confidence            6789999999999999999999999998      111             0122345668999999999999987  999


Q ss_pred             EEEeCcccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...           ..+.|+.++.++++++.+.+ ++++|++||...|
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vy  117 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIF  117 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhc
Confidence            999998653           35678999999999999998 8999999987655

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.81  E-value=3.3e-19  Score=118.25  Aligned_cols=116  Identities=15%  Similarity=0.103  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+ ..++.++.+|++|+++++++++      
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQ----RLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            77889999999999999999999999999999999862    222222222 2368899999999999998876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+.-  .-.++|++||...+
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~  139 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ  139 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECC
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhc
Confidence             4799999998542              24578899988888886531  01389999876543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.81  E-value=6.4e-19  Score=118.37  Aligned_cols=118  Identities=12%  Similarity=0.114  Sum_probs=88.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+. ..+.+......++.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHE-AARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999998621111 1111111113568899999999999998887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  148 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAV  148 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc
Confidence            6899999998542              134677888887777753    45 5799999987654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.81  E-value=6.6e-20  Score=125.58  Aligned_cols=102  Identities=15%  Similarity=0.130  Sum_probs=68.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++..              .+  ++.+|++|++++.+++++  +|+|
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~v   64 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------PK--FEQVNLLDSNAVHHIIHDFQPHVI   64 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence            35889999999999999999999999999999987611              12  788999999999999985  8999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~  114 (315)
T 2ydy_A           65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVF  114 (315)
T ss_dssp             EECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred             EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHc
Confidence            99998542          34578999999999999998 5 89999987654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.81  E-value=4.8e-19  Score=118.84  Aligned_cols=114  Identities=14%  Similarity=0.071  Sum_probs=89.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|+.    +...+.... ...++.++.+|++|++++.++++       +
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDI----ERARQAAAE-IGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHH-hCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999986    222222222 24568899999999999999887       6


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++++++.+..    ...++|++||...+
T Consensus        83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (259)
T 4e6p_A           83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR  146 (259)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc
Confidence            999999998542              13478889888888886542    12589999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.81  E-value=2.4e-19  Score=119.53  Aligned_cols=117  Identities=15%  Similarity=0.106  Sum_probs=89.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|++.+..+...+.... ...++.++++|++|+++++++++       
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-KGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999888652111111111111 24568899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++    .+.+ ..++|++||...
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~  144 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVG  144 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhh
Confidence            5899999998542              2457889999998888    4455 579999998653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.81  E-value=6.7e-19  Score=117.37  Aligned_cols=115  Identities=13%  Similarity=0.109  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      .+|+++||||+|+||+++++.|+++|++|++++|++.    ......+.+  ...++.++.+|++|++++.++++     
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD----AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999862    111111121  23468899999999999999887     


Q ss_pred             --ccCEEEEeCcccc-------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH-------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        ++|+||||||...             .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~  150 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE  150 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc
Confidence              7999999998542             13467888888888875    445 5799999987644

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.81  E-value=6.7e-19  Score=118.40  Aligned_cols=117  Identities=21%  Similarity=0.183  Sum_probs=89.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+. ..+.+......++.++.+|++|+++++++++       
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDA-CVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46889999999999999999999999999999998622111 1111111122578899999999999998876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.+.    + ..++|++||...
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~  150 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITG  150 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhh
Confidence            6899999998542              1457888888888887664    5 579999997654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.81  E-value=1e-18  Score=117.90  Aligned_cols=116  Identities=10%  Similarity=0.188  Sum_probs=90.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++    .........+.. .++.++.+|++|+++++++++     
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD----DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh----hHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999976    221122222222 268999999999999999887     


Q ss_pred             --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                        ++|+||||||...                .++.|+.++.++++++.+.    + ..++|++||...+
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  157 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSF  157 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeecccc
Confidence              6899999998532                2356788888888888764    4 5799999987654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=5.4e-19  Score=117.29  Aligned_cols=116  Identities=16%  Similarity=0.090  Sum_probs=90.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|+||+++++.|+++|  ++|++++|++...     +.+......++.++.+|++|++++.++++    
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-----TELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-----HHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH-----HHHHhccCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            778899999999999999999999999  9999999986322     11222234578999999999999998887    


Q ss_pred             -----ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----------CC----ccEEEEecCCcc
Q 033236           75 -----RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----------GN----VKKRKLNEGMIP  120 (124)
Q Consensus        75 -----~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----------~~----~~~~i~~ss~~~  120 (124)
                           ++|+||||||...               .++.|+.++.++++++.+.          +.    ..++|++||...
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence                 7999999998543               1346788888888777543          20    368999998654


Q ss_pred             c
Q 033236          121 F  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus       156 ~  156 (250)
T 1yo6_A          156 S  156 (250)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.80  E-value=7.5e-19  Score=117.65  Aligned_cols=115  Identities=13%  Similarity=0.138  Sum_probs=87.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++    +...+..+.+ ..++.++.+|++|+++++++++      
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD----EEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999999986    2221222222 3457899999999999998887      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHH----HHHHHHHhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLK----LVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.+    +++.+.+.+ ..++|++||...+
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  142 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL  142 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhc
Confidence             6999999998542              13456777764    444555566 5899999987644

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.80  E-value=1.3e-18  Score=116.09  Aligned_cols=115  Identities=11%  Similarity=0.108  Sum_probs=87.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.+   ...+.... ...++.++++|++|+++++++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchh---HHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999998621   11111211 23568899999999999988865       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHH----HHHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDA----IREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.+++++    +.+.+ ..++|++||...+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  145 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW  145 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc
Confidence            5899999998542              134678887777777    44555 5799999987654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.80  E-value=1.9e-19  Score=123.28  Aligned_cols=103  Identities=17%  Similarity=0.224  Sum_probs=88.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI   80 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   80 (124)
                      +++||||+|+||+++++.|+++  |++|++++|++...             .+++++.+|++|++++.++++  ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence            5899999999999999999998  79999999876221             146789999999999999998  899999


Q ss_pred             EeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+...         .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus        68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~  116 (317)
T 3ajr_A           68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVF  116 (317)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGC
T ss_pred             ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHh
Confidence            9998542         24568899999999999988 8999999987665

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.80  E-value=8.9e-19  Score=118.33  Aligned_cols=114  Identities=15%  Similarity=0.110  Sum_probs=90.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+..    ...+ ..++.++.+|++|+++++++++       
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA----AASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH----HHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH----HHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999987432211    1121 4578899999999999999887       


Q ss_pred             ccCEEEEeCcccc----------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH----------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...                .++.|+.++.++++++    .+.+ ..++|++||...+
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  150 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAH  150 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHc
Confidence            6899999998541                2356888999988888    4455 5799999987654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.80  E-value=1.3e-18  Score=116.72  Aligned_cols=115  Identities=8%  Similarity=0.040  Sum_probs=87.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++..    ..+..+.+.    ..++.++.+|++|+++++++++   
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREK----LEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998621    111111111    2268899999999999999887   


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...              .++.|+.++.++.+++.    +.+ ..++|++||...+
T Consensus        82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  148 (260)
T 2z1n_A           82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLL  148 (260)
T ss_dssp             HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc
Confidence               5999999998432              13467777766666554    455 5799999987654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=5.5e-20  Score=119.71  Aligned_cols=105  Identities=15%  Similarity=0.256  Sum_probs=90.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+|+++||||+|++|+++++.|+++|+  +|++++|++..            ...+++++.+|++|++++.+++  +|+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~v   69 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTA   69 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEE
Confidence            457899999999999999999999997  99999998732            1357888999999999998888  9999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||++|...        ..+.|..++.++++++.+.+ ++++|++||...|
T Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~  118 (215)
T 2a35_A           70 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGAD  118 (215)
T ss_dssp             EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCC
T ss_pred             EECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccC
Confidence            99998643        23568899999999999988 7899999987654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.80  E-value=1.1e-18  Score=117.12  Aligned_cols=115  Identities=16%  Similarity=0.138  Sum_probs=88.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++.++++     
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQK----ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    211112222  13468899999999999988873     


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  150 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA  150 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc
Confidence               5999999998532              23567888888888874    344 5799999987544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.80  E-value=8.1e-19  Score=117.65  Aligned_cols=113  Identities=13%  Similarity=0.177  Sum_probs=89.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+    +....+ ..++.++.+|++|+++++++++       
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH----HHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH----HHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            4678999999999999999999999999999999873322    111111 3568899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------------ceecchHHHHHHHHHHHHh----------CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------------FRSHNILMQLKLVDAIREA----------GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------------~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~ss~~~  120 (124)
                      ++|+||||||...                    .++.|+.++.++++++.+.          + ..++|++||...
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~  160 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAA  160 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHH
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhh
Confidence            6999999998531                    1346788888999888765          4 578999998754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.80  E-value=1.5e-18  Score=121.22  Aligned_cols=110  Identities=17%  Similarity=0.199  Sum_probs=89.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcc-cCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS-FADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|+++...   .+.+.  ...+++++.+| ++|++++.++++++|+|||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~l~--~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI---AEELQ--AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH---HHHHH--TSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh---HHHHh--hcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            578999999999999999999999999999999874321   11111  12478899999 9999999999999999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +++... ...|..+ .++++++.+.+.++++|++||..
T Consensus        80 ~a~~~~-~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           80 NTTSQA-GDEIAIG-KDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             CCCSTT-SCHHHHH-HHHHHHHHHHSCCSEEEEEECCC
T ss_pred             cCCCCC-cHHHHHH-HHHHHHHHHcCCccEEEEeCCcc
Confidence            987542 2456666 99999999886358999999764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.80  E-value=1.2e-18  Score=117.98  Aligned_cols=115  Identities=17%  Similarity=0.110  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|+++++++++     
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE----GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999862    111111122  13468899999999999988876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh------CCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA------GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~------~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+.      + ..++|++||...+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~  164 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK  164 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccc
Confidence              5899999998532              2356888999988887654      4 5799999987543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.80  E-value=1.6e-18  Score=115.85  Aligned_cols=115  Identities=15%  Similarity=0.146  Sum_probs=88.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++.++++     
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEA----MATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999862    111111111  23568899999999999998886     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|+||||||...               .++.|+.++.++++++.+    .+ ..+++++||...+
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~  154 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGL  154 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhc
Confidence              5899999998532               135678888888888765    35 5799999976543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.80  E-value=2.1e-19  Score=124.05  Aligned_cols=119  Identities=13%  Similarity=0.078  Sum_probs=88.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++...+.............++.++.+|++|++++.++++       +
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP   87 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999999999872221111111111112278899999999999999886       4


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---------CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---------NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~ss~~~~  121 (124)
                      +|+||||||...              .+++|+.++.++++++.+..         ...++|++||...+
T Consensus        88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~  156 (319)
T 3ioy_A           88 VSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAF  156 (319)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccc
Confidence            799999998531              24578899999888886642         12479999987654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.80  E-value=8.8e-19  Score=117.28  Aligned_cols=117  Identities=14%  Similarity=0.104  Sum_probs=89.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++...+... +.+.. ...++.++.+|++|++++.++++      +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-AEIEA-AGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHh-cCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            4678999999999999999999999999999999873332221 11111 24568899999999999999887      5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  146 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASL  146 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHc
Confidence            799999998542              13567888888777764    344 4699999976543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.80  E-value=1.1e-18  Score=117.65  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=86.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|+.     ...+........++.++.+|++|+++++++++       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE-----DKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986     22222222224578999999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++.+++.    +.+ ..++|++||...+
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~  164 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGV  164 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC---
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHc
Confidence            5899999998542              13568888666666654    455 5799999987644

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.80  E-value=1e-18  Score=117.47  Aligned_cols=107  Identities=12%  Similarity=0.112  Sum_probs=87.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....           ....+.++.+|++|+++++++++       
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            467899999999999999999999999999999987321           23468899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLV  158 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhh
Confidence            6999999998542              23578889888888874    455 579999987654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.80  E-value=5.7e-19  Score=117.92  Aligned_cols=112  Identities=13%  Similarity=0.169  Sum_probs=87.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++     ...+............+++|++|+++++++++       +
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSE-----SGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999986     22222222123457789999999999999887       5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      +|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~  145 (248)
T 3op4_A           84 VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVG  145 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhh
Confidence            899999998542              245688888888888754    44 479999998653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.80  E-value=5.5e-19  Score=119.54  Aligned_cols=102  Identities=16%  Similarity=0.094  Sum_probs=82.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |+|+++|||+ |++|+++++.|+++|++|++++|++.        ....+...+++++.+|++|.+     ++++|+|||
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~   69 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPD--------QMEAIRASGAEPLLWPGEEPS-----LDGVTHLLI   69 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGG--------GHHHHHHTTEEEEESSSSCCC-----CTTCCEEEE
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChh--------hhhhHhhCCCeEEEecccccc-----cCCCCEEEE
Confidence            4589999998 99999999999999999999999871        122223467999999999955     788999999


Q ss_pred             eCccccceecchHHHHHHHHHHHH--hCCccEEEEecCCccc
Q 033236           82 TISGVHFRSHNILMQLKLVDAIRE--AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~ss~~~~  121 (124)
                      +++.....   ...+.++++++.+  .+ ++++|++||...|
T Consensus        70 ~a~~~~~~---~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vy  107 (286)
T 3ius_A           70 STAPDSGG---DPVLAALGDQIAARAAQ-FRWVGYLSTTAVY  107 (286)
T ss_dssp             CCCCBTTB---CHHHHHHHHHHHHTGGG-CSEEEEEEEGGGG
T ss_pred             CCCccccc---cHHHHHHHHHHHhhcCC-ceEEEEeecceec
Confidence            99865432   3346789999988  56 7899999987665

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.80  E-value=1.1e-18  Score=117.57  Aligned_cols=119  Identities=18%  Similarity=0.159  Sum_probs=86.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...+... +..... ...++.++.+|++|+++++++++     
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999862211111 111111 14568899999999999998886     


Q ss_pred             --ccCEEEEeCccccc---------------eecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVHF---------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||....               ++.|+.++.++.+++    .+.+ ..++|++||...+
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  156 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI  156 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc
Confidence              58999999985321               245666666555544    4555 5799999987543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.80  E-value=1.1e-18  Score=118.29  Aligned_cols=114  Identities=16%  Similarity=0.086  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++     ...+........++.++.+|++|+++++++++       
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE-----DAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986     22222222224578899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  164 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTAT  164 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhC
Confidence            5899999998532              134788888888888754    33 4699999987654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=6.4e-19  Score=119.25  Aligned_cols=118  Identities=16%  Similarity=0.136  Sum_probs=86.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|++...+. ..+.+.... ...+.++.+|++|++++.++++      
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHH-HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999998621111 111111111 2357889999999999998876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHH----HHHHHHHHHHhCCc--cEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILM----QLKLVDAIREAGNV--KKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~--~~~i~~ss~~~~  121 (124)
                       ++|+||||||...              .++.|+.+    +..+++.+.+.+ .  .++|++||...+
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~  176 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGH  176 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhc
Confidence             6899999998532              13456777    566666666665 4  699999987544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.79  E-value=1.9e-18  Score=115.88  Aligned_cols=117  Identities=13%  Similarity=0.177  Sum_probs=90.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+.  ..++.++.+|++|+++++++++    
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKE----KLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999872    2222222222  3468899999999999998886    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...              .++.|+.++.++.+++.+    .+...++|++||...+
T Consensus        80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  147 (257)
T 3imf_A           80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW  147 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc
Confidence               5899999998431              245788888888888743    2214689999987644

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.79  E-value=1.4e-18  Score=116.22  Aligned_cols=116  Identities=16%  Similarity=0.082  Sum_probs=88.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.   ....+.+.. ...++.++.+|++|++++.++++      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIAR-HGVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999873   122222211 23467889999999999999887      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++.+++    .+.+ ..++|++||...+
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  142 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGL  142 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhc
Confidence             6999999998532              1345666665555554    4555 6899999987654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.79  E-value=8.8e-19  Score=116.92  Aligned_cols=115  Identities=20%  Similarity=0.144  Sum_probs=89.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++    +...+.... ...++.++.+|++|+++++++++      
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA----EGAKAAAAS-IGKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH----HHHHHHHHH-HCTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999986    222222222 24678899999999999999887      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||||...              .++.|+.++.++++++    .+.+...++|++||...
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF  143 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhh
Confidence             5899999998542              2356888888888874    44442468999998654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.79  E-value=7.3e-19  Score=117.36  Aligned_cols=115  Identities=16%  Similarity=0.107  Sum_probs=85.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|+++++++++     
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE----AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999862    222222222  24568899999999999999887     


Q ss_pred             --ccCEEEEeCccc-----------------cceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGV-----------------HFRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~-----------------~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||..                 ..++.|+.++.++.+++    .+.+ ..++|++||...|
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  152 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW  152 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC----
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc
Confidence              689999999862                 12356788866655555    4455 5789999987654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.79  E-value=2.5e-18  Score=114.02  Aligned_cols=115  Identities=20%  Similarity=0.211  Sum_probs=88.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d   77 (124)
                      |.+|+++||||+|+||++++++|+++|++|++++|++    ....+....  ..+++++.+|++|++++++++++   +|
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN----SDLVSLAKE--CPGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHh--ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            3468899999999999999999999999999999986    111111111  23577889999999999999874   89


Q ss_pred             EEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           78 VVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      +||||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  140 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc
Confidence            9999998432              2356788888888887654    313689999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.79  E-value=1.8e-18  Score=116.14  Aligned_cols=115  Identities=17%  Similarity=0.168  Sum_probs=85.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHh------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAV------   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~------   73 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|+++++++++++      
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEY----ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    111111122  1346889999999999998887      


Q ss_pred             --cccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           74 --KRVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        74 --~~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        .++|+||||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  155 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGV  155 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc
Confidence              45899999998532              13568888889888884    455 6899999987644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.79  E-value=1.3e-18  Score=115.50  Aligned_cols=116  Identities=14%  Similarity=0.107  Sum_probs=86.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||++++++|+++|++|++++|++...+. ..+.+......++.++.+|++|+++++++++       
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKA-VAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999998621111 0111111123568899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~  119 (124)
                      ++|+||||||...              .++.|+.++.++++++    .+.+ ..++|++||..
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  146 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVV  146 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHH
Confidence            6999999998542              2356788886666555    4455 68999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.79  E-value=1.6e-18  Score=115.63  Aligned_cols=117  Identities=15%  Similarity=0.119  Sum_probs=89.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|+++++++++    
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   80 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVE----KLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE   80 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999862    211111222  13468899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC--ccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN--VKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...              .++.|+.++.++++++.+...  ..++|++||...+
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (247)
T 2jah_A           81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGR  146 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhc
Confidence               5899999998532              135688888888888865320  1589999986543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.79  E-value=1.7e-18  Score=116.04  Aligned_cols=120  Identities=12%  Similarity=0.103  Sum_probs=90.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...... .+.+......++.++.+|++|++++++++++     
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV-TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH-HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHH-HHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999976432211 1222111245788999999999999888764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  156 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQ  156 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhh
Confidence              899999998542              1356788888888887653    213689999986543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.79  E-value=2.3e-18  Score=115.65  Aligned_cols=115  Identities=13%  Similarity=0.091  Sum_probs=87.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++    ....+....+ ..++.++.+|++|+++++++++       
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV----MAAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999986    2211211121 2267899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      ++|+||||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK  150 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence            6999999998532              1346788888888887653    213689999976543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.79  E-value=1.3e-18  Score=115.85  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=86.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|+..   ....+..+.+  ...++.++.+|++|+++++++++    
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE---QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998431   1111111111  13468899999999999999887    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                         ++|++|||||...              .++.|+.++.++.+++.    +.+ ..++|++||...
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~  144 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVG  144 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHh
Confidence               5899999998542              13567788666666554    455 579999998754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.79  E-value=2.5e-18  Score=114.16  Aligned_cols=115  Identities=11%  Similarity=0.097  Sum_probs=83.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++|+++||||+|+||++++++|+++|++|+++ .|++... ....+.... ...++.++.+|++|+++++++++      
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL-DATAEEFKA-AGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHH-HHHHHHHHH-TTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHH-HHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46889999999999999999999999999998 4554211 111111111 23568899999999999998887      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       ++|+||||||...              .++.|+.++.++++++.+    .+ ..++|++||..
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~  144 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIA  144 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChh
Confidence             6899999998542              135678888777777754    45 57999999864

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.79  E-value=2.1e-18  Score=115.62  Aligned_cols=115  Identities=13%  Similarity=0.111  Sum_probs=88.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+++    ...+....+  ...++.++.+|++|++++.++++     
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE----NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    111111122  23468899999999999988876     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...               .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  155 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAY  155 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhc
Confidence              6999999998532               13567888888877765    345 5799999987654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.79  E-value=2.7e-19  Score=124.57  Aligned_cols=109  Identities=17%  Similarity=0.276  Sum_probs=86.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~   75 (124)
                      ++|+++||||+|+||+++++.|+++| ++|++++|++....      ...+  .++. +.+|+++++.+.++++     +
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------~~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK------FVNL--VDLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG------GGGT--TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch------hhcc--cCce-EeeecCcHHHHHHHHhhcccCC
Confidence            35789999999999999999999999 99999999863210      1111  1233 7899999999999987     5


Q ss_pred             cCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+|||+|+...        .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus       116 ~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~  167 (357)
T 2x6t_A          116 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATY  167 (357)
T ss_dssp             CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGG
T ss_pred             CCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHh
Confidence            999999998643        24578999999999999998 7 99999987654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.79  E-value=7.6e-19  Score=119.11  Aligned_cols=118  Identities=15%  Similarity=0.130  Sum_probs=88.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.+.....  .++.++.+|++|++++.++++     
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGA-VQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999986221111 111111111  267899999999999998876     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...               .++.|+.++.++++++.+..   .-.++|++||...
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  154 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA  154 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH
Confidence              4799999998521               23568899988888876643   1349999998654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.79  E-value=2.5e-18  Score=116.57  Aligned_cols=115  Identities=11%  Similarity=0.082  Sum_probs=89.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++    +...+....+  ...++.++.+|++|++++.++++     
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA----KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999986    2222222222  24568899999999999988876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH------hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE------AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~------~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+      .+ ..++|++||...+
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~  166 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGK  166 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGT
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhc
Confidence              4899999998542              235788999999998765      44 4699999987644

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.79  E-value=8.7e-19  Score=118.17  Aligned_cols=116  Identities=16%  Similarity=0.111  Sum_probs=89.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|+++++++++    
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   77 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQA----RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD   77 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999862    222222222  23467899999999999988876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~  144 (264)
T 3tfo_A           78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGAL  144 (264)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHc
Confidence               5899999998542              135678888877777654    44 5799999987654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.79  E-value=1.9e-18  Score=115.96  Aligned_cols=119  Identities=17%  Similarity=0.115  Sum_probs=89.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.. .+ ...+........++.++.+|++|+++++++++     
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHH-HHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHH-HHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            457889999999999999999999999999999998721 11 11111111113468899999999999998886     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  146 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL  146 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhC
Confidence              5899999998532              134677888887777754    45 5799999987654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=3.2e-18  Score=114.66  Aligned_cols=111  Identities=22%  Similarity=0.235  Sum_probs=86.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++..     .+..+.+.  . .++.+|++|+++++++++       
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-----KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-----HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999998732     11122222  3 789999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  140 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL  140 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcccccc
Confidence            5899999998542              235678888888887754    34 5799999986543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.79  E-value=2e-18  Score=117.92  Aligned_cols=117  Identities=22%  Similarity=0.180  Sum_probs=89.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.+......++.++.+|++|+++++++++       
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSV-TAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-HHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999987332211 122212122468899999999999888876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~  181 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITG  181 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhh
Confidence            4799999998542              24578889988888874    455 579999998654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.79  E-value=1.5e-18  Score=116.23  Aligned_cols=114  Identities=10%  Similarity=0.090  Sum_probs=86.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++...++..    .. ...++.++.+|++|++++.++++       +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPA----AE-LGAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH----HH-hCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999874332211    11 13468899999999999999887       6


Q ss_pred             cCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC---------CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG---------NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...                  .++.|+.++.++++++.+.-         ...++|++||...+
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            999999998541                  13568889999999887641         14689999987543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.79  E-value=1.9e-18  Score=117.11  Aligned_cols=117  Identities=16%  Similarity=0.193  Sum_probs=89.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+... +.... ...++.++++|++|+++++++++       
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-DEIAG-VGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999999999999999999999863322111 11111 23578899999999999999887       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||....              ++.|+.++.++++++.+.    +...++|++||...
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~  172 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG  172 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHh
Confidence            68999999985421              356888888888887653    21268999987654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.79  E-value=2.2e-18  Score=116.52  Aligned_cols=118  Identities=12%  Similarity=0.136  Sum_probs=88.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.... ...++.++.+|++|++++.+++++     
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-EHLQKT-YGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHH-HHHHHH-HCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHh-cCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3467899999999999999999999999999999987432211 111111 245688999999999999988865     


Q ss_pred             --cCEEEEeCccccc----------------eecchHH----HHHHHHHHHHhCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVHF----------------RSHNILM----QLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~~----------------~~~~~~~----~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                        +|+||||||....                ++.|+.+    +..+++.+.+.+ ..++|++||...+
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~  176 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGK  176 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTS
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhc
Confidence              8999999985321                2356677    456666666666 6899999987644

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.79  E-value=3e-18  Score=116.11  Aligned_cols=119  Identities=14%  Similarity=0.131  Sum_probs=90.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC--------chHHHHHhhhh--ccCCeEEEEcccCChHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL--------DIDKLQMLLSF--KKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~--------~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~   71 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...        .....+.....  ...++.++.+|++|++++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            467899999999999999999999999999999974321        11111111111  24578899999999999999


Q ss_pred             Hhc-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           72 AVK-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        72 ~~~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      +++       ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  162 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc
Confidence            886       5899999998542              235788899888888643    44 5799999987654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.79  E-value=3e-18  Score=114.42  Aligned_cols=107  Identities=13%  Similarity=0.053  Sum_probs=86.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++..            ...++..+.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------------EQYPFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------------SCCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------------hcCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999999998721            11237889999999999999886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++    .+.+ ..++|++||...+
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  137 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH  137 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC
Confidence            5899999998532              2356788888888887    3455 5799999987644

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.79  E-value=2.4e-18  Score=116.69  Aligned_cols=114  Identities=13%  Similarity=0.073  Sum_probs=89.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++    +...+.... ...++.++.+|++|+++++++++       
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG----DAADAAATK-IGCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHH-HCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHH-cCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986    222222222 24578899999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~  166 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQ  166 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc
Confidence            5899999998642              235688888888888765    34 4689999986644

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=3.6e-18  Score=115.31  Aligned_cols=116  Identities=11%  Similarity=0.027  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++.++++    
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH----GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHH----HHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999862    211111112  13468899999999999988876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         ++|+||||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  171 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH  171 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc
Confidence               5899999998542              234677887777666643    45 5799999987654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.79  E-value=2e-18  Score=117.39  Aligned_cols=114  Identities=18%  Similarity=0.140  Sum_probs=89.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++||||+|+||+++++.|+++|++|++++|+.    ....+....+.  ..++.++++|++|+++++++++      
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR----TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999986    22222222222  3468899999999999998886      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...               .++.|+.++.++++++    .+.+ ..++|++||...+
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~  169 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGT  169 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhc
Confidence             5899999998532               1457888888888887    4455 5799999986543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.78  E-value=3.1e-18  Score=114.16  Aligned_cols=114  Identities=16%  Similarity=0.090  Sum_probs=85.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+++    ...+..+.+ ..++ .++.+|++|++++.++++      
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAA----ALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            3578999999999999999999999999999999862    111112222 2345 889999999999988874      


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|+||||||...              .++.|+.++.++.+++    .+.+ ..++|++||...+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  148 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGT  148 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhc
Confidence            6899999998542              1346777866666655    4455 6899999986543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.78  E-value=1.1e-18  Score=119.08  Aligned_cols=121  Identities=16%  Similarity=0.136  Sum_probs=91.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|+..................++.++.+|++|+++++++++       
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999988742111111111111124578899999999999988876       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCcccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~~  122 (124)
                      ++|++|||||...               .++.|+.++.++++++.+... -.++|++||...+.
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~  191 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ  191 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc
Confidence            5899999998532               235789999999999987641 13999999876543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.78  E-value=1.8e-18  Score=115.90  Aligned_cols=116  Identities=13%  Similarity=0.099  Sum_probs=87.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--c-------CCeEEEEcccCChHHHHH
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--K-------QGAHLIEASFADHRSLVE   71 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~-------~~~~~~~~D~~~~~~~~~   71 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++.    ...+....+.  .       .++.++.+|++|++++.+
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA----AAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            34678999999999999999999999999999999862    2111111111  1       468899999999999998


Q ss_pred             Hhcc-------c-CEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           72 AVKR-------V-DVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        72 ~~~~-------~-d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                      ++++       + |+||||||...              .++.|+.++.++++++.+.    +...++|++||...
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  155 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVG  155 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhh
Confidence            8875       3 99999998542              1356888999998888764    21258999998743

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.78  E-value=3.7e-18  Score=115.63  Aligned_cols=117  Identities=10%  Similarity=0.093  Sum_probs=91.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+....+ ... ...++.++.+|++|++++.++++      +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQR-IIA-SGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHH-HHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-HHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            468899999999999999999999999999999987544322222 211 24578899999999999988876      5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~  172 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQL  172 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC
Confidence            899999998531              245788888888888743    44 5799999987644

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.78  E-value=3.5e-18  Score=115.04  Aligned_cols=107  Identities=14%  Similarity=0.100  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++..             ..++.++.+|++|+++++++++      
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            346789999999999999999999999999999998721             3467899999999999998886      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+.    + ..++|++||...+
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  137 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQAS  137 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhc
Confidence             5899999998542              1356888888888888653    3 4799999987654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.78  E-value=4.7e-18  Score=114.83  Aligned_cols=115  Identities=15%  Similarity=0.149  Sum_probs=88.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHh------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAV------   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~------   73 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++++++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK----ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    211111222  2346889999999999998887      


Q ss_pred             --cccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           74 --KRVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        74 --~~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        .++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  162 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF  162 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhc
Confidence              35899999998542              13467888888888874    345 5799999987654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.78  E-value=2.7e-19  Score=121.12  Aligned_cols=93  Identities=14%  Similarity=0.206  Sum_probs=82.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+++||||+|++|+++++.|+++|++|++++|.                       ++|++|++++.++++  ++|+|||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999999999993                       279999999999998  6999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          ..+.|+.++.++++++.+.+ + ++|++||...|
T Consensus        63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy  110 (287)
T 3sc6_A           63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVF  110 (287)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred             CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhc
Confidence            998653          24578899999999999998 5 79999987655

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.78  E-value=2.7e-18  Score=116.47  Aligned_cols=117  Identities=15%  Similarity=0.079  Sum_probs=90.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++....+...+.+.. ...++.++.+|++|++++.++++       
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-hCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999999999999999999999862111111111111 23468899999999999888775       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.+.  + ..++|++||...
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhh
Confidence            5899999998542              1457899999999999886  4 479999998654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.78  E-value=4.2e-18  Score=115.80  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=91.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCch------HHHHHhhhhccCCeEEEEcccCChHHHHHHhc-
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDI------DKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+....+.      +..+.... ...++.++.+|++|+++++++++ 
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999753221      11111211 24568899999999999998886 


Q ss_pred             ------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236           75 ------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~  120 (124)
                            ++|++|||||...              .++.|+.++.++++++.+.-   ...++|++||...
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  155 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh
Confidence                  5899999998542              23578999999999887652   1469999998653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.78  E-value=2e-18  Score=117.71  Aligned_cols=119  Identities=14%  Similarity=0.173  Sum_probs=91.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.........+.. .....++.++.+|++|+++++++++       
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV-EKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-HTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999998722111111111 1124578899999999999988876       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...               .++.|+.++.++++++.+.- ...++|++||...+
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  187 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAY  187 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhc
Confidence            5899999998531               23578899999999998753 13589999987544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.78  E-value=1.3e-18  Score=117.03  Aligned_cols=116  Identities=17%  Similarity=0.155  Sum_probs=88.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..    ...+....+  ...++.++.+|++|+++++++++     
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVE----RLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    222222222  24578899999999999998886     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...               .++.|+.++.++++++.+..  ...++|++||...+
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  151 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVR  151 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGG
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhc
Confidence              5899999997531               13568888888888876532  01599999987644

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.78  E-value=3.8e-18  Score=114.85  Aligned_cols=116  Identities=14%  Similarity=0.129  Sum_probs=90.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++    +...+..+.+ ..++.++.+|++|++++++++++     
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE----RLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999986    2222222222 25688999999999999988764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++.++++++.+.. ...++|++||...+
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  141 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL  141 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence              799999998532              23578899999999988752 12589999987643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.78  E-value=2.8e-19  Score=127.34  Aligned_cols=115  Identities=17%  Similarity=0.232  Sum_probs=87.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH-H-HHHh--------hhhccCCeEEEEcccCChHHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID-K-LQML--------LSFKKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~-~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      +|+++||||+|+||+++++.|++.|++|++++|++...+.. . .+.+        ......+++++.+|++|++.+. .
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  147 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  147 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence            56899999999999999999999999999999997421110 0 0111        1112468999999999988888 7


Q ss_pred             hcccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           73 VKRVDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        73 ~~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +.++|+|||+|+...       ..+.|+.++.++++++.+ + ++++|++||...
T Consensus       148 ~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~  200 (427)
T 4f6c_A          148 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV  200 (427)
T ss_dssp             SSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG
T ss_pred             cCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh
Confidence            788999999998653       245789999999999998 6 789999997654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.78  E-value=3.5e-18  Score=112.79  Aligned_cols=112  Identities=16%  Similarity=0.138  Sum_probs=84.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++     ...+..... -.++.++.+|++|++++.++++       +
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDE-----KRLQALAAE-LEGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHH-STTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHH-hhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999986     222211111 1268899999999999988876       5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      +|++||+||...              .++.|+.++.++++.+    .+.+ ..++|++||...+
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~  141 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGK  141 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhc
Confidence            899999998532              1345777776555544    4455 6899999987654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.78  E-value=6.6e-19  Score=119.45  Aligned_cols=94  Identities=18%  Similarity=0.180  Sum_probs=82.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   80 (124)
                      .++++||||+|++|+++++.|+++|++|++++|+                       .+|++|++++.++++  ++|+||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            4689999999999999999999999999999885                       279999999999998  799999


Q ss_pred             EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~  117 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVF  117 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeE
Confidence            9998643          24578899999999999998 6 99999987554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.78  E-value=4.4e-18  Score=113.37  Aligned_cols=110  Identities=19%  Similarity=0.180  Sum_probs=86.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++     ...+....  ..++.++.+|++|++++++++++      
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE-----GPLREAAE--AVGAHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH--TTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH--HcCCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999999986     22221111  11378899999999999988764      


Q ss_pred             -cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           76 -VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                       +|++|||||...              .++.|+.++.++++++.+.    + ..++|++||..
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~  138 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV  138 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch
Confidence             899999998532              1356888888888887653    4 57999999865

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.78  E-value=1.5e-18  Score=116.56  Aligned_cols=115  Identities=12%  Similarity=0.035  Sum_probs=89.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|+..    ...+....+  ...++.++.+|++|++++.++++.    
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVE----KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999862    222222222  235688999999999999988764    


Q ss_pred             ---cCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         +|++|||||...               .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  170 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGK  170 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSS
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhc
Confidence               899999998621               235678888888888754    44 5799999987654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.78  E-value=2.2e-18  Score=116.07  Aligned_cols=119  Identities=20%  Similarity=0.181  Sum_probs=89.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+++..+.. .+.+......++.++++|++|+++++++++       
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAA-RRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986222111 111111124578999999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL  162 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc
Confidence            5899999998542              2356888888888887653    212589999987654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.78  E-value=1.6e-18  Score=116.75  Aligned_cols=118  Identities=14%  Similarity=0.216  Sum_probs=88.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~v   79 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|+++..++...+.........+..+.+|++++++++++++   ++|++
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   89 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDIL   89 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            578999999999999999999999999999999862221111111111113457889999999999998887   58999


Q ss_pred             EEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           80 ICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      |||||...              .++.|+.++.++.+++.+    .+ ..++|++||...+
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  148 (267)
T 3t4x_A           90 INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAI  148 (267)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGT
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhc
Confidence            99998542              145678887777666644    45 5799999987654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=1.5e-18  Score=115.96  Aligned_cols=118  Identities=14%  Similarity=0.166  Sum_probs=86.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-cc-CCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KK-QGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++...+... +..... .. .++.++.+|++|++++.++++     
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999872221111 111111 12 568899999999999988876     


Q ss_pred             --ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH-------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...             .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  149 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAK  149 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC----
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhc
Confidence              4899999998532             235678888888888743    44 5799999986644

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.78  E-value=3e-18  Score=115.72  Aligned_cols=120  Identities=17%  Similarity=0.122  Sum_probs=88.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeC-CCCCCchHHHHHhhhhccCCeEEEEcccCCh----HHHHHHhc-
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQR-PDIGLDIDKLQMLLSFKKQGAHLIEASFADH----RSLVEAVK-   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~-   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++| ++...+ ...+.+......++.++.+|++|+    +++.++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ-RLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            34678999999999999999999999999999999 541111 111111111135688999999999    98888876 


Q ss_pred             ------ccCEEEEeCcccc-------------------------ceecchHHHHHHHHHHHHhC--Cc------cEEEEe
Q 033236           75 ------RVDVVICTISGVH-------------------------FRSHNILMQLKLVDAIREAG--NV------KKRKLN  115 (124)
Q Consensus        75 ------~~d~vi~~a~~~~-------------------------~~~~~~~~~~~~~~~~~~~~--~~------~~~i~~  115 (124)
                            ++|++|||||...                         .++.|+.++.++++++.+.-  ..      .++|++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  5899999998431                         13467888899999998742  13      689999


Q ss_pred             cCCccc
Q 033236          116 EGMIPF  121 (124)
Q Consensus       116 ss~~~~  121 (124)
                      ||...+
T Consensus       168 sS~~~~  173 (276)
T 1mxh_A          168 CDAMTD  173 (276)
T ss_dssp             CCGGGG
T ss_pred             Cchhhc
Confidence            987654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.78  E-value=2e-18  Score=128.89  Aligned_cols=111  Identities=18%  Similarity=0.282  Sum_probs=91.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH-HHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS-LVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~v   79 (124)
                      ++|+++||||+|++|+++++.|+++ |++|++++|++....     ..  ....+++++.+|++|+++ +.++++++|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~-----~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-----RF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTG-----GG--TTCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhh-----hh--ccCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            4678999999999999999999998 899999999873221     11  124578999999999765 88889999999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.+  +++|++||...|
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vy  436 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVY  436 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGG
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHc
Confidence            99998543          23568899999999999887  799999987655

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.78  E-value=1.8e-18  Score=116.46  Aligned_cols=119  Identities=13%  Similarity=0.066  Sum_probs=89.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|++...+... +.+.. ....++.++.+|++|++++.++++      
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-SALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999862221111 11111 223358899999999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+.-   ...++|++||...+
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS  150 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC
Confidence             4899999998542              24578899999988886531   14689999876543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.78  E-value=6.8e-18  Score=112.28  Aligned_cols=115  Identities=15%  Similarity=0.074  Sum_probs=86.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |+|+++||||+|+||++++++|+++|++|++++|++.    ...+....+   ...++.++.+|++|++++.++++    
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAE----TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME   76 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999862    211111111   13468899999999999999887    


Q ss_pred             ---ccCEEEEeCcccc-----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH-----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|+||||||...                 .++.|+.++.++.+.+.    +.+ ..++|++||...+
T Consensus        77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~  146 (250)
T 2cfc_A           77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASL  146 (250)
T ss_dssp             HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc
Confidence               6899999998532                 12456777766655554    456 6899999986544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=4.1e-18  Score=115.17  Aligned_cols=113  Identities=11%  Similarity=0.097  Sum_probs=86.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-----ccCCeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-----KKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+     ...++.++.+|++|++++.++++  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE----RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    111111111     12458899999999999999887  


Q ss_pred             -----ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 -----RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -----~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                           ++|++|||||...                  .++.|+.++.++++++.+.    +  .++|++||...
T Consensus        81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~  151 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIAS  151 (278)
T ss_dssp             HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTS
T ss_pred             HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccc
Confidence                 6999999998532                  1346788888888887664    4  69999998764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.78  E-value=4.7e-18  Score=113.89  Aligned_cols=117  Identities=20%  Similarity=0.216  Sum_probs=88.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...  ...+....+  ...++.++.+|++|+++++++++     
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEE--QAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHH--HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999986220  011111122  13468899999999999998876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCc-cEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNV-KKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~-~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+    .+ . .++|++||...+
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~  145 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAI  145 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhc
Confidence              6899999998542              135678888888888765    35 4 799999987543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.78  E-value=2.5e-18  Score=115.27  Aligned_cols=115  Identities=17%  Similarity=0.134  Sum_probs=89.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..    ...+....+  ...++.++.+|++|+++++++++     
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSE----GAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    211212222  24578899999999999998876     


Q ss_pred             --ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH-------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...             .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  151 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGE  151 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHc
Confidence              5899999998542             235688888888888753    34 4699999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.78  E-value=3.8e-18  Score=115.02  Aligned_cols=114  Identities=11%  Similarity=0.069  Sum_probs=88.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+   ...++.++.+|++|+++++++++   
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE----EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999862    111111111   13568889999999999998876   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                          ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||..
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~  160 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLT  160 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGG
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcc
Confidence                5899999998542              134678888888887754    34 57999999765

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.78  E-value=7.3e-18  Score=113.15  Aligned_cols=117  Identities=15%  Similarity=0.126  Sum_probs=90.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++++++||||+|+||+++++.|+++|   ++|++++|++...+.  .+.... ...++.++.+|++|+++++++++    
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~--~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--LEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--HHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH--HHHhhc-cCCceEEEEecCCChHHHHHHHHHHHH
Confidence            46789999999999999999999999   999999998754321  121211 14578999999999999999887    


Q ss_pred             -----ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----------CC----ccEEEEecCCcc
Q 033236           75 -----RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----------GN----VKKRKLNEGMIP  120 (124)
Q Consensus        75 -----~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----------~~----~~~~i~~ss~~~  120 (124)
                           ++|+||||||...               .++.|+.++.++++++.+.          +.    ..++|++||...
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence                 6999999998543               1356788888888888654          10    258999998765


Q ss_pred             c
Q 033236          121 F  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus       177 ~  177 (267)
T 1sny_A          177 S  177 (267)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.78  E-value=2.7e-18  Score=116.12  Aligned_cols=115  Identities=16%  Similarity=0.087  Sum_probs=88.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.    +...+....+ ..++.++.+|++|+++++++++       
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL----DALQETAAEI-GDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHH-TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999986    2222222222 3578899999999999999887       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-----CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-----NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...               .++.|+.++.++++++.+..     ...++|++||...+
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  168 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT  168 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc
Confidence            6999999998532               13567888888888776532     02589999987654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.78  E-value=4.4e-18  Score=114.41  Aligned_cols=112  Identities=14%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..   ...++.++.+|++|++++.++++       
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH----ASVTEL---RQAGAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC----HHHHHH---HHHTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH----HHHHHH---HhcCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999873    222222   22347899999999999998886       


Q ss_pred             ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH-------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...             .++.|+.++.++++++.+.    + ..++|++||...+
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  161 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTR  161 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhc
Confidence            4899999998542             2456888888888887653    3 4689999987654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.78  E-value=2.5e-18  Score=115.66  Aligned_cols=116  Identities=14%  Similarity=0.064  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH-HHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL-QMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++|+++||||+|+||++++++|+++|++|++++|+.    .... +....+  ...++.++.+|++|++++.++++    
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999943    1211 111111  23568899999999999999887    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                         ++|+||||||...              .++.|+.++.++++++.+.-. -.++|++||...+
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~  160 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV  160 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhc
Confidence               6899999998532              245688999999999887620 1589999987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.78  E-value=2e-18  Score=116.52  Aligned_cols=117  Identities=15%  Similarity=0.111  Sum_probs=88.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|+..+......+.... ...++.++.+|++|+++++++++       
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-AGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999988652111111111111 24578899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~  168 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVG  168 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhh
Confidence            5899999998542              235688888888888744    44 469999998653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.77  E-value=2.7e-18  Score=114.53  Aligned_cols=117  Identities=16%  Similarity=0.177  Sum_probs=87.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC-CCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP-DIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+ +...+ ...+.+.. ...++.++.+|++|+++++++++      
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID-ETIASMRA-DGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999998 42221 11121211 23468899999999999999887      


Q ss_pred             -ccCEEEEeCcc-cc--------------ceecchHHHHHHHHHHHHh----C----CccEEEEecCCcc
Q 033236           75 -RVDVVICTISG-VH--------------FRSHNILMQLKLVDAIREA----G----NVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~-~~--------------~~~~~~~~~~~~~~~~~~~----~----~~~~~i~~ss~~~  120 (124)
                       ++|+||||||. ..              .++.|+.++.++++++.+.    +    ...+++++||...
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  153 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG  153 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh
Confidence             79999999985 21              1356788888888776532    1    1168999987654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.77  E-value=6e-18  Score=113.26  Aligned_cols=116  Identities=18%  Similarity=0.125  Sum_probs=86.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++.++++     
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDA----TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT   76 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999862    111111121  13468899999999999999887     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  143 (256)
T 1geg_A           77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH  143 (256)
T ss_dssp             TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence              6999999998532              1346778887777777553    213689999876543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.77  E-value=2.2e-18  Score=118.00  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=89.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|++++.++++      
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP----ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999872    222222222  24568899999999999998876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+    .+...+++++||...+
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  172 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL  172 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence             5899999998542              245788899888888754    2213589999987654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.77  E-value=1.2e-18  Score=117.73  Aligned_cols=115  Identities=15%  Similarity=0.169  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+  ...++.++.+|++|++++.++++     
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPS----RVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHH----HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    222222222  24568899999999999999887     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~  166 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSE  166 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhC
Confidence              5899999998542              245688888888777655    34 4699999986543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.77  E-value=2e-18  Score=117.83  Aligned_cols=117  Identities=11%  Similarity=0.058  Sum_probs=88.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~-------   74 (124)
                      +++++||||+|+||+++++.|+++|++|++++|+....+. ..+.+......++.++.+|++|+ ++++++++       
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHE-AVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999998722111 11222222235789999999998 88777765       


Q ss_pred             ccCEEEEeCcccc--------------------------------------------ceecchHHHHHHHHHHHH----h
Q 033236           75 RVDVVICTISGVH--------------------------------------------FRSHNILMQLKLVDAIRE----A  106 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~----~  106 (124)
                      ++|++|||||...                                            .++.|+.++.++++++.+    .
T Consensus        91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~  170 (311)
T 3o26_A           91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS  170 (311)
T ss_dssp             SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence            6999999999642                                            146788998888888764    2


Q ss_pred             CCccEEEEecCCccc
Q 033236          107 GNVKKRKLNEGMIPF  121 (124)
Q Consensus       107 ~~~~~~i~~ss~~~~  121 (124)
                      + ..++|++||...+
T Consensus       171 ~-~~~IV~isS~~~~  184 (311)
T 3o26_A          171 D-SPRIVNVSSSTGS  184 (311)
T ss_dssp             S-SCEEEEECCGGGS
T ss_pred             C-CCeEEEEecCCcc
Confidence            3 4699999987644

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.77  E-value=3.1e-18  Score=114.40  Aligned_cols=118  Identities=15%  Similarity=0.084  Sum_probs=89.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCCh-HHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADH-RSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~---   74 (124)
                      |++|+++||||+|+||+++++.|+++|++ |++++|++..   ...+.+... ...++.++.+|++|+ +++.++++   
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP---TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH---HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH---HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            35788999999999999999999999996 8999998631   222222221 234688999999998 88888776   


Q ss_pred             ----ccCEEEEeCcccc------ceecchHHHHHHHHHHHHhCC------ccEEEEecCCccc
Q 033236           75 ----RVDVVICTISGVH------FRSHNILMQLKLVDAIREAGN------VKKRKLNEGMIPF  121 (124)
Q Consensus        75 ----~~d~vi~~a~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~i~~ss~~~~  121 (124)
                          ++|++|||||...      .++.|+.++.++++++.+...      ..++|++||...+
T Consensus        80 ~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~  142 (254)
T 1sby_A           80 DQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             HhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc
Confidence                6899999998542      356789999999998875420      2579999987654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.77  E-value=4.1e-18  Score=114.47  Aligned_cols=114  Identities=13%  Similarity=0.123  Sum_probs=87.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+.  ..++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE----ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    2111112221  3468899999999999888876     


Q ss_pred             --ccCEEEEeCccc-c--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGV-H--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~-~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||.. .              .++.|+.++.++++++.+.    + ..++|++||...
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~  147 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAG  147 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhh
Confidence              589999999854 1              1346788888888877653    4 479999998643

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.77  E-value=4.2e-18  Score=115.18  Aligned_cols=120  Identities=15%  Similarity=0.096  Sum_probs=89.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-------chHHH-HHhhhh--ccCCeEEEEcccCChHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-------DIDKL-QMLLSF--KKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~   71 (124)
                      .+|+++||||+|+||+++++.|+++|++|++++|+....       ..... +.....  ...++.++.+|++|++++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            468899999999999999999999999999999873210       01111 111111  24578999999999999999


Q ss_pred             Hhc-------ccCEEEEeCcccc----------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           72 AVK-------RVDVVICTISGVH----------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        72 ~~~-------~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      +++       ++|++|||||...          .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            887       5899999998542          2467888998888887553    213589999986543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.77  E-value=5.5e-18  Score=114.56  Aligned_cols=117  Identities=14%  Similarity=0.103  Sum_probs=88.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+++.....+...+.+.. ...++.++.+|++|+++++++++       
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-AGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999977652111111121211 24568899999999999998887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                      ++|++|||||...              .++.|+.++.++++++.+.- ...++|++||..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            6899999998542              23568899999999998762 136899998754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.77  E-value=1.9e-19  Score=123.23  Aligned_cols=106  Identities=24%  Similarity=0.298  Sum_probs=81.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+++||||+|++|+++++.|+++|++|++++|+++.... ....... ....+++++.+|++          ++|+|||
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMI-PPEGTGKFLEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSS-CCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccc-chhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence            6899999999999999999999999999999998741100 0011111 12345667777765          7999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++ |+.++.++++++.+.+ ++++|++||...|
T Consensus        76 ~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~  123 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVY  123 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGG
T ss_pred             CCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHh
Confidence            998542          234 8999999999999999 8999999987655

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.77  E-value=4.8e-18  Score=115.06  Aligned_cols=115  Identities=13%  Similarity=0.171  Sum_probs=87.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+. ..++.++.+|++|+++++++++      
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE----ACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999862    2112222222 1268889999999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCc----cEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNV----KKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~----~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+    .+ .    .++|++||...+
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~  172 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGI  172 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHc
Confidence             5899999998432              235678888777776653    44 3    799999987644

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.77  E-value=3.9e-18  Score=115.08  Aligned_cols=117  Identities=15%  Similarity=0.037  Sum_probs=89.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+++.....+...+.... ...++.++.+|++|++++.++++       
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-LGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999887652111111111111 24568899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~  119 (124)
                      ++|++|||||...              .++.|+.++.++++++.+... -.++|++||..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            5899999998542              145789999999999988641 23899999765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.77  E-value=3e-18  Score=116.96  Aligned_cols=119  Identities=13%  Similarity=0.091  Sum_probs=88.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.+......++.++.+|++|++++.+++++     
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKAT-AEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999986211111 1111111145689999999999999988764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                        +|+||||||...              .++.|+.++.++++++.+.    ....++|++||...
T Consensus       103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~  167 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA  167 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc
Confidence              599999998431              2356788888888877543    11469999998754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.77  E-value=3.8e-18  Score=115.78  Aligned_cols=118  Identities=18%  Similarity=0.138  Sum_probs=85.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+......+.... ...++.++++|++|+++++++++       +
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-LGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999997542111111111111 24578899999999999998887       6


Q ss_pred             cCEEEEeCccc----------------cceecchHHHHHHHHHHHHhC------CccEEEEecCCccc
Q 033236           76 VDVVICTISGV----------------HFRSHNILMQLKLVDAIREAG------NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~----------------~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~~~  121 (124)
                      +|++|||||..                ..++.|+.++.++++++.+..      ...++|++||...+
T Consensus       108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A          108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            89999999862                124578899988888876541      02489999987644

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.77  E-value=3.7e-18  Score=113.62  Aligned_cols=116  Identities=12%  Similarity=0.061  Sum_probs=87.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++    ....+...... ..++.++.+|++|++++.++++.    
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS----DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999986    22112222222 25688999999999999988864    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCc-cEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNV-KKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~-~~~i~~ss~~~~  121 (124)
                         +|+||||||...              .++.|+.++.++.+.+.    +.+ . .++|++||...+
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~  146 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGF  146 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhc
Confidence               899999998532              23457776666666554    344 4 799999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.77  E-value=4.1e-18  Score=115.38  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....... .+.+......++.++.+|++|+++++++++       
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTA-ARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-HHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999999986221111 111111124578999999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++.+++.+    .+ ..++|++||...
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~  167 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLG  167 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHH
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhh
Confidence            5899999998432              245788999999888854    33 368999998754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.77  E-value=3.6e-18  Score=118.31  Aligned_cols=110  Identities=17%  Similarity=0.290  Sum_probs=86.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++|+++||||+|++|+++++.|+++|++|++++|++.....    ....+ ...+++++.+|+.++.     +.++|+|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~v   95 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR----NVEHWIGHENFELINHDVVEPL-----YIEVDQI   95 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----GTGGGTTCTTEEEEECCTTSCC-----CCCCSEE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh----hhhhhccCCceEEEeCccCChh-----hcCCCEE
Confidence            346889999999999999999999999999999997633211    11122 2357899999998763     5789999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ||+|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~  145 (343)
T 2b69_A           96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVY  145 (343)
T ss_dssp             EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGG
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHh
Confidence            99998643          23578999999999999998 5 89999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.77  E-value=1.4e-17  Score=112.68  Aligned_cols=120  Identities=10%  Similarity=0.071  Sum_probs=91.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH---HHHHhhh--hccCCeEEEEcccCChHHHHHHhc-
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID---KLQMLLS--FKKQGAHLIEASFADHRSLVEAVK-   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~-   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|+....+..   ..+....  ....++.++.+|++|++++.++++ 
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999987432110   1111111  124568899999999999998876 


Q ss_pred             ------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 ------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                            ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  153 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCC
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhc
Confidence                  5899999998542              235788999888888865    33 4699999986543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=4.8e-19  Score=120.41  Aligned_cols=96  Identities=17%  Similarity=0.205  Sum_probs=83.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++||||+|++|+++++.|+ +|++|++++|++                   +.+.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence            479999999999999999999 899999999976                   1357899999999999987  999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy  108 (299)
T 1n2s_A           61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVF  108 (299)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGS
T ss_pred             CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEE
Confidence            998543          23568899999999999888 5 89999987654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=8.2e-18  Score=112.01  Aligned_cols=113  Identities=14%  Similarity=0.125  Sum_probs=87.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   77 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++     ...+....  ..++.++.+|++|+++++++.+   ++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id   76 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE-----SKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLD   76 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHh--ccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            3468899999999999999999999999999999986     22222211  2368899999999999987754   689


Q ss_pred             EEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           78 VVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|||||....              ++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  137 (246)
T 2ag5_A           77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS  137 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhC
Confidence            99999985421              34678888888887753    45 5799999986543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=6e-18  Score=115.56  Aligned_cols=117  Identities=17%  Similarity=0.154  Sum_probs=88.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh----hccCCeEEEEcccCChHHHHHHhcc-
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS----FKKQGAHLIEASFADHRSLVEAVKR-   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~-   75 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++...+... +.+..    ....++.++.+|++|++++.++++. 
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999862211111 11111    0234688999999999999998864 


Q ss_pred             ------cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236           76 ------VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI  119 (124)
Q Consensus        76 ------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~  119 (124)
                            +|+||||||...              .++.|+.++.++++++.+.    + ..++|++||..
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~  161 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT  161 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec
Confidence                  899999998431              2457889999999997662    2 36899998765

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.77  E-value=4e-18  Score=114.28  Aligned_cols=114  Identities=14%  Similarity=0.110  Sum_probs=89.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++     ...+........++.++.+|++|+++++++++       +
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE-----SNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999986     22222222124578899999999999988775       5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++++++.+.- ...++|++||...+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~  143 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE  143 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence            899999998542              24578899999999998752 12589999987654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.77  E-value=7.3e-18  Score=112.58  Aligned_cols=112  Identities=14%  Similarity=0.111  Sum_probs=86.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++    +...+..+.+ ..++.++.+|++|+++++++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999999986    2211212222 2468899999999999999876       58


Q ss_pred             CEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           77 DVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      |++|||||...               .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  138 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS  138 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhc
Confidence            99999998531               13567888888887776    345 5799999987643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.77  E-value=3.2e-18  Score=114.65  Aligned_cols=112  Identities=16%  Similarity=0.175  Sum_probs=87.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.    +...+.    ...++.++++|++|+++++++++      +
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG----EDVVAD----LGDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC----HHHHHH----TCTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch----HHHHHh----cCCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999965    222221    24578999999999999999887      7


Q ss_pred             cCEEEEeCccc------------------cceecchHHHHHHHHHHHHhC-----------CccEEEEecCCccc
Q 033236           76 VDVVICTISGV------------------HFRSHNILMQLKLVDAIREAG-----------NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~~ss~~~~  121 (124)
                      +|++|||||..                  ..++.|+.++.++++++.+.-           ...++|++||...+
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            99999999843                  124578899999998887642           13489999987654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.77  E-value=5.4e-18  Score=113.59  Aligned_cols=115  Identities=12%  Similarity=0.055  Sum_probs=88.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||++++++|+++|++|++++|++     ...+.........+.++.+|++|+++++++++       
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK-----AGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999986     22222222224578999999999999998886       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-------CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-------NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...               .++.|+.++.++++++.+..       ...+++++||...+
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~  151 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG  151 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc
Confidence            5899999998542               13467888888888775542       02369999977644

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.77  E-value=7.2e-18  Score=112.30  Aligned_cols=114  Identities=13%  Similarity=0.174  Sum_probs=88.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|+.     ...+........++.++.+|+++++++.++++   ++|+
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE-----EKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            367899999999999999999999999999999986     22222222223578899999999999999987   5899


Q ss_pred             EEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           79 VICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      +|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  147 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGI  147 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC-
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhc
Confidence            999998542              235678888888777754    44 4699999987654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=6.7e-18  Score=114.41  Aligned_cols=116  Identities=9%  Similarity=0.090  Sum_probs=87.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cC---CeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQ---GAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~---~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+.  ..   ++.++.+|++|+++++++++  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSE----RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    1111111211  12   68899999999999988876  


Q ss_pred             -----ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC--ccEEEEecCCccc
Q 033236           75 -----RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN--VKKRKLNEGMIPF  121 (124)
Q Consensus        75 -----~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ss~~~~  121 (124)
                           ++|++|||||...                  .++.|+.++.++++++.+...  ..++|++||...+
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  152 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAG  152 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCcccc
Confidence                 5899999998532                  124578888888888865420  1689999986543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.77  E-value=7.3e-18  Score=112.93  Aligned_cols=107  Identities=21%  Similarity=0.252  Sum_probs=85.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...             ..+.++.+|++|+++++++++.     
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999999999999986221             1267899999999999888764     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  150 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGL  150 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC
Confidence              799999998532              134678888888887654    35 5799999987643

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.77  E-value=6e-18  Score=112.25  Aligned_cols=115  Identities=15%  Similarity=0.088  Sum_probs=88.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      ++|+++||||+|+||+++++.|+++|+       +|++++|++.    ...+....+  ...++.++.+|++|++++.++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA----DLEKISLECRAEGALTDTITADISDMADVRRL   76 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH----HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH----HHHHHHHHHHccCCeeeEEEecCCCHHHHHHH
Confidence            357899999999999999999999998       9999999861    211111122  134688999999999999988


Q ss_pred             hc-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           73 VK-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        73 ~~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++       ++|+||||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  149 (244)
T 2bd0_A           77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT  149 (244)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhc
Confidence            86       5999999998542              135678888888888754    45 5799999987654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.77  E-value=5.6e-18  Score=115.03  Aligned_cols=115  Identities=13%  Similarity=0.115  Sum_probs=87.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++++++||||+|+||+++++.|+++|++|++++|++.    ...+..+.+.  ..++.++.+|++|+++++++++    
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK----SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH----HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999888752    1111122221  3468899999999999998875    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                         ++|+||||||...              .++.|+.++.++++++.    +.+ ..++|++||...
T Consensus       118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~  183 (285)
T 2c07_A          118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVG  183 (285)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhh
Confidence               5899999998542              13567888777777665    455 579999998754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.77  E-value=5.1e-18  Score=111.95  Aligned_cols=113  Identities=13%  Similarity=0.208  Sum_probs=87.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc----CEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV----DVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----d~v   79 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++     ...+........++.++.+|++++++++++++.+    |++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSE-----SKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH-----HHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            6799999999999999999999999999999986     2222222222456889999999999999998864    899


Q ss_pred             EEeCcccc--------------ceecchHHHHHHHHHHHHhCC--ccEEEEecCCccc
Q 033236           80 ICTISGVH--------------FRSHNILMQLKLVDAIREAGN--VKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ss~~~~  121 (124)
                      |||||...              .++.|+.++.++++++.+...  ..++|++||...+
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~  134 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ  134 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC
Confidence            99998532              235788999999988876520  1389999887644

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.77  E-value=1.3e-17  Score=110.66  Aligned_cols=113  Identities=18%  Similarity=0.163  Sum_probs=86.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~v   79 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++    ....+....  ..+.+++.+|++|++++.++++   ++|+|
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ----ADLDSLVRE--CPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHH--cCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999986    111111111  1356788999999999999987   48999


Q ss_pred             EEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           80 ICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      |||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ  140 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc
Confidence            99998532              2356788888888877653    313689999987654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.77  E-value=2.3e-18  Score=115.59  Aligned_cols=116  Identities=13%  Similarity=0.102  Sum_probs=90.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      .+++++||||+|+||+++++.|++ .|++|++++|+++    ...+..+.+  ...++.++.+|++|++++.++++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT----RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHH----HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChH----HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999 9999999999862    211212222  13568899999999999999887    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                         ++|+||||||...              .++.|+.++.++++++.+... ..++|++||...+
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~  143 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  143 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence               6899999998531              145688999999999987631 2489999986544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.77  E-value=9.7e-18  Score=112.04  Aligned_cols=113  Identities=18%  Similarity=0.218  Sum_probs=86.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+|+++||||+++||+++++.|+++|++|.+.+|++     +....... +..++..+++|++|+++++++++       
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~-----~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE-----KRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999986     22222211 24568899999999999988875       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++..+.+++.+.   + -.++|.+||...+
T Consensus        75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~  137 (247)
T 3ged_A           75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAF  137 (247)
T ss_dssp             CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccc
Confidence            3899999998542              2457788887777776542   2 2689999987643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.77  E-value=1.5e-17  Score=112.49  Aligned_cols=114  Identities=19%  Similarity=0.223  Sum_probs=87.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++     ...+....+  ...++.++.+|++|++++.++.+     
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-----GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-----HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999764     111222222  23468899999999999888754     


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~  169 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSF  169 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhc
Confidence             5899999998542              24568888888888774    345 5799999987654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.77  E-value=3.6e-18  Score=114.63  Aligned_cols=114  Identities=15%  Similarity=0.179  Sum_probs=87.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++....+...+... ....++.++.+|++|++++.++++       +
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK-DVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG-GGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999998876221111111111 123568999999999999999887       6


Q ss_pred             cCEEEEeCccc----------------cceecchHHHHHHHHHH----HHhCCccEEEEecCC
Q 033236           76 VDVVICTISGV----------------HFRSHNILMQLKLVDAI----REAGNVKKRKLNEGM  118 (124)
Q Consensus        76 ~d~vi~~a~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~  118 (124)
                      +|++|||||..                ..++.|+.++.++++++    .+.+ ..++|++||.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~  147 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQ  147 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeec
Confidence            89999999931                11356888888888887    4555 5789998866

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.77  E-value=5.7e-18  Score=113.83  Aligned_cols=118  Identities=13%  Similarity=0.117  Sum_probs=89.4

Q ss_pred             CCceEEEEccCC-hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            2 GKSKVLVVGGTG-YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g-~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      ++++++||||+| +||+++++.|+++|++|++++|+....+. ..+.+......++.++.+|++|+++++++++      
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGE-TRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHH-HHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            467899999986 89999999999999999999998722111 1111212223578999999999999998876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh-----CCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA-----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+.     + ..++|++||...+
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~  165 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-GGVIVNNASVLGW  165 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-CEEEEEECCGGGT
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEeCCHHHc
Confidence             4799999998532              1356888888888888764     3 4689999886644

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.77  E-value=1.4e-17  Score=112.87  Aligned_cols=120  Identities=17%  Similarity=0.087  Sum_probs=88.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC--------chHHHHHh-hhh--ccCCeEEEEcccCChHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL--------DIDKLQML-LSF--KKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~--------~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~   70 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.+..        .....+.. ...  ...++.++.+|++|+++++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            467899999999999999999999999999999853110        11222211 111  2456889999999999999


Q ss_pred             HHhc-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           71 EAVK-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        71 ~~~~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++++       ++|++|||||...              .++.|+.++.++++++.+    .+...++|++||...+
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            9876       5899999998542              235688888888888754    3213689999987654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.76  E-value=1.3e-17  Score=112.86  Aligned_cols=113  Identities=12%  Similarity=0.054  Sum_probs=85.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcc-------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKR-------   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-------   75 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++    +...+....+.. .++.++.+|++|+++++++++.       
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRRE----ERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999986    221121222221 4688999999999999999875       


Q ss_pred             cCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCcc-EEEEecCCccc
Q 033236           76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVK-KRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~-~~i~~ss~~~~  121 (124)
                      +|++|||||...               .++.|+.++.++++++.    +.+ .. ++|++||...+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~  162 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGK  162 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGT
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhc
Confidence            599999998532               13457778777666664    455 46 99999987644

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.76  E-value=4.7e-18  Score=114.10  Aligned_cols=115  Identities=12%  Similarity=0.077  Sum_probs=87.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++. .|+.    ....+....+  ...++.++.+|++|+++++++++.   
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK----KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE   78 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999987 6665    1111212222  235688999999999999988864   


Q ss_pred             ----cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 ----VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ----~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                          +|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  145 (258)
T 3oid_A           79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSI  145 (258)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGT
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhC
Confidence                699999998431              245788888888888754    34 4699999987654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.76  E-value=7.2e-18  Score=112.75  Aligned_cols=118  Identities=14%  Similarity=0.119  Sum_probs=89.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc--CChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF--ADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.........+.++.+|+  +|+++++++++     
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQV-ASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999986221111 1111121234788999999  99998888876     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...               .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~  156 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGR  156 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGT
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhc
Confidence              5899999998531               245788888888888843    44 5799999987644

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.76  E-value=7.6e-18  Score=112.75  Aligned_cols=116  Identities=10%  Similarity=0.036  Sum_probs=86.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeC-CCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQR-PDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++++++||||+|+||++++++|+++|++|++++| ++    ....+..+.+  ...++.++.+|++|++++.++++    
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE----DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCCh----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999 43    1111111111  13467899999999999998887    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                         ++|+||||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~  149 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK  149 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc
Confidence               6899999998532              1346778888877777653    213699999986543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.76  E-value=4e-18  Score=113.39  Aligned_cols=115  Identities=12%  Similarity=0.089  Sum_probs=88.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|+++++++++.    
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQA----SAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999862    211211122  245688999999999999988763    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         +|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  145 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGS  145 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc
Confidence               799999998542              235678888888887754    34 4699999986543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.76  E-value=2.1e-18  Score=117.49  Aligned_cols=119  Identities=13%  Similarity=0.149  Sum_probs=89.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++|+++||||+|+||+++++.|+++|+   +|++.+|+....++............++.++.+|++|+++++++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999987   9999999862211111111111123568899999999999999886    


Q ss_pred             ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...               .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~  179 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGR  179 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhc
Confidence               4899999998532               13568888888888874    345 5799999987644

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.76  E-value=3.8e-18  Score=114.86  Aligned_cols=115  Identities=16%  Similarity=0.104  Sum_probs=86.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++..+....   ...+..+.+  ...++.++.+|++|++++.++++     
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAA---GAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999776654411   111112222  24578999999999999998886     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH-----HhCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR-----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...              .++.|+.++.++++.+.     +.+ ..++|++||...
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~  167 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSG  167 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHH
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHh
Confidence              5899999998542              23568888888888874     334 579999998654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.76  E-value=2.8e-18  Score=115.96  Aligned_cols=114  Identities=14%  Similarity=0.104  Sum_probs=88.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++..+.+|++|+++++++++     
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA----GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999862    211111111  23568899999999999998886     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~  167 (270)
T 3ftp_A          103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVG  167 (270)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhh
Confidence              5899999998542              245788899888888754    34 468999998653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.76  E-value=1.2e-17  Score=113.40  Aligned_cols=116  Identities=18%  Similarity=0.176  Sum_probs=89.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|+.     ...+........++.++.+|+++++++.++++      
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA-----ERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH-----HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3478899999999999999999999999999999986     22222222234678999999999999888876      


Q ss_pred             -ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...                   .++.|+.++.++++++.+..  ...++|++||...+
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGF  146 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhc
Confidence             4799999998531                   12468888888888886532  02589999877644

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=2.6e-18  Score=115.63  Aligned_cols=115  Identities=15%  Similarity=0.162  Sum_probs=83.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      +++++||||+|+||+++++.|+++|++|++++|++.    ...+....+    ...++.++.+|++|++++.++++.   
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE----AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   82 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999862    211111111    134588999999999999988764   


Q ss_pred             ----cCEEEEeCcccc------ceecchHHHHHHHHH----HHHhC--CccEEEEecCCccc
Q 033236           76 ----VDVVICTISGVH------FRSHNILMQLKLVDA----IREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ----~d~vi~~a~~~~------~~~~~~~~~~~~~~~----~~~~~--~~~~~i~~ss~~~~  121 (124)
                          +|++|||||...      .++.|+.++..+.+.    +.+.+  ...++|++||...+
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  144 (267)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc
Confidence                799999998542      245666655554444    43332  13689999987654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.76  E-value=6.1e-18  Score=113.54  Aligned_cols=118  Identities=10%  Similarity=0.041  Sum_probs=88.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++++.........+.... ...++.++.+|++|+++++++++       
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-LGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-TTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999855542211111122211 23568899999999999999886       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~  120 (124)
                      ++|++|||||...               .++.|+.++.++++++.+... ..++|++||...
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            5899999998441               145789999999999987641 138999997653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.76  E-value=1.3e-17  Score=110.12  Aligned_cols=116  Identities=16%  Similarity=0.100  Sum_probs=87.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|+....+... +........++.++.+|++|++++.++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIA-HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999862211111 11111224678899999999999999987       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~  119 (124)
                      ++|++|||||...              .++.|+.++.++++++.+.   + ..++|++||..
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~  140 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDV  140 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGG
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecch
Confidence            5899999998542              2357888888888888652   2 24677666554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.76  E-value=1.6e-17  Score=115.90  Aligned_cols=118  Identities=13%  Similarity=0.090  Sum_probs=91.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCch------HHHHHhhhhccCCeEEEEcccCChHHHHHHhc-
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDI------DKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+......      ...+.... ...++.++.+|++|+++++++++ 
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999998754211      11121111 23568899999999999999886 


Q ss_pred             ------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 ------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                            ++|++|||||...              .++.|+.++.++++++.+.    + ..+||++||...+
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~  192 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHc
Confidence                  5899999998532              2467899999999988653    3 4699999986643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.76  E-value=7.6e-18  Score=113.64  Aligned_cols=117  Identities=16%  Similarity=0.157  Sum_probs=87.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++....+...+..+. ...++.++.+|++|++++.++++       
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-KGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999762211111111111 24578899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++.+.+    .+ ..++|++||...
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~  169 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIG  169 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhh
Confidence            5899999998542              135677888777777654    44 579999997643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=6.3e-18  Score=115.60  Aligned_cols=116  Identities=9%  Similarity=0.094  Sum_probs=87.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cC---CeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQ---GAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~---~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++..    ..+....+.  ..   ++.++.+|++|+++++++++  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR----LEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999998621    111111111  22   68899999999999998876  


Q ss_pred             -----ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 -----RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -----~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                           ++|++|||||...                .++.|+.++.++++++.+..  ...++|++||...+
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~  170 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG  170 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhc
Confidence                 5899999998432                13467888888888876642  01599999986543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.76  E-value=1.3e-17  Score=112.56  Aligned_cols=108  Identities=14%  Similarity=0.142  Sum_probs=87.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+|+++||||+|+||+++++.|+++|++|++++|+....            ......+.+|++|++++.++++       
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999999987211            2356789999999999999886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~~  122 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~  145 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYA  145 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc
Confidence            5899999998542              134788888888887654    44 57999999876553

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.76  E-value=8.5e-18  Score=113.97  Aligned_cols=119  Identities=15%  Similarity=0.075  Sum_probs=90.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCc-------hHHH-HHhhhh--ccCCeEEEEcccCChHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD-------IDKL-QMLLSF--KKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~-------~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~   71 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.....       .... +.....  ...++.++.+|++|++++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            4678999999999999999999999999999998732110       1111 111111  24578899999999999988


Q ss_pred             Hhc-------ccCEEEEeCcccc------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           72 AVK-------RVDVVICTISGVH------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        72 ~~~-------~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                      +++       ++|++|||||...            .++.|+.++.++++++.+.. ...++|++||...
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  157 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh
Confidence            876       5899999998642            24678999999999998753 1358999998653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.76  E-value=4.2e-18  Score=114.49  Aligned_cols=118  Identities=14%  Similarity=0.111  Sum_probs=90.9

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+  ++||+++++.|+++|++|++++|++........+.+......++.++.+|++|+++++++++     
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            56889999999  89999999999999999999998875432233333332235678999999999999998876     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~  163 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSG  163 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGG
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccc
Confidence              3799999998542              24567888888888874    444 468999987654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.76  E-value=5.1e-18  Score=115.24  Aligned_cols=114  Identities=13%  Similarity=0.094  Sum_probs=88.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|++++.++++      
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGN----ALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHH----HHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999862    222222222  23568899999999999998886      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...               .++.|+.++.++++++.+.    + ..++|++||...+
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  149 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGH  149 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTT
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhC
Confidence             5899999998541               1356888888888887653    3 4699999986654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.76  E-value=1.4e-17  Score=111.68  Aligned_cols=116  Identities=16%  Similarity=0.147  Sum_probs=88.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++.    ...+..+.+  ...++..+++|++|+++++++++    
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~----~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED----RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999862    222222222  24568899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...               .++.|+.++..+.+++.    +.+ -.+||.+||...+
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~  148 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGI  148 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhc
Confidence               3899999998432               13467777766666664    445 4799999987643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.76  E-value=1.5e-17  Score=111.14  Aligned_cols=118  Identities=16%  Similarity=0.121  Sum_probs=88.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++||||+|+||++++++|+++|++|++.++..........+.... ...++.++.+|++|+++++++++       
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999885443322222222222 24568899999999999998886       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++.+++.    +.+ ..++|++||...+
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  154 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ  154 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGG
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhc
Confidence            5899999998542              24568888777766664    455 5799999987654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.76  E-value=7.8e-18  Score=111.62  Aligned_cols=115  Identities=14%  Similarity=0.103  Sum_probs=86.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      +|+++||||+|+||++++++|+++|++|+++ .|++...+ ...+..+. ...++.++.+|++|+++++++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHh-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999985 67641111 01111111 13468899999999999999887       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~  141 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVG  141 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHH
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhh
Confidence            5899999998542              235678888888888765    35 579999998753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.76  E-value=1.6e-18  Score=115.26  Aligned_cols=102  Identities=14%  Similarity=0.177  Sum_probs=84.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~v   79 (124)
                      |+++||||+|+||+++++.|+++|++|++++|+++...            .   .+.+|++++++++++++    ++|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~---~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE------------A---DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE------------C---CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc------------c---cccCCcccHHHHHHHHHHcCCCccEE
Confidence            68999999999999999999999999999999873211            1   16789999999999987    79999


Q ss_pred             EEeCcccc-------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           80 ICTISGVH-------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      |||||...       .++.|+.++.++++++.+.    + .+++|++||...|
T Consensus        67 i~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~  118 (255)
T 2dkn_A           67 VCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAAT  118 (255)
T ss_dssp             EECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             EECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccc
Confidence            99998653       2467889999999988764    4 5799999987655

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.76  E-value=5.6e-18  Score=114.18  Aligned_cols=117  Identities=15%  Similarity=0.074  Sum_probs=87.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++++++||||+|+||+++++.|+++|++|++.+++............ .....++.++.+|++|+++++++++       
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE-RDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHH-HTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35779999999999999999999999999999865511111111111 1124568999999999999998876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...              .++.|+.++.++++.+.+    .+ ..++|++||...
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~  165 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNG  165 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhh
Confidence            5899999998542              235678888888887754    44 479999998653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.76  E-value=2.2e-17  Score=112.88  Aligned_cols=120  Identities=10%  Similarity=0.020  Sum_probs=89.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC--------chHHHHHhhhh--ccCCeEEEEcccCChHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL--------DIDKLQMLLSF--KKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~--------~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~   71 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...        .+...+....+  ...++.++.+|++|++++.+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            357899999999999999999999999999999874211        11111111111  24578899999999999998


Q ss_pred             Hhc-------ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           72 AVK-------RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        72 ~~~-------~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      +++       ++|++|||||...               .++.|+.++.++++++.+.    +...+||++||...+
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            886       5899999998432               2356888888888887653    214689999987654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=2.1e-17  Score=111.60  Aligned_cols=111  Identities=18%  Similarity=0.190  Sum_probs=86.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++    .........  -.++.++.+|++|+++++++++       
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQE--LPGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHH--hcCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986    111111111  1347899999999999998876       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~  119 (124)
                      ++|++|||||...               .++.|+.++.++++++.+.   + ..++|++||..
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~  143 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLV  143 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCcc
Confidence            5899999998532               1356788888888888642   2 36999999764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.75  E-value=1.1e-17  Score=112.92  Aligned_cols=117  Identities=11%  Similarity=0.019  Sum_probs=88.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++.+++.....+...+.... ...++.++.+|++|+++++++++       +
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-AGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998866542211111122211 24568899999999999998886       5


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                      +|++|||||...              .++.|+.++.++++++.+.- ...++|++||...
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  165 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV  165 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh
Confidence            899999998542              13578999999999988752 1248999997653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.75  E-value=7.3e-18  Score=113.17  Aligned_cols=99  Identities=16%  Similarity=0.127  Sum_probs=83.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++||||+|++|+++++.|++ |++|++++|++..         .    .+   +.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~---------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI---------Q----GG---YKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC---------T----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC---------C----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence            4799999999999999999995 8999999998721         0    12   88999999999999986  999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +||...          .++.|+.++.++++++.+.+ . ++|++||...|
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~  111 (273)
T 2ggs_A           64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVF  111 (273)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGS
T ss_pred             CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeE
Confidence            998643          24568899999999999887 5 89999987654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.75  E-value=1e-17  Score=112.72  Aligned_cols=117  Identities=10%  Similarity=0.112  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....+. ..+....+  ...++.++.+|++|+++++++++     
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-ANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHH-HHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999886522111 11111122  23468899999999999999886     


Q ss_pred             --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...              .++.|+.++.++++++.+.  + ..++|++||...
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~  151 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLL  151 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhh
Confidence              5899999998542              2357889999999999875  3 468999987653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.75  E-value=9.2e-18  Score=112.24  Aligned_cols=114  Identities=11%  Similarity=0.093  Sum_probs=86.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++    ....+..+.+ ..++.++++|++|+++++++++.     
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE----AAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH----HHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999986    2211222222 45688999999999999888764     


Q ss_pred             --cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        +|++|||||....              ++.|+.++.++.+++.+    .+  .++|++||...+
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~  142 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW  142 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhc
Confidence              6999999985421              24566666666665543    33  699999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.75  E-value=2e-17  Score=110.14  Aligned_cols=111  Identities=19%  Similarity=0.130  Sum_probs=87.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+....        +.....++..+++|++|+++++++++   ++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV--------HAPRHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST--------TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--------hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            478999999999999999999999999999999987322        22234678899999999999999887   4899


Q ss_pred             EEEeCccccc------------eecchHHHHHHHHHHHHh---CCccEEEEecCCccc
Q 033236           79 VICTISGVHF------------RSHNILMQLKLVDAIREA---GNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~~------------~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~~  121 (124)
                      +|||||....            ++.|+.++..+.+++.+.   + -.+||.+||....
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~  138 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYST  138 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGT
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeecccc
Confidence            9999985432            356777777777766442   1 2689999987643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.75  E-value=2.3e-17  Score=112.01  Aligned_cols=120  Identities=16%  Similarity=0.073  Sum_probs=89.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-----------chHHHH-Hhhhh--ccCCeEEEEcccCChH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-----------DIDKLQ-MLLSF--KKQGAHLIEASFADHR   67 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-----------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~   67 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...           .....+ ....+  ...++.++.+|++|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            367899999999999999999999999999999873211           012221 11111  2356889999999999


Q ss_pred             HHHHHhc-------ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           68 SLVEAVK-------RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        68 ~~~~~~~-------~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      +++++++       ++|++|||||...               .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence            9998876       5899999998532               1356788888888887653    213589999987654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.75  E-value=1.3e-17  Score=110.53  Aligned_cols=113  Identities=12%  Similarity=0.100  Sum_probs=82.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhh--ccCCeEE-EEcccCChHHHHHHhc----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSF--KKQGAHL-IEASFADHRSLVEAVK----   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~-~~~D~~~~~~~~~~~~----   74 (124)
                      +|+++||||+|+||++++++|+++|++|+++ +|++.    ...+....+  ...++.. +.+|++|+++++++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNRE----KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHH----HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999998 67651    111111111  1345666 9999999999988865    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~~  120 (124)
                         ++|+||||||...              .++.|+.++.++++    .+.+.+ ..++|++||...
T Consensus        77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~  142 (245)
T 2ph3_A           77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVG  142 (245)
T ss_dssp             HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHH
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhh
Confidence               6899999998542              13467777555444    445566 689999998653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.75  E-value=2.1e-18  Score=117.57  Aligned_cols=106  Identities=19%  Similarity=0.274  Sum_probs=85.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----cCE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----VDV   78 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~d~   78 (124)
                      +++||||+|++|+++++.|+++| ++|++++|++....   ....   .  +++ +.+|+++++.+.+++++     +|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~---~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---FVNL---V--DLN-IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---GHHH---H--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---hhhc---C--cce-eccccccHHHHHHHHhccccCCCcE
Confidence            58999999999999999999999 99999999863211   1111   1  222 77899999999999985     999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |||+|+...        .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~  120 (310)
T 1eq2_A           72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATY  120 (310)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGG
T ss_pred             EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHh
Confidence            999998653        24578999999999999998 7 99999987654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.74  E-value=1.3e-17  Score=113.16  Aligned_cols=119  Identities=15%  Similarity=0.091  Sum_probs=86.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++...+.. .+.........+.++++|++|+++++++++       
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAA-AGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999986221111 111111123345899999999999998876       


Q ss_pred             ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----C-CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----G-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~-~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...               .++.|+.++.++.+++.+.    + ...++|++||...+
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  177 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ  177 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC
Confidence            4799999998531               2356788887777777553    1 12589999987644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.74  E-value=4.1e-17  Score=109.64  Aligned_cols=119  Identities=8%  Similarity=-0.015  Sum_probs=89.1

Q ss_pred             CCceEEEEccCCh--hcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGY--IGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~--iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++++++||||+|+  ||+++++.|+++|++|++++|+.... +...+........++.++.+|++|+++++++++     
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            3678999999966  99999999999999999999885211 112222222233478999999999999998876     


Q ss_pred             --ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...                  .++.|+.++.++++++.+... -.++|++||...+
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  152 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE  152 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence              4899999998542                  124678888899999887631 2489999987654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.74  E-value=2.3e-17  Score=110.43  Aligned_cols=113  Identities=15%  Similarity=0.166  Sum_probs=86.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      |+|+++||||+|+||+++++.|+++|  +.|++.+|++     ...+........++.++.+|++|+++++++++     
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE-----APLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH-----HHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH-----HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            46889999999999999999999885  7888888886     22222222124578899999999999999886     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...               .++.|+.++.++++++.    +.+  .++|++||...+
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~  141 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACN  141 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCC
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhc
Confidence              5899999998632               23568888888888884    343  689999987654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.74  E-value=2.8e-17  Score=110.51  Aligned_cols=116  Identities=15%  Similarity=0.071  Sum_probs=87.6

Q ss_pred             CceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +|+++||||+  |+||+++++.|+++|++|++++|++ .. ....+.+... .....++.+|++|+++++++++      
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999  9999999999999999999999986 22 2222222221 1234789999999999998886      


Q ss_pred             -ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...                   .++.|+.++.++++++.+.-. ..++|++||...+
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  153 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE  153 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhc
Confidence             5899999998532                   124578899999999987630 2489999986543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.74  E-value=1.9e-17  Score=111.67  Aligned_cols=117  Identities=15%  Similarity=0.094  Sum_probs=85.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +++++||||+|+||++++++|+++|++|++..+......+...+.... ...++.++.+|++|+++++++++       +
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-SGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            567999999999999999999999999988744431111111111111 23568899999999999998876       5


Q ss_pred             cCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC------CccEEEEecCCcc
Q 033236           76 VDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG------NVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~~  120 (124)
                      +|++|||||....               ++.|+.++.++++++.+.-      ...++|++||...
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  170 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAA  170 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHh
Confidence            7999999985421               3567888888888886641      1358999998654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.74  E-value=4.7e-17  Score=110.08  Aligned_cols=120  Identities=14%  Similarity=0.076  Sum_probs=88.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC--------chHHHH-Hhhhh--ccCCeEEEEcccCChHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL--------DIDKLQ-MLLSF--KKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~--------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~   70 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+...+        .....+ .....  ...++.++.+|++|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            357899999999999999999999999999999853110        112111 11111  2457889999999999999


Q ss_pred             HHhc-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           71 EAVK-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        71 ~~~~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      ++++       ++|++|||||...              .++.|+.++.++++++.+.    +...++|++||...+
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence            8876       4899999998542              1456888888888886543    213589999987644

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.74  E-value=2.3e-17  Score=110.76  Aligned_cols=117  Identities=15%  Similarity=0.022  Sum_probs=88.6

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+  |+||+++++.|+++|++|++++|++.  .....+.+... ...+.++.+|++|+++++++++     
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--LRPEAEKLAEA-LGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG--GHHHHHHHHHH-TTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999  99999999999999999999999862  11122222211 1247899999999999998876     


Q ss_pred             --ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...                  .++.|+.++.++++++.+.-. ..++|++||...+
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  151 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE  151 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence              5899999998532                  134678899999999987520 2489999986543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.74  E-value=3.3e-17  Score=111.26  Aligned_cols=116  Identities=9%  Similarity=0.023  Sum_probs=88.1

Q ss_pred             CceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +|+++||||+  |+||+++++.|+++|++|++++|++. . ....+.+... ..++.++.+|++|++++.++++      
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-EKRVREIAKG-FGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999  99999999999999999999999862 1 1122222111 1247889999999999998876      


Q ss_pred             -ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...                  .++.|+.++.++++++.+..  ...++|++||...+
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~  165 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAE  165 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGT
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence             5899999998532                  13467889999999997753  12699999986543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.74  E-value=1.6e-17  Score=110.49  Aligned_cols=118  Identities=18%  Similarity=0.166  Sum_probs=87.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc--CChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF--ADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~-----   74 (124)
                      .+|+++||||+|+||+++++.|+++|++|++++|++...+. ..+........+..++.+|+  ++++++.++++     
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAE-VSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHH-HHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999998622111 11222222235677788777  89988888775     


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...               .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~  158 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGR  158 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGT
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhc
Confidence              5899999998531               135688899888888853    33 4689999976543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.74  E-value=3.6e-17  Score=110.55  Aligned_cols=117  Identities=11%  Similarity=0.075  Sum_probs=88.9

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+  |+||+++++.|+++|++|++++|++. . ....+.+... ...+.++.+|++|++++.++++     
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999  99999999999999999999999873 1 1222222221 1247899999999999998876     


Q ss_pred             --ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...                  .++.|+.++.++++++.+.-. ..++|++||...+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST  149 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc
Confidence              5799999998542                  134678899999999987620 2589999986543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.74  E-value=2.1e-18  Score=125.23  Aligned_cols=115  Identities=17%  Similarity=0.235  Sum_probs=89.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH-HH-HHh--------hhhccCCeEEEEcccCChHHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID-KL-QML--------LSFKKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~~-~~~--------~~~~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      +|+++||||+|++|+++++.|.+.|++|++++|++...... .. +.+        ......+++++.+|+++++.+. +
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  228 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  228 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence            47899999999999999999999999999999987421100 00 111        1122468999999999988888 7


Q ss_pred             hcccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           73 VKRVDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        73 ~~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      ..++|+|||+|+...       ..+.|+.++.++++++.+ + .++++|+||...
T Consensus       229 ~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v  281 (508)
T 4f6l_B          229 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV  281 (508)
T ss_dssp             SSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT
T ss_pred             ccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh
Confidence            788999999998653       345689999999999998 5 689999997654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.74  E-value=2.1e-17  Score=110.23  Aligned_cols=107  Identities=19%  Similarity=0.214  Sum_probs=84.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++...+             .+..+.+|++|+++++++++      
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999999999999873211             11238899999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  144 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL  144 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhc
Confidence             4799999998542              235678888888887754    44 5799999987543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.74  E-value=1.3e-17  Score=110.22  Aligned_cols=106  Identities=18%  Similarity=0.127  Sum_probs=85.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   75 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++.              ...+.++.+|++|++++.++++      +
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   66 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAP   66 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------------ccceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence            3578999999999999999999999999999999872              1245789999999999999987      6


Q ss_pred             cCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC---------ccEEEEecCCccc
Q 033236           76 VDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN---------VKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~ss~~~~  121 (124)
                      +|++|||+|...                  .++.|+.++.++++++.+...         ..++|++||...+
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  139 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  139 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence            899999998432                  124678889999998876420         1289999987543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.74  E-value=1e-17  Score=110.88  Aligned_cols=109  Identities=16%  Similarity=0.169  Sum_probs=86.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++....            ....++.+|++|++++.++++      
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            67889999999999999999999999999999999873211            134678899999999888875      


Q ss_pred             ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                         ++|++|||||...               .++.|+.++.++++++.+.- ...++|++||...+
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  134 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM  134 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence               6899999998431               13467888999999988752 02589999987654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.73  E-value=5.4e-18  Score=109.84  Aligned_cols=108  Identities=13%  Similarity=0.177  Sum_probs=85.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi   80 (124)
                      |+++||||+|++|++++++|+++  +|++++|++    ....+......  . +++.+|++|++++.++++   ++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~----~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA----GALAELAREVG--A-RALPADLADELEAKALLEEAGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH----HHHHHHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH----HHHHHHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence            57999999999999999999998  999999976    12111111111  2 889999999999999998   899999


Q ss_pred             EeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |++|...              .++.|+.++.++++++.+.+ ..++|++||...+
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~  125 (207)
T 2yut_A           72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRY  125 (207)
T ss_dssp             ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHH
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhc
Confidence            9998542              23568899999999996666 6899999987543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.73  E-value=2.8e-17  Score=111.20  Aligned_cols=115  Identities=18%  Similarity=0.103  Sum_probs=89.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|.++||||+++||+++++.|+++|++|++.+|+.    +...+..+. ...+...+++|++|+++++++++.      
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~----~~l~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK----DVLDAAIAE-IGGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHH-cCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999986    222222222 245678899999999999988763      


Q ss_pred             -cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 -VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                       +|++|||||...              .++.|+.++..+++++.+.- +-.++|.+||...+
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence             899999998542              24678899999999887642 12488988876543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.73  E-value=1.7e-17  Score=112.65  Aligned_cols=118  Identities=20%  Similarity=0.172  Sum_probs=86.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++||||+|+||+++++.|+++|++|++++|++...+.. .+........++.++.+|++|++++.++++       
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKV-VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999986221111 111111122368899999999999988876       


Q ss_pred             ccCEEEEe-Ccccc-------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCccc
Q 033236           75 RVDVVICT-ISGVH-------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~-a~~~~-------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~~  121 (124)
                      ++|++||| +|...             .++.|+.++.++++++.+.   + ..++|++||...+
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~  168 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK  168 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccc
Confidence            58999999 45321             1356788888888887653   2 2589999976544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.73  E-value=3.7e-17  Score=111.16  Aligned_cols=120  Identities=16%  Similarity=0.100  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC-CCCchHHHHHhhhhccCCeEEEEcccCC----hHHHHHHhc-
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD-IGLDIDKLQMLLSFKKQGAHLIEASFAD----HRSLVEAVK-   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~-   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++ ...+ ...+.+......++.++.+|++|    ++++.++++ 
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV-SLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            4568899999999999999999999999999999986 2211 11111211124568899999999    888888876 


Q ss_pred             ------ccCEEEEeCcccc------------------------ceecchHHHHHHHHHHHHhCC---------ccEEEEe
Q 033236           75 ------RVDVVICTISGVH------------------------FRSHNILMQLKLVDAIREAGN---------VKKRKLN  115 (124)
Q Consensus        75 ------~~d~vi~~a~~~~------------------------~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~  115 (124)
                            ++|++|||||...                        .++.|+.++.++++++.+...         ..++|++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                  5899999998531                        123567788888888866421         2489999


Q ss_pred             cCCccc
Q 033236          116 EGMIPF  121 (124)
Q Consensus       116 ss~~~~  121 (124)
                      ||...+
T Consensus       180 sS~~~~  185 (288)
T 2x9g_A          180 CDAMVD  185 (288)
T ss_dssp             CCTTTT
T ss_pred             eccccc
Confidence            987654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.73  E-value=2.8e-17  Score=113.29  Aligned_cols=120  Identities=12%  Similarity=0.127  Sum_probs=89.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-------chHHH-HHhhhh--ccCCeEEEEcccCChHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-------DIDKL-QMLLSF--KKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~   71 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....       ..... +.....  ...++.++.+|++|++++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            467899999999999999999999999999998873221       01111 111111  24568899999999999998


Q ss_pred             Hhc-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236           72 AVK-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF  121 (124)
Q Consensus        72 ~~~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~  121 (124)
                      +++       ++|++|||||...              .++.|+.++.++++++.+.    +...+||++||...+
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            886       5899999998542              2357888888888887543    213579999987654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.73  E-value=2.8e-17  Score=111.29  Aligned_cols=114  Identities=14%  Similarity=0.199  Sum_probs=86.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~   76 (124)
                      +++++||||+|+||+++++.|+++|++|++++|+.     ...+........++.++.+|++|+++++++++      ++
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA-----EKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999986     22222222224578999999999999999886      48


Q ss_pred             CEEEEeCccc--------------------cceecchHHHHHHHHHHHHhC---------CccEEEEecCCccc
Q 033236           77 DVVICTISGV--------------------HFRSHNILMQLKLVDAIREAG---------NVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~--------------------~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~ss~~~~  121 (124)
                      |++|||++..                    ..++.|+.++.++++++.+..         ...++|++||...+
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY  178 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence            9999994321                    113457888888888876431         13589999987654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.73  E-value=1.3e-17  Score=111.90  Aligned_cols=116  Identities=14%  Similarity=0.073  Sum_probs=87.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++.    ...+..+.+  ...++..+++|++|+++++++++.    
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~----~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRAT----LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHH----HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999862    222222222  245688999999999999888763    


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                         +|++|||||...              .++.|+.++..+.+++.+    .+.-.+||.+||...+
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence               899999998542              135678888777776643    2214699999987643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.73  E-value=6.5e-17  Score=107.26  Aligned_cols=108  Identities=23%  Similarity=0.253  Sum_probs=82.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++    +...   +.+   ++..+.+|+++ +++.++++       
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~----~~~~---~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP----EEAA---QSL---GAVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHH---HHH---TCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHH---Hhh---CcEEEecCCch-HHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999987    2211   111   37889999999 77776654       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  133 (239)
T 2ekp_A           70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTF  133 (239)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc
Confidence            5899999998532              13467788877777774    445 5799999987644

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.73  E-value=4.3e-17  Score=109.32  Aligned_cols=116  Identities=13%  Similarity=0.018  Sum_probs=84.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|++.    ...+....+  ...++.++.+|++|++++.++++    
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD----TLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999862    111111111  13467899999999998888764    


Q ss_pred             ----ccCEEEEeCc--cc-------------------cceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 ----RVDVVICTIS--GV-------------------HFRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ----~~d~vi~~a~--~~-------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                          ++|++|||||  ..                   ...+.|+.++.++.+++.    +.+ ..++|++||...+
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  153 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSL  153 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGT
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhc
Confidence                3699999994  21                   012456677766666654    444 5799999986543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.73  E-value=2.2e-17  Score=113.95  Aligned_cols=119  Identities=14%  Similarity=0.027  Sum_probs=87.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC------CCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHh
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD------IGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~------~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      ++++++||||+|+||+++++.|+++|++|++++|+.      ........+....+  ...++.++.+|++|++++.+++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999998871      00001111222222  2346789999999999999888


Q ss_pred             c-------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC---------ccEEEEecCCcc
Q 033236           74 K-------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN---------VKKRKLNEGMIP  120 (124)
Q Consensus        74 ~-------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~ss~~~  120 (124)
                      +       ++|++|||||...              .++.|+.++.++++++.+...         -.+||++||...
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            6       5899999998542              245788888888888765420         048999998653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.72  E-value=6.6e-17  Score=108.93  Aligned_cols=113  Identities=14%  Similarity=0.043  Sum_probs=87.0

Q ss_pred             CceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            3 KSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         3 ~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +|+++||||  +|+||+++++.|+++|++|++++|++    ....+........++.++.+|++|+++++++++      
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR----LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC----HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh----HHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999  99999999999999999999999986    221122222123467899999999999998876      


Q ss_pred             ----ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ----RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ----~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                          ++|++|||||...                   .++.|+.++.++++++.+.- .-.++|++||..
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~  151 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP  151 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCC
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcc
Confidence                7899999998542                   12467888899999997652 024899888654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.72  E-value=7.4e-17  Score=109.92  Aligned_cols=116  Identities=17%  Similarity=0.176  Sum_probs=87.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEe-CCCCCCchHHHHHhhhh---ccCCeEEEEcccCChH----------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ-RPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHR----------   67 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~----------   67 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++ |++.    ...+....+   ...++.++.+|+++++          
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA----EANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHH----HHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            467899999999999999999999999999999 8762    111111121   2456889999999999          


Q ss_pred             -------HHHHHhc-------ccCEEEEeCcccc----------------------------ceecchHHHHHHHHHHHH
Q 033236           68 -------SLVEAVK-------RVDVVICTISGVH----------------------------FRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        68 -------~~~~~~~-------~~d~vi~~a~~~~----------------------------~~~~~~~~~~~~~~~~~~  105 (124)
                             ++.++++       ++|++|||||...                            .++.|+.++.++++++.+
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   8888876       5899999998532                            123567788888887764


Q ss_pred             h---CC------ccEEEEecCCccc
Q 033236          106 A---GN------VKKRKLNEGMIPF  121 (124)
Q Consensus       106 ~---~~------~~~~i~~ss~~~~  121 (124)
                      .   ..      ..++|++||...+
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~  188 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTN  188 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTT
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhc
Confidence            2   11      2689999987654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.72  E-value=3.1e-17  Score=109.41  Aligned_cols=119  Identities=14%  Similarity=0.040  Sum_probs=87.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+|+||+++++.|+++|++|+++.+++............. ...++.++.+|+++.++++++++.      
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-cCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            4688999999999999999999999999988754442211111111111 235678999999999988887653      


Q ss_pred             -------cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           76 -------VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                             +|++|||||...              .++.|+.++.++++++.+.- ...++|++||...+
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~  152 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR  152 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc
Confidence                   899999998542              13568899999999987751 13589999987654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.72  E-value=3.3e-17  Score=108.98  Aligned_cols=108  Identities=14%  Similarity=0.205  Sum_probs=87.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----R   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~   75 (124)
                      ++|+++||||+|+||+++++.|++ .|+.|++.+|++..            ....+.++.+|++|++++.++++     +
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHHhCC
Confidence            467899999999999999999999 78999999988621            12456899999999999999886     6


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++++++.+... -.++|++||...+
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~  131 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF  131 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc
Confidence            899999998542              246789999999999887631 1389999987654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.72  E-value=6.2e-17  Score=108.13  Aligned_cols=106  Identities=16%  Similarity=0.211  Sum_probs=84.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      |+|+++||||+|+||+++++.|+++|++|++++|++...              ....+.+|++|+++++++++.      
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999987321              124678999999999988764      


Q ss_pred             -cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           76 -VDVVICTISGVH---------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                       +|++|||||...               .++.|+.++.++++++.+... -.++|++||...+
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL  149 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc
Confidence             699999998531               135688999999999987631 2489999987654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.72  E-value=1.3e-16  Score=108.95  Aligned_cols=117  Identities=13%  Similarity=0.009  Sum_probs=88.3

Q ss_pred             CCceEEEEccCCh--hcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGY--IGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~--iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|+  ||+++++.|+++|++|++.+|++..  .+..+.... ...++.++.+|++|+++++++++     
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL--KKRVEPLAE-ELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH--HHHHHHHHH-HHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHH-hcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            4678999999966  9999999999999999999998511  111111111 12468899999999999999886     


Q ss_pred             --ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...                  .++.|+.++.++++++.+.- ...++|++||...+
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~  174 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAE  174 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGT
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhc
Confidence              5899999998542                  13568899999999998753 13589999976644

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.72  E-value=9e-18  Score=122.30  Aligned_cols=100  Identities=15%  Similarity=0.128  Sum_probs=80.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+|+||||+|+||+++++.|++.|++|++++|++...                +.+.+|+.+.  +.++++++|+|||+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence            57999999999999999999999999999999987321                2367787643  46677899999999


Q ss_pred             Ccccc-----------ceecchHHHHHHHHH-HHHhCCccEEEEecCCccc
Q 033236           83 ISGVH-----------FRSHNILMQLKLVDA-IREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+...           .++.|+.++.+++++ +.+.+ ++++|++||...|
T Consensus       209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vy  258 (516)
T 3oh8_A          209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFY  258 (516)
T ss_dssp             CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGG
T ss_pred             CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEe
Confidence            98641           235689999999999 45555 8899999987766

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.72  E-value=4.6e-17  Score=112.67  Aligned_cols=117  Identities=15%  Similarity=0.207  Sum_probs=88.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-----ccCCeEEEEcccCChHHHHHHhcc--
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-----KKQGAHLIEASFADHRSLVEAVKR--   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--   75 (124)
                      +++++||||+|+||+++++.|+++|++|+++.|+....+.... .....     ...++.++.+|++|+++++++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR-LWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHH-HHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHH-HHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5789999999999999999999999999888876543322111 11111     135688999999999999999875  


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                         +|++|||||...              .+++|+.++.++++++.    +.+ ..+||++||...+
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~  146 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGL  146 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc
Confidence               899999998531              24578888888888863    345 5799999976544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.72  E-value=2.3e-17  Score=106.66  Aligned_cols=98  Identities=17%  Similarity=0.192  Sum_probs=81.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi   80 (124)
                      |+++||||+|++|+++++.|+ +|++|++++|++.                   .+.+|++|++++++++++   +|+||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~vi   63 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAIV   63 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence            589999999999999999999 9999999999871                   478999999999999876   89999


Q ss_pred             EeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           81 CTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                      |+||...              .++.|+.++.++++++.+.-. ..+++++||...+
T Consensus        64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~  119 (202)
T 3d7l_A           64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMME  119 (202)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGT
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhc
Confidence            9998431              124688999999999987620 1589999876543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.71  E-value=1e-16  Score=111.03  Aligned_cols=116  Identities=17%  Similarity=0.176  Sum_probs=86.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEe-CCCCCCchHHHHHhhhh---ccCCeEEEEcccCChH----------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ-RPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHR----------   67 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~----------   67 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++ |++.    ...+....+   ...++.++.+|++|++          
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA----EANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            457899999999999999999999999999999 8752    111111111   2356889999999999          


Q ss_pred             -------HHHHHhc-------ccCEEEEeCcccc----------------------------ceecchHHHHHHHHHHHH
Q 033236           68 -------SLVEAVK-------RVDVVICTISGVH----------------------------FRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        68 -------~~~~~~~-------~~d~vi~~a~~~~----------------------------~~~~~~~~~~~~~~~~~~  105 (124)
                             +++++++       ++|++|||||...                            .++.|+.++.++++++.+
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   8888876       5899999998531                            124567788888887764


Q ss_pred             h----CC-----ccEEEEecCCccc
Q 033236          106 A----GN-----VKKRKLNEGMIPF  121 (124)
Q Consensus       106 ~----~~-----~~~~i~~ss~~~~  121 (124)
                      .    +.     ..+||++||...+
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~  225 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTN  225 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTT
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhc
Confidence            2    20     2689999987654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.71  E-value=6.7e-17  Score=108.95  Aligned_cols=107  Identities=19%  Similarity=0.166  Sum_probs=84.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.+|+....             .....+.+|++|++++.++++       
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999987221             112345899999998888765       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~~  122 (124)
                      ++|++|||||...              .++.|+.++.++++++    .+.+ ..++|++||...+.
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~  158 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR  158 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTB
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC
Confidence            5899999998542              1347888998888888    4455 57999999876543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.71  E-value=8.3e-17  Score=107.38  Aligned_cols=115  Identities=17%  Similarity=0.196  Sum_probs=88.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+..   ++..+.... ...++..+.+|++|+++++++++  ++|++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            4689999999999999999999999999999999752   222232222 34578899999999999988876  49999


Q ss_pred             EEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           80 ICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      |||||...              .++.|+.++..+.+++.+    .+.-.+||.+||...
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            99998542              245688888777776543    332368999998754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.71  E-value=1.5e-16  Score=108.64  Aligned_cols=117  Identities=13%  Similarity=0.001  Sum_probs=88.5

Q ss_pred             CCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|  +||+++++.|+++|++|++++|++..  ....+.... ....+.++++|++|+++++++++     
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF--KKRVDPLAE-SLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHH-HHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHH-hcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999997  99999999999999999999998521  111111111 12346899999999999999886     


Q ss_pred             --ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...                  .++.|+.++.++++++.+.-. ..++|++||...+
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~  173 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE  173 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc
Confidence              4799999998542                  135688999999999987531 2489999876543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.71  E-value=4.9e-17  Score=108.93  Aligned_cols=117  Identities=14%  Similarity=0.104  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhh---CCCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLA---QGHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      |++|+++||||+|+||+++++.|++   +|++|++++|++.    ...+..+.+    ...++.++.+|++|++++.+++
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES----MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL   79 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH----HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHH----HHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHH
Confidence            4678899999999999999999999   8999999999862    211111121    1346889999999999988876


Q ss_pred             c---------ccC--EEEEeCcccc---------c--------eecchHHHHHHHHHHHHhC-----CccEEEEecCCcc
Q 033236           74 K---------RVD--VVICTISGVH---------F--------RSHNILMQLKLVDAIREAG-----NVKKRKLNEGMIP  120 (124)
Q Consensus        74 ~---------~~d--~vi~~a~~~~---------~--------~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ss~~~  120 (124)
                      +         ++|  ++|||||...         .        ++.|+.++.++++++.+.-     ...++|++||...
T Consensus        80 ~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A           80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh
Confidence            4         258  9999998531         1        2457888899999987642     1357999998765


Q ss_pred             c
Q 033236          121 F  121 (124)
Q Consensus       121 ~  121 (124)
                      +
T Consensus       160 ~  160 (259)
T 1oaa_A          160 L  160 (259)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.70  E-value=2.6e-17  Score=109.90  Aligned_cols=102  Identities=15%  Similarity=0.131  Sum_probs=83.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----cCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----VDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~v   79 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++...+           .   . +.+|+++++++++++++    +|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~---~-~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------A---D-LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C---C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------c---c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            68999999999999999999999999999999872211           1   1 67899999999999865    5999


Q ss_pred             EEeCcccc-------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           80 ICTISGVH-------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      |||||...       .++.|+.++.++++++.+    .+ ..++|++||...+
T Consensus        67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  118 (257)
T 1fjh_A           67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASA  118 (257)
T ss_dssp             EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhh
Confidence            99998654       246788999888888864    34 4799999987655

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.70  E-value=7.2e-17  Score=107.16  Aligned_cols=107  Identities=16%  Similarity=0.168  Sum_probs=85.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   74 (124)
                      +|+++||||+|+||+++++.|+++|++|++++|++....            ....++.+|++|++++.++++        
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999873211            134678899999999988876        


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...               .++.|+.++.++++++.+.-. ..++|++||...+
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  138 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL  138 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHc
Confidence             6899999998532               134678889999999887520 2589999987654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.70  E-value=2.8e-16  Score=105.63  Aligned_cols=115  Identities=16%  Similarity=0.099  Sum_probs=87.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+....  +..+.... ...++.++.+|++|+++++++++       
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999987432  22222222 34678899999999999888876       


Q ss_pred             ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH-------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...             .++.|+.++..+.+++.+.   + -.+||.+||...
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~  143 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTA  143 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhh
Confidence            3899999998532             1356777777777666432   2 268999998754

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.70  E-value=3.8e-17  Score=114.28  Aligned_cols=90  Identities=13%  Similarity=0.268  Sum_probs=77.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      |+++||||+|++|+++++.|+++|+ +|++.+|+                           .|++++.++++++|+|||+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~   53 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL   53 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence            5899999999999999999999998 77666553                           6889999999999999999


Q ss_pred             Cccc------cceecchHHHHHHHHHHHHhCCcc-EEEEecCCccc
Q 033236           83 ISGV------HFRSHNILMQLKLVDAIREAGNVK-KRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss~~~~  121 (124)
                      |+..      ...+.|+.++.++++++.+.+ ++ ++|++||...|
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQAT   98 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGG
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhc
Confidence            9854      345678999999999999988 66 99999987654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.69  E-value=6.1e-16  Score=104.78  Aligned_cols=116  Identities=14%  Similarity=0.073  Sum_probs=88.0

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++|+++||||+  ++||+++++.|+++|++|++++|+.  . ....+.+.. ...++.++.+|++|+++++++++.    
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~-~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--F-KDRVEKLCA-EFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--C-HHHHHHHHG-GGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--H-HHHHHHHHH-hcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            36789999998  5599999999999999999999986  1 222232222 224588999999999999988764    


Q ss_pred             ---cCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           76 ---VDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ---~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                         +|++|||||...                   .++.|+.++.++++++.+.-  ...++|++||...+
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~  170 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE  170 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence               799999998542                   13467888888998887641  13689999976544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.69  E-value=6.8e-16  Score=103.55  Aligned_cols=118  Identities=10%  Similarity=0.080  Sum_probs=85.4

Q ss_pred             CCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+|  +||+++++.|+++|++|++.+|++...+ +..+..+.....++.++++|++|++++.++++     
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK-ELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999876  9999999999999999999999863322 22233333344578899999999999988876     


Q ss_pred             --ccCEEEEeCccccc------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVHF------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~~------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                        ++|++|||+|....                  .+.|..+...+.+.+.+.. .-.+||.+||...
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence              38999999984321                  1234555566666665432 1258999987654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.69  E-value=3.4e-16  Score=104.51  Aligned_cols=106  Identities=20%  Similarity=0.254  Sum_probs=77.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh---cccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV---KRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~   78 (124)
                      ++|+++||||+|+||+++++.|+++|++|++++|++     ..   .+.+  ..+.++ +|+  .+++++++   .++|+
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~---~~~~--~~~~~~-~D~--~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-----EL---LKRS--GHRYVV-CDL--RKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-----HH---HHHT--CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH-----HH---HHhh--CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence            568899999999999999999999999999999986     11   2222  256667 999  44455544   47999


Q ss_pred             EEEeCccccc--------------eecchHHHHHHH----HHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVHF--------------RSHNILMQLKLV----DAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|||||....              ++.|+.++.++.    +.+.+.+ ..++|++||...+
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  144 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI  144 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhc
Confidence            9999985321              245666665554    4445566 6899999987654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.68  E-value=5.1e-16  Score=104.27  Aligned_cols=117  Identities=14%  Similarity=0.008  Sum_probs=88.3

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      .+|+++||||+  |+||+++++.|+++|++|++++|+...  ....+.... ....+.++.+|++|+++++++++     
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAA-EFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh--HHHHHHHHH-HcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            46889999998  999999999999999999999998521  122222211 12357899999999999999886     


Q ss_pred             --ccCEEEEeCccccc-------------------eecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVHF-------------------RSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                        ++|++|||||....                   ++.|+.++.++++++.+.-. ..++|++||...+
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  158 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE  158 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc
Confidence              47999999985321                   24578888999999877520 2489998876543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.68  E-value=1.9e-16  Score=114.78  Aligned_cols=117  Identities=19%  Similarity=0.221  Sum_probs=90.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCc--hHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLD--IDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV--   76 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   76 (124)
                      .+++++||||+|+||.+++++|+++|++ |++++|+.....  .+..+.+.. ...++.++.+|++|++++.++++++  
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999984 899999863211  111111211 2346889999999999999998764  


Q ss_pred             ----CEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           77 ----DVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        77 ----d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                          |.|||+||...              .+++|+.++.++.+++.+.+ ..+||++||...
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~  364 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFAS  364 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHH
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHh
Confidence                99999998542              13568999999999998877 789999997643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.68  E-value=4.3e-16  Score=104.90  Aligned_cols=105  Identities=17%  Similarity=0.189  Sum_probs=81.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+++||+++++.|+++|++|++.+|+..+            .......+++|++++++++++++       +
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------------GLPEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998621            01223478999999999888876       3


Q ss_pred             cCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 VDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      +|++|||||...                .++.|+.++.++.+++.    +.+ -.++|++||...
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~  142 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQR  142 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhh
Confidence            899999998431                13467777776666654    455 468999987653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.68  E-value=2e-16  Score=113.75  Aligned_cols=113  Identities=13%  Similarity=0.145  Sum_probs=88.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+++++||||+|+||.++++.|+++|++|++++|++..  ....+..   ...+..++.+|++|+++++++++       
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--~~l~~~~---~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKRVA---DKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--HHHHHHH---HHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHH---HHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999886411  1111111   22356789999999999988875       


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~  120 (124)
                       .+|+||||||...              .+++|+.++.++.+++.+.    + ..+||++||...
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~  350 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAG  350 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHH
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHh
Confidence             3999999998642              2457899999999999876    4 569999998654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.67  E-value=1.5e-16  Score=104.56  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=81.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~v   79 (124)
                      +|+++||||+|+||+++++.|+++|++|++.+|++.                      +|++|+++++++++   ++|++
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~id~l   63 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGAFDHL   63 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCCCCEE
Confidence            578999999999999999999999999999999761                      89999999999987   58999


Q ss_pred             EEeCcccc---------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           80 ICTISGVH---------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                      |||||...               .++.|+.++.++++++.+.-. -.+++++||...+
T Consensus        64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~  121 (223)
T 3uce_A           64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR  121 (223)
T ss_dssp             EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT
T ss_pred             EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc
Confidence            99998541               135688999999999987631 2489999987654

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.4e-16  Score=107.31  Aligned_cols=97  Identities=24%  Similarity=0.270  Sum_probs=72.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+|+||||+|+||+++++.|+++||+|++++|++..              .   -+.+|    +...+.++++|+|+|++
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~---~~~~~----~~~~~~l~~~d~vihla   59 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------G---RITWD----ELAASGLPSCDAAVNLA   59 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------T---EEEHH----HHHHHCCCSCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------C---eeecc----hhhHhhccCCCEEEEec
Confidence            689999999999999999999999999999998711              1   12222    33345678899999999


Q ss_pred             ccc--------------cceecchHHHHHHHHHHHHhCC-ccEEEEecCCccc
Q 033236           84 SGV--------------HFRSHNILMQLKLVDAIREAGN-VKKRKLNEGMIPF  121 (124)
Q Consensus        84 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~~~~  121 (124)
                      +..              .+.+.|+.++.++++++...+. ..+++++||...|
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vy  112 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYY  112 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGS
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeee
Confidence            732              1234578899999999988762 3457777776655

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.66  E-value=5e-16  Score=113.14  Aligned_cols=116  Identities=18%  Similarity=0.188  Sum_probs=89.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc--cC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR--VD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--~d   77 (124)
                      +++++||||+|+||.+++++|+++|+ +|++++|+...... ..+....+.  ..++.++.+|++|++++.+++++  +|
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-AAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-HHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            57899999999999999999999998 68888998632111 111112222  34588999999999999999986  99


Q ss_pred             EEEEeCccccc--------------eecchHHHHHHHHHHHHh-CCccEEEEecCCcc
Q 033236           78 VVICTISGVHF--------------RSHNILMQLKLVDAIREA-GNVKKRKLNEGMIP  120 (124)
Q Consensus        78 ~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~  120 (124)
                      +|||+||....              +..|+.++.++.+.+.+. + ..+||++||...
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~  394 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTG  394 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGG
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHh
Confidence            99999985431              346788999999888765 5 689999997654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.65  E-value=2.6e-15  Score=89.04  Aligned_cols=96  Identities=21%  Similarity=0.230  Sum_probs=77.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++++|+|+ |++|+.+++.|.+.| ++|++++|++     .+.+   .....++..+.+|+.+++++.++++++|+||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~-----~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL-----AALA---VLNRMGVATKQVDAKDEAGLAKALGGFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH-----HHHH---HHHTTTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH-----HHHH---HHHhCCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence            3578999999 999999999999999 9999999986     2222   2234678889999999999999999999999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ++++..        ....+++++.+.+ ++++.+.
T Consensus        75 ~~~~~~--------~~~~~~~~~~~~g-~~~~~~~  100 (118)
T 3ic5_A           75 SAAPFF--------LTPIIAKAAKAAG-AHYFDLT  100 (118)
T ss_dssp             ECSCGG--------GHHHHHHHHHHTT-CEEECCC
T ss_pred             ECCCch--------hhHHHHHHHHHhC-CCEEEec
Confidence            999732        2478889999888 5554443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.65  E-value=1.1e-15  Score=111.01  Aligned_cols=116  Identities=17%  Similarity=0.168  Sum_probs=90.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCch--HHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDI--DKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      +++++||||+|+||.++++.|+++|+ +|+++.|+......  +..+.+.. ...++.++.+|++|++++.++++.    
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-LGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999997 78888887522211  11122211 245688999999999999999864    


Q ss_pred             --cCEEEEeCccc-c--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGV-H--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                        +|+||||||.. .              .+++|+.++.++.+.+.+.+ ..+||++||...
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~  378 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAA  378 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHh
Confidence              79999999965 2              14578999999999998887 789999987653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.63  E-value=3.7e-15  Score=102.88  Aligned_cols=116  Identities=16%  Similarity=0.143  Sum_probs=79.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-----CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-----LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|++.++....     ...........+..... ...+|+++.+++.++++  
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999997653210     00111111222222222 23589999987777654  


Q ss_pred             -----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236           75 -----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~  119 (124)
                           ++|++|||||...              .++.|+.++.++++++.    +.+ ..+||++||..
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~  153 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS  153 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh
Confidence                 5899999998532              13567888888877774    345 57999999854

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.60  E-value=1.5e-15  Score=100.90  Aligned_cols=110  Identities=21%  Similarity=0.213  Sum_probs=74.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHH---Hh---cc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVE---AV---KR   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~---~~   75 (124)
                      ++|+++||||+|+||+++++.|++ |+.|++++|++     ...+....  ..++..+.+|+++.+....   .+   .+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP-----EHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH-----HHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH-----HHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence            468899999999999999999988 89999999986     22222222  3568899999988755222   22   25


Q ss_pred             cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      +|++|||||...              .++.|+.++.++.+++.+    .+  .++|++||...+
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~  137 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGN  137 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC-----
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccc
Confidence            899999998542              135678887777777654    33  589999987654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.60  E-value=6.6e-15  Score=107.56  Aligned_cols=118  Identities=14%  Similarity=0.092  Sum_probs=87.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCe-EEEE-eCCCCC------------CchHHHHHhhhhccCCeEEEEcccCChHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHE-TYVL-QRPDIG------------LDIDKLQMLLSFKKQGAHLIEASFADHRS   68 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~-~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   68 (124)
                      +++++||||+|+||.++++.|+++|++ ++++ +|++..            ...+..+.+.. ...++.++.+|++|+++
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-LGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-HTCEEEEEECCTTSHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-cCCEEEEEECCCCCHHH
Confidence            578999999999999999999999987 5666 777422            11111222221 24568899999999999


Q ss_pred             HHHHhcc------cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC----ccEEEEecCCccc
Q 033236           69 LVEAVKR------VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN----VKKRKLNEGMIPF  121 (124)
Q Consensus        69 ~~~~~~~------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~----~~~~i~~ss~~~~  121 (124)
                      +.++++.      +|.||||||...              .+++|+.++.++.+.+.+...    ..+||++||...+
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            9999875      699999998542              245789999999999987641    4689988876544

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.59  E-value=2.5e-15  Score=100.44  Aligned_cols=112  Identities=16%  Similarity=0.076  Sum_probs=75.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH----hcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA----VKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~d~v   79 (124)
                      |+++||||+|+||+++++.|+++|++|++++|++...+.. .+ +.. ...++..+  |..+.+.+.+.    +.++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~-l~~-~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EA-FAE-TYPQLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-HH-HHH-HCTTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH-HHh-cCCcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            6799999999999999999999999999999986332211 11 211 12333333  44443322221    2268999


Q ss_pred             EEeCccc-c--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           80 ICTISGV-H--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~-~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      |||||.. .              .++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  136 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF  136 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccc
Confidence            9999854 1              13467788888887775    344 4799999987654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.55  E-value=7.6e-15  Score=108.95  Aligned_cols=118  Identities=12%  Similarity=0.098  Sum_probs=78.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-----CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-----LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   74 (124)
                      |++|+++||||+|+||+++++.|+++|++|++++|....     ...........+...... ..+|+++.+++.++++ 
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~   95 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIET   95 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHH
Confidence            457889999999999999999999999999999872210     001111111222222222 3479999998888876 


Q ss_pred             ------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                            ++|++|||||...              .++.|+.++.++++++.    +.+ ..+||++||...
T Consensus        96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~  164 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSG  164 (613)
T ss_dssp             ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHH
T ss_pred             HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHH
Confidence                  4899999999542              13568888888888874    344 469999998653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.55  E-value=1.3e-14  Score=96.46  Aligned_cols=110  Identities=12%  Similarity=0.071  Sum_probs=72.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEE-e--CCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHH-HHh---cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVL-Q--RPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLV-EAV---KR   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~---~~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |++    +...+..+.+  .+..+.  |..+.+.+. ++.   .+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~----~~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA----AERQRFESEN--PGTIAL--AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH----HHHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCH----HHHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999 5  876    1211112222  222222  443333222 222   25


Q ss_pred             cCEEEEeCccccc-----------------eecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           76 VDVVICTISGVHF-----------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 ~d~vi~~a~~~~~-----------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      +|++|||||....                 ++.|+.++.++++++.    +.+ ..++|++||...+
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  138 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGK  138 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhC
Confidence            8999999985322                 3467888888888775    344 5799999987644

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.51  E-value=3.1e-14  Score=98.48  Aligned_cols=114  Identities=18%  Similarity=0.142  Sum_probs=81.1

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCCCchHHH-HHhhhhccCCeEEEEcccCChHHHHH
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIGLDIDKL-QMLLSFKKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~   71 (124)
                      |. .|+++||||+|++|++++..|+++|+       +|+++++.+.   ..+. .....+.+..+.++ +|+.+.+++.+
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~---~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc---hhhccchhhhhhccccccc-CCeEeccChHH
Confidence            44 46899999999999999999999886       8999887641   0111 11111222222333 68877777888


Q ss_pred             HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhC-CccEEEEecCC
Q 033236           72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGM  118 (124)
Q Consensus        72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~  118 (124)
                      +++++|+|||+||...        +.+.|+.++.++++++.+.+ .-.++++.|+.
T Consensus        77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp  132 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNP  132 (327)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCc
Confidence            8999999999998542        34578999999999999884 32367776653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.46  E-value=9.4e-13  Score=106.20  Aligned_cols=120  Identities=13%  Similarity=0.070  Sum_probs=84.4

Q ss_pred             CCceEEEEccCCh-hcHHHHHHHhhCCCeEEEEe-CCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGY-IGRRIVKASLAQGHETYVLQ-RPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~-iG~~l~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++++++||||+++ ||.++++.|+++|++|++++ |+.........+......  ..++.++.+|++|++++.++++   
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999998 99999999999999999984 554111111111112222  3457899999999999988764   


Q ss_pred             ----------ccCEEEEeCccccc-----------------eecchHHHHHHHHHHHHhCC-----ccEEEEecCCccc
Q 033236           75 ----------RVDVVICTISGVHF-----------------RSHNILMQLKLVDAIREAGN-----VKKRKLNEGMIPF  121 (124)
Q Consensus        75 ----------~~d~vi~~a~~~~~-----------------~~~~~~~~~~~~~~~~~~~~-----~~~~i~~ss~~~~  121 (124)
                                ++|++|||||....                 +++|+.+...+++.+.....     ..+||++||...+
T Consensus       754 ~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~  832 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  832 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence                      48999999985321                 24577888888887743221     2589999986543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.45  E-value=3.6e-13  Score=106.55  Aligned_cols=119  Identities=13%  Similarity=0.074  Sum_probs=84.4

Q ss_pred             CCceEEEEccCCh-hcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGY-IGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~-iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++++++||||+|+ ||.++++.|+++|++|+++ .|++........+......  ..++.++.+|++|+++++++++   
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~  554 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  554 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            4678999999998 9999999999999999998 4554333222222212211  2357899999999999988764   


Q ss_pred             ----------ccCEEEEeCccccc-----------------eecchHHHHHHHHHHHHhC-----CccEEEEecCCcc
Q 033236           75 ----------RVDVVICTISGVHF-----------------RSHNILMQLKLVDAIREAG-----NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ----------~~d~vi~~a~~~~~-----------------~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ss~~~  120 (124)
                                ++|++|||||....                 ++.|+.+...+++.+....     ...+||++||...
T Consensus       555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                      48999999984311                 2457788888888873221     0258899987654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.42  E-value=3.8e-12  Score=77.61  Aligned_cols=99  Identities=19%  Similarity=0.295  Sum_probs=74.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      +++++|+|+ |.+|+.+++.|.+.|++|+++++++     ..   .+.........+.+|.++++.+.++ ++++|+|++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~-----~~---~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   76 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE-----EK---VNAYASYATHAVIANATEENELLSLGIRNFEYVIV   76 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH-----HH---HHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH-----HH---HHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence            467999997 9999999999999999999999976     22   2222233557788999999988887 788999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +++..      ......+++.+.+.+ +++++..++
T Consensus        77 ~~~~~------~~~~~~~~~~~~~~~-~~~ii~~~~  105 (144)
T 2hmt_A           77 AIGAN------IQASTLTTLLLKELD-IPNIWVKAQ  105 (144)
T ss_dssp             CCCSC------HHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred             CCCCc------hHHHHHHHHHHHHcC-CCeEEEEeC
Confidence            98731      122335666777777 567766554

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.42  E-value=1.1e-12  Score=105.59  Aligned_cols=120  Identities=12%  Similarity=0.036  Sum_probs=82.5

Q ss_pred             CCceEEEEccCCh-hcHHHHHHHhhCCCeEEEEe-CCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGY-IGRRIVKASLAQGHETYVLQ-RPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~-iG~~l~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++++++||||+|+ ||.++++.|++.|++|++++ |++........+....+.  ..++.++.+|++|++++.++++   
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999 99999999999999999986 444111111111112222  3457899999999999988864   


Q ss_pred             --------ccCEEEEeCccccc-----------------eecchHHHHHHHHHHH--Hh---CCccEEEEecCCccc
Q 033236           75 --------RVDVVICTISGVHF-----------------RSHNILMQLKLVDAIR--EA---GNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --------~~d~vi~~a~~~~~-----------------~~~~~~~~~~~~~~~~--~~---~~~~~~i~~ss~~~~  121 (124)
                              ++|+||||||....                 +..|+.++.++++.+.  ..   ....+||++||...+
T Consensus       731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                    48999999985321                 2356777777776632  21   002589999886543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.42  E-value=8.5e-13  Score=100.47  Aligned_cols=114  Identities=17%  Similarity=0.245  Sum_probs=86.2

Q ss_pred             CceEEEEccCChhcHHHHHHHh-hCCC-eEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL-AQGH-ETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      +++++|||++|++|+.++++|+ ++|+ +|++++|+....+ ...+....+  ...++.++.+|++|+++++++++.   
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~-~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAAS-GAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGST-THHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchH-HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            5789999999999999999999 7897 5888899842221 111222222  245688999999999999999864   


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                         +|.||||||...              .+++|+.|+.++.+++. .. . +||++||...
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~-l-~iV~~SS~ag  667 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PD-V-ALVLFSSVSG  667 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TT-S-EEEEEEETHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hC-C-EEEEEccHHh
Confidence               699999998642              24678999999999883 33 4 8888887653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.42  E-value=1.1e-13  Score=95.69  Aligned_cols=119  Identities=8%  Similarity=-0.000  Sum_probs=81.4

Q ss_pred             CceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCC---------CCCchHHHHHhh-hhccCCeEEEEcccCCh--H-
Q 033236            3 KSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPD---------IGLDIDKLQMLL-SFKKQGAHLIEASFADH--R-   67 (124)
Q Consensus         3 ~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~--~-   67 (124)
                      +|+++|||+++  +||.++++.|+++|++|++.+|++         ............ ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999777653         000000000000 00112367888999877  6 


Q ss_pred             -----------------HHHHHhc-------ccCEEEEeCccc----------------cceecchHHHHHHHHHHHHhC
Q 033236           68 -----------------SLVEAVK-------RVDVVICTISGV----------------HFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        68 -----------------~~~~~~~-------~~d~vi~~a~~~----------------~~~~~~~~~~~~~~~~~~~~~  107 (124)
                                       ++.++++       ++|++|||||..                ..++.|+.++..+.+++.+.-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6776664       489999999842                124578899999999987753


Q ss_pred             C-ccEEEEecCCccc
Q 033236          108 N-VKKRKLNEGMIPF  121 (124)
Q Consensus       108 ~-~~~~i~~ss~~~~  121 (124)
                      . -.++|++||...+
T Consensus       162 ~~~g~Iv~isS~~~~  176 (329)
T 3lt0_A          162 KPQSSIISLTYHASQ  176 (329)
T ss_dssp             EEEEEEEEEECGGGT
T ss_pred             hhCCeEEEEeCcccc
Confidence            0 1489999876543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.41  E-value=2.2e-13  Score=93.60  Aligned_cols=118  Identities=13%  Similarity=0.082  Sum_probs=75.2

Q ss_pred             CceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCC------CchHHHHHhhhhccC----CeEEEEcc--------
Q 033236            3 KSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIG------LDIDKLQMLLSFKKQ----GAHLIEAS--------   62 (124)
Q Consensus         3 ~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~----~~~~~~~D--------   62 (124)
                      +|+++||||  +|+||+++++.|+++|++|++++|++..      ......+....+...    ...++.+|        
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~   88 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPED   88 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTS
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccch
Confidence            578999999  8999999999999999999999875300      000000111111111    12444443        


Q ss_pred             ----cCC--------hHHHHHHhc-------ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHhC
Q 033236           63 ----FAD--------HRSLVEAVK-------RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        63 ----~~~--------~~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                          ++|        +++++++++       ++|++|||||...                .++.|+.++.++++++.+.-
T Consensus        89 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  168 (315)
T 2o2s_A           89 VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM  168 (315)
T ss_dssp             SCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred             hhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence                332        445555554       5899999998431                13568889999999987652


Q ss_pred             -CccEEEEecCCcc
Q 033236          108 -NVKKRKLNEGMIP  120 (124)
Q Consensus       108 -~~~~~i~~ss~~~  120 (124)
                       .-.++|++||...
T Consensus       169 ~~~g~Iv~isS~~~  182 (315)
T 2o2s_A          169 NEGGSAVTLSYLAA  182 (315)
T ss_dssp             EEEEEEEEEEEGGG
T ss_pred             hcCCEEEEEecccc
Confidence             0158998887653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.40  E-value=8e-13  Score=89.89  Aligned_cols=80  Identities=26%  Similarity=0.199  Sum_probs=64.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++++||||+|++|++++..|++.|++|++++|++.    ...+..+.+.. .++.++.+|+++++++.++++++|+||
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~----~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV  193 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD----KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF  193 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence            4678999999999999999999999999999999862    21122222211 246778899999999999999999999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      |++|.
T Consensus       194 n~ag~  198 (287)
T 1lu9_A          194 TAGAI  198 (287)
T ss_dssp             ECCCT
T ss_pred             ECCCc
Confidence            99973

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.39  E-value=1.8e-12  Score=96.20  Aligned_cols=116  Identities=12%  Similarity=0.030  Sum_probs=74.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-----CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-----LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+...     ......+..+.+...+-.. .+|++|.++++++++  
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHH
Confidence            45789999999999999999999999999998876410     0001111111221112222 357766654444432  


Q ss_pred             -----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 -----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                           ++|++|||||...              .+++|+.++..+.+++.+    .+ -.+||++||..
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~a  152 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPA  152 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHH
Confidence                 5999999999542              135678888777777654    44 36899999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.39  E-value=1.8e-12  Score=88.27  Aligned_cols=119  Identities=11%  Similarity=0.034  Sum_probs=75.2

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCC------chHHHHHhhhhccCC----eEEEEcc-------
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGL------DIDKLQMLLSFKKQG----AHLIEAS-------   62 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~~~~~----~~~~~~D-------   62 (124)
                      ++|+++||||+  |+||+++++.|+++|++|++++|++...      ...+.+....+....    ...+.+|       
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence            46789999999  9999999999999999999988642000      000001111111111    2333333       


Q ss_pred             -c----CC--------hHHHHHHhc-------ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh
Q 033236           63 -F----AD--------HRSLVEAVK-------RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREA  106 (124)
Q Consensus        63 -~----~~--------~~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~  106 (124)
                       +    +|        +++++++++       ++|++|||||...                .++.|+.++.++++++.+.
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             2    22        445555543       5899999997421                1356889999999999875


Q ss_pred             C-CccEEEEecCCcc
Q 033236          107 G-NVKKRKLNEGMIP  120 (124)
Q Consensus       107 ~-~~~~~i~~ss~~~  120 (124)
                      - ...++|++||...
T Consensus       167 m~~~g~iv~isS~~~  181 (297)
T 1d7o_A          167 MNPGGASISLTYIAS  181 (297)
T ss_dssp             EEEEEEEEEEECGGG
T ss_pred             hccCceEEEEecccc
Confidence            2 0258999987654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.39  E-value=2e-12  Score=95.91  Aligned_cols=113  Identities=11%  Similarity=0.102  Sum_probs=78.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc-CChHHHH-HH---hccc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF-ADHRSLV-EA---VKRV   76 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~-~~---~~~~   76 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|..  . +...+.+.. ....+..+.+|+ .+.+.+. .+   +.++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~-~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--A-TKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--C-HHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--H-HHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999987643  1 222222222 123466778888 5554332 22   2359


Q ss_pred             CEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           77 DVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      |++|||||...              .+++|+.++.++.+++.+    .+ -.+||++||..
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~a  456 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTS  456 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh
Confidence            99999999542              135678888887777754    33 36899999764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.35  E-value=2.8e-12  Score=88.23  Aligned_cols=118  Identities=12%  Similarity=0.089  Sum_probs=72.6

Q ss_pred             CceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCC-----------CCCchHH-H------HHhhhhccC-----CeE
Q 033236            3 KSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPD-----------IGLDIDK-L------QMLLSFKKQ-----GAH   57 (124)
Q Consensus         3 ~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~-----------~~~~~~~-~------~~~~~~~~~-----~~~   57 (124)
                      +|+++||||  +++||+++++.|+++|++|++++|++           ...+... .      +....+...     ...
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK   88 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence            468999998  89999999999999999999998642           0000000 0      000111111     124


Q ss_pred             EEEcc------------cCC--------hHHHHHHhc-------ccCEEEEeCcccc----------------ceecchH
Q 033236           58 LIEAS------------FAD--------HRSLVEAVK-------RVDVVICTISGVH----------------FRSHNIL   94 (124)
Q Consensus        58 ~~~~D------------~~~--------~~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~   94 (124)
                      ++.+|            ++|        +++++++++       ++|++|||||...                .++.|+.
T Consensus        89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  168 (319)
T 2ptg_A           89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY  168 (319)
T ss_dssp             EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred             cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence            44443            332        335555544       5899999998421                1356889


Q ss_pred             HHHHHHHHHHHhCC-ccEEEEecCCcc
Q 033236           95 MQLKLVDAIREAGN-VKKRKLNEGMIP  120 (124)
Q Consensus        95 ~~~~~~~~~~~~~~-~~~~i~~ss~~~  120 (124)
                      ++.++++++.+.-. -.+||++||...
T Consensus       169 g~~~l~~~~~~~m~~~g~Iv~isS~~~  195 (319)
T 2ptg_A          169 SFVSLLQHFLPLMKEGGSALALSYIAS  195 (319)
T ss_dssp             HHHHHHHHHGGGEEEEEEEEEEEECC-
T ss_pred             HHHHHHHHHHHHHhcCceEEEEecccc
Confidence            99999999977520 158998887653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.33  E-value=4.1e-11  Score=73.25  Aligned_cols=96  Identities=18%  Similarity=0.243  Sum_probs=71.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      +++++|+|+ |.+|+.+++.|.+.|++|+++++++     .   ..+.....++.++.+|.++++.+.++ .+++|+|+.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~-----~---~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK-----E---KIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH-----H---HHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH-----H---HHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence            468999997 9999999999999999999999987     2   22233345678999999999999887 567999998


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +.+.       ......++..+++.+ ..+++-.
T Consensus        77 ~~~~-------~~~n~~~~~~a~~~~-~~~iia~  102 (141)
T 3llv_A           77 TGSD-------DEFNLKILKALRSVS-DVYAIVR  102 (141)
T ss_dssp             CCSC-------HHHHHHHHHHHHHHC-CCCEEEE
T ss_pred             ecCC-------HHHHHHHHHHHHHhC-CceEEEE
Confidence            8762       223344556666666 4555443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.33  E-value=1.8e-11  Score=101.82  Aligned_cols=116  Identities=11%  Similarity=0.085  Sum_probs=86.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      +++++||||+|+||+++++.|+++|++ |++++|+....... .+....+  ...++.++.+|++|+++++++++     
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~-~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQ-ARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHH-HHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHH-HHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            578999999999999999999999986 77788886443211 1112222  23457788999999999988875     


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                       .+|.+|||||...              .+++|+.|+.++.+.+.+.. ...+||++||..
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~a 2023 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVS 2023 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchh
Confidence             4899999998542              24678999999988887652 146899998754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.32  E-value=1.3e-11  Score=87.86  Aligned_cols=83  Identities=17%  Similarity=0.112  Sum_probs=64.6

Q ss_pred             CceEEEEccCChhcHH--HHHHHhhCCCeEEEEeCCCCCCc----------hHHHHHhhhhccCCeEEEEcccCChHHHH
Q 033236            3 KSKVLVVGGTGYIGRR--IVKASLAQGHETYVLQRPDIGLD----------IDKLQMLLSFKKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~--l~~~l~~~g~~v~~~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   70 (124)
                      +|+++||||+++||.+  ++..++++|++|++++|+.....          ..............+..+.+|++++++++
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~  139 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD  139 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence            6789999999999999  99999999999999999864432          12222221223456889999999999988


Q ss_pred             HHhc-------ccCEEEEeCcc
Q 033236           71 EAVK-------RVDVVICTISG   85 (124)
Q Consensus        71 ~~~~-------~~d~vi~~a~~   85 (124)
                      ++++       ++|++|||||.
T Consensus       140 ~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          140 KVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCcc
Confidence            8875       38999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=99.32  E-value=1.9e-10  Score=71.22  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=65.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~v   79 (124)
                      |..++++|+|+ |.+|+.+++.|.+.|++|+++++++    +...+........++.++.+|.++++.+.++ ++++|+|
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~v   75 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence            67789999995 9999999999999999999999975    2322233322345689999999999999987 8899999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +.+.+
T Consensus        76 i~~~~   80 (153)
T 1id1_A           76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEecC
Confidence            99876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.31  E-value=1.5e-11  Score=86.92  Aligned_cols=82  Identities=18%  Similarity=0.131  Sum_probs=64.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCCCCchH----------H-HHHhhhhccCCeEEEEcccCChHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDID----------K-LQMLLSFKKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~----------~-~~~~~~~~~~~~~~~~~D~~~~~~~~   70 (124)
                      +|+++||||+++||.++++.|++ .|++|++++|+.......          . .+.... ....+..+.+|++|+++++
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHHHHH
Confidence            57899999999999999999999 999999998876443211          1 111211 2456788999999999988


Q ss_pred             HHhc-------ccCEEEEeCcc
Q 033236           71 EAVK-------RVDVVICTISG   85 (124)
Q Consensus        71 ~~~~-------~~d~vi~~a~~   85 (124)
                      ++++       ++|++|||||.
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEEcCcc
Confidence            8876       38999999985

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.30  E-value=4.8e-11  Score=84.77  Aligned_cols=97  Identities=16%  Similarity=0.186  Sum_probs=73.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhcc---CCeEEEEcccCChHHHHHHhcc--
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKK---QGAHLIEASFADHRSLVEAVKR--   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~--   75 (124)
                      ++++|+|+ |++|+.+++.|++.|   .+|.+.+|++    +...+....+..   .++..+.+|++|.+++.+++++  
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~----~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~   76 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTL----SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK   76 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCH----HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCH----HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence            68999998 999999999999988   3899999987    222222222222   3688999999999999999987  


Q ss_pred             cCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           76 VDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        76 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +|+|||++++..        ...++++|.+.+ + +++-+
T Consensus        77 ~DvVin~ag~~~--------~~~v~~a~l~~g-~-~vvD~  106 (405)
T 4ina_A           77 PQIVLNIALPYQ--------DLTIMEACLRTG-V-PYLDT  106 (405)
T ss_dssp             CSEEEECSCGGG--------HHHHHHHHHHHT-C-CEEES
T ss_pred             CCEEEECCCccc--------ChHHHHHHHHhC-C-CEEEe
Confidence            999999998532        246777787777 3 44433

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=99.28  E-value=8.5e-11  Score=84.53  Aligned_cols=100  Identities=23%  Similarity=0.287  Sum_probs=74.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++++++|+| +|++|+++++.|++.|++|++.+|++     .+.+.... ...++..+.+|+++.+++.++++++|+||
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~-----~~a~~la~-~~~~~~~~~~Dv~d~~~l~~~l~~~DvVI   73 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTL-----ESAKKLSA-GVQHSTPISLDVNDDAALDAEVAKHDLVI   73 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSH-----HHHHHTTT-TCTTEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCH-----HHHHHHHH-hcCCceEEEeecCCHHHHHHHHcCCcEEE
Confidence            7788999998 79999999999999999999999986     22222211 11247788999999999999999999999


Q ss_pred             EeCccccc--------------eec--chHHHHHHHHHHHHhC
Q 033236           81 CTISGVHF--------------RSH--NILMQLKLVDAIREAG  107 (124)
Q Consensus        81 ~~a~~~~~--------------~~~--~~~~~~~~~~~~~~~~  107 (124)
                      |+++....              ...  ......++.+++++.|
T Consensus        74 n~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           74 SLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             ECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             ECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            99985321              000  1235678888888888

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.27  E-value=3.1e-11  Score=85.83  Aligned_cols=82  Identities=16%  Similarity=0.133  Sum_probs=63.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCCCCchH-----------HHHHhhhhccCCeEEEEcccCChHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDID-----------KLQMLLSFKKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~-----------~~~~~~~~~~~~~~~~~~D~~~~~~~~   70 (124)
                      +|+++||||+++||+++++.|++ .|++|++++|+....+..           ..+.... ....+..+.+|++++++++
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHHHHH
Confidence            57899999999999999999999 999999999887543321           1122211 2456788999999998887


Q ss_pred             HHhc--------ccCEEEEeCcc
Q 033236           71 EAVK--------RVDVVICTISG   85 (124)
Q Consensus        71 ~~~~--------~~d~vi~~a~~   85 (124)
                      ++++        ++|++|||||.
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCCEEEEcCcc
Confidence            7764        37999999975

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.26  E-value=5.6e-11  Score=82.25  Aligned_cols=108  Identities=15%  Similarity=0.127  Sum_probs=76.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+++|+||+|++|..++..|++.|  .+|+++++++.  .....+ +.... .... +.+ +.+.+++.++++++|+||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~d-L~~~~-~~~~-v~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTAD-ISHMD-TGAV-VRG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHH-HHTSC-SSCE-EEE-EESHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHH-hhccc-ccce-EEE-EeCCCCHHHHcCCCCEEE
Confidence            4789999999999999999999988  78999988762  011111 11111 1111 122 334667889999999999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +++|...        +...|..+++++++++.+.+ .+.+++++|
T Consensus        82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            9998432        23567899999999999998 666666653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=99.26  E-value=1.9e-10  Score=80.60  Aligned_cols=95  Identities=24%  Similarity=0.317  Sum_probs=75.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|+|+|.|+ |++|+.+++.|.+ .++|.+.+++.     ...+..    ...+..+..|++|.+++.+++++.|+||++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~-----~~~~~~----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNN-----ENLEKV----KEFATPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCH-----HHHHHH----TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCH-----HHHHHH----hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            468999998 9999999998865 57999999986     222222    245678899999999999999999999999


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +++..        ...++++|.+.|  .+++-+|..
T Consensus        85 ~p~~~--------~~~v~~~~~~~g--~~yvD~s~~  110 (365)
T 3abi_A           85 LPGFL--------GFKSIKAAIKSK--VDMVDVSFM  110 (365)
T ss_dssp             CCGGG--------HHHHHHHHHHHT--CEEEECCCC
T ss_pred             cCCcc--------cchHHHHHHhcC--cceEeeecc
Confidence            98531        346889999998  477776643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.23  E-value=2.5e-11  Score=84.13  Aligned_cols=114  Identities=16%  Similarity=0.092  Sum_probs=77.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      .|+++|+||+|++|++++..|+..|.       +|.++++++.............+.+....+ ..|+...++..+++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence            47899999999999999999998885       788888871000011111111122211111 2466666778889999


Q ss_pred             cCEEEEeCcccc--------ceecchHHHHHHHHHHHHhC-CccEEEEecC
Q 033236           76 VDVVICTISGVH--------FRSHNILMQLKLVDAIREAG-NVKKRKLNEG  117 (124)
Q Consensus        76 ~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss  117 (124)
                      +|+|||++|...        +...|...++++++++.+.+ +-.+++++|.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            999999998442        23468889999999999983 3347888774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=99.22  E-value=3.3e-10  Score=68.66  Aligned_cols=99  Identities=16%  Similarity=0.233  Sum_probs=71.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      +|+++|+|+ |.+|+.+++.|.+.|++|++++|++     ...+....  ..++.++.+|..+++.+.++ ++++|+|+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~-----~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK-----DICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH-----HHHHHHHH--hcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence            578999986 9999999999999999999999976     22222211  23567888999999888765 678999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +.+..       .....+.+.+...+ ..+++..++
T Consensus        76 ~~~~~-------~~~~~~~~~~~~~~-~~~ii~~~~  103 (140)
T 1lss_A           76 VTGKE-------EVNLMSSLLAKSYG-INKTIARIS  103 (140)
T ss_dssp             CCSCH-------HHHHHHHHHHHHTT-CCCEEEECS
T ss_pred             eeCCc-------hHHHHHHHHHHHcC-CCEEEEEec
Confidence            98632       11234556666666 566765553

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=99.16  E-value=2.7e-09  Score=66.18  Aligned_cols=98  Identities=14%  Similarity=0.211  Sum_probs=71.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHH-hcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEA-VKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~-~~~~d~vi   80 (124)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|++        +..+.+. ..+...+.+|..+++.+.++ ++++|+||
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~--------~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNE--------YAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG--------GGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence            578999995 9999999999999999999999987        2223333 34567888999998888876 77899999


Q ss_pred             EeCccccceecchHHHHHHHHHHHH-hCCccEEEEecC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIRE-AGNVKKRKLNEG  117 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~ss  117 (124)
                      .+.+..       .....+++.+.. .+ ..+++...+
T Consensus        90 ~~~~~~-------~~~~~~~~~~~~~~~-~~~iv~~~~  119 (155)
T 2g1u_A           90 AFTNDD-------STNFFISMNARYMFN-VENVIARVY  119 (155)
T ss_dssp             ECSSCH-------HHHHHHHHHHHHTSC-CSEEEEECS
T ss_pred             EEeCCc-------HHHHHHHHHHHHHCC-CCeEEEEEC
Confidence            988731       223445555655 34 456655543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.16  E-value=7.1e-10  Score=80.07  Aligned_cols=77  Identities=23%  Similarity=0.299  Sum_probs=61.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++++|+|+ |++|++++..|++. |++|++.+|++     .+.+.+...  .++..+.+|+.+.+++.++++++|+||
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~-----~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVI   93 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL-----ANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVI   93 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSH-----HHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEE
Confidence            4578999997 99999999999998 68999999986     222222111  356778899999999999999999999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      |+++..
T Consensus        94 n~tp~~   99 (467)
T 2axq_A           94 SLIPYT   99 (467)
T ss_dssp             ECSCGG
T ss_pred             ECCchh
Confidence            999853

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.06  E-value=2.7e-09  Score=67.80  Aligned_cols=89  Identities=16%  Similarity=0.265  Sum_probs=67.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH--hcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA--VKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~v   79 (124)
                      +++++|+| .|.+|..+++.|.+. |++|+++++++     .+.+   .+...++.++.+|.++++.+.++  ++++|+|
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~-----~~~~---~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~v  109 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIRE-----EAAQ---QHRSEGRNVISGDATDPDFWERILDTGHVKLV  109 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCH-----HHHH---HHHHTTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCH-----HHHH---HHHHCCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence            56899998 599999999999999 99999999987     2222   22335677889999999998887  7889999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |.+.+.       ......++..+.+.+
T Consensus       110 i~~~~~-------~~~~~~~~~~~~~~~  130 (183)
T 3c85_A          110 LLAMPH-------HQGNQTALEQLQRRN  130 (183)
T ss_dssp             EECCSS-------HHHHHHHHHHHHHTT
T ss_pred             EEeCCC-------hHHHHHHHHHHHHHC
Confidence            998763       222334455555555

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=99.06  E-value=6.5e-09  Score=63.45  Aligned_cols=73  Identities=19%  Similarity=0.248  Sum_probs=61.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      .++++|.|. |.+|+.+++.|.+.|++|+++++++        +..+.+...++.++.+|.++++.+.++ .+++|.++.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~--------~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSR--------TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLIL   77 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence            457999995 9999999999999999999999997        233333346788999999999999886 678999998


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus        78 ~~~   80 (140)
T 3fwz_A           78 TIP   80 (140)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            876

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.05  E-value=1.5e-09  Score=91.26  Aligned_cols=85  Identities=12%  Similarity=0.065  Sum_probs=64.3

Q ss_pred             CCCceEEEEccCCh-hcHHHHHHHhhCCCeEEEEeCCCCCCchH-HHHHhhhhc--cCCeEEEEcccCChHHHHHHhc--
Q 033236            1 MGKSKVLVVGGTGY-IGRRIVKASLAQGHETYVLQRPDIGLDID-KLQMLLSFK--KQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~-iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      +++|+++||||+++ ||+++++.|+++|++|++.+|+....... ..+....+.  ...+..+.+|++|+++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            35788999999999 99999999999999999999986321111 112222222  2346789999999999888753  


Q ss_pred             ---------ccCEEEEeCcc
Q 033236           75 ---------RVDVVICTISG   85 (124)
Q Consensus        75 ---------~~d~vi~~a~~   85 (124)
                               ++|++|||||.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence                     37999999996

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.02  E-value=2.2e-09  Score=75.53  Aligned_cols=83  Identities=12%  Similarity=0.120  Sum_probs=63.3

Q ss_pred             CceEEEEccCChhcHHHHHHHh-hCCCeEEEEeCCCCCCch----------HHHHHhhhhccCCeEEEEcccCChHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL-AQGHETYVLQRPDIGLDI----------DKLQMLLSFKKQGAHLIEASFADHRSLVE   71 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~-~~g~~v~~~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   71 (124)
                      +|++||||+++++|.+.+..|+ ..|..++++.+...+...          ....+...........+.+|+++++.+++
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~  129 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ  129 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence            5789999999999999999998 679999998877643221          11111112235678899999999999998


Q ss_pred             Hhcc-------cCEEEEeCcc
Q 033236           72 AVKR-------VDVVICTISG   85 (124)
Q Consensus        72 ~~~~-------~d~vi~~a~~   85 (124)
                      +++.       +|++||+++.
T Consensus       130 vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          130 VIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEEeccc
Confidence            8863       8999999874

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.00  E-value=2.2e-10  Score=78.88  Aligned_cols=108  Identities=16%  Similarity=0.132  Sum_probs=69.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeC--CCCCCchHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQR--PDIGLDIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r--~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+++|+||+|++|++++..|+..|.  ++.++++  ++........+...  .+....+.+...    .+++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence            5899999999999999999998874  6777777  32000000111111  111122233221    123667799999


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +|||+||...        +...|..+++++++++.+.+  +++++++|
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence            9999998442        24578999999999999987  44555443

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.97  E-value=4.3e-09  Score=72.12  Aligned_cols=105  Identities=15%  Similarity=0.106  Sum_probs=69.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeC--CCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQR--PDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |+++|+||+|++|..++..|+..+.  ++.++++  ++...+....+...... ..++.+.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5899999999999999999988874  6777777  43111000111111111 12333333 2  2    456889999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||+++|...        +...|...++++++++.+.+ .+.+++++
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~  118 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTT  118 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEEC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe
Confidence            999998542        23567899999999999997 56676665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.94  E-value=5.2e-09  Score=68.82  Aligned_cols=75  Identities=13%  Similarity=0.220  Sum_probs=56.0

Q ss_pred             CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      |.+++++||||                +|++|.++++.|+++|++|++++++..-.           ...++.  ..|+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~-----------~~~g~~--~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------TPPFVK--RVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------CCTTEE--EEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc-----------cCCCCe--EEccC
Confidence            46789999999                69999999999999999999988765110           012333  46777


Q ss_pred             ChHHHHHH----hcccCEEEEeCccccc
Q 033236           65 DHRSLVEA----VKRVDVVICTISGVHF   88 (124)
Q Consensus        65 ~~~~~~~~----~~~~d~vi~~a~~~~~   88 (124)
                      +.+++.+.    +.++|++||+||...+
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence            77665554    3469999999996543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=5.8e-09  Score=68.81  Aligned_cols=77  Identities=21%  Similarity=0.325  Sum_probs=55.3

Q ss_pred             CCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC
Q 033236            2 GKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD   65 (124)
Q Consensus         2 ~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   65 (124)
                      .+|+++||||                +|++|.+++++++++|++|+++.|+.+..         .....++..+  |+..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~---------~~~~~~~~~~--~v~s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK---------PEPHPNLSIR--EITN   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC---------CCCCTTEEEE--ECCS
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCCCeEEE--EHhH
Confidence            4789999999                89999999999999999999999976211         0002345544  4445


Q ss_pred             hHHH----HHHhcccCEEEEeCccccce
Q 033236           66 HRSL----VEAVKRVDVVICTISGVHFR   89 (124)
Q Consensus        66 ~~~~----~~~~~~~d~vi~~a~~~~~~   89 (124)
                      .+++    .+.+.++|++|++|+...+.
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            4433    33455799999999976654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.92  E-value=2.4e-08  Score=65.12  Aligned_cols=73  Identities=21%  Similarity=0.313  Sum_probs=60.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      |+++|+|+ |.+|+.+++.|.+.|++|+++++++     ...+.+.  ...+..++.+|.++++.+.++ ++++|+++.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~-----~~~~~l~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR-----ELCEEFA--KKLKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH-----HHHHHHH--HHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH-----HHHHHHH--HHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            57999996 9999999999999999999999987     2222221  124678999999999999987 7889999988


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            76

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.87  E-value=3.3e-08  Score=65.09  Aligned_cols=92  Identities=12%  Similarity=0.108  Sum_probs=68.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      .++++|.|+ |.+|+.+++.|.+.|+ |+++++++     .   ..+... .++.++.+|.++++.+.++ ++++|.|+.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~-----~---~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDEN-----V---RKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIV   77 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG-----G---HHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH-----H---HHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence            468999996 9999999999999999 99998886     2   222223 5688999999999999988 889999998


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCcc-EEE
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVK-KRK  113 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i  113 (124)
                      +.+.       -.....++..+++.+ .+ +++
T Consensus        78 ~~~~-------d~~n~~~~~~a~~~~-~~~~ii  102 (234)
T 2aef_A           78 DLES-------DSETIHCILGIRKID-ESVRII  102 (234)
T ss_dssp             CCSC-------HHHHHHHHHHHHHHC-SSSEEE
T ss_pred             cCCC-------cHHHHHHHHHHHHHC-CCCeEE
Confidence            7763       122344556666666 33 444

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.85  E-value=5.3e-09  Score=67.11  Aligned_cols=73  Identities=25%  Similarity=0.285  Sum_probs=51.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHH---Hhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVE---AVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~--~~d   77 (124)
                      +++++|+||+|++|..+++.+...|++|++++|++     .+.+....   .+... ..|..+.+..+.   ...  ++|
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~-----~~~~~~~~---~g~~~-~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD-----AKREMLSR---LGVEY-VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHT---TCCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---cCCCE-EeeCCcHHHHHHHHHHhCCCCCe
Confidence            57899999999999999999999999999999876     22222222   22222 246666543333   332  489


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++++++|
T Consensus       110 ~vi~~~g  116 (198)
T 1pqw_A          110 VVLNSLA  116 (198)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999997

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.81  E-value=1e-07  Score=65.58  Aligned_cols=107  Identities=14%  Similarity=0.044  Sum_probs=71.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |++.|+||+|++|..++..|+..|  .++.++++++  ......+........++....    ..++++++++++|+||+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVvi   74 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVVI   74 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEEE
Confidence            589999999999999999999888  7899999986  111111211111010111111    12467888999999999


Q ss_pred             eCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++|...        ....|...++.+++.+.+..+-.+++++|
T Consensus        75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            997442        12356677888999988877323666655

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.73  E-value=1.3e-07  Score=67.41  Aligned_cols=89  Identities=20%  Similarity=0.288  Sum_probs=71.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      .++++|.|. |.+|+.+++.|.+.|++|+++++++        +..+.....++.++.+|.++++.+.++ ++++|+||.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~--------~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDP--------DHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCH--------HHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence            467999995 9999999999999999999999997        333333345778999999999999998 788999998


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.       ......++..+++.+
T Consensus        75 ~~~~-------~~~n~~i~~~ar~~~   93 (413)
T 3l9w_A           75 AIDD-------PQTNLQLTEMVKEHF   93 (413)
T ss_dssp             CCSS-------HHHHHHHHHHHHHHC
T ss_pred             CCCC-------hHHHHHHHHHHHHhC
Confidence            8762       334556677777766

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.65  E-value=1.4e-07  Score=66.21  Aligned_cols=74  Identities=22%  Similarity=0.349  Sum_probs=57.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++++|+|+ |.+|..+++.+...|++|++++|++     .+.+.........   +.+|.++.+++.++++++|+||++
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~-----~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~  236 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH-----KRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGA  236 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEEC
Confidence            578999998 9999999999999999999999986     2222222211122   456778888999999999999999


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      ++.
T Consensus       237 ~g~  239 (369)
T 2eez_A          237 VLV  239 (369)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            974

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.65  E-value=4.2e-08  Score=68.05  Aligned_cols=110  Identities=17%  Similarity=0.070  Sum_probs=71.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--e-----EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--E-----TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~-----v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      .+++.|+||+|++|++++..|+..+.  +     +.++++++..  .........+.+....+. .++...++..+.+++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~--~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMM--GVLDGVLMELQDCALPLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGH--HHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCcc--ccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCC
Confidence            57899999999999999999988763  4     8888876410  011111111111111111 123223456677889


Q ss_pred             cCEEEEeCccc--------cceecchHHHHHHHHHHHHhCCcc--EEEEec
Q 033236           76 VDVVICTISGV--------HFRSHNILMQLKLVDAIREAGNVK--KRKLNE  116 (124)
Q Consensus        76 ~d~vi~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~s  116 (124)
                      +|+||+++|..        ..++.|...++++++++.+.+ .+  +++.+|
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvs  129 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVG  129 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcC
Confidence            99999999743        234578899999999999998 44  466655

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.62  E-value=3.5e-07  Score=62.96  Aligned_cols=81  Identities=15%  Similarity=0.146  Sum_probs=57.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++++|+|+ |++|++++..|.+.|. +|+++.|+++.. +...+..+.+. .....+...++.+.+++.+.+.++|+|
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~-~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFY-ANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTH-HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchH-HHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence            4678999997 8999999999999997 899999984211 12222222221 123344455677778888888899999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ||+.+
T Consensus       231 INaTp  235 (315)
T 3tnl_A          231 TNATG  235 (315)
T ss_dssp             EECSS
T ss_pred             EECcc
Confidence            99864

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=98.60  E-value=2.1e-07  Score=64.34  Aligned_cols=86  Identities=13%  Similarity=0.122  Sum_probs=66.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      ++++|.|. |.+|+.+++.|.+.|+ |+++++++        +..+ ....++.++.+|.++++.+.++ ++++|.++.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~--------~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~  184 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN--------VRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVD  184 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGG--------GHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCCh--------hhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence            47999995 9999999999999999 99998887        2222 2346789999999999999998 8899999987


Q ss_pred             CccccceecchHHHHHHHHHHHHhC
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+.       ......++..+++.+
T Consensus       185 ~~~-------d~~n~~~~~~ar~~~  202 (336)
T 1lnq_A          185 LES-------DSETIHCILGIRKID  202 (336)
T ss_dssp             CSS-------HHHHHHHHHHHHTTC
T ss_pred             CCc-------cHHHHHHHHHHHHHC
Confidence            752       123344555666665

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.58  E-value=1.3e-07  Score=68.20  Aligned_cols=74  Identities=16%  Similarity=0.394  Sum_probs=60.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      .|+++|.|+ |.+|+.+++.|.++|++|+++++++     ...+.+.  ....+..+.+|.++++.+.++ ++++|.++-
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~-----~~~~~~~--~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDG-----DRLRELQ--DKYDLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCH-----HHHHHHH--HHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH-----HHHHHHH--HhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            589999996 9999999999999999999999987     2222221  134678999999999999998 678999887


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus        75 ~t~   77 (461)
T 4g65_A           75 VTN   77 (461)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.53  E-value=1.5e-07  Score=65.45  Aligned_cols=109  Identities=13%  Similarity=0.147  Sum_probs=69.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |.++++.|+|++|++|..++..++..|  .+|.+++++.........+.... ....     .++.-..+..++++++|+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~~~~-----~~i~~t~d~~~al~dADv   79 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-GFEG-----LNLTFTSDIKEALTDAKY   79 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-CCTT-----CCCEEESCHHHHHTTEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-cCCC-----CceEEcCCHHHHhCCCCE
Confidence            567899999999999999999999888  58999998751111111111111 1110     112112356677889999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccE--EEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKK--RKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--~i~~s  116 (124)
                      ||.++|..+        ....|....+.+++.+.+.. .+-  ++.+|
T Consensus        80 VvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvs  126 (343)
T 3fi9_A           80 IVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIF  126 (343)
T ss_dssp             EEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECS
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEec
Confidence            999998432        23467777888889998887 343  44444

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=2.4e-07  Score=64.52  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=51.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH---HHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS---LVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~d   77 (124)
                      +++++|+|++|++|..+++.+...|++|+++++++     .+.+....+   +.. ...|..+.+.   +.+...  ++|
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~---ga~-~~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTE-----EGQKIVLQN---GAH-EVFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCS-EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh-----hHHHHHHHc---CCC-EEEeCCCchHHHHHHHHcCCCCcE
Confidence            56899999999999999999999999999999886     333333322   222 1245555443   333333  599


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++|+++|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.52  E-value=2.2e-07  Score=63.88  Aligned_cols=73  Identities=16%  Similarity=0.126  Sum_probs=51.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHH---Hhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVE---AVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~--~~d   77 (124)
                      +++++|+||+|++|..+++.+...|++|+++++++     .+.+....+.   .. ...|..+.+..+.   ...  ++|
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~-----~~~~~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA-----QKAQSALKAG---AW-QVINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHHHT---CS-EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHcC---CC-EEEECCCccHHHHHHHHhCCCCce
Confidence            57899999999999999999999999999999875     3333333322   11 1236655543333   332  589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++|+++|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.49  E-value=3.6e-07  Score=63.42  Aligned_cols=74  Identities=22%  Similarity=0.267  Sum_probs=51.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   77 (124)
                      +++++|+|++|++|..+++.+...|++|++++|++     .+.+....+   +.. ...|+++.+++.+.++     ++|
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~-----~~~~~~~~~---g~~-~~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE-----GKEELFRSI---GGE-VFIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST-----THHHHHHHT---TCC-EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH-----HHHHHHHHc---CCc-eEEecCccHhHHHHHHHHhCCCCC
Confidence            57899999999999999999999999999999886     222223222   222 2237664433433332     589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++|+++|.
T Consensus       241 ~vi~~~g~  248 (347)
T 2hcy_A          241 GVINVSVS  248 (347)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCc
Confidence            99999983

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.48  E-value=2.9e-07  Score=63.45  Aligned_cols=73  Identities=21%  Similarity=0.270  Sum_probs=51.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh----c-ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV----K-RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~-~~d   77 (124)
                      +++++|+|++|++|..+++.+...|++|+++++++     .+.+....+   +.. ...|.++.+++.+.+    . ++|
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~-----~~~~~~~~~---g~~-~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD-----EKIAYLKQI---GFD-AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhc---CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence            57899999999999999999999999999999875     333333222   222 234666633333322    2 589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++|+++|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.47  E-value=3.1e-07  Score=61.91  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=48.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|+|+ |++|++++..|++.|++|++..|++    +...+..+.+.... .+...|.   +++.+  .++|+||+
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~----~~~~~la~~~~~~~-~~~~~~~---~~~~~--~~~DivVn  186 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV----SRAEELAKLFAHTG-SIQALSM---DELEG--HEFDLIIN  186 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH----HHHHHHHHHTGGGS-SEEECCS---GGGTT--CCCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH----HHHHHHHHHhhccC-CeeEecH---HHhcc--CCCCEEEE
Confidence            4678999997 8899999999999999999999986    22222222222111 1212332   33322  57999999


Q ss_pred             eCccc
Q 033236           82 TISGV   86 (124)
Q Consensus        82 ~a~~~   86 (124)
                      +++..
T Consensus       187 ~t~~~  191 (271)
T 1nyt_A          187 ATSSG  191 (271)
T ss_dssp             CCSCG
T ss_pred             CCCCC
Confidence            98743

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.47  E-value=5.8e-07  Score=62.56  Aligned_cols=74  Identities=20%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +++++|+||+|++|..+++.+...|++|+++++++     .+.+....+.   .. ...|..+.+   .+.+...  ++|
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ-----KKLQMAEKLG---AA-AGFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHT---CS-EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHcC---Cc-EEEecCChHHHHHHHHHhcCCCce
Confidence            56899999999999999999999999999999886     3333333322   21 224555543   3333333  589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++|+++|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999984

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.47  E-value=3.1e-07  Score=59.42  Aligned_cols=74  Identities=26%  Similarity=0.328  Sum_probs=49.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |++.|+||+|.+|+.+++.|.+.|++|++.+|++     .+.+.........+.  ..|+. .+++.++++++|+|+++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~-----~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE-----EKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH-----HHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence            4799999899999999999999999999999986     211111110000000  01222 234556677899999998


Q ss_pred             cc
Q 033236           84 SG   85 (124)
Q Consensus        84 ~~   85 (124)
                      ++
T Consensus        73 ~~   74 (212)
T 1jay_A           73 PW   74 (212)
T ss_dssp             CH
T ss_pred             Ch
Confidence            74

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.43  E-value=4.1e-07  Score=63.32  Aligned_cols=73  Identities=19%  Similarity=0.229  Sum_probs=50.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH---HHHHhc-ccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS---LVEAVK-RVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~-~~d~   78 (124)
                      ++++|+|++|++|..+++.+...|+ +|+++++++     .+.+....  ..+.. ...|..+.+.   +.+... ++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~-----~~~~~~~~--~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH-----EKCILLTS--ELGFD-AAINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHH--TSCCS-EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH-----HHHHHHHH--HcCCc-eEEecCchHHHHHHHHhcCCCCCE
Confidence            7899999999999999999999998 999999875     33333322  11222 2246655433   333322 5999


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      +|+++|
T Consensus       234 vi~~~G  239 (357)
T 2zb4_A          234 YFDNVG  239 (357)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.40  E-value=1e-06  Score=60.76  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=52.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +++++|+||+|++|..+++.+...|++|++++|++     .+.+....+.   .. ...|.++.+   .+.+...  ++|
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~-----~~~~~~~~~g---~~-~~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE-----EKAETARKLG---CH-HTINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHT---CS-EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHcC---CC-EEEECCCHHHHHHHHHHhCCCCCe
Confidence            56899999999999999999999999999999986     3333333322   11 123555544   3333332  589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++|+++|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.37  E-value=5.5e-06  Score=55.19  Aligned_cols=96  Identities=17%  Similarity=0.164  Sum_probs=63.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +++++|.|+ |++|..+++.|++.|. ++++++++.-+                  ..+...+.+.... .-.++.+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            468999995 9999999999999995 88988887511                  1111112222221 1235555665


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ++ ++.+.++++++|+||.+.+.       ...-..+.+.+.+.+
T Consensus       110 ~~-~~~~~~~~~~~DvVi~~~d~-------~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          110 LD-DAELAALIAEHDLVLDCTDN-------VAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CC-HHHHHHHHHTSSEEEECCSS-------HHHHHHHHHHHHHHT
T ss_pred             CC-HhHHHHHHhCCCEEEEeCCC-------HHHHHHHHHHHHHcC
Confidence            64 45677888899999998752       233455667777776

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.36  E-value=4e-06  Score=58.28  Aligned_cols=93  Identities=19%  Similarity=0.217  Sum_probs=56.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |++++.|.||+|.+|+.+++.|.+++   .+++.+. ++..+.      .. .+....+.+.  |. +++    .++++|
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~------~~-~~~g~~i~~~--~~-~~~----~~~~~D   70 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ------RM-GFAESSLRVG--DV-DSF----DFSSVG   70 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC------EE-EETTEEEECE--EG-GGC----CGGGCS
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC------cc-ccCCcceEEe--cC-CHH----HhcCCC
Confidence            34789999999999999999998654   3555553 332110      00 0111111221  22 122    256899


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +||.+.|        .......++.+.+.| ++ +|.+|+.
T Consensus        71 vV~~a~g--------~~~s~~~a~~~~~aG-~k-vId~Sa~  101 (340)
T 2hjs_A           71 LAFFAAA--------AEVSRAHAERARAAG-CS-VIDLSGA  101 (340)
T ss_dssp             EEEECSC--------HHHHHHHHHHHHHTT-CE-EEETTCT
T ss_pred             EEEEcCC--------cHHHHHHHHHHHHCC-CE-EEEeCCC
Confidence            9999988        233567788888888 54 6666643

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=98.35  E-value=2.3e-06  Score=58.21  Aligned_cols=76  Identities=13%  Similarity=0.227  Sum_probs=48.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEE--------EcccCChHHHHHH
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI--------EASFADHRSLVEA   72 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~D~~~~~~~~~~   72 (124)
                      |++|++.|.|+ |.+|..++..|.+.|++|++++|++     .+.+.+..   .++...        ..+..+.+++.++
T Consensus         1 ~~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~-----~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (316)
T 2ew2_A            1 SNAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP-----AHIEAIRK---NGLIADFNGEEVVANLPIFSPEEIDHQ   71 (316)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHH---HCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH-----HHHHHHHh---CCEEEEeCCCeeEecceeecchhhccc
Confidence            45679999995 9999999999999999999999986     22222211   122221        1222233334344


Q ss_pred             hcccCEEEEeCcc
Q 033236           73 VKRVDVVICTISG   85 (124)
Q Consensus        73 ~~~~d~vi~~a~~   85 (124)
                      ++++|+||.+..+
T Consensus        72 ~~~~d~vi~~v~~   84 (316)
T 2ew2_A           72 NEQVDLIIALTKA   84 (316)
T ss_dssp             SCCCSEEEECSCH
T ss_pred             CCCCCEEEEEecc
Confidence            5589999998863

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.34  E-value=1.4e-06  Score=60.93  Aligned_cols=99  Identities=14%  Similarity=0.091  Sum_probs=59.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-----C-eEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-----H-ETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-----~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~   73 (124)
                      |+++++.|.||+|++|+.+++.|.+++     + +++.+.+..+.... .....+.+.. ..+.+.  |. +++    .+
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~-~~~~~~~l~~~~~~~~~--~~-~~~----~~   78 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST-LGEHHPHLTPLAHRVVE--PT-EAA----VL   78 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB-GGGTCTTCGGGTTCBCE--EC-CHH----HH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc-hhhhcccccccceeeec--cC-CHH----Hh
Confidence            545789999999999999999999877     3 67666533211000 0000011111 122222  22 232    24


Q ss_pred             cccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           74 KRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        74 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      +++|+||.+.|...        ..++++.+ +.| + ++|-.|+.
T Consensus        79 ~~~DvVf~alg~~~--------s~~~~~~~-~~G-~-~vIDlSa~  112 (352)
T 2nqt_A           79 GGHDAVFLALPHGH--------SAVLAQQL-SPE-T-LIIDCGAD  112 (352)
T ss_dssp             TTCSEEEECCTTSC--------CHHHHHHS-CTT-S-EEEECSST
T ss_pred             cCCCEEEECCCCcc--------hHHHHHHH-hCC-C-EEEEECCC
Confidence            58999999988432        45677777 777 3 67777644

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.34  E-value=2.3e-06  Score=61.56  Aligned_cols=110  Identities=17%  Similarity=0.186  Sum_probs=64.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc----CCeE-EE-----EcccCChHHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK----QGAH-LI-----EASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~----~~~~-~~-----~~D~~~~~~~~~~   72 (124)
                      .|+|.|.|+ |++|..++..|++.|++|++++|++     .+.+.+..-..    ++++ .+     ...+.-..++.++
T Consensus         2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~-----~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea   75 (450)
T 3gg2_A            2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDR-----NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA   75 (450)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCH-----HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHH
Confidence            378999985 9999999999999999999999987     22222221000    0000 00     0111112345667


Q ss_pred             hcccCEEEEeCccc--cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           73 VKRVDVVICTISGV--HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        73 ~~~~d~vi~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ++++|+||.+.+..  ....++......+++.+.+.-+...+|...|+
T Consensus        76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST  123 (450)
T 3gg2_A           76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST  123 (450)
T ss_dssp             GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence            78899999988643  12234555566666666554212344443333

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=98.34  E-value=4e-06  Score=58.54  Aligned_cols=101  Identities=21%  Similarity=0.203  Sum_probs=58.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc-------cCCeEEEEcccCChHHHHHHh
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK-------KQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      |++++.|.||+|.+|+.+++.|.+.+ .+++.+.++++.......+....+.       ...+.+...   +++   ++.
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~   80 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HEE   80 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SGG
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HHh
Confidence            34689999999999999999998775 6887776543211011101000000       011111111   222   233


Q ss_pred             c-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           74 K-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        74 ~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      + ++|+|+.+.+.        ......++.+.+.| + ++|-.|+.
T Consensus        81 ~~~~DvV~~atp~--------~~~~~~a~~~~~aG-~-~VId~s~~  116 (354)
T 1ys4_A           81 FEDVDIVFSALPS--------DLAKKFEPEFAKEG-K-LIFSNASA  116 (354)
T ss_dssp             GTTCCEEEECCCH--------HHHHHHHHHHHHTT-C-EEEECCST
T ss_pred             cCCCCEEEECCCc--------hHHHHHHHHHHHCC-C-EEEECCch
Confidence            5 89999999872        33556777777788 3 57666654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.33  E-value=6e-06  Score=57.06  Aligned_cols=108  Identities=16%  Similarity=0.155  Sum_probs=68.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhh--hccCCeEEEE-cccCChHHHHHHhccc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIE-ASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~-~D~~~~~~~~~~~~~~   76 (124)
                      |+++++.|+|+ |.+|..++..|+..|. +|.++++++...+....+....  .......+.. .|      . ++++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~a   76 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGA   76 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCC
Confidence            66789999997 9999999999999998 9999999873221111121111  1112222221 22      2 578899


Q ss_pred             CEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           77 DVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        77 d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+||.++|..+        ....|..-.+.+++.+.+..+-..++.+|
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999987432        12446677788888888876322444444

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.33  E-value=1.2e-06  Score=60.41  Aligned_cols=73  Identities=15%  Similarity=0.210  Sum_probs=50.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHh-hhhccCCeEEEEcccCChHHHHHHh----cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQML-LSFKKQGAHLIEASFADHRSLVEAV----KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~----~~~d   77 (124)
                      +++++|+|++|++|...++.+...|++|+++++++     .+.+.. ..   .+... ..|..+.+..+.+.    .++|
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA-----EKCRFLVEE---LGFDG-AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHH---cCCCE-EEECCCHHHHHHHHHhcCCCce
Confidence            57899999999999999999999999999999886     333333 22   22221 23555544333332    2589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++++++|
T Consensus       221 ~vi~~~g  227 (336)
T 4b7c_A          221 VFFDNVG  227 (336)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.33  E-value=7.6e-07  Score=61.61  Aligned_cols=74  Identities=15%  Similarity=0.236  Sum_probs=50.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh----HHHHHHh-cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH----RSLVEAV-KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~-~~~d   77 (124)
                      +++++|+|++|++|..+++.+...|++|+++++++     .+.+....  ..+... ..|..+.    +.+.++. .++|
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~-----~~~~~~~~--~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d  227 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK-----EKVDLLKT--KFGFDD-AFNYKEESDLTAALKRCFPNGID  227 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHH--TSCCSE-EEETTSCSCSHHHHHHHCTTCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH--HcCCce-EEecCCHHHHHHHHHHHhCCCCc
Confidence            57899999999999999999999999999999876     33333321  112221 2355543    2333332 2589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++++++|
T Consensus       228 ~vi~~~g  234 (345)
T 2j3h_A          228 IYFENVG  234 (345)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999988

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.30  E-value=4.6e-06  Score=57.33  Aligned_cols=81  Identities=15%  Similarity=0.211  Sum_probs=53.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++++|+|+ |+.|++++..|.+.|. +|++..|+++.. +...+..+.+. ..+..+...+..+.+.+.+.+.++|+|
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~-~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFF-EKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHH-HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchH-HHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            3678999996 9999999999999996 899999984211 11122222221 123334444555554556667789999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ||+.+
T Consensus       225 INaTp  229 (312)
T 3t4e_A          225 TNGTK  229 (312)
T ss_dssp             EECSS
T ss_pred             EECCc
Confidence            99864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.29  E-value=4.1e-06  Score=57.16  Aligned_cols=74  Identities=16%  Similarity=0.169  Sum_probs=51.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |++|++++..|.+.|. +|++..|++    +...+..+.+... ..    +..+.+++.+.+.++|+||
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~----~ka~~la~~~~~~-~~----~~~~~~~~~~~~~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTV----EKAERLVREGDER-RS----AYFSLAEAETRLAEYDIII  209 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSH----HHHHHHHHHSCSS-SC----CEECHHHHHHTGGGCSEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHhhhc-cC----ceeeHHHHHhhhccCCEEE
Confidence            4678999997 8899999999999997 999999986    2222222222211 10    1223356777888999999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      ++.+.
T Consensus       210 n~t~~  214 (297)
T 2egg_A          210 NTTSV  214 (297)
T ss_dssp             ECSCT
T ss_pred             ECCCC
Confidence            99863

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=98.29  E-value=3.2e-06  Score=54.99  Aligned_cols=66  Identities=20%  Similarity=0.265  Sum_probs=48.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|++.|+| +|.+|+.+++.|.+.|++|++.+|++     .+   .+.+...++...        ++.++++++|+|+.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~-----~~---~~~~~~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP-----KR---TARLFPSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH-----HH---HHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH-----HH---HHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence            46899999 79999999999999999999999986     22   222222344332        345567789999998


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      .++
T Consensus        91 v~~   93 (215)
T 2vns_A           91 VFR   93 (215)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            875

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.28  E-value=6.2e-06  Score=57.03  Aligned_cols=106  Identities=19%  Similarity=0.202  Sum_probs=67.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++.|+|+ |.+|..++..|+..|.  ++.++++++...+....+....  +...++.+...|       .++++++|+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDv   76 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADI   76 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCE
Confidence            468999996 9999999999999885  8999998751111111112211  111344444333       246789999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||.++|...        ....|....+.+++.+.+..+-..++.+|
T Consensus        77 Vvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           77 VCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            999998432        13456677788888888876322344443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.27  E-value=1.9e-06  Score=60.22  Aligned_cols=74  Identities=24%  Similarity=0.274  Sum_probs=50.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHh-cccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAV-KRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~d~   78 (124)
                      +.+++|+||+|.+|...++.+...|++|+++++++     .+.+....+   +...+ .|..+.+   .+.+.. .++|+
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~-----~~~~~~~~~---Ga~~~-~~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD-----EKSAFLKSL---GCDRP-INYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHHc---CCcEE-EecCChhHHHHHHHhcCCCCCE
Confidence            56899999999999999999998999999999875     333333332   22221 2443332   233322 25899


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      +++++|.
T Consensus       235 vid~~g~  241 (362)
T 2c0c_A          235 VYESVGG  241 (362)
T ss_dssp             EEECSCT
T ss_pred             EEECCCH
Confidence            9999983

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.26  E-value=8.8e-07  Score=61.99  Aligned_cols=74  Identities=20%  Similarity=0.385  Sum_probs=53.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++++|+|+ |.+|+.+++.+...|.+|++++|++     .+.+.........+..   +..+.+++.+.+.++|+||++
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~-----~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV-----ERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGA  237 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH-----HHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEEC
Confidence            468999998 9999999999999999999999986     3333332221222222   223556777778899999999


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      ++.
T Consensus       238 ~~~  240 (361)
T 1pjc_A          238 VLV  240 (361)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.26  E-value=2.1e-06  Score=59.19  Aligned_cols=74  Identities=18%  Similarity=0.277  Sum_probs=51.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +++++|+||+|.+|...++.+...|.+|+++++++     .+.+....+   +... ..|..+.+   .+.+...  ++|
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~---ga~~-~~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD-----EKLKIAKEY---GAEY-LINASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHc---CCcE-EEeCCCchHHHHHHHHhCCCCce
Confidence            56899999999999999999999999999999976     333333332   2221 23444433   3444432  589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++++++|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.25  E-value=2.4e-06  Score=58.01  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=51.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++++|+|+ |++|++++..|.+.|. +|+++.|+.    +...+..+.+.  ...+.+...+.   +++.+.++++|+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~----~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~Di  197 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT----SRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADG  197 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSH----HHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCH----HHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCE
Confidence            4678999997 8999999999999997 799999987    22222222222  12233333333   445667778999


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      |||+.+
T Consensus       198 VInaTp  203 (283)
T 3jyo_A          198 VVNATP  203 (283)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.25  E-value=9.6e-07  Score=53.87  Aligned_cols=71  Identities=18%  Similarity=0.165  Sum_probs=49.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++++|+|+ |.+|+.+++.|.+.|++|++.+|++    +...+..+.+.   ....     ..+++.++++++|+||.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~----~~~~~~a~~~~---~~~~-----~~~~~~~~~~~~Divi~a   87 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI----DHVRAFAEKYE---YEYV-----LINDIDSLIKNNDVIITA   87 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH----HHHHHHHHHHT---CEEE-----ECSCHHHHHHTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH----HHHHHHHHHhC---CceE-----eecCHHHHhcCCCEEEEe
Confidence            578999995 9999999999999998888889986    22222222221   2222     223455667789999998


Q ss_pred             Cccc
Q 033236           83 ISGV   86 (124)
Q Consensus        83 a~~~   86 (124)
                      .+..
T Consensus        88 t~~~   91 (144)
T 3oj0_A           88 TSSK   91 (144)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            8743

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=98.24  E-value=1.6e-05  Score=55.62  Aligned_cols=71  Identities=17%  Similarity=0.269  Sum_probs=46.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+|+|.|+| .|.+|..++..|.+.|++|++.+|++     .+.+   .+...++..    ..+.+++.+-.+.+|+||.
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~-----~~~~---~l~~~g~~~----~~s~~e~~~~a~~~DvVi~   87 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNV-----NAVQ---ALEREGIAG----ARSIEEFCAKLVKPRVVWL   87 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH-----HHHH---HHHTTTCBC----CSSHHHHHHHSCSSCEEEE
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCH-----HHHH---HHHHCCCEE----eCCHHHHHhcCCCCCEEEE
Confidence            357899998 59999999999999999999999987     2222   222222211    2233333333333488888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus        88 ~vp~   91 (358)
T 4e21_A           88 MVPA   91 (358)
T ss_dssp             CSCG
T ss_pred             eCCH
Confidence            7763

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.23  E-value=1.7e-05  Score=54.69  Aligned_cols=109  Identities=17%  Similarity=0.185  Sum_probs=69.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |.++++.|+|+ |.+|..++..|+..|. ++.++++++...+....+....  .......+...+  +.    ++++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCCCC
Confidence            66789999995 9999999999999887 9999999873221111121111  111223332211  22    5788999


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +||.++|..+        ....|..-.+.+++.+.+..+-..++.+|
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999987432        12456777788888888876322444444

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.23  E-value=3.1e-06  Score=57.28  Aligned_cols=36  Identities=22%  Similarity=0.321  Sum_probs=32.1

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      || .+++.|.|+ |.+|..++..|++.|++|++.+|++
T Consensus         1 Mm~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (283)
T 4e12_A            1 MTGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINT   37 (283)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            44 468999985 9999999999999999999999987

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.23  E-value=9.6e-06  Score=56.49  Aligned_cols=97  Identities=12%  Similarity=0.173  Sum_probs=58.4

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+ ++++.|.||+|.+|+.+++.|.+.+ .+++.+.+..+... ...+....+.. ..+     .+.+.+   . ++++|
T Consensus         1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~-~~~~~~~~~~g~~~~-----~~~~~~---~-~~~vD   70 (345)
T 2ozp_A            1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGE-PVHFVHPNLRGRTNL-----KFVPPE---K-LEPAD   70 (345)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTS-BGGGTCGGGTTTCCC-----BCBCGG---G-CCCCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCc-hhHHhCchhcCcccc-----cccchh---H-hcCCC
Confidence            54 5789999999999999999998776 47777655431110 00000011111 111     122332   2 47899


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +|+.+.|..        .....++.+.+.| + ++|-.|+
T Consensus        71 vV~~a~g~~--------~s~~~a~~~~~aG-~-~VId~Sa  100 (345)
T 2ozp_A           71 ILVLALPHG--------VFAREFDRYSALA-P-VLVDLSA  100 (345)
T ss_dssp             EEEECCCTT--------HHHHTHHHHHTTC-S-EEEECSS
T ss_pred             EEEEcCCcH--------HHHHHHHHHHHCC-C-EEEEcCc
Confidence            999998832        3566777777888 4 5777775

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=98.23  E-value=1.7e-05  Score=54.05  Aligned_cols=103  Identities=15%  Similarity=0.144  Sum_probs=68.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC-----------------CCchHHHHHhhhhc-cCCeEEEEccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI-----------------GLDIDKLQMLLSFK-KQGAHLIEASF   63 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~-----------------~~~~~~~~~~~~~~-~~~~~~~~~D~   63 (124)
                      ..+|+|.|+ |++|..+++.|+..| -++++++.+.-                 ...+...+.+..+. .-.++.+..++
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l  114 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNI  114 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccC
Confidence            468999985 999999999999999 57888876641                 11122223333332 23466777788


Q ss_pred             CChHHHHHHh-----------cccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           64 ADHRSLVEAV-----------KRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        64 ~~~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ++.+.+..++           ++.|+|+.+..       |...-..+-++|.+.+ . .+|+.
T Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-------n~~~R~~in~~c~~~~-~-Pli~~  168 (292)
T 3h8v_A          115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-------NFEARMTINTACNELG-Q-TWMES  168 (292)
T ss_dssp             TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-------SHHHHHHHHHHHHHHT-C-CEEEE
T ss_pred             CcHHHHHHHhhhhcccccccCCCCCEEEECCc-------chhhhhHHHHHHHHhC-C-CEEEe
Confidence            7767777665           57999998764       3333355777788887 3 45543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.22  E-value=2.2e-06  Score=59.29  Aligned_cols=73  Identities=14%  Similarity=0.152  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +++++|+|++|.+|..+++.+...|++|+++++++     .+.+....+.   ... ..|..+.+   .+.++..  ++|
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~-----~~~~~~~~~g---a~~-~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE-----DKLRRAKALG---ADE-TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHT---CSE-EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhcC---CCE-EEcCCcccHHHHHHHHhCCCCce
Confidence            57899999999999999999999999999999976     3333333322   221 24665543   3444443  589


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      ++|+++|
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.21  E-value=1.2e-05  Score=55.69  Aligned_cols=107  Identities=20%  Similarity=0.230  Sum_probs=63.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .++++.|+|+ |.+|..++..|+..|.  ++.++++++...+....+...... ..++.+...|       .+.++++|+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDi   79 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCE
Confidence            3578999996 9999999999998885  899999875111111111111111 1234444332       246889999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||.++|..+        ..+.|..-.+.+++.+.+..+-..++.+|
T Consensus        80 Vvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            999998432        24557777788888888876322344433

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.21  E-value=1.4e-05  Score=54.85  Aligned_cols=105  Identities=10%  Similarity=0.103  Sum_probs=63.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++++.|+|+ |.+|..++..|+..|+ +|.++++++...+....+.....  ......+...  +|   + +.++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence            478999998 9999999999999996 88888887632211111111110  0112222211  12   3 458899999


Q ss_pred             EEeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           80 ICTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        80 i~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      |.++|...-        ...|....+.+++.+.+.. .+.++.+
T Consensus        75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~  117 (309)
T 1ur5_A           75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIM  117 (309)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE
Confidence            999974321        1344566677888887776 4555443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=98.21  E-value=4.3e-06  Score=56.44  Aligned_cols=37  Identities=27%  Similarity=0.452  Sum_probs=29.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~   37 (124)
                      |+++++.|.|++|.+|+.+++.+.+. +.++... +|++
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            66789999999999999999999875 5777664 6654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.21  E-value=4.7e-07  Score=61.45  Aligned_cols=74  Identities=12%  Similarity=0.128  Sum_probs=47.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC---CeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ---GAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++++|+|+ |++|++++..|++.| +|++..|+.    +...+..+.+...   .. .+.+|+.+.   .+.+.++|+
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~----~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Di  196 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV----EKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDI  196 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH----HHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCH----HHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCE
Confidence            4678999998 599999999999999 999999876    1111211111110   10 112233331   344567999


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      +||++|.
T Consensus       197 lVn~ag~  203 (287)
T 1nvt_A          197 IINATPI  203 (287)
T ss_dssp             EEECSCT
T ss_pred             EEECCCC
Confidence            9999874

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=98.20  E-value=6.9e-06  Score=57.50  Aligned_cols=99  Identities=12%  Similarity=0.197  Sum_probs=59.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+++++.|.||+|.+|+.+++.|.+.+ .+++.+.+..+.. ....+....+... +   ..|+.-.+  .+.++++|+|
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~~-v---~~dl~~~~--~~~~~~vDvV   86 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRAQ-K---LPTLVSVK--DADFSTVDAV   86 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTTS-C---CCCCBCGG--GCCGGGCSEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcCc-c---cccceecc--hhHhcCCCEE
Confidence            344689999999999999999998876 5777765543111 0111111111111 1   12332222  3456689999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      |.|.|..        .+...++.+ +.| + ++|-.|+
T Consensus        87 f~atp~~--------~s~~~a~~~-~aG-~-~VId~sa  113 (359)
T 1xyg_A           87 FCCLPHG--------TTQEIIKEL-PTA-L-KIVDLSA  113 (359)
T ss_dssp             EECCCTT--------THHHHHHTS-CTT-C-EEEECSS
T ss_pred             EEcCCch--------hHHHHHHHH-hCC-C-EEEECCc
Confidence            9998732        245666777 777 3 5777665

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.19  E-value=8.2e-06  Score=57.44  Aligned_cols=74  Identities=27%  Similarity=0.300  Sum_probs=54.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|+|+ |.+|..+++.+...|++|++.+|++     .+.+.........+   ..+..+.+++.+++.++|+||+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~-----~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~  237 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINI-----DKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIG  237 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH-----HHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEE
Confidence            3678999997 9999999999999999999999986     33222222112222   2234556778888889999999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +++
T Consensus       238 ~~~  240 (377)
T 2vhw_A          238 AVL  240 (377)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            886

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=98.19  E-value=2.8e-05  Score=53.54  Aligned_cols=98  Identities=13%  Similarity=0.221  Sum_probs=62.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      +.++|.|+|+ |.+|..++..|+..+  .++.++++++...+....+....  +....+.+.. |  +    .++++++|
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aD   76 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDAD   76 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCC
Confidence            4568999998 999999999998887  48888888752111111111111  1112333332 2  2    45588999


Q ss_pred             EEEEeCccccc--------eecchHHHHHHHHHHHHhC
Q 033236           78 VVICTISGVHF--------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        78 ~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~  107 (124)
                      +||..+|...-        ...|..-.+.+++.+.+..
T Consensus        77 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  114 (317)
T 3d0o_A           77 LVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK  114 (317)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999975432        1345566677788887776

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.19  E-value=6.6e-06  Score=56.97  Aligned_cols=100  Identities=16%  Similarity=0.095  Sum_probs=61.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      |++.|+|+ |.+|..++..|+..|+ +|.+.++++...+....+.........   ....+.-..++.++++++|+||.+
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~---~~~~i~~t~d~~ea~~~aDiVi~a   85 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVD---TNVSVRAEYSYEAALTGADCVIVT   85 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTT---CCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccC---CCCEEEEeCCHHHHhCCCCEEEEc
Confidence            58999997 9999999999999997 999999886322221111111111000   001111113355578899999999


Q ss_pred             Cccccc-------------eecchHHHHHHHHHHHHhC
Q 033236           83 ISGVHF-------------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~~-------------~~~~~~~~~~~~~~~~~~~  107 (124)
                      +|...-             ...|..-.+.+++.+.+..
T Consensus        86 ~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~  123 (331)
T 1pzg_A           86 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC  123 (331)
T ss_dssp             CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            863321             1123445677888887775

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.18  E-value=2.6e-06  Score=59.28  Aligned_cols=74  Identities=20%  Similarity=0.303  Sum_probs=51.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHh-cccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAV-KRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~d~   78 (124)
                      +++++|+||+|.+|...++.+...|.+|+++++++     .+.+....+...  .+  .|..+.+   .+.++. .++|+
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~--~~--~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST-----GKCEACERLGAK--RG--INYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHTCS--EE--EETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHhcCCC--EE--EeCCchHHHHHHHHHhCCCceE
Confidence            56899999999999999999999999999999886     333433332211  12  3444443   233322 25999


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      +++++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.17  E-value=7.6e-06  Score=56.75  Aligned_cols=93  Identities=14%  Similarity=0.280  Sum_probs=59.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d~   78 (124)
                      ++++|+||+|.+|...++.+...|.+|+++++++     .+.+.+..+...  .+  .|..+.+   .+.++..  ++|+
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~~Ga~--~~--~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD-----EQIALLKDIGAA--HV--LNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCG-----GGHHHHHHHTCS--EE--EETTSTTHHHHHHHHHHHHCCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHcCCC--EE--EECCcHHHHHHHHHHhcCCCCcE
Confidence            6789999999999999999988999999999876     333333332211  22  2444433   3333332  6999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +++++|..        .....++.+.+.   .+++.++
T Consensus       237 vid~~g~~--------~~~~~~~~l~~~---G~iv~~G  263 (349)
T 3pi7_A          237 FLDAVTGP--------LASAIFNAMPKR---ARWIIYG  263 (349)
T ss_dssp             EEESSCHH--------HHHHHHHHSCTT---CEEEECC
T ss_pred             EEECCCCh--------hHHHHHhhhcCC---CEEEEEe
Confidence            99999831        123344444433   4777765

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=98.17  E-value=1.2e-05  Score=55.77  Aligned_cols=77  Identities=14%  Similarity=0.117  Sum_probs=48.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEE------ccc-CChHHHHHHh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE------ASF-ADHRSLVEAV   73 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~D~-~~~~~~~~~~   73 (124)
                      |+.|++.|.|+ |.+|..++..|.+.|++|++++|++     ...+.....  ..+.+..      ..+ ...+++.+++
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA-----QRIKEIQDR--GAIIAEGPGLAGTAHPDLLTSDIGLAV   73 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHHH--TSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH-----HHHHHHHhc--CCeEEeccccccccccceecCCHHHHH
Confidence            34579999995 9999999999999999999999986     222222111  0111111      011 0122345566


Q ss_pred             cccCEEEEeCcc
Q 033236           74 KRVDVVICTISG   85 (124)
Q Consensus        74 ~~~d~vi~~a~~   85 (124)
                      +++|+|+.+.+.
T Consensus        74 ~~~D~vi~~v~~   85 (359)
T 1bg6_A           74 KDADVILIVVPA   85 (359)
T ss_dssp             TTCSEEEECSCG
T ss_pred             hcCCEEEEeCCc
Confidence            789999988763

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.16  E-value=4.7e-06  Score=57.59  Aligned_cols=74  Identities=18%  Similarity=0.201  Sum_probs=50.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++.     +.+....+...  .+  .|..+.+   .+.+...  ++|
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~lga~--~~--~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK-----HTEELLRLGAA--YV--IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST-----THHHHHHHTCS--EE--EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhCCCc--EE--EeCCcccHHHHHHHHhCCCCCc
Confidence            578999999999999999998888999999999872     22223222211  12  2444433   3444433  599


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++++++|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999983

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=98.16  E-value=1.4e-05  Score=53.97  Aligned_cols=66  Identities=20%  Similarity=0.307  Sum_probs=47.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |++.|.|++|.+|..++..|.+.|++|++.+|++     ...+....   .++.     ..+   ..++++++|+||.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~-----~~~~~~~~---~g~~-----~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP-----EGRDRLQG---MGIP-----LTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH-----HHHHHHHH---TTCC-----CCC---SSGGGGTCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHh---cCCC-----cCC---HHHHhcCCCEEEEcC
Confidence            6899999889999999999999999999998876     22222222   2221     122   234567899999988


Q ss_pred             cc
Q 033236           84 SG   85 (124)
Q Consensus        84 ~~   85 (124)
                      .+
T Consensus        76 ~~   77 (286)
T 3c24_A           76 PD   77 (286)
T ss_dssp             CH
T ss_pred             Cc
Confidence            73

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.14  E-value=8e-06  Score=56.46  Aligned_cols=73  Identities=23%  Similarity=0.237  Sum_probs=50.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~d~v   79 (124)
                      +++++|+|+ |.+|...++.+...|++|+++++++     .+.+....   .+... ..|..+.+   .+.++..++|++
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~---lGa~~-~~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD-----EKLELAKE---LGADL-VVNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHH---TTCSE-EECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---CCCCE-EecCCCccHHHHHHHHhCCCCEE
Confidence            578999999 8899999999988999999999886     33333333   22222 24655433   333333579999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      |+++|.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999983

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.13  E-value=1e-05  Score=56.11  Aligned_cols=74  Identities=19%  Similarity=0.192  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH---HHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS---LVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~   76 (124)
                      +++++|+|++|.+|..+++.+... |++|+++++++     .+.+....+.   ... ..|..+.+.   +.++..  ++
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~-----~~~~~~~~~g---~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE-----EAVEAAKRAG---ADY-VINASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH-----HHHHHHHHHT---CSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH-----HHHHHHHHhC---CCE-EecCCCccHHHHHHHHhcCCCc
Confidence            578999999889999999999988 99999999876     3333333322   111 234544433   555553  69


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999984

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=98.12  E-value=2.6e-05  Score=53.04  Aligned_cols=35  Identities=14%  Similarity=0.056  Sum_probs=31.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .|++.|.| .|.+|..++..|.+.|++|++.+|++.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~   49 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIE   49 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            46899998 599999999999999999999999883

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.12  E-value=1.1e-05  Score=58.47  Aligned_cols=35  Identities=26%  Similarity=0.330  Sum_probs=31.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~   37 (124)
                      ++|+|.|.| .|++|..++..|++.  |++|++++|++
T Consensus         8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~   44 (481)
T 2o3j_A            8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNT   44 (481)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence            457899998 599999999999998  79999999986

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=98.11  E-value=3.7e-05  Score=53.36  Aligned_cols=94  Identities=17%  Similarity=0.218  Sum_probs=58.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeC-CCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQR-PDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |+++++.|.||+|.+|+.+++.|.+++   .+++.+.. ++.+.      .. .+....+.+...|   ++    .++++
T Consensus         1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~------~~-~~~~~~i~~~~~~---~~----~~~~v   66 (336)
T 2r00_A            1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK------TY-RFNGKTVRVQNVE---EF----DWSQV   66 (336)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC------EE-EETTEEEEEEEGG---GC----CGGGC
T ss_pred             CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC------ce-eecCceeEEecCC---hH----HhcCC
Confidence            346889999999999999999998873   56666653 22111      00 0112222232222   22    34689


Q ss_pred             CEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           77 DVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        77 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |+||.|.|        .......++.+.+.| + ++|-.|+.
T Consensus        67 DvVf~a~g--------~~~s~~~a~~~~~~G-~-~vId~s~~   98 (336)
T 2r00_A           67 HIALFSAG--------GELSAKWAPIAAEAG-V-VVIDNTSH   98 (336)
T ss_dssp             SEEEECSC--------HHHHHHHHHHHHHTT-C-EEEECSST
T ss_pred             CEEEECCC--------chHHHHHHHHHHHcC-C-EEEEcCCc
Confidence            99999988        233567777888888 4 56666644

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.11  E-value=9.6e-06  Score=50.33  Aligned_cols=74  Identities=12%  Similarity=0.159  Sum_probs=51.8

Q ss_pred             CChhcHHHHHHHhhCCCeEEEEeCCCCCCch--HHHHHhhhhccCCeEEEEcccCCh--HHHHHHhcc------cCEEEE
Q 033236           12 TGYIGRRIVKASLAQGHETYVLQRPDIGLDI--DKLQMLLSFKKQGAHLIEASFADH--RSLVEAVKR------VDVVIC   81 (124)
Q Consensus        12 ~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~------~d~vi~   81 (124)
                      +|.++.+.++.|++.|.+|++..|++.....  ...+.... .......+.+|++++  +++.++++.      -|++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999999999999999988886533211  11122211 234466788999999  888877642      399999


Q ss_pred             eCccc
Q 033236           82 TISGV   86 (124)
Q Consensus        82 ~a~~~   86 (124)
                      |+|..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99853

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.11  E-value=3.4e-06  Score=57.95  Aligned_cols=74  Identities=12%  Similarity=0.119  Sum_probs=51.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +++++|+||+|.+|...++.+...|.+|+++++++     .+.+....+...  ..  .|..+.+   .+.+...  ++|
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~Ga~--~~--~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP-----EKAAHAKALGAW--ET--IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHHHTCS--EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHcCCC--EE--EeCCCccHHHHHHHHhCCCCce
Confidence            57899999999999999999988999999999876     333444332211  22  3444433   3444443  599


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++++++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999984

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=98.10  E-value=4.1e-05  Score=52.60  Aligned_cols=66  Identities=21%  Similarity=0.364  Sum_probs=46.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|++.|.|. |.+|..++..|++.|++|++.+|++     .+.+   .+...++..       .+++.++++++|+|+.+
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~-----~~~~---~l~~~g~~~-------~~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTP-----ARAA---SLAALGATI-------HEQARAAARDADIVVSM   94 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCH-----HHHH---HHHTTTCEE-------ESSHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCH-----HHHH---HHHHCCCEe-------eCCHHHHHhcCCEEEEE
Confidence            468999985 9999999999999999999999987     2222   222223322       23445566677877777


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        95 vp   96 (320)
T 4dll_A           95 LE   96 (320)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.10  E-value=6.4e-06  Score=56.00  Aligned_cols=73  Identities=27%  Similarity=0.393  Sum_probs=50.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++     .+.+....+   +... ..|..+.+++.+.+.++|++++ 
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~---ga~~-~~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP-----EKLALPLAL---GAEE-AATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG-----GGSHHHHHT---TCSE-EEEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhc---CCCE-EEECCcchhHHHHhcCceEEEE-
Confidence            57899999999999999999988999999999976     222222222   2222 2355441334444478999999 


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            874

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.08  E-value=6.5e-05  Score=51.72  Aligned_cols=104  Identities=17%  Similarity=0.195  Sum_probs=63.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++|.|+|+ |.+|..++..|+..+.  ++.+++.++...+....+..+... ...+.+. .  .+    .++++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCEE
Confidence            468999997 9999999999999886  899999886433322222221110 0122222 1  12    3458899999


Q ss_pred             EEeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           80 ICTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        80 i~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      |.++|...-        ...|....+.+++.+.+.. .+-++.+
T Consensus        79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv  121 (318)
T 1y6j_A           79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV  121 (318)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE
T ss_pred             EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE
Confidence            999985321        2345666788888888876 3444433

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.08  E-value=6.9e-06  Score=55.33  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=47.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |++|++++..|++.|.+|++..|++    +...+..+.+... .+..  .|+   +++.+  .++|+||
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~----~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivI  185 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF----SKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVI  185 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH----HHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEE
Confidence            4678999997 8899999999999999999999986    2222222222211 2222  232   21111  3799999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      ++++..
T Consensus       186 n~t~~~  191 (272)
T 1p77_A          186 NATSAG  191 (272)
T ss_dssp             ECCCC-
T ss_pred             ECCCCC
Confidence            998743

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=98.08  E-value=3e-05  Score=57.04  Aligned_cols=84  Identities=15%  Similarity=0.141  Sum_probs=64.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++++...        +..    ..++.+|.+|++.++++ ++++|.++.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~--------~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~  415 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPV--------CND----HVVVYGDATVGQTLRQAGIDRASGIIVT  415 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSS--------CCS----SCEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHH--------hhc----CCEEEeCCCCHHHHHhcCccccCEEEEE
Confidence            67899996 9999999999999999999999998321        111    17999999999999998 6789999988


Q ss_pred             CccccceecchHHHHHHHHHHHHhC
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+..       .....++..+++.+
T Consensus       416 ~~~d-------~~ni~~~~~ak~l~  433 (565)
T 4gx0_A          416 TNDD-------STNIFLTLACRHLH  433 (565)
T ss_dssp             CSCH-------HHHHHHHHHHHHHC
T ss_pred             CCCc-------hHHHHHHHHHHHHC
Confidence            7631       22334445555565

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.08  E-value=1.9e-05  Score=53.84  Aligned_cols=106  Identities=14%  Similarity=0.119  Sum_probs=66.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++.|+|+ |.+|..++..|+..|.  +|.+.++++...+....+.....  ......+...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            58999998 9999999999999886  89999998622111111111111  1122222222  12    4578899999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |.++|..+        ....|..-.+.+++.+.+.++-..++.+|
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99998542        12346666778888888876323444444

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=98.08  E-value=1.6e-05  Score=57.38  Aligned_cols=96  Identities=10%  Similarity=0.180  Sum_probs=62.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-C---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-H---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~   78 (124)
                      ++++|.| .|++|+.++..|++.. .   +|++.+.+....     +..+.. ..++...+.|-.|. +.+.+++++.|+
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-----~~~~~~-g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-----DVAQQY-GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-----CHHHHH-TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-----hHHhhc-CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            6799999 5999999999999864 4   788887765322     111111 22333444444555 346668877799


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+|++.+.        ....++++|.+.| + +++-++
T Consensus        87 VIN~s~~~--------~~l~Im~acleaG-v-~YlDTa  114 (480)
T 2ph5_A           87 LIDVSIGI--------SSLALIILCNQKG-A-LYINAA  114 (480)
T ss_dssp             EEECCSSS--------CHHHHHHHHHHHT-C-EEEESS
T ss_pred             EEECCccc--------cCHHHHHHHHHcC-C-CEEECC
Confidence            99866432        2467999999999 3 555444

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=98.08  E-value=2.3e-05  Score=54.63  Aligned_cols=99  Identities=20%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHh-hhh-------ccCCeEEEEcccCChHHHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQML-LSF-------KKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~-~~~-------~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      +++++.|.||+|++|+.+++.|.+.. .++..+..+.+.. ....... ..+       ....+.+  .|. +++.    
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----   74 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-GKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----   74 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-TSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-CCCHHHhcCcccccccccCCceeEE--eeC-CHHH----
Confidence            35789999999999999999998765 5777775221100 0001100 000       0011122  222 3333    


Q ss_pred             hcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           73 VKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        73 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ++++|+|+.+.|        .......++.+.+.| + ++|-.|+.
T Consensus        75 ~~~vDvVf~atp--------~~~s~~~a~~~~~aG-~-~VId~s~~  110 (350)
T 2ep5_A           75 HKDVDVVLSALP--------NELAESIELELVKNG-K-IVVSNASP  110 (350)
T ss_dssp             GTTCSEEEECCC--------HHHHHHHHHHHHHTT-C-EEEECSST
T ss_pred             hcCCCEEEECCC--------hHHHHHHHHHHHHCC-C-EEEECCcc
Confidence            368999998887        233567888888888 4 46666653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.07  E-value=4.7e-05  Score=52.43  Aligned_cols=107  Identities=19%  Similarity=0.200  Sum_probs=66.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC-CCCch-HHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD-IGLDI-DKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~-~~~~~-~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .+++.|+|+ |.+|..++..++..|. +|+++++++ ....+ ...+....  +......+...+  +.    +.++++|
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----~a~~~aD   80 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----ADTADSD   80 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----HHhCCCC
Confidence            468999996 9999999999999998 999999983 11111 11111111  111122222221  22    4678999


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +||.++|..+        ....|..-.+.+.+.+.+..+-..++.+|
T Consensus        81 vVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           81 VVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            9999987432        23456677788888888876322444444

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.07  E-value=1.1e-05  Score=57.76  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=30.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.| +|++|..++..|++.|++|++++|++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4789998 59999999999999999999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=98.05  E-value=6e-05  Score=50.23  Aligned_cols=102  Identities=18%  Similarity=0.172  Sum_probs=63.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+++|.|+ |++|..+++.|+..|. ++++++++.-+                  ..+...+.+..+. .-.++.+..+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999996 8899999999999995 77887665311                  1111112222221 1234455544


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      + +.+.+.+++++.|+||.+...       ...-..+-+.|.+.+ . .+|..
T Consensus       107 ~-~~~~~~~~~~~~DvVi~~~d~-------~~~r~~l~~~~~~~~-~-p~i~~  149 (251)
T 1zud_1          107 L-TGEALKDAVARADVVLDCTDN-------MATRQEINAACVALN-T-PLITA  149 (251)
T ss_dssp             C-CHHHHHHHHHHCSEEEECCSS-------HHHHHHHHHHHHHTT-C-CEEEE
T ss_pred             C-CHHHHHHHHhcCCEEEECCCC-------HHHHHHHHHHHHHhC-C-CEEEE
Confidence            4 446778888899999987652       233345666777666 3 34443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=98.04  E-value=5.6e-05  Score=52.37  Aligned_cols=108  Identities=14%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      ..+++.|+|+ |.+|..++..|+..|.  ++.+++++....+....+...... ......+..+  |.    +.++++|+
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~~~~aDi   90 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SVTANSKL   90 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GGGTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HHhCCCCE
Confidence            3578999997 9999999999999885  899999875111111112221100 1122233221  22    25889999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||.++|..+        ..+.|..-.+.+.+.+.+..+-..++.+|
T Consensus        91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999998432        34566777788888888876322444444

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=98.04  E-value=8.7e-05  Score=52.09  Aligned_cols=94  Identities=23%  Similarity=0.226  Sum_probs=56.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++++.|.||+|++|..+++.|.+.++   ++..+....+.-     +.. .+......+...|   ++    .++++|+
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG-----~~~-~~~~~~~~~~~~~---~~----~~~~~Dv   67 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG-----KSL-KFKDQDITIEETT---ET----AFEGVDI   67 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTT-----CEE-EETTEEEEEEECC---TT----TTTTCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCC-----Ccc-eecCCCceEeeCC---HH----HhcCCCE
Confidence            357899999999999999999988754   344443222110     000 0111112222222   22    2478999


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ||.|.|        .......++.+.+.| + ++|-.|+.
T Consensus        68 vf~a~~--------~~~s~~~a~~~~~~G-~-~vIDlSa~   97 (366)
T 3pwk_A           68 ALFSAG--------SSTSAKYAPYAVKAG-V-VVVDNTSY   97 (366)
T ss_dssp             EEECSC--------HHHHHHHHHHHHHTT-C-EEEECSST
T ss_pred             EEECCC--------hHhHHHHHHHHHHCC-C-EEEEcCCc
Confidence            999987        333566777777888 4 56766653

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.03  E-value=2.2e-05  Score=56.95  Aligned_cols=110  Identities=16%  Similarity=0.185  Sum_probs=63.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeE-EE-----EcccCChHHHHHH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAH-LI-----EASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~~-----~~D~~~~~~~~~~   72 (124)
                      .|+|.|.| .|++|..++..|++.|++|+++++++     .+.+.+....    .++++ .+     ...+.-..++.++
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~-----~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a   81 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQ-----AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA   81 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH
Confidence            47899998 59999999999999999999999986     2222222110    01110 00     0001001234455


Q ss_pred             hcccCEEEEeCccc--cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           73 VKRVDVVICTISGV--HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        73 ~~~~d~vi~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ++++|++|.+.+..  ....++......+++.+.+.-....+|...|+
T Consensus        82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST  129 (478)
T 2y0c_A           82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST  129 (478)
T ss_dssp             HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            66799999987631  12234556666666666553212344433334

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=98.03  E-value=2.7e-05  Score=53.21  Aligned_cols=34  Identities=26%  Similarity=0.434  Sum_probs=31.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++.|+| .|.+|..+++.|.+.|++|++.+|++
T Consensus         9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~   42 (306)
T 3l6d_A            9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSP   42 (306)
T ss_dssp             SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            46899998 59999999999999999999999987

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=98.03  E-value=7.9e-06  Score=55.30  Aligned_cols=67  Identities=15%  Similarity=0.195  Sum_probs=48.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|+|+ |+.|++++..|.+.|. +|++..|++        ++.+.+.. .+...     ..+++.++.+++|+|||
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~--------~~a~~la~-~~~~~-----~~~~~~~~~~~aDiVIn  181 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTM--------SRFNNWSL-NINKI-----NLSHAESHLDEFDIIIN  181 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCG--------GGGTTCCS-CCEEE-----CHHHHHHTGGGCSEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHH-hcccc-----cHhhHHHHhcCCCEEEE
Confidence            578999996 8999999999999997 899999987        22222211 22221     34567777888999999


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus       182 aTp  184 (277)
T 3don_A          182 TTP  184 (277)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.03  E-value=0.00018  Score=51.87  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=68.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   81 (124)
                      .++++|.|| |.+|..+++.| +++++|.++.+++    +......+.  -++..++.+|.+|++.+.+. ++++|+++-
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~----~r~~~la~~--l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia  306 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNL----QRAEKLSEE--LENTIVFCGDAADQELLTEENIDQVDVFIA  306 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCH----HHHHHHHHH--CTTSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCH----HHHHHHHHH--CCCceEEeccccchhhHhhcCchhhcEEEE
Confidence            357899986 99999999987 5568999999987    222222222  24678999999999999997 788999988


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ..+-.   +.|+.    ..-.+++.| +++.+-.
T Consensus       307 ~T~~D---e~Ni~----~~llAk~~g-v~kvIa~  332 (461)
T 4g65_A          307 LTNED---ETNIM----SAMLAKRMG-AKKVMVL  332 (461)
T ss_dssp             CCSCH---HHHHH----HHHHHHHTT-CSEEEEE
T ss_pred             cccCc---HHHHH----HHHHHHHcC-Ccccccc
Confidence            77631   23443    333455677 6766643

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.03  E-value=2.3e-05  Score=54.80  Aligned_cols=75  Identities=25%  Similarity=0.244  Sum_probs=54.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+.+++|+|+ |.+|...++.+...|.+|+++++++     .+.+....  ..+... ..|..+.+.+.++..++|+++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~-----~~~~~~~~--~lGa~~-v~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSP-----SKKEEALK--NFGADS-FLVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG-----GGHHHHHH--TSCCSE-EEETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH--hcCCce-EEeccCHHHHHHhhCCCCEEEE
Confidence            3578999996 9999999999988999999999886     22222220  122221 2466677777777778999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      ++|.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9984

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=98.03  E-value=9e-05  Score=50.07  Aligned_cols=70  Identities=30%  Similarity=0.457  Sum_probs=48.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |++|++.|.|+ |.+|..++..|.+.|+   +|++.+|++     .+.+.+..  ..++...       .+..++++++|
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~-----~~~~~l~~--~~gi~~~-------~~~~~~~~~aD   65 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSL-----DKLDFFKE--KCGVHTT-------QDNRQGALNAD   65 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSS-----HHHHHHHH--TTCCEEE-------SCHHHHHSSCS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCH-----HHHHHHHH--HcCCEEe-------CChHHHHhcCC
Confidence            77789999986 9999999999999998   999999987     22222211  1133321       23445667889


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +||.+..+
T Consensus        66 vVilav~p   73 (280)
T 3tri_A           66 VVVLAVKP   73 (280)
T ss_dssp             EEEECSCG
T ss_pred             eEEEEeCH
Confidence            88888854

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.03  E-value=2.7e-05  Score=53.55  Aligned_cols=107  Identities=15%  Similarity=0.088  Sum_probs=66.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-C--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-G--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++.|+||+|.+|..++..|... +  .++.++++++ .......+.. +. .....+... ..  ++..+.++++|+||
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~-~~-~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS-HI-PTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHH-TS-CSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhh-CC-CCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            58999999999999999998775 5  5788888876 2111122211 11 112222211 01  12345778899999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .++|..+        ..+.|..-.+.+.+.+.+..+-..++.+|
T Consensus        75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9998542        23457777788888888876322444444

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=98.02  E-value=3.7e-05  Score=53.99  Aligned_cols=68  Identities=19%  Similarity=0.350  Sum_probs=54.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++++|.|+ |.+|+.+++.+.+.|++|++++.++..+...          -.-.++..|..|.+.+.++.+++|+|..
T Consensus        12 ~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~----------~ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           12 GATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY----------VAHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG----------GSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh----------hCCEEEECCCCCHHHHHHHHHhCCccee
Confidence            568999995 8999999999999999999998876322110          1124777999999999999999998755

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.01  E-value=2.4e-05  Score=56.69  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=32.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC-CC-eEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ-GH-ETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g~-~v~~~~r~~   37 (124)
                      +.|+|.|.|+ |++|..++..|++. |+ +|++.++++
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~   53 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNS   53 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence            4578999985 99999999999999 99 999999998

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=98.01  E-value=2.6e-05  Score=56.33  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCC
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPD   37 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~   37 (124)
                      |+ +|++.|.| .|++|..++..|++.  |++|++++|++
T Consensus         2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~   40 (467)
T 2q3e_A            2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNE   40 (467)
T ss_dssp             CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred             CCCccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence            54 37899998 599999999999998  89999999986

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.00  E-value=1.4e-05  Score=55.61  Aligned_cols=110  Identities=16%  Similarity=0.041  Sum_probs=66.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCCCc--hHHHHHhhhhccCC-eEEEEcccCChHHHH
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIGLD--IDKLQMLLSFKKQG-AHLIEASFADHRSLV   70 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~~~--~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~   70 (124)
                      |+..||.|+||+|.||+.++..|.....       ++.+++..+....  -...+ +.+...+. ......     .+..
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~D-L~~~~~~~~~~~~~~-----~~~~   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAE-LEDCAFPLLDKVVVT-----ADPR   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTTCTTEEEEEEE-----SCHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhh-hhhcCccCCCcEEEc-----CChH
Confidence            4455899999999999999998876542       6777777541100  00111 11111121 122222     1245


Q ss_pred             HHhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           71 EAVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        71 ~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      ++++++|+||..+|..+        ..+.|..-.+.+.+.+.+..... +++.+|
T Consensus        96 ~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            67999999999998542        24567777888888887753122 445555

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.00  E-value=1.6e-05  Score=54.98  Aligned_cols=75  Identities=21%  Similarity=0.330  Sum_probs=50.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHhc--ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAVK--RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~v   79 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++     .+.+....+...  .++..+ .+ .+.+.++..  ++|++
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~ga~--~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT-----AATEFVKSVGAD--IVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHTCS--EEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHhcCCc--EEecCc-hhHHHHHHHHhCCCCceEE
Confidence            56899999999999999999999999999999976     223333332211  233333 22 234444443  49999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      ++++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999984

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=98.00  E-value=3.7e-05  Score=52.59  Aligned_cols=34  Identities=24%  Similarity=0.332  Sum_probs=31.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +|+|.|.| .|.+|..++..|++.|++|++.+|++
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~   54 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTL   54 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            57899998 59999999999999999999999987

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=98.00  E-value=0.0001  Score=51.01  Aligned_cols=96  Identities=16%  Similarity=0.136  Sum_probs=60.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhh---c-cCCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSF---K-KQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .+++.|+|+ |.+|..++..|+..|+ +|.+.++++...+....+.....   . ..++... .|      + ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCC
Confidence            468999997 9999999999999998 99999998633221111111111   1 1122211 22      3 4678999


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhC
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +||.++|...        ....|..-.+.+++.+.+..
T Consensus        85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~  122 (328)
T 2hjr_A           85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC  122 (328)
T ss_dssp             EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC
Confidence            9999986332        11234555677777777765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=98.00  E-value=1.2e-05  Score=55.74  Aligned_cols=73  Identities=18%  Similarity=0.204  Sum_probs=49.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   76 (124)
                      +.+++|+|+ |.+|...++.+...|+ +|+++++++     .+.+....+.   ... ..|..+++   .+.++..  ++
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~-----~~~~~~~~~G---a~~-~~~~~~~~~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD-----FRRELAKKVG---ADY-VINPFEEDVVKEVMDITDGNGV  237 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH-----HHHHHHHHHT---CSE-EECTTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHhC---CCE-EECCCCcCHHHHHHHHcCCCCC
Confidence            468999999 9999999999988998 999999876     3333333322   221 13444433   3334333  58


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|.++|.
T Consensus       238 D~vid~~g~  246 (348)
T 2d8a_A          238 DVFLEFSGA  246 (348)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.99  E-value=1.2e-05  Score=54.26  Aligned_cols=36  Identities=28%  Similarity=0.543  Sum_probs=28.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhh-CCCeEEEE-eCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLA-QGHETYVL-QRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~-~r~~   37 (124)
                      .++++.|+|++|.+|+.+++.+.+ .++++... ++++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~   41 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG   41 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence            357899999999999999999875 56888754 4443

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.99  E-value=2.2e-05  Score=57.78  Aligned_cols=70  Identities=20%  Similarity=0.280  Sum_probs=58.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHH-hcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEA-VKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~-~~~~d~vi   80 (124)
                      .++++|.|. |-.|+.+++.|.+.|++|++++.++        +..+..... ++.++.+|.++++.+.++ +++++.++
T Consensus       127 ~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~--------~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi  197 (565)
T 4gx0_A          127 RGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNY--------DQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSII  197 (565)
T ss_dssp             CSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCH--------HHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEE
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEE
Confidence            467999995 8999999999999999999999987        223333344 789999999999999998 67899888


Q ss_pred             E
Q 033236           81 C   81 (124)
Q Consensus        81 ~   81 (124)
                      .
T Consensus       198 ~  198 (565)
T 4gx0_A          198 A  198 (565)
T ss_dssp             E
T ss_pred             E
Confidence            6

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.99  E-value=9.3e-05  Score=50.93  Aligned_cols=106  Identities=18%  Similarity=0.140  Sum_probs=66.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++.|+|+ |.+|..++..|+..|.  ++.++++++...+....+....  .......+...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            58999996 9999999999998885  8999999873221111122211  112233333222  1    2478889999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |.++|..+        ....|..-.+.+.+.+.+..+-..++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            99998542        12456677788888888776322344443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.98  E-value=1.2e-05  Score=54.77  Aligned_cols=34  Identities=29%  Similarity=0.450  Sum_probs=27.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.++| -|..|..+++.|++.|++|++.+|++
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~   38 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTA   38 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC----
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            46799998 59999999999999999999999988

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.98  E-value=3.4e-05  Score=52.60  Aligned_cols=70  Identities=30%  Similarity=0.334  Sum_probs=51.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .++++.|.|+ |.+|+.+++.+...|++|++.+|++     .+.+....   .+++.+     +.+++.++++++|+|++
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~-----~~~~~~~~---~g~~~~-----~~~~l~~~l~~aDvVi~  221 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSS-----AHLARITE---MGLVPF-----HTDELKEHVKDIDICIN  221 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHH---TTCEEE-----EGGGHHHHSTTCSEEEE
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHH---CCCeEE-----chhhHHHHhhCCCEEEE
Confidence            4688999995 9999999999999999999999986     22221111   233332     23457778889999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       222 ~~p~  225 (300)
T 2rir_A          222 TIPS  225 (300)
T ss_dssp             CCSS
T ss_pred             CCCh
Confidence            8874

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.98  E-value=3.5e-05  Score=52.37  Aligned_cols=70  Identities=26%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|.|+ |.+|+.+++.+...|++|++.+|++     .+.+...   ..++..+     +.+++.++++++|+|++
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~-----~~~~~~~---~~g~~~~-----~~~~l~~~l~~aDvVi~  219 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARES-----DLLARIA---EMGMEPF-----HISKAAQELRDVDVCIN  219 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHH---HTTSEEE-----EGGGHHHHTTTCSEEEE
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHH---HCCCeec-----ChhhHHHHhcCCCEEEE
Confidence            4688999995 9999999999999999999999986     2222121   1233332     23457777888999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.+.
T Consensus       220 ~~p~  223 (293)
T 3d4o_A          220 TIPA  223 (293)
T ss_dssp             CCSS
T ss_pred             CCCh
Confidence            8863

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.98  E-value=1.2e-05  Score=56.70  Aligned_cols=99  Identities=22%  Similarity=0.213  Sum_probs=57.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC-CeEEEEe--CCCCCCchHHHHHhhhhcc--------CCeEEEEcccCChHHH
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQ--RPDIGLDIDKLQMLLSFKK--------QGAHLIEASFADHRSL   69 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~--r~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~   69 (124)
                      |+++++.|.||+|++|..+++.|.+.. .++..+.  ++..+..   ....-.+..        ....+...|.  .+  
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~---~~~~~~~~~~~~~p~~~~~~~v~~~~~--~~--   89 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKK---YKDAASWKQTETLPETEQDIVVQECKP--EG--   89 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB---HHHHCCCCCSSCCCHHHHTCBCEESSS--CT--
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCC---HHHhcccccccccccccccceEEeCch--hh--
Confidence            666789999999999999999888876 4665443  3221111   111101100        1122222221  11  


Q ss_pred             HHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           70 VEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        70 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                        .++++|+||.+.+        .......++.+.+.| + ++|-.|+.
T Consensus        90 --~~~~~Dvvf~alp--------~~~s~~~~~~~~~~G-~-~VIDlSa~  126 (381)
T 3hsk_A           90 --NFLECDVVFSGLD--------ADVAGDIEKSFVEAG-L-AVVSNAKN  126 (381)
T ss_dssp             --TGGGCSEEEECCC--------HHHHHHHHHHHHHTT-C-EEEECCST
T ss_pred             --hcccCCEEEECCC--------hhHHHHHHHHHHhCC-C-EEEEcCCc
Confidence              2468999999987        333566777777788 3 56666643

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.97  E-value=1.7e-05  Score=55.51  Aligned_cols=75  Identities=11%  Similarity=0.205  Sum_probs=48.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-c----CCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-K----QGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .|+|.|.|+ |..|.+++..|++.|++|++.+|++     ...+.+.... .    +++.+ ...+.-..++.++++++|
T Consensus        29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~-----~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aD  101 (356)
T 3k96_A           29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSYES-----DHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVT  101 (356)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCH-----HHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCC
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCC
Confidence            578999995 9999999999999999999999986     2222221110 0    11111 111111134566778899


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +||.+.+
T Consensus       102 vVilaVp  108 (356)
T 3k96_A          102 DILIVVP  108 (356)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9988876

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.97  E-value=5.1e-05  Score=51.24  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=30.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.| .|.+|..++..|.+.|++|++.+|++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSP   34 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            6899998 59999999999999999999999987

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.97  E-value=2.6e-05  Score=55.62  Aligned_cols=69  Identities=22%  Similarity=0.274  Sum_probs=53.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++++++|.|+ |.+|+.+++.+.+.|++|++++.++..+.    ...      .-+.+..|+.|.+.+.++.+++|+|+.
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~----~~~------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA----GAV------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH----HHH------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch----hhh------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            4578999985 89999999999999999999877652211    111      114667899999999999999999885

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.96  E-value=4.6e-05  Score=54.80  Aligned_cols=97  Identities=21%  Similarity=0.294  Sum_probs=59.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc----CCeE-EE-----EcccCChHHHHHHh
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK----QGAH-LI-----EASFADHRSLVEAV   73 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~----~~~~-~~-----~~D~~~~~~~~~~~   73 (124)
                      -++.+.| .|++|..++..|++.|++|++.+|++.     +.+.+..-..    ++++ .+     .+.+.-..++.+++
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~-----kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~   82 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDAR-----KIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV   82 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCST-----THHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence            3678898 599999999999999999999999982     2222211000    0100 00     01111123456677


Q ss_pred             cccCEEEEeCcccc---ceecchHHHHHHHHHHHHh
Q 033236           74 KRVDVVICTISGVH---FRSHNILMQLKLVDAIREA  106 (124)
Q Consensus        74 ~~~d~vi~~a~~~~---~~~~~~~~~~~~~~~~~~~  106 (124)
                      +++|++|.+.+...   ...++....+.+++.+.+.
T Consensus        83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~  118 (446)
T 4a7p_A           83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAEN  118 (446)
T ss_dssp             TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHS
T ss_pred             hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHh
Confidence            88999999875321   3345666667777766654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.96  E-value=5.2e-06  Score=60.74  Aligned_cols=34  Identities=21%  Similarity=0.412  Sum_probs=29.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+|| |++|++++..|++.|++|++..|+.
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~  397 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTY  397 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            567999998 7999999999999999999999986

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.95  E-value=2.7e-05  Score=52.80  Aligned_cols=70  Identities=21%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++++|+|+ |+.|++++..|.+.|. +|++..|++    +...+..+.+.. ..+.....  .+   +   .+++|+|
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~----~~a~~la~~~~~~~~~~~~~~--~~---l---~~~aDiI  191 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTF----AKAEQLAELVAAYGEVKAQAF--EQ---L---KQSYDVI  191 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSH----HHHHHHHHHHGGGSCEEEEEG--GG---C---CSCEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCH----HHHHHHHHHhhccCCeeEeeH--HH---h---cCCCCEE
Confidence            4678999997 8999999999999995 999999987    222222222221 12333322  11   1   1578999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ||+.+
T Consensus       192 InaTp  196 (281)
T 3o8q_A          192 INSTS  196 (281)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            99764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.94  E-value=6.3e-05  Score=50.76  Aligned_cols=71  Identities=20%  Similarity=0.279  Sum_probs=47.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |+.|++++..|.+.|. +|++..|++    +...+..+.+...++....  +.+   +..  .++|+||
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~----~~a~~la~~~~~~~~~~~~--~~~---l~~--~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM----AKALALRNELDHSRLRISR--YEA---LEG--QSFDIVV  186 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH----HHHHHHHHHHCCTTEEEEC--SGG---GTT--CCCSEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhccCCeeEee--HHH---hcc--cCCCEEE
Confidence            3678999996 8999999999999995 999999987    2222323332222233332  222   222  6799999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      |+.+
T Consensus       187 naTp  190 (272)
T 3pwz_A          187 NATS  190 (272)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.94  E-value=5.2e-05  Score=54.24  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=31.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+|++|.+|...++.+...|.+|+++++++
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~  255 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA  255 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            56899999999999999999999999999998765

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.94  E-value=3.3e-05  Score=55.30  Aligned_cols=108  Identities=18%  Similarity=0.143  Sum_probs=60.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC----CeE-EE---EcccCChHHHHHHhc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ----GAH-LI---EASFADHRSLVEAVK   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~----~~~-~~---~~D~~~~~~~~~~~~   74 (124)
                      .|+|.|.| .|++|..++..|++ |++|+++++++     .+.+.+..-..+    +++ .+   ...+.-..++.++++
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~-----~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~  108 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQ-----AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR  108 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCH-----HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCH-----HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence            46899998 59999999999988 99999999987     222222110000    000 00   001111234556778


Q ss_pred             ccCEEEEeCccccc---eecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           75 RVDVVICTISGVHF---RSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        75 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      ++|+||.+.+....   ...+......+++.+.+.++-.-+|..|+
T Consensus       109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~ST  154 (432)
T 3pid_A          109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKST  154 (432)
T ss_dssp             TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSC
T ss_pred             CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            89999998763210   12344445555555544331133444443

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.94  E-value=9.3e-05  Score=50.83  Aligned_cols=69  Identities=19%  Similarity=0.263  Sum_probs=47.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCChHHHHH-HhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFADHRSLVE-AVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~-~~~~~d   77 (124)
                      +.|++.|.| .|.+|..+++.|.+.|+  +|++.+|++     ...+....   .++. ....      ++.+ +++++|
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~-----~~~~~a~~---~G~~~~~~~------~~~~~~~~~aD   96 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP-----ESISKAVD---LGIIDEGTT------SIAKVEDFSPD   96 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH-----HHHHHHHH---TTSCSEEES------CTTGGGGGCCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCH-----HHHHHHHH---CCCcchhcC------CHHHHhhccCC
Confidence            347899999 69999999999999998  999999986     22222222   2221 1111      2234 567899


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +||.+.++
T Consensus        97 vVilavp~  104 (314)
T 3ggo_A           97 FVMLSSPV  104 (314)
T ss_dssp             EEEECSCG
T ss_pred             EEEEeCCH
Confidence            99998874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.94  E-value=0.00016  Score=50.29  Aligned_cols=76  Identities=13%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHH----Hhc--c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVE----AVK--R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----~~~--~   75 (124)
                      +.+++|+|+ |.+|...++.+...|.+ |+++++++     .+.+....+ ...+.....|-.+.+++.+    +..  +
T Consensus       180 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          180 GDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDE-----GRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCH-----HHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCC
Confidence            568999998 99999999988889986 88888876     555555555 3333334444444444433    332  5


Q ss_pred             cCEEEEeCcc
Q 033236           76 VDVVICTISG   85 (124)
Q Consensus        76 ~d~vi~~a~~   85 (124)
                      +|+++.+.|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            8999999983

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.94  E-value=0.00018  Score=52.20  Aligned_cols=77  Identities=13%  Similarity=0.308  Sum_probs=49.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |.+|+|.|+| .|.+|..++..|.+.|++|++.+|++     .+.+.+......+..+..  ..+.+++.+.++++|+|+
T Consensus         2 ~~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~-----~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVi   73 (484)
T 4gwg_A            2 NAQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTV-----SKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRII   73 (484)
T ss_dssp             -CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSST-----HHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEE
T ss_pred             CCCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEE
Confidence            4567899999 59999999999999999999999987     222222211111111111  134444444445688888


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      .+.+.
T Consensus        74 l~Vp~   78 (484)
T 4gwg_A           74 LLVKA   78 (484)
T ss_dssp             ECSCS
T ss_pred             EecCC
Confidence            77754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.94  E-value=0.00011  Score=49.95  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=31.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|.||.|.+|..++..|.+.|++|++.+|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            35799999889999999999999999999999876

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.93  E-value=2.8e-05  Score=55.86  Aligned_cols=75  Identities=19%  Similarity=0.334  Sum_probs=50.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc---cc--------CCh-----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA---SF--------ADH-----   66 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---D~--------~~~-----   66 (124)
                      +.+++|+|++|.+|...++.+...|.+|+++++++     .+.+.+..+...  .++..   |+        .++     
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~-----~~~~~~~~lGa~--~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSP-----QKAEICRAMGAE--AIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHTCC--EEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhCCc--EEEecCcCcccccccccccchHHHHH
Confidence            56899999999999999999988999999998765     444444333211  12211   11        111     


Q ss_pred             --HHHHHHhc--ccCEEEEeCc
Q 033236           67 --RSLVEAVK--RVDVVICTIS   84 (124)
Q Consensus        67 --~~~~~~~~--~~d~vi~~a~   84 (124)
                        +.+.++..  ++|+++.++|
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCC
Confidence              34444443  6999999998

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.91  E-value=4.6e-05  Score=51.98  Aligned_cols=106  Identities=13%  Similarity=0.103  Sum_probs=66.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ||+.|+|+ |.+|+.++..|..++  -++.+++.++....-...+....  ...........+  |.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            68999995 999999999998876  47888888752111122222221  112233333322  22    257789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +..||..+        .+..|..-.+.+.+++.+..+-..++.+|
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99998442        24567777888888988877323344444

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=97.90  E-value=3.4e-05  Score=54.72  Aligned_cols=101  Identities=13%  Similarity=0.134  Sum_probs=57.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEE-----------EcccCChHHHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI-----------EASFADHRSLVEA   72 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~~D~~~~~~~~~~   72 (124)
                      |++.|.|+ |++|..++..|++ |++|++++|++     .+.+.+   ......+.           ..++.-..+..++
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~-----~~~~~l---~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~   70 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILP-----SKVDKI---NNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA   70 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCH-----HHHHHH---HTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCH-----HHHHHH---HcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence            47899985 9999999999999 99999999986     222222   11111000           0001101123345


Q ss_pred             hcccCEEEEeCcccc---ceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           73 VKRVDVVICTISGVH---FRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        73 ~~~~d~vi~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      .+++|++|.+.+...   ....+......+++.+.+.+ ...+|..
T Consensus        71 ~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~-~~~iVV~  115 (402)
T 1dlj_A           71 YKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVN-SHATLII  115 (402)
T ss_dssp             HHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHC-SSCEEEE
T ss_pred             hcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhC-CCCEEEE
Confidence            567999999887531   11233334555555554433 3445544

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.90  E-value=0.00019  Score=49.90  Aligned_cols=100  Identities=21%  Similarity=0.158  Sum_probs=59.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCC-CCCchHHH-HHhhhhccC-CeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPD-IGLDIDKL-QMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~-~~~~~~~~-~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++.|.||+|++|+.+++.|.+. ..++..+..++ +...-+.. +..+.+... ...+...  .+++   ++.+++|+|
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dvv   79 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDVV   79 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCEE
Confidence            68999999999999999999885 46776664332 11111111 111112221 2233222  0222   233689999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |.|.+        .......++.+.+.| + ++|-.|+.
T Consensus        80 f~a~p--------~~~s~~~~~~~~~~g-~-~vIDlSa~  108 (337)
T 3dr3_A           80 FLATA--------HEVSHDLAPQFLEAG-C-VVFDLSGA  108 (337)
T ss_dssp             EECSC--------HHHHHHHHHHHHHTT-C-EEEECSST
T ss_pred             EECCC--------hHHHHHHHHHHHHCC-C-EEEEcCCc
Confidence            99887        333567777777888 4 56666643

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.88  E-value=2.9e-05  Score=52.58  Aligned_cols=66  Identities=23%  Similarity=0.349  Sum_probs=44.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|++.|.| .|.+|..++..|.+.|++|.+.+|++     .+.+...   ..++..    .   ++..++++++|+|+.+
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~-----~~~~~~~---~~g~~~----~---~~~~~~~~~~D~vi~~   68 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNP-----EAIADVI---AAGAET----A---STAKAIAEQCDVIITM   68 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH-----HHHHHHH---HTTCEE----C---SSHHHHHHHCSEEEEC
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCH-----HHHHHHH---HCCCee----c---CCHHHHHhCCCEEEEE
Confidence            36899999 59999999999999999999998886     2222221   122221    1   1233445567888877


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        69 v~   70 (299)
T 1vpd_A           69 LP   70 (299)
T ss_dssp             CS
T ss_pred             CC
Confidence            75

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.88  E-value=0.00014  Score=44.19  Aligned_cols=34  Identities=26%  Similarity=0.391  Sum_probs=28.6

Q ss_pred             CceEEEEccC---ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            3 KSKVLVVGGT---GYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~---g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .+++.|.|++   |.+|..+++.|.+.|++|+.+.++
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~   50 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   50 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence            5689999986   889999999999999986666554

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.88  E-value=0.00016  Score=49.61  Aligned_cols=100  Identities=19%  Similarity=0.155  Sum_probs=60.5

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |. ++++.|+|+ |.+|..++..|++.|+ +|++.++++...+....+....  .......+...  +|   + ++++++
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~~a   73 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADISGS   73 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCC
Confidence            44 368999997 9999999999999997 9999999873222111111111  01111111111  12   2 457889


Q ss_pred             CEEEEeCccccce--------ecchHHHHHHHHHHHHhC
Q 033236           77 DVVICTISGVHFR--------SHNILMQLKLVDAIREAG  107 (124)
Q Consensus        77 d~vi~~a~~~~~~--------~~~~~~~~~~~~~~~~~~  107 (124)
                      |+||.++|.....        ..|....+.+++.+.+..
T Consensus        74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~  112 (317)
T 2ewd_A           74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC  112 (317)
T ss_dssp             SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC
Confidence            9999998643211        234455667777777665

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.87  E-value=0.00037  Score=48.31  Aligned_cols=73  Identities=23%  Similarity=0.267  Sum_probs=49.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC----hHHHHHHhc----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD----HRSLVEAVK----   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~----   74 (124)
                      +.+++|+|+ |.+|...++.+...|.+|+++++++     .+.+....+...  .++  |..+    .+.+.+...    
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~--~~~--~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSP-----RRLEVAKNCGAD--VTL--VVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTTCS--EEE--ECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCH-----HHHHHHHHhCCC--EEE--cCcccccHHHHHHHHhccccC
Confidence            568999996 9999999998888999998888876     333444332211  222  3332    345555543    


Q ss_pred             -ccCEEEEeCcc
Q 033236           75 -RVDVVICTISG   85 (124)
Q Consensus        75 -~~d~vi~~a~~   85 (124)
                       ++|+++.++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence             59999999983

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.86  E-value=1.4e-05  Score=52.12  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=31.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEE-EeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~-~~r~~   37 (124)
                      |++|++.|.| +|.+|..++..|.+.|++|++ .+|++
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~   57 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGP   57 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence            4567999999 699999999999999999988 77776

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.86  E-value=2.7e-05  Score=53.91  Aligned_cols=73  Identities=25%  Similarity=0.416  Sum_probs=48.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHhc--ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAVK--RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~v   79 (124)
                      +.+++|+||+|.+|...++.+...|.+|+++ +++     .+.+....+   +...+. +-.+ .+.+.+...  ++|++
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~-----~~~~~~~~l---Ga~~i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG-----SDLEYVRDL---GATPID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH-----HHHHHHHHH---TSEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH-----HHHHHHHHc---CCCEec-cCCCHHHHHHHHhcCCCceEE
Confidence            5689999999999999999999999999888 554     333333332   333332 2222 233344333  58999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      +.++|.
T Consensus       221 id~~g~  226 (343)
T 3gaz_A          221 YDTLGG  226 (343)
T ss_dssp             EESSCT
T ss_pred             EECCCc
Confidence            999883

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.86  E-value=5.4e-05  Score=52.21  Aligned_cols=100  Identities=16%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |+ ++++.|+|+ |.+|..++..|+..|. +|.++++++...+....+.....  ......+...     .++ ++++++
T Consensus         1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-----~d~-~al~~a   73 (322)
T 1t2d_A            1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-----NTY-DDLAGA   73 (322)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-----CCG-GGGTTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-----CCH-HHhCCC
Confidence            44 468999997 9999999999999997 88888887632211111111111  1112122211     123 568899


Q ss_pred             CEEEEeCccccc-------------eecchHHHHHHHHHHHHhC
Q 033236           77 DVVICTISGVHF-------------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        77 d~vi~~a~~~~~-------------~~~~~~~~~~~~~~~~~~~  107 (124)
                      |+||.++|...-             ...|..-.+.+++.+.+..
T Consensus        74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~  117 (322)
T 1t2d_A           74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC  117 (322)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999863321             1123445667777777765

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.86  E-value=0.00026  Score=48.93  Aligned_cols=106  Identities=19%  Similarity=0.224  Sum_probs=64.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      +.++|.|+|+ |.+|..++..|+..+.  ++.++++++...+....+...... ..++.+.. |  +    .++++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            3478999998 9999999999988774  889999865111111111111110 12333332 2  2    345889999


Q ss_pred             EEEeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           79 VICTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        79 vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      ||..+|...-        ...|....+.+++.+.+..+-..++..
T Consensus        80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (326)
T 2zqz_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            9999975422        224556677788888777632334443

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.85  E-value=0.00014  Score=49.92  Aligned_cols=97  Identities=19%  Similarity=0.311  Sum_probs=60.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++.|+|+ |.+|..++..+...|  .+|.++++++........+......  .....+.. |  +    .++++++|+
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aDv   77 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDADL   77 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCSE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCCE
Confidence            468999998 999999999998877  4899999886211111112111111  11333332 1  2    245889999


Q ss_pred             EEEeCccccc--------eecchHHHHHHHHHHHHhC
Q 033236           79 VICTISGVHF--------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        79 vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~  107 (124)
                      ||.+++....        ...|..-...+++.+.+..
T Consensus        78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  114 (316)
T 1ldn_A           78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG  114 (316)
T ss_dssp             EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC
Confidence            9999875432        2344555677777777765

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.85  E-value=4.8e-05  Score=50.70  Aligned_cols=68  Identities=19%  Similarity=0.356  Sum_probs=45.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|++.|.|+ |.+|..++..|.+.|++ |.+.+|++     ...+....  ..++.. ..      ++.++++++|+|+.
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~-----~~~~~~~~--~~g~~~-~~------~~~~~~~~~Dvvi~   74 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTE-----ESARELAQ--KVEAEY-TT------DLAEVNPYAKLYIV   74 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSH-----HHHHHHHH--HTTCEE-ES------CGGGSCSCCSEEEE
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCH-----HHHHHHHH--HcCCce-eC------CHHHHhcCCCEEEE
Confidence            468999995 99999999999999988 78888876     22222211  113332 11      23345668999999


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.++
T Consensus        75 av~~   78 (266)
T 3d1l_A           75 SLKD   78 (266)
T ss_dssp             CCCH
T ss_pred             ecCH
Confidence            8863

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=97.85  E-value=5.9e-05  Score=54.71  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=48.0

Q ss_pred             CCCceEEEEccCC-hhcHHHHHHHhhC----CCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHH
Q 033236            1 MGKSKVLVVGGTG-YIGRRIVKASLAQ----GHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         1 m~~~~ili~Ga~g-~iG~~l~~~l~~~----g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      |++++|.|.||.+ +.|.+++..|+..    +.+|.+.++++...+. ..+.....   ......+..     ..++.++
T Consensus         1 m~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~-~~~~~~~~l~~~~~~~~I~~-----ttD~~ea   74 (480)
T 1obb_A            1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA-ILTIAKKYVEEVGADLKFEK-----TMNLDDV   74 (480)
T ss_dssp             -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH-HHHHHHHHHHHTTCCCEEEE-----ESCHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCcEEEE-----ECCHHHH
Confidence            6678999999855 4678888888753    7899999998722111 11111111   111222221     1335667


Q ss_pred             hcccCEEEEeCcc
Q 033236           73 VKRVDVVICTISG   85 (124)
Q Consensus        73 ~~~~d~vi~~a~~   85 (124)
                      ++++|+||..++.
T Consensus        75 l~dAD~VIiaagv   87 (480)
T 1obb_A           75 IIDADFVINTAMV   87 (480)
T ss_dssp             HTTCSEEEECCCT
T ss_pred             hCCCCEEEECCCc
Confidence            8899999999963

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.84  E-value=6.2e-05  Score=53.39  Aligned_cols=73  Identities=26%  Similarity=0.444  Sum_probs=51.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |.+|+.+++.+...|. +|++.+|++    ....+....+   +...  .+   .+++.+++.++|+||
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~----~ra~~la~~~---g~~~--~~---~~~l~~~l~~aDvVi  232 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY----ERAVELARDL---GGEA--VR---FDELVDHLARSDVVV  232 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH----HHHHHHHHHH---TCEE--CC---GGGHHHHHHTCSEEE
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHc---CCce--ec---HHhHHHHhcCCCEEE
Confidence            4678999997 9999999999999997 999999986    1111222222   2222  22   235666778899999


Q ss_pred             EeCcccc
Q 033236           81 CTISGVH   87 (124)
Q Consensus        81 ~~a~~~~   87 (124)
                      .+.+...
T Consensus       233 ~at~~~~  239 (404)
T 1gpj_A          233 SATAAPH  239 (404)
T ss_dssp             ECCSSSS
T ss_pred             EccCCCC
Confidence            9987443

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.83  E-value=7.2e-05  Score=52.98  Aligned_cols=71  Identities=25%  Similarity=0.362  Sum_probs=54.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |++++++|.|+ |.+|+.+++.+.+.|+++++++ ++..+...    .    ......+.+|+.|.+.+.++.+.+|+++
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~----~----ad~~~~~~~~~~d~~~l~~~a~~~d~i~   91 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQ----I----SAHDGHVTGSFKEREAVRQLAKTCDVVT   91 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGG----G----CCSSCCEESCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHH----h----ccccceeecCCCCHHHHHHHHHhCCEEE
Confidence            34678999996 8999999999999999999999 65322111    0    1112467889999999999999999876


Q ss_pred             E
Q 033236           81 C   81 (124)
Q Consensus        81 ~   81 (124)
                      .
T Consensus        92 ~   92 (403)
T 3k5i_A           92 A   92 (403)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.82  E-value=0.00028  Score=48.60  Aligned_cols=105  Identities=18%  Similarity=0.201  Sum_probs=64.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .++|.|+|+ |.+|..++..|+..+.  ++.++++++...+....+...... ..++.+.. |  +    .++++++|+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            368999998 9999999999988774  899999865111111111111110 12333332 2  2    3458899999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      |..+|...        ....|....+.+++.+.+..+-..++..
T Consensus        77 ii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  120 (318)
T 1ez4_A           77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (318)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99997542        1234566777788888877632234443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.81  E-value=8.9e-05  Score=51.86  Aligned_cols=74  Identities=16%  Similarity=0.260  Sum_probs=48.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh--cccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV--KRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi   80 (124)
                      +.+++|+||+|.+|...++.+...|.+|+++++ +     .+.+.+..+   +... ..|..+.+..+++.  .++|+++
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~-----~~~~~~~~l---Ga~~-v~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-Q-----DASELVRKL---GADD-VIDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-G-----GGHHHHHHT---TCSE-EEETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-h-----HHHHHHHHc---CCCE-EEECCchHHHHHHhhcCCCCEEE
Confidence            468999999999999999999889999988773 3     222333222   2221 12454443333333  4699999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      .++|..
T Consensus       254 d~~g~~  259 (375)
T 2vn8_A          254 DNVGGS  259 (375)
T ss_dssp             ESSCTT
T ss_pred             ECCCCh
Confidence            998743

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.80  E-value=0.00019  Score=49.91  Aligned_cols=101  Identities=17%  Similarity=0.130  Sum_probs=62.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC------------------CCchHHHHHhhhhccCC--eEEEEc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI------------------GLDIDKLQMLLSFKKQG--AHLIEA   61 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~------------------~~~~~~~~~~~~~~~~~--~~~~~~   61 (124)
                      +.+++|.|+ |++|..+++.|+..| -++++++++.-                  .......+.+..+ .+.  ++.+..
T Consensus        34 ~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i-nP~v~v~~~~~  111 (340)
T 3rui_A           34 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-FPLMDATGVKL  111 (340)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH-CTTCEEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh-CCCCEEEEEec
Confidence            468999995 999999999999999 57888876531                  0111122222222 233  444444


Q ss_pred             cc--------------CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEE
Q 033236           62 SF--------------ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKL  114 (124)
Q Consensus        62 D~--------------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  114 (124)
                      ++              .+.+.+..++++.|+|+.+.....       .-..+-+.|.+.+  +.+|.
T Consensus       112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-------tR~lin~~c~~~~--~plI~  169 (340)
T 3rui_A          112 SIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-------SRWLPSLLSNIEN--KTVIN  169 (340)
T ss_dssp             CCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-------GGHHHHHHHHHTT--CEEEE
T ss_pred             cccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-------HHHHHHHHHHHcC--CcEEE
Confidence            33              134556778889999999875321       2234566777776  34544

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.80  E-value=5e-05  Score=51.26  Aligned_cols=33  Identities=18%  Similarity=0.315  Sum_probs=30.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.|.| .|.+|..++..|++.|++|++.+|++
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNP   34 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            5799998 59999999999999999999999987

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.79  E-value=0.00011  Score=50.25  Aligned_cols=69  Identities=14%  Similarity=0.147  Sum_probs=45.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+|.|+| .|.+|..++..|.+.|+ +|++.+|++   .+.+.+...   ..++..       .++..++++++|+||.
T Consensus        24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~---~~~~~~~~~---~~g~~~-------~~~~~e~~~~aDvVi~   89 (312)
T 3qsg_A           24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAAS---AESWRPRAE---ELGVSC-------KASVAEVAGECDVIFS   89 (312)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSC---HHHHHHHHH---HTTCEE-------CSCHHHHHHHCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCC---CHHHHHHHH---HCCCEE-------eCCHHHHHhcCCEEEE
Confidence            46899998 49999999999999999 999999973   012222221   223222       1234455567888888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      +.++
T Consensus        90 ~vp~   93 (312)
T 3qsg_A           90 LVTA   93 (312)
T ss_dssp             CSCT
T ss_pred             ecCc
Confidence            7764

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.78  E-value=0.00019  Score=52.09  Aligned_cols=36  Identities=25%  Similarity=0.401  Sum_probs=31.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++++|.|+|+ |.+|..++..|++.|++|.+.+|++
T Consensus        13 ~~~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~   48 (480)
T 2zyd_A           13 MSKQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSR   48 (480)
T ss_dssp             --CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred             cCCCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            67788999985 9999999999999999999999986

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.78  E-value=7.1e-05  Score=51.74  Aligned_cols=72  Identities=18%  Similarity=0.182  Sum_probs=48.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHh-cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAV-KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~d   77 (124)
                      +.+++|+|+ |.+|...++.+...|. +|+++++++     .+.+....+    ... ..|..+.+   .+.++. .++|
T Consensus       165 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~-----~~~~~~~~l----a~~-v~~~~~~~~~~~~~~~~~~g~D  233 (343)
T 2dq4_A          165 GKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNP-----YRLAFARPY----ADR-LVNPLEEDLLEVVRRVTGSGVE  233 (343)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH-----HHHGGGTTT----CSE-EECTTTSCHHHHHHHHHSSCEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHh----HHh-ccCcCccCHHHHHHHhcCCCCC
Confidence            468999999 9999999998888998 999999876     333333222    211 23444432   233322 2589


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +++.++|.
T Consensus       234 ~vid~~g~  241 (343)
T 2dq4_A          234 VLLEFSGN  241 (343)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999983

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.78  E-value=0.00023  Score=49.66  Aligned_cols=102  Identities=17%  Similarity=0.148  Sum_probs=66.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      ..+|+|.|+ |++|..+++.|+..| -++++++++.-+                  ......+.+..+. .-.++.+..+
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  196 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALN  196 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecc
Confidence            468999995 999999999999999 488888876311                  1111222222222 2346677778


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchH-HHHHHHHHHHHhCCccEEEEe
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNIL-MQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +++..++.. +++.|+|+.+..       |.. .-..+-++|.+.+ + .+|+.
T Consensus       197 i~~~~~~~~-~~~~DlVvd~~D-------n~~~~r~~ln~~c~~~~-~-p~i~~  240 (353)
T 3h5n_A          197 INDYTDLHK-VPEADIWVVSAD-------HPFNLINWVNKYCVRAN-Q-PYINA  240 (353)
T ss_dssp             CCSGGGGGG-SCCCSEEEECCC-------CSTTHHHHHHHHHHHTT-C-CEEEE
T ss_pred             cCchhhhhH-hccCCEEEEecC-------ChHHHHHHHHHHHHHhC-C-CEEEE
Confidence            877665666 889999998764       222 2334557777777 3 44443

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.78  E-value=0.00018  Score=49.40  Aligned_cols=35  Identities=9%  Similarity=0.003  Sum_probs=31.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      |+|+|.|.| .|.+|..++..|++.| ++|++.+|++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            347899999 5999999999999999 9999999986

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.77  E-value=5.2e-05  Score=53.43  Aligned_cols=72  Identities=22%  Similarity=0.342  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc------------------C
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF------------------A   64 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------~   64 (124)
                      +.+++|+|+ |.+|...++.+...|.+|++++|++     .+.+....   .+..++..|.                  .
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~-----~~l~~~~~---lGa~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRP-----EVAEQVRS---VGAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSG-----GGHHHHHH---TTCEECCCC-------------CHHHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH---cCCeEEeccccccccccchhhhhHHHHhh
Confidence            468999996 9999999999999999999999987     22222222   2333333221                  1


Q ss_pred             ChHHHHHHhcccCEEEEeC
Q 033236           65 DHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus        65 ~~~~~~~~~~~~d~vi~~a   83 (124)
                      +.+++.++++++|+||.++
T Consensus       255 ~~~~l~e~l~~aDIVI~tv  273 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTA  273 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECC
T ss_pred             hHHHHHHHHhcCCEEEECC
Confidence            2457888889999999876

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.77  E-value=0.00056  Score=46.71  Aligned_cols=100  Identities=22%  Similarity=0.241  Sum_probs=61.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhcc-----CCeEEEEcccCChHHHHHHhccc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKK-----QGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |++.|+|+ |.+|..++..|+..|+  +|.++++++    .........+.+     ....+..   .+.    +.++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~----~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~a   68 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDE----DRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADA   68 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH----HHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCC
Confidence            57999997 9999999999999998  999999986    111111111111     1222222   122    457899


Q ss_pred             CEEEEeCccccc--------eecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           77 DVVICTISGVHF--------RSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        77 d~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      |+||.+++....        ...|....+.+++.+.+.. .+ .++..|
T Consensus        69 DvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~t  116 (304)
T 2v6b_A           69 QVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTS  116 (304)
T ss_dssp             SEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECS
T ss_pred             CEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEec
Confidence            999999864321        2246666777888887775 34 344434

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.75  E-value=6.9e-05  Score=52.43  Aligned_cols=73  Identities=21%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++|+|+ |.+|...++.+...|.+|+++++++     .+.+.+..+.   ... ..|..+.+.+.++..++|+++.+
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~-----~~~~~a~~lG---a~~-vi~~~~~~~~~~~~~g~Dvvid~  264 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE-----AKREAAKALG---ADE-VVNSRNADEMAAHLKSFDFILNT  264 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHT---CSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHcC---CcE-EeccccHHHHHHhhcCCCEEEEC
Confidence            568999997 8899999998888899999999876     3333333322   221 23555665555555679999999


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      +|.
T Consensus       265 ~g~  267 (369)
T 1uuf_A          265 VAA  267 (369)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            884

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.75  E-value=0.00031  Score=47.99  Aligned_cols=96  Identities=19%  Similarity=0.349  Sum_probs=58.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++.|+| +|.+|..++..|++.|  ++|++++|++...+....+....  .....+.....   +   . +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCEE
Confidence            6899999 6999999999999998  79999999862111111110000  01122333222   2   2 356789999


Q ss_pred             EEeCccccc------------eecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVHF------------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~~------------~~~~~~~~~~~~~~~~~~~  107 (124)
                      |.+++....            ...|..-...+++.+.+..
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~  113 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG  113 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            999875331            1134444567777776654

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.75  E-value=0.00018  Score=50.51  Aligned_cols=69  Identities=23%  Similarity=0.282  Sum_probs=53.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|.|+ |.+|+.+++.+.+.|++|++++.++..+..          ...-..+..|+.|.+.+.++.+.+|++..
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~----------~~ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA----------QVADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT----------TTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH----------HhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence            3568999985 889999999999999999999877522110          11123566899999999999999998754

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.74  E-value=0.0001  Score=49.18  Aligned_cols=65  Identities=26%  Similarity=0.345  Sum_probs=47.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      +++|+|+ |+.|++++..|.+.|. +|++..|++        ++.+.+.. .+...     ..+++.++.+++|+||++.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~--------~ka~~la~-~~~~~-----~~~~~~~~~~~aDiVInat  174 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTI--------ERAKALDF-PVKIF-----SLDQLDEVVKKAKSLFNTT  174 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCH--------HHHHTCCS-SCEEE-----EGGGHHHHHHTCSEEEECS
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHH-HcccC-----CHHHHHhhhcCCCEEEECC
Confidence            7899996 9999999999999997 999999987        22222221 12221     2345667788899999976


Q ss_pred             c
Q 033236           84 S   84 (124)
Q Consensus        84 ~   84 (124)
                      +
T Consensus       175 p  175 (253)
T 3u62_A          175 S  175 (253)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.74  E-value=0.00027  Score=49.61  Aligned_cols=93  Identities=15%  Similarity=0.198  Sum_probs=56.3

Q ss_pred             ceEEEEccCChhcHHHHH-HHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVK-ASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~-~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++.|.||+|++|+.+++ .|.+.++   .++.+..++.+.      ..+.+....+.+  .|..+++.    ++++|+|
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~------~v~~~~g~~i~~--~~~~~~~~----~~~~DvV   69 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ------AAPSFGGTTGTL--QDAFDLEA----LKALDII   69 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS------BCCGGGTCCCBC--EETTCHHH----HHTCSEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC------CccccCCCceEE--EecCChHH----hcCCCEE
Confidence            689999999999999999 4555543   555554433221      111111222222  23334444    3589999


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCcc-EEEEecC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVK-KRKLNEG  117 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss  117 (124)
                      |.+.|        .......++.+.+.| .+ .+|-.|+
T Consensus        70 f~a~g--------~~~s~~~a~~~~~~G-~k~vVID~ss   99 (367)
T 1t4b_A           70 VTCQG--------GDYTNEIYPKLRESG-WQGYWIDAAS   99 (367)
T ss_dssp             EECSC--------HHHHHHHHHHHHHTT-CCCEEEECSS
T ss_pred             EECCC--------chhHHHHHHHHHHCC-CCEEEEcCCh
Confidence            99988        444667778888888 54 4444444

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.73  E-value=0.00011  Score=49.97  Aligned_cols=34  Identities=24%  Similarity=0.303  Sum_probs=31.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +|++.|.| .|.+|..++..|.+.|++|++.+|++
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~   40 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNP   40 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCH
Confidence            46899998 59999999999999999999999987

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.73  E-value=6.2e-05  Score=51.88  Aligned_cols=81  Identities=20%  Similarity=0.215  Sum_probs=53.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++++|.|++.-+|+.+++.|...|..|++..|+...    .....+.+............++++++.+.+.++|+||.
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~----l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs  251 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ----KFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  251 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE----EEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHH----HHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence            46899999987788999999999999999998887310    00000111111011111112445789999999999999


Q ss_pred             eCccc
Q 033236           82 TISGV   86 (124)
Q Consensus        82 ~a~~~   86 (124)
                      ..|..
T Consensus       252 Atg~p  256 (320)
T 1edz_A          252 GVPSE  256 (320)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            88743

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.73  E-value=3e-05  Score=53.71  Aligned_cols=106  Identities=13%  Similarity=0.127  Sum_probs=66.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhc-cCCeEEE-EcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLI-EASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~d~   78 (124)
                      .+++.|+|+ |.+|..++..++..|.  ++.++++++...+....+...... .....+. ..|+   +    .++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCCE
Confidence            468999998 9999999999999885  899999875221111112111111 1112222 2232   2    2788999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ||.++|..+        ....|..-.+.+++.+.+.++-..++.+|
T Consensus        93 VIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           93 VVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            999988432        23456677788888888876322344444

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.73  E-value=0.00017  Score=48.97  Aligned_cols=35  Identities=26%  Similarity=0.436  Sum_probs=28.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~   37 (124)
                      +++|.|.|++|.+|+.+++.+.+. +.++... +|++
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~   57 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKG   57 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            357999999999999999998765 6777665 5544

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.73  E-value=8.5e-05  Score=50.29  Aligned_cols=66  Identities=17%  Similarity=0.330  Sum_probs=44.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|++.|.| .|.+|..++..|.+.|++|++.+|++     .+.+..   ...++..    .   ++..++++++|+|+.+
T Consensus         4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~-----~~~~~~---~~~g~~~----~---~~~~~~~~~~D~vi~~   67 (301)
T 3cky_A            4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLME-----ANVAAV---VAQGAQA----C---ENNQKVAAASDIIFTS   67 (301)
T ss_dssp             CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSH-----HHHHHH---HTTTCEE----C---SSHHHHHHHCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHH---HHCCCee----c---CCHHHHHhCCCEEEEE
Confidence            46899998 59999999999999999999988876     222222   2223321    1   1233445567888877


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        68 vp   69 (301)
T 3cky_A           68 LP   69 (301)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=97.72  E-value=0.00084  Score=48.58  Aligned_cols=75  Identities=12%  Similarity=0.257  Sum_probs=47.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+.++|.|+| .|.+|..++..|.+.|++|.+.+|++     .+.+.... ....++..    ..+.+++.+..+++|+|
T Consensus         3 m~~~~IgvIG-~G~mG~~lA~~L~~~G~~V~v~dr~~-----~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvV   72 (474)
T 2iz1_A            3 MAQANFGVVG-MAVMGKNLALNVESRGYTVAIYNRTT-----SKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRI   72 (474)
T ss_dssp             CTTBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH-----HHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEE
T ss_pred             CCCCcEEEEe-eHHHHHHHHHHHHhCCCEEEEEcCCH-----HHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEE
Confidence            5567899998 49999999999999999999999886     22222211 11112221    12343333333348888


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      +.+...
T Consensus        73 ilavp~   78 (474)
T 2iz1_A           73 MLMVQA   78 (474)
T ss_dssp             EECCCT
T ss_pred             EEEccC
Confidence            888763

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.72  E-value=0.00021  Score=49.12  Aligned_cols=25  Identities=32%  Similarity=0.324  Sum_probs=23.1

Q ss_pred             ChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236           13 GYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus        13 g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |..|.++++++++.|++|+++.+..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCC
Confidence            7799999999999999999998864

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.72  E-value=0.0001  Score=48.92  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=32.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~   37 (124)
                      |++|++.|.|+ |.+|..++..|.+.|    ++|.+.+|++
T Consensus         2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~   41 (262)
T 2rcy_A            2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSK   41 (262)
T ss_dssp             CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence            66789999996 999999999999998    7999999887

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.72  E-value=7.2e-05  Score=49.50  Aligned_cols=35  Identities=34%  Similarity=0.475  Sum_probs=31.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+++.|+| .|.+|.+++..|++.|++|++.+|++
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            468899998 69999999999999999999999987

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.72  E-value=0.00045  Score=45.90  Aligned_cols=97  Identities=12%  Similarity=0.113  Sum_probs=59.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   77 (124)
                      |++.|.|++|.+|+.+++.+.+. ++++........+.+    ...    ..... +..|++.++...+..+     +.+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~----~~~----~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS----LLT----DGNTE-VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH----HHH----HTTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH----HHh----ccCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence            47999999999999999998765 799887655432211    111    11222 6778888876665443     578


Q ss_pred             EEEEeCccccceecchHHHHHHHHHHHHh-CCccEEEEecC
Q 033236           78 VVICTISGVHFRSHNILMQLKLVDAIREA-GNVKKRKLNEG  117 (124)
Q Consensus        78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss  117 (124)
                      +|+-..|..      ......+.+++.+. +  ..+++.+.
T Consensus        72 ~VigTTG~~------~e~~~~l~~aa~~~~~--~~vv~a~N  104 (245)
T 1p9l_A           72 AVVGTTGFT------AERFQQVESWLVAKPN--TSVLIAPN  104 (245)
T ss_dssp             EEECCCCCC------HHHHHHHHHHHHTSTT--CEEEECSC
T ss_pred             EEEcCCCCC------HHHHHHHHHHHHhCCC--CCEEEECC
Confidence            887766621      12223455555544 4  34566553

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.71  E-value=4.1e-05  Score=53.39  Aligned_cols=74  Identities=23%  Similarity=0.262  Sum_probs=50.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi   80 (124)
                      +++++|+|+ |.+|...++.+...|.+|+++++++..  ..+.+....   .++..+  | .+  .+.+.+.-.++|++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~---~ga~~v--~-~~~~~~~~~~~~~~~d~vi  251 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEE---TKTNYY--N-SSNGYDKLKDSVGKFDVII  251 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHH---HTCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHH---hCCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence            678999999 999999999998899999999987521  122233322   233444  4 43  233333224699999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      +++|.
T Consensus       252 d~~g~  256 (366)
T 2cdc_A          252 DATGA  256 (366)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.71  E-value=0.0001  Score=51.30  Aligned_cols=74  Identities=26%  Similarity=0.253  Sum_probs=52.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh-hhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL-SFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+.+++|+|+ |.+|...++.+...|.+|+++++++     .+.+... .+   +... ..|..+.+.+.++..++|+++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~-----~~~~~~~~~l---Ga~~-vi~~~~~~~~~~~~~g~D~vi  249 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSN-----KKREEALQDL---GADD-YVIGSDQAKMSELADSLDYVI  249 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESST-----THHHHHHTTS---CCSC-EEETTCHHHHHHSTTTEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCh-----HHHHHHHHHc---CCce-eeccccHHHHHHhcCCCCEEE
Confidence            3568999995 9999999998888899999999886     2222222 22   2221 134556666776666899999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      .++|.
T Consensus       250 d~~g~  254 (357)
T 2cf5_A          250 DTVPV  254 (357)
T ss_dssp             ECCCS
T ss_pred             ECCCC
Confidence            99874

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.71  E-value=0.00035  Score=47.70  Aligned_cols=34  Identities=18%  Similarity=0.280  Sum_probs=31.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++|-++| -|..|..+++.|++.|++|++.+|++
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~   36 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ   36 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence            46899998 59999999999999999999999987

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.69  E-value=3.5e-05  Score=52.89  Aligned_cols=76  Identities=17%  Similarity=0.266  Sum_probs=48.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeC--CCCCCchHHHHHhhhhcc-C--CeEEEEcccCChHHHHHHhcccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQR--PDIGLDIDKLQMLLSFKK-Q--GAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r--~~~~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++.|.|+ |.+|..++..|.+.|++|++++|  ++     .+.+.+..... .  +.+.......++++..++.+++|+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~   74 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT-----EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV   74 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH-----HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCH-----HHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence            47999985 99999999999999999999998  65     22222211100 0  111000012233356667788999


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      ||.+..+
T Consensus        75 vi~~v~~   81 (335)
T 1txg_A           75 VLLGVST   81 (335)
T ss_dssp             EEECSCG
T ss_pred             EEEcCCh
Confidence            9998874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.69  E-value=0.00016  Score=51.32  Aligned_cols=73  Identities=21%  Similarity=0.304  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcc----------------cCC-
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS----------------FAD-   65 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~~-   65 (124)
                      +.+++|+|+ |.+|...++.+...|.+|++.++++     .+.+....   .+..++..+                +++ 
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~-----~~l~~~~~---~G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRP-----AAKEQVAS---LGAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSST-----THHHHHHH---TTCEECCCCC-----------------CH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHH---cCCceeecccccccccccccchhhhcchh
Confidence            468999996 9999999999999999999999987     22233322   222232221                222 


Q ss_pred             -----hHHHHHHhcccCEEEEeCc
Q 033236           66 -----HRSLVEAVKRVDVVICTIS   84 (124)
Q Consensus        66 -----~~~~~~~~~~~d~vi~~a~   84 (124)
                           .+++.++++++|+||.++.
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvl  284 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTAL  284 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCc
Confidence                 3578888999999999864

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.69  E-value=0.00016  Score=50.91  Aligned_cols=34  Identities=21%  Similarity=0.271  Sum_probs=31.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+|+ |.+|...++.+...|.+|++.++++
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~  205 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA  205 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            578999995 9999999999999999999999887

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.68  E-value=9e-05  Score=50.62  Aligned_cols=34  Identities=32%  Similarity=0.495  Sum_probs=30.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .|++.|.| .|.+|..++..|.+.|++|++.+|++
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~   63 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTA   63 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            37899999 49999999999999999999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-15
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	7e-15
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	8e-14
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-10
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-10
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-09
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-07
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-07
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	7e-07
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	8e-07
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	3e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	6e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-05
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	4e-04
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	8e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	0.001
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	0.001
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.001
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.002
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	0.003
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	0.003
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	0.003
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.003
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.004
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.004
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	0.004
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.004
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.004

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 68/108 (62%), Positives = 88/108 (81%), Gaps = 1/108 (0%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           KS+VL+VGGTGYIG+RIV AS++ GH TYVL RP++  +IDK+QMLL FK+ GA LIEAS
Sbjct: 3   KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 62

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
             DH+ LV+A+K+VDVVI  ++     SH+IL QLKLV+AI+EAGN+K
Sbjct: 63  LDDHQRLVDALKQVDVVISALA-GGVLSHHILEQLKLVEAIKEAGNIK 109

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 67.0 bits (162), Expect = 7e-15
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           K  + VVG TG  G  +++ + A GH             +  L            L +  
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQGP 57

Query: 63  FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
             ++  L++ +     +    +        I +   L DA + AG ++
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQAG-DEIAIGKDLADAAKRAGTIQ 104

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 64.0 bits (154), Expect = 8e-14
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 3  KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKKQGAHLIEA 61
          +S++L++G TGYIGR + KASL  GH T++L R      + +K Q+L SFK  GA+++  
Sbjct: 3  RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62

Query: 62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQ 96
          S  DH SLVEAVK VDVVI T+  +   S   +++
Sbjct: 63 SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIK 97

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 55.2 bits (132), Expect = 1e-10
 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS---FKKQGAHLIEA 61
             L+ G TG  G  + +  L +G+E + ++R     + +++  +           HL   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 62  SFADHRSLVEAVK--RVDVVICTISGVHFRSH----------NILMQLKLVDAIREAGNV 109
             +D  +L   ++  + D V    +  H              + +  L+L++AIR  G  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 110 KKRKL 114
           KK + 
Sbjct: 123 KKTRF 127

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (129), Expect = 1e-10
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
           M   K+ + G TG  G   +  ++  G+E  VL R     D  +L               
Sbjct: 1   MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-----DSSRLPSEGPRPAHVVVGDV 55

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107
              AD    V     V V++ T + +   +        +V A++  G
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG 102

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 18/115 (15%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
           + ++L+ GG G++G  +    +  GHE  V+     G     ++  +  +          
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTG-RKRNVEHWIGHEN-------FE 52

Query: 63  FADHRSLVEAVKRVDVVI----------CTISGVHFRSHNILMQLKLVDAIREAG 107
             +H  +      VD +              + +     N +  L ++   +  G
Sbjct: 53  LINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG 107

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 48.2 bits (113), Expect = 3e-08
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           K+L+ GG G++G  +   +L+QG +  V          D L  L S        +     
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN--FEFVHGDIR 59

Query: 65  DHRSLVEAVK--RVDVVICTISGVHFRS----------HNILMQLKLVDAIREAGNVKK 111
           +   +   +     D        V   +           N+   L L++A+R+  +   
Sbjct: 60  NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 47.9 bits (112), Expect = 4e-08
 Identities = 17/93 (18%), Positives = 32/93 (34%)

Query: 4   SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           S VLV G  G++   +V+  L  G++     R    L   + +    +  +    +    
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 64  ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQ 96
               +  E +K    V    S V F +    + 
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVV 104

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 1e-07
 Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 4/92 (4%)

Query: 4  SK-VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS 62
          SK VLV GG GYIG   V   +  G++  V          D +  L    K      E  
Sbjct: 1  SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS-TYDSVARLEVLTKHHIPFYEVD 59

Query: 63 FADHRSLVEAVK--RVDVVICTISGVHFRSHN 92
            D + L +  K  ++D VI            
Sbjct: 60 LCDRKGLEKVFKEYKIDSVIHFAGLKAVGEST 91

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 1e-07
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 16/128 (12%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL----SFKKQGAHL 58
           ++  L+ G TG  G  + +  L +G+E + + R     +  +++ L     +  +    L
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60

Query: 59  IEASFADHRSLVEAVKRVD------------VVICTISGVHFRSHNILMQLKLVDAIREA 106
                 D   LV+ +  V             V I      +    + +  L+L+DA++  
Sbjct: 61  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120

Query: 107 GNVKKRKL 114
           G +   K 
Sbjct: 121 GLINSVKF 128

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 2e-07
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 13/110 (11%)

Query: 3   KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG--LDIDKLQMLLSFKKQGAHLIE 60
           K +V + G  G +G  I +    +G    VL+  D    LD   +    + ++     + 
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLA 61

Query: 61  ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK 110
           A+                V        F   N++++  ++ A  +    K
Sbjct: 62  AAKVGGI-----------VANNTYPADFIYQNMMIESNIIHAAHQNDVNK 100

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 45.5 bits (107), Expect = 3e-07
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 15/117 (12%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
           K+L+ GG G+IG  +V+  +    +T V + +     +++ L  +    +   +   A  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNR--YNFEHADI 59

Query: 64  ADHRSLVEAVK--RVDVVI--CTISGVH--------FRSHNILMQLKLVDAIREAGN 108
            D   +    +  + D V+     S V         F   NI+    L++  R+  +
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWS 116

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.4 bits (106), Expect = 3e-07
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 4/94 (4%)

Query: 3  KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS----FKKQGAHL 58
          +   L+ G TG  G  + +  L +G+E + L R     +  ++  +        K    L
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 59 IEASFADHRSLVEAVKRVDVVICTISGVHFRSHN 92
            A   D  SL   +  +                
Sbjct: 61 HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAV 94

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 45.3 bits (106), Expect = 3e-07
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
          +VLV GG+GYIG       L  GH+  +L           L ++     +    +E    
Sbjct: 2  RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIR 60

Query: 65 DHRSLVEAVK--RVDVVI 80
          +   + E +    +D VI
Sbjct: 61 NEALMTEILHDHAIDTVI 78

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 45.3 bits (105), Expect = 4e-07
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
          +VL++G  G+IG  + +  L + H          GLDI    +         H +E   +
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEV------YGLDIGSDAISRFLNHPHFHFVEGDIS 55

Query: 65 DHRSLVE-AVKRVDVVICTISGVHFRSHN 92
           H   +E  VK+ DVV+  ++      + 
Sbjct: 56 IHSEWIEYHVKKCDVVLPLVAIATPIEYT 84

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 44.0 bits (102), Expect = 7e-07
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKK 53
          K+L+ G  G +GR I K    +  E       D+ + ++  +    + KK
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKK 52

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.2 bits (103), Expect = 8e-07
 Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 9/97 (9%)

Query: 1   MGKS-KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI 59
             ++ K+ + G  G+I   I +    +GH         I  D  K + +           
Sbjct: 12  PSENLKISITGAGGFIASHIARRLKHEGHYV-------IASDWKKNEHMTEDMF-CDEFH 63

Query: 60  EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQ 96
                   + ++  + VD V    + +          
Sbjct: 64  LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNH 100

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 44.0 bits (103), Expect = 9e-07
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 5   KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD-----IDKLQMLLSFKKQGAHLI 59
           ++LV GG G+IG   V+  LA  +         I LD      ++  +           +
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEV-IVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 60  EASFADHRSLVEAVKRVDVVICTISGVHFRSH----------NILMQLKLVDAIREAGNV 109
                D   L   ++ VD ++   +  H              N+     L+    +AG  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 110 K 110
           +
Sbjct: 121 R 121

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 1e-06
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD-----IDKLQMLLSFKKQG 55
          M + KVLV GG GYIG   V   L  G+   V+              + L+ +     + 
Sbjct: 1  MAE-KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS 59

Query: 56 AHLIEASFADHRS 68
              E    D  +
Sbjct: 60 VEFEEMDILDQGA 72

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.9 bits (100), Expect = 2e-06
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
          M    V+V G    IG  +V+  +   +  +++       D++K   L S K    H++ 
Sbjct: 1  MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHII---ATARDVEKATELKSIKDSRVHVLP 57

Query: 61 ASFADHRSLVEAVKRV 76
           +    +SL   V +V
Sbjct: 58 LTVTCDKSLDTFVSKV 73

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.0 bits (99), Expect = 2e-06
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 16/110 (14%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVL---------------QRPDIGLDIDKLQ 46
           G  +V+V+GG GY G         + +E  ++                   I    D++ 
Sbjct: 1   GS-RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59

Query: 47  MLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQ 96
              +   +   L      D   L E+ K  +       G    +   ++ 
Sbjct: 60  RWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMID 109

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.7 bits (99), Expect = 2e-06
 Identities = 18/92 (19%), Positives = 27/92 (29%), Gaps = 2/92 (2%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
            LV G TG  G  + K  L +G+  + L          +L+ L           +   A
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGD--IQYEDGDMA 59

Query: 65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQ 96
          D  S+  AV +                    Q
Sbjct: 60 DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQ 91

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 42.6 bits (98), Expect = 3e-06
 Identities = 9/57 (15%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPDIGLDI-DKLQMLLSFKKQGAHLI 59
           +L+ G TG +G  + ++    G+   + +   +   D  +   +  + +K    +I
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVI 58

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 42.3 bits (98), Expect = 4e-06
 Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 1/65 (1%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
           ++V GG G+IG   V        + +V    D          L +       L+    A
Sbjct: 4  NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAILGDRVELVVGDIA 62

Query: 65 DHRSL 69
          D   +
Sbjct: 63 DAELV 67

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 4e-06
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQML 48
          M    V ++G +G  GR ++K  L QG   +  ++ R  +  D +  + +
Sbjct: 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV 61

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.3 bits (95), Expect = 6e-06
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          +VL+ G TG  G  ++   L++     V+  
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.4 bits (95), Expect = 6e-06
 Identities = 7/28 (25%), Positives = 11/28 (39%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVL 33
          VLV G +G  G+ + K       +    
Sbjct: 6  VLVTGASGRTGQIVYKKLKEGSDKFVAK 33

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQR 35
          GK +V V G TG+ G  +       G        
Sbjct: 8  GK-RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL 40

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.9 bits (92), Expect = 2e-05
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 13/121 (10%)

Query: 1   MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD--IDKLQMLLSFKKQ-GAH 57
                 L+ G  G+IG  +++  L    +   L     G    +D+++ L+S K+     
Sbjct: 14  AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73

Query: 58  LIEASFADHRSLVEAVKRVD----------VVICTISGVHFRSHNILMQLKLVDAIREAG 107
            I+    +      A   VD          V       +   + NI   L ++ A R+A 
Sbjct: 74  FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK 133

Query: 108 N 108
            
Sbjct: 134 V 134

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
           GK   LV G    IGR   +A L +G +  ++          K  +   F+ Q    I+ 
Sbjct: 3   GK-VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 62  SFADHRSLVEAVK-------RVDVVICTISGVHFRSHNILMQLKLVDAIR 104
             AD + L +  +       R+D+++      + ++    +Q+ LV  I 
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVIS 111

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 10/90 (11%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          G+ +VLV G    IGR  V+A  A G     + R         L  L+  +  G   +  
Sbjct: 7  GR-RVLVTGAGKGIGRGTVQALHATGARVVAVSR-----TQADLDSLVR-ECPGIEPVCV 59

Query: 62 SFADHRS---LVEAVKRVDVVICTISGVHF 88
             D  +    + +V  VD+++   +    
Sbjct: 60 DLGDWEATERALGSVGPVDLLVNNAAVALL 89

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 36.2 bits (81), Expect = 4e-04
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 12/86 (13%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
          ++V GG G+IG  IVKA   +G          + +D       L    +  +L++ + AD
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDI------LVVDN------LKDGTKFVNLVDLNIAD 49

Query: 66 HRSLVEAVKRVDVVICTISGVHFRSH 91
          +    + + ++               
Sbjct: 50 YMDKEDFLIQIMAGEEFGDVEAIFHE 75

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 35.9 bits (82), Expect = 5e-04
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
          VL+ GG   +GR       A+G +  ++     GL+  K  +L +          A  +D
Sbjct: 7  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 66 -------HRSLVEAVKRVDVVIC 81
                   +  E   R+D    
Sbjct: 67 EAQVEAYVTATTERFGRIDGFFN 89

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 1  MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE 60
          + K  ++V GG   IG    +A  A G    V+ R       +  + +           +
Sbjct: 8  VNK-TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV-EVTEKVGKEFGVKTKAYQ 65

Query: 61 ASFADHRSLVEAVKRVDVVICTISGVH 87
             ++   + + ++++D  +  ISG+ 
Sbjct: 66 CDVSNTDIVTKTIQQIDADLGPISGLI 92

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 35.5 bits (80), Expect = 7e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQ-GHETYVL 33
          +VLV GG GYIG   V+A L    H   ++
Sbjct: 4  RVLVCGGAGYIGSHFVRALLRDTNHSVVIV 33

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (81), Expect = 8e-04
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          G  + LV G    IGR  VKA  A G +   + R         L  L   +  G   +  
Sbjct: 5  GL-RALVTGAGKGIGRDTVKALHASGAKVVAVTR-----TNSDLVSLAK-ECPGIEPVCV 57

Query: 62 SFADH---RSLVEAVKRVDVVICTISGVHFRS 90
             D       +  +  VD+++   + V  + 
Sbjct: 58 DLGDWDATEKALGGIGPVDLLVNNAALVIMQP 89

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 35.2 bits (81), Expect = 8e-04
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 16/87 (18%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          GK  VLV GG   IGR I +A   +G    +      G ++         +  G    + 
Sbjct: 5  GK-GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA--------EAIGGAFFQV 55

Query: 62 SFADHRSLVEAVK-------RVDVVIC 81
             D R  V  V+       RVDV++ 
Sbjct: 56 DLEDERERVRFVEEAAYALGRVDVLVN 82

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          G+  VL+ GG   +GR +V   +A+G +  VL +       ++L  L +        I  
Sbjct: 5  GE-AVLITGGASGLGRALVDRFVAEGAKVAVLDK-----SAERLAELETDHGDNVLGIVG 58

Query: 62 SFADHRSLVEAVKRV 76
                   +A  R 
Sbjct: 59 DVRSLEDQKQAASRC 73

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 4  SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF 63
          S  +V     + G          GH               +   L +F +    L   S 
Sbjct: 1  STAIVTNVKHFGGMGSALRLSEAGHTVACHDE-----SFKQKDELEAFAETYPQLKPMSE 55

Query: 64 ADHRSLVEAVK----RVDVVI 80
           +   L+EAV     +VDV++
Sbjct: 56 QEPAELIEAVTSAYGQVDVLV 76

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 34.9 bits (79), Expect = 0.001
 Identities = 15/71 (21%), Positives = 26/71 (36%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           ++ GG   IG  I      QG    V  R   G     +  L + +   A L +   + 
Sbjct: 4  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 66 HRSLVEAVKRV 76
            SL++  + +
Sbjct: 64 SSSLLDCCEDI 74

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 34.5 bits (78), Expect = 0.002
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 7/79 (8%)

Query: 5  KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64
          KV+V GG G +G  I++     G+         I L  +             +  E   +
Sbjct: 4  KVIVYGGKGALGSAILEFFKKNGYTVLN-----IDLSANDQADSNILVDGNKNWTEQEQS 58

Query: 65 DHRSLVEAVK--RVDVVIC 81
                 +++  +VD V C
Sbjct: 59 ILEQTASSLQGSQVDGVFC 77

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 13/81 (16%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
           K  VLV+  +  IGR +      +G E  +  R     + + L      K+ G   +  
Sbjct: 4  DK-GVLVLAASRGIGRAVADVLSQEGAEVTICAR-----NEELL------KRSGHRYVVC 51

Query: 62 SF-ADHRSLVEAVKRVDVVIC 81
              D   L E VK VD+++ 
Sbjct: 52 DLRKDLDLLFEKVKEVDILVL 72

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 34.0 bits (77), Expect = 0.002
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 13/98 (13%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          GK   L+ G    IGR   +A + +G    +        +++  +   +     A  I  
Sbjct: 5  GK-TALITGSARGIGRAFAEAYVREGARVAIADI-----NLEAARATAAEIGPAACAIAL 58

Query: 62 SFAD-------HRSLVEAVKRVDVVICTISGVHFRSHN 92
             D          L++    +D+++   +        
Sbjct: 59 DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIV 96

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 13/97 (13%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          GK   LV GG   +G   V+A +A+G +       D     ++ + + +     A  +  
Sbjct: 6  GK-VALVSGGARGMGASHVRAMVAEGAKVVFGDILD-----EEGKAMAAELADAARYVHL 59

Query: 62 SFAD-------HRSLVEAVKRVDVVICTISGVHFRSH 91
                       + V A   + V++     ++  + 
Sbjct: 60 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI 96

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD--IDKLQMLLSFKKQG-AHL 58
          G+   +V GG   IG+ IVK  L  G    +  R    L    D+LQ  L   KQ     
Sbjct: 12 GQ-VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 59 IEASFADHRSLVEAVKRV 76
          I+ +  +   +   VK  
Sbjct: 71 IQCNIRNEEEVNNLVKST 88

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 9/86 (10%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          G+   LV GG+  +G  I +     G    V  R       +  Q L             
Sbjct: 5  GR-VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS-EAAQKLTEKYGVETMAFRC 62

Query: 62 SFAD-------HRSLVEAVKRVDVVI 80
            ++         ++ E   ++D V+
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVV 88

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 33.4 bits (76), Expect = 0.003
 Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 13/101 (12%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          GK  V++ GG   +G    + ++A G    +    D     ++           A     
Sbjct: 5  GK-TVIITGGARGLGAEAARQAVAAGARVVLADVLD-----EEGAATARELGDAARYQHL 58

Query: 62 SFADHRSLVEAVK-------RVDVVICTISGVHFRSHNILM 95
                     V         VD ++               
Sbjct: 59 DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETES 99

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
           K  VL+ G    IGR  ++    +G            ++   L+     +  GAH +  
Sbjct: 5  DK-AVLITGAAHGIGRATLELFAKEGARLVA-----CDIEEGPLREAA--EAVGAHPVVM 56

Query: 62 SFAD-------HRSLVEAVKRVDVVIC 81
            AD           +  + R+D V+ 
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGVVH 83

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 15/102 (14%)

Query: 2   GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLI 59
            K   ++ GG G IG    K  +  G +  +       +  D  Q + +          +
Sbjct: 6   DK-VAIITGGAGGIGETTAKLFVRYGAKVVI-----ADIADDHGQKVCNNIGSPDVISFV 59

Query: 60  EASFADHRSLVEAVK-------RVDVVICTISGVHFRSHNIL 94
                    +   V        ++D++   +  +    ++IL
Sbjct: 60  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSIL 101

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 33.2 bits (75), Expect = 0.004
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 2/75 (2%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          GK   LV G    IGR +      +G +  V          +++   +      A  ++A
Sbjct: 18 GK-VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE-SAEEVVAAIKKNGSDAACVKA 75

Query: 62 SFADHRSLVEAVKRV 76
          +      +V   +  
Sbjct: 76 NVGVVEDIVRMFEEA 90

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 33.2 bits (75), Expect = 0.004
 Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 9/93 (9%)

Query: 6  VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD 65
           LV G    IG+ I    +  G    +    D       +   ++     A  ++   +D
Sbjct: 4  ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA--KAVASEINQAGGHAVAVKVDVSD 61

Query: 66 -------HRSLVEAVKRVDVVICTISGVHFRSH 91
                      + +   DV++           
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI 94

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 33.1 bits (75), Expect = 0.004
 Identities = 16/75 (21%), Positives = 22/75 (29%), Gaps = 3/75 (4%)

Query: 2  GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA 61
          G    LV GG+  IG  IV+   + G   Y   R    L  +        K         
Sbjct: 8  GC-TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL--NDCLTQWRSKGFKVEASVC 64

Query: 62 SFADHRSLVEAVKRV 76
            +      E +  V
Sbjct: 65 DLSSRSERQELMNTV 79

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.92
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.9
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.85
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.85
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.84
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.83
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.81
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.81
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.81
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.8
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.8
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.8
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.79
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.79
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.79
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.78
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.78
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.77
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.77
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.76
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.76
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.76
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.76
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.76
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.76
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.75
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.75
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.75
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.75
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.75
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.74
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.74
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.74
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.74
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.74
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.74
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.74
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.74
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.73
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.73
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.72
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.72
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.72
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.72
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.72
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.72
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.72
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.71
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.71
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.7
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.7
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.69
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.69
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.69
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.69
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.69
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.69
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.68
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.68
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.68
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.67
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.67
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.66
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.66
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.65
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.65
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.63
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.63
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.62
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.61
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.59
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.59
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.56
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.56
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.56
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.54
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.48
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.46
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.46
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.46
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.43
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.41
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.28
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.27
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.25
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.24
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	99.15
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.1
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	99.08
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.05
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.91
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.85
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.85
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.73
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.64
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.56
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.54
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.52
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.51
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	98.45
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.44
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.42
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.39
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.38
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.37
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.34
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.33
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.33
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.32
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.31
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.31
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	98.3
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.26
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.26
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.25
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.23
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.22
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.22
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.22
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.2
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.19
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.19
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	98.18
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.17
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.16
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.13
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.12
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	98.12
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	98.12
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.1
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	98.1
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.1
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.08
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.08
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	98.06
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.05
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	98.03
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	98.02
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	98.01
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.98
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.97
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.97
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.95
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.9
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.9
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.86
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.83
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.81
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.8
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.76
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.74
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.73
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.7
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.69
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.68
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.68
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.64
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.61
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.61
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.59
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.54
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.52
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.51
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.49
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	97.49
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.48
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	97.47
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	97.46
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	97.43
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	97.41
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.4
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	97.35
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.34
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	97.33
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.33
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	97.33
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.31
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.31
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	97.3
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.28
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.27
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	97.27
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.27
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.27
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	97.26
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.26
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	97.25
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.24
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	97.2
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.18
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	97.18
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	97.16
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.13
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	97.12
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	97.1
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.1
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.07
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.06
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.05
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.02
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.01
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.99
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.98
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.91
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.88
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.86
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.83
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.79
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.74
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.74
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.69
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.68
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	96.67
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.67
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.65
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.65
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.64
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.63
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.62
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.62
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.6
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.49
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	96.48
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	96.46
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	96.42
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.4
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	96.37
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	96.35
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.29
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	96.28
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.25
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	96.21
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.21
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.2
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.19
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	96.14
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	96.12
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	96.07
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.06
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	96.03
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	96.0
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	95.9
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	95.85
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	95.8
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.74
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.71
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	95.67
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.64
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	95.64
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.62
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	95.6
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	95.59
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.55
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.51
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	95.49
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	95.47
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.45
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.42
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	95.35
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	95.35
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.34
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	95.3
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	95.22
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	95.21
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	95.21
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	95.2
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	95.18
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	95.16
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	95.09
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.05
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	94.92
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	94.86
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	94.85
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.77
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	94.75
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.73
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.69
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.67
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	94.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.64
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	94.62
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.61
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	94.59
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	94.5
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.37
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	94.24
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.13
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	94.11
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.05
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	93.9
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	93.84
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	93.77
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	93.74
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.74
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	93.69
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	93.66
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.61
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.54
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	93.52
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.41
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	93.4
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.39
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.38
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	93.34
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	93.3
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	93.3
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	93.18
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	93.17
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	93.16
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	93.13
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	93.11
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.1
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	92.98
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	92.72
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	92.7
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	92.68
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.56
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.54
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	92.51
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	92.43
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	92.34
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.23
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	92.18
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	91.97
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	91.9
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	91.88
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.83
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	91.81
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	91.76
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	91.66
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.66
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	91.63
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	91.63
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	91.6
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	91.51
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	91.38
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	91.38
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	91.32
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	91.2
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	91.17
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	91.03
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.89
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.66
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.59
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.58
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.57
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	90.19
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	90.17
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	90.08
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	89.91
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	89.82
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	89.78
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	89.53
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.52
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	89.34
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.32
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	89.06
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	88.74
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.54
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	88.37
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	88.21
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	88.2
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.15
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.12
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.89
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	87.83
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	87.63
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	87.47
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	87.45
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.43
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	87.4
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	87.34
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	87.19
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	86.65
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.56
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	86.46
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.13
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	85.99
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	85.93
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.76
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	85.64
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	85.5
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.22
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	85.2
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	85.03
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	85.01
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.98
d2py6a1	395	Methyltransferase FkbM {Methylobacillus flagellatu	84.74
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	84.58
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	84.56
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	84.37
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	84.36
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	84.36
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	84.15
d1y44a1	307	Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId	84.05
d1gpea1	391	Glucose oxidase {Penicillium amagasakiense [TaxId:	83.68
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.63
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	83.52
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	83.42
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	82.85
d1qzua_	181	4'-phosphopantothenoylcysteine decarboxylase (PPC	82.81
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	82.75
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	82.44
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.31
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	82.25
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	82.18
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	81.8
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.72
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.66
d1g5qa_	174	Epidermin modifying enzyme (peptidyl-cysteine deca	81.43
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	81.31
d1cf3a1	385	Glucose oxidase {Aspergillus niger [TaxId: 5061]}	81.25
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	81.13
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	81.05
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	81.04
d1js1x2	161	Transcarbamylase-like protein {Bacteroides fragili	80.81
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	80.78
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	80.72
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	80.25
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	80.06

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-24  Score=140.42  Aligned_cols=111  Identities=22%  Similarity=0.217  Sum_probs=96.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |.+|+|+|+||+|++|++++++|+++|++|++++|++        .+.+.....+++++.+|++|++++.++++++|+||
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~--------~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi   72 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS--------SRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVI   72 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG--------GGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcCh--------hhcccccccccccccccccchhhHHHHhcCCCEEE
Confidence            7889999999999999999999999999999999997        33333445779999999999999999999999999


Q ss_pred             EeCccccc---eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           81 CTISGVHF---RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        81 ~~a~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      +++|....   ...+..++.++++++.+++ ++|+|++||...
T Consensus        73 ~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~  114 (205)
T d1hdoa_          73 VLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFL  114 (205)
T ss_dssp             ECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGG
T ss_pred             EEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeec
Confidence            99986432   3457889999999999999 899999987654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.7e-23  Score=141.75  Aligned_cols=117  Identities=23%  Similarity=0.357  Sum_probs=97.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+|+||||+|+||+++++.|+++|++|++++|...... ......+.....+++++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT-THHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcch-hhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            67999999999999999999999999999987553322 22233334456789999999999999999998  6999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      +|+...          ..+.|+.|+.+++++|.+.+ ++++|++||...|.
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~  129 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG  129 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEc
Confidence            997432          35678999999999999998 89999999887663

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=2.8e-21  Score=132.58  Aligned_cols=117  Identities=24%  Similarity=0.327  Sum_probs=96.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |.|+||||+|+||++++++|+++|++|+++++...+.. ......+.....+++++.+|++|.+.+.++++  ++|+|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTY-DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT-HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcch-hHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            56999999999999999999999999999986543322 22223334456789999999999999999987  6899999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      +|+...          +...|+.++.++++++.+.+ +++++++||...|.
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg  130 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYG  130 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeec
Confidence            998542          24578999999999999998 89999999887763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.8e-22  Score=128.83  Aligned_cols=112  Identities=21%  Similarity=0.268  Sum_probs=94.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |++|+|+||||+|++|++++++|+++|+  +|++++|++.....        .....++...+|+.+.+++.++++++|+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--------~~~~~i~~~~~D~~~~~~~~~~~~~~d~   83 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--------EAYKNVNQEVVDFEKLDDYASAFQGHDV   83 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--------GGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--------cccceeeeeeeccccccccccccccccc
Confidence            6788999999999999999999999984  89999998733221        1235678888999999999999999999


Q ss_pred             EEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           79 VICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|...       +...|+.++.+++++|.+.+ +++|+++|+...+
T Consensus        84 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~  132 (232)
T d2bkaa1          84 GFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGAD  132 (232)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCC
T ss_pred             ccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccc
Confidence            999998542       34567889999999999998 8999999977654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.3e-21  Score=135.04  Aligned_cols=118  Identities=19%  Similarity=0.213  Sum_probs=87.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh---hhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL---SFKKQGAHLIEASFADHRSLVEAVKR--VDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   78 (124)
                      |.++||||+|+||++++++|++.|++|++++|.++.....+.+...   .....+++++++|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6789999999999999999999999999999976433222222221   12346799999999999999999985  599


Q ss_pred             EEEeCcccc----------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           79 VICTISGVH----------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                      |+|+|+..+          +.+.|+.|+.+++++|.+.+  +..|+|++||...|
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vY  136 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY  136 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhh
Confidence            999997542          24678999999999999876  13489999987765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.85  E-value=4.3e-21  Score=130.37  Aligned_cols=111  Identities=18%  Similarity=0.278  Sum_probs=86.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEEe
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~   82 (124)
                      ||+||||+|+||+++++.|+++|++|+++++-.............  ...+++++.+|+.|.+++.+++++  +|+|||+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~--~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh--ccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            699999999999999999999999999987543222222222221  246799999999999999999986  6999999


Q ss_pred             Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      |+...          ..+.|+.|+.++++++.+.+ ++++++.||+
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~  124 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSST  124 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEE
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhccc-cccccccccc
Confidence            98653          24578999999999999998 5555544443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.5e-21  Score=130.59  Aligned_cols=120  Identities=22%  Similarity=0.267  Sum_probs=95.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC-----CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG-----LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-   75 (124)
                      |.|+|+||||+|++|+++++.|+++|++|+++++....     ......+........++.++++|++|.+.+.+++.+ 
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            34789999999999999999999999999999753211     112333444445578899999999999999998875 


Q ss_pred             -cCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           76 -VDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        76 -~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                       .++++|+|+...          ..+.|+.++.++++++.+.+ +++++++||...|.
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~  137 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYG  137 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGC
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeee
Confidence             568999998542          24678999999999999998 89999999776553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.5e-20  Score=130.72  Aligned_cols=119  Identities=21%  Similarity=0.238  Sum_probs=91.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC---------------CCCCchHHHHHhhhhccCCeEEEEcccCChH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP---------------DIGLDIDKLQMLLSFKKQGAHLIEASFADHR   67 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~---------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   67 (124)
                      +|+|+||||+|++|++++++|+++|++|++++.-               +.................+++++.+|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            5899999999999999999999999999998621               1111122223333334678999999999999


Q ss_pred             HHHHHhcc--cCEEEEeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           68 SLVEAVKR--VDVVICTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        68 ~~~~~~~~--~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      .+++++++  +|+|+|+|+...             ++..|+.|+.++++++.+.+..++++++|+...|
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGG
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccc
Confidence            99999985  699999997431             2457899999999999999844566777766544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=2.2e-20  Score=128.64  Aligned_cols=112  Identities=13%  Similarity=0.147  Sum_probs=92.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++|+|+||||+|+||+++++.|+++|++|+++++.+....        .......++..+|+.+.+.+.++++++|+|+|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih   85 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFN   85 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--------hhhcccCcEEEeechhHHHHHHHhhcCCeEee
Confidence            3789999999999999999999999999999987652210        11124567889999999999999999999999


Q ss_pred             eCccccc-----------eecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           82 TISGVHF-----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        82 ~a~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      +++....           ...|+.++.++++++.+.+ ++++|++||...|-
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~  136 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYP  136 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSC
T ss_pred             cccccccccccccccccccccccchhhHHHHhHHhhC-cccccccccccccc
Confidence            9975432           3467899999999999999 89999999877653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.83  E-value=7.7e-21  Score=130.31  Aligned_cols=117  Identities=20%  Similarity=0.179  Sum_probs=91.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++|+||||+|+||++++++|+++|++|++++|+.+....................+.+|+.|.+++.+++.++|+++|+
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~   90 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI   90 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhh
Confidence            58999999999999999999999999999999986221111111111112233457889999999999999999999999


Q ss_pred             Cccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           83 ISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        83 a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      ++....       +..|+.++.+++++|.+.+.+++++++||+.
T Consensus        91 a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~  134 (342)
T d1y1pa1          91 ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             CCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             cccccccccccccccchhhhHHHHHHhhhcccccccccccccce
Confidence            986542       3468999999999999874489999999864

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.81  E-value=5.9e-20  Score=126.86  Aligned_cols=115  Identities=18%  Similarity=0.290  Sum_probs=88.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeE-EEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHET-YVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v-~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      |+|+||||+|+||++++++|++.|+++ +++++.......   .....+ ...+++++.+|++|++.+.+++++  +|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL---ESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG---GGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH---HHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999875 445544322211   112222 356899999999999999999874  8999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhC--------CccEEEEecCCccc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAG--------NVKKRKLNEGMIPF  121 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~ss~~~~  121 (124)
                      ||+|+...          ..+.|+.++.+++++|.+.+        .++++|++||...|
T Consensus        78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vy  137 (361)
T d1kewa_          78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVY  137 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGG
T ss_pred             EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceee
Confidence            99997542          35678999999999998764        14599999987766

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.81  E-value=1.9e-19  Score=123.03  Aligned_cols=119  Identities=18%  Similarity=0.162  Sum_probs=96.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh----hhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL----SFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      +.|++|||||+|++|++++++|.+.|++|++++|..++.... .+...    .....+++++.+|..|.........+.+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN-LDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH-HHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh-HHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            457899999999999999999999999999999865332221 11111    1124578999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      .++|+++...          .+..|+.|+.+++++|.+.+ ++++|++||...|.
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg  147 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYG  147 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeC
Confidence            9999886432          35678999999999999998 89999999988764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.81  E-value=1.9e-19  Score=121.81  Aligned_cols=116  Identities=21%  Similarity=0.087  Sum_probs=91.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+++||||+|+||+++++.|+++||+|++++|..+.......+.+.  ...+++++.+|+.|.+.+.+.+..  .+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            6899999999999999999999999999999987543333333222  245789999999999999998875  678888


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +++...          +...|+.++.++++++.+.+..++++++|+...|
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~  128 (321)
T d1rpna_          79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF  128 (321)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred             ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhc
Confidence            876432          2456889999999999999855678888876544

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.80  E-value=9.5e-20  Score=124.85  Aligned_cols=117  Identities=15%  Similarity=0.201  Sum_probs=90.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++|+|+||||+|++|+++++.|+++|++|.++.++..... ............+++++.+|+.|.+.+.+++++.+.++|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA-GNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT-CCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcc-ccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            4689999999999999999999999987666554321110 111222334567899999999999999999999999999


Q ss_pred             eCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+..          ..++.|+.++.++++++...+  .++++.||...|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vy  127 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVY  127 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGG
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEe
Confidence            98754          234678999999999999998  467777766555

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.6e-19  Score=122.36  Aligned_cols=118  Identities=19%  Similarity=0.208  Sum_probs=90.6

Q ss_pred             ceE-EEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh----hccCCeEEEEcccCChHHHHHHhcc--c
Q 033236            4 SKV-LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS----FKKQGAHLIEASFADHRSLVEAVKR--V   76 (124)
Q Consensus         4 ~~i-li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~--~   76 (124)
                      ||| |||||+|+||++++++|+++|++|++++|.++.......+....    ....+++++.+|++|++.+.+++++  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            567 99999999999999999999999999999765433222222111    1235789999999999999999875  6


Q ss_pred             CEEEEeCcccc----------ceecchHHHHHHHHHHHHhCC--ccEEEEecCCccc
Q 033236           77 DVVICTISGVH----------FRSHNILMQLKLVDAIREAGN--VKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ss~~~~  121 (124)
                      ++++|+++...          +.+.|+.++.++++++.+.+.  ..++|++||..+|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vy  137 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELY  137 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGT
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhee
Confidence            78998887432          236789999999999998762  3489999987765

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.80  E-value=7.6e-19  Score=117.76  Aligned_cols=114  Identities=61%  Similarity=0.895  Sum_probs=96.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++||+||||+|++|++++++|+++|++|++++|++........+....+...+++++.+|+.|.+.+.+++++.+++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            35789999999999999999999999999999999877666666666666778899999999999999999999999999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +++.. ....|..+..++++++.+.+ ..++++.|+
T Consensus        82 ~~~~~-~~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss  115 (312)
T d1qyda_          82 ALAGG-VLSHHILEQLKLVEAIKEAG-NIKRFLPSE  115 (312)
T ss_dssp             CCCCS-SSSTTTTTHHHHHHHHHHSC-CCSEEECSC
T ss_pred             hhhhc-ccccchhhhhHHHHHHHHhc-CCcEEEEee
Confidence            88753 34577788889999999887 445555553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=5.3e-19  Score=120.71  Aligned_cols=109  Identities=18%  Similarity=0.252  Sum_probs=85.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHH-HhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVE-AVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~   81 (124)
                      |+|+||||+|++|++++++|+++| ++|+++++...    .. .  .....++++++.+|+++.+++.+ +.+++|+|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~----~~-~--~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD----AI-S--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG----GG-G--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc----ch-h--hhccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            589999999999999999999999 68999988651    11 1  11235789999999988766555 6778999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          ....|+.++.++++++.+.+ . +.++.||+..|
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~-~~~~~ss~~~~  121 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVY  121 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGG
T ss_pred             ccccccccccccCCcccccccccccccccccccccc-c-ccccccccccc
Confidence            998642          24678999999999999998 4 55666666554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.79  E-value=2.8e-19  Score=118.70  Aligned_cols=120  Identities=16%  Similarity=0.079  Sum_probs=88.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|++....++..+.+......++.++.+|++|+++++++++.     
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            458899999999999999999999999999999998622111222222222345788999999999999998763     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++.++.+++    .+.+ -.++|++||....
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~  146 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL  146 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccce
Confidence              899999998542              1356677766665555    4455 4699999987643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.79  E-value=9.6e-19  Score=119.75  Aligned_cols=115  Identities=18%  Similarity=0.146  Sum_probs=90.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   79 (124)
                      .+|+|+||||+|+||+++++.|+++|++|++++|+.+........ .  ....+++++.+|++|++.+.++++.  +|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~-~--~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET-A--RVADGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH-T--TTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhh-h--hcccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            468999999999999999999999999999999987443222111 1  1245799999999999999999874  7999


Q ss_pred             EEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           80 ICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +|+++...          ....|+.++.++++++.+.+....++++|+..
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~  133 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK  133 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccc
Confidence            99997542          24568999999999999987455566666544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.78  E-value=2.3e-18  Score=113.57  Aligned_cols=116  Identities=11%  Similarity=0.110  Sum_probs=88.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|++.    ...+........++..+++|++|+++++++++      
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~----~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch----HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999873    22222222234678899999999999998875      


Q ss_pred             -ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||....              ++.|+.+...+.+++.    +.+ -.++|++||....
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~  143 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW  143 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhc
Confidence             38999999985421              3567777777666654    444 4689999977643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3e-20  Score=126.03  Aligned_cols=108  Identities=18%  Similarity=0.307  Sum_probs=81.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +|+|+||||+|++|++++++|+++|++|++++|..+...    +..... ....+++...|.     ++.++.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~----~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK----RNVEHWIGHENFELINHDV-----VEPLYIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCH----HHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEE
Confidence            478999999999999999999999999999987542221    111121 234455555555     4456678999999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +|+...          .++.|+.++.++++++.+.+ + ++|++||...|
T Consensus        72 lAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy  119 (312)
T d2b69a1          72 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVY  119 (312)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGG
T ss_pred             CcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChhee
Confidence            998542          24678999999999999998 5 79999887666

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.78  E-value=1.4e-18  Score=115.29  Aligned_cols=120  Identities=18%  Similarity=0.142  Sum_probs=89.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++|+++||||+++||+++++.|+++|++|.+.+|++...+....+........++..+++|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999999873222222222222234468899999999999988875      


Q ss_pred             -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...               .++.|+.++.++.+++.    +.+ -.++|++||...+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~  147 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI  147 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhc
Confidence             3899999998431               13467777777777653    344 4689999986643

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=3.3e-18  Score=112.62  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=87.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++     .+.+........+...+++|++|+++++++++.     
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD-----EEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999987     222222222235678899999999999888763     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++.++.+.+.    +.+ -.++|++||...+
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~  143 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL  143 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccc
Confidence              899999998542              13567777777766553    344 4689999987643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.77  E-value=3.7e-18  Score=115.82  Aligned_cols=116  Identities=21%  Similarity=0.273  Sum_probs=90.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCe------EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHE------TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      |+|+||||+|+||+++++.|+++|++      ++.+++...........  ......+++++.+|..+.........+.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA--PVDADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG--GGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh--hhhcCCCeEEEEeccccchhhhccccccc
Confidence            68999999999999999999999874      44444433221111111  12235679999999999999999999999


Q ss_pred             EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236           78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF  122 (124)
Q Consensus        78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~  122 (124)
                      .|+|+|+...          ..+.|+.++.++++++.+.+ ++++|++||...|.
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg  132 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYG  132 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGC
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeec
Confidence            9999997542          24578999999999999998 89999999887764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.76  E-value=4.6e-18  Score=112.50  Aligned_cols=115  Identities=12%  Similarity=0.089  Sum_probs=88.6

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++    +...+..+. ...++.++++|++++++++++++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD----EEGAATARE-LGDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHT-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHH-hCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            3679999999999999999999999999999999987    222222222 24568899999999999998875      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                       ++|++|||||...              .++.|+.++..+.+++.    +.+ -.++|++||...+
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~  142 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL  142 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhc
Confidence             3899999998542              13567777777666664    444 4799999987644

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-18  Score=115.17  Aligned_cols=120  Identities=16%  Similarity=0.118  Sum_probs=88.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+|+++||||+++||+++++.|+++|++|++.+|+++..++...+..+.....++.++.+|++|+++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999873322222222222234568899999999999998875       


Q ss_pred             ccCEEEEeCccccc------eecchHHHHHHHHHHHH----hC--CccEEEEecCCccc
Q 033236           75 RVDVVICTISGVHF------RSHNILMQLKLVDAIRE----AG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~~~~~----~~--~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||....      .+.|..+..++.+.+.+    .+  ...+||.+||...+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~  140 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  140 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence            38999999996532      45677666666665543    21  12469999987643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.76  E-value=2.9e-18  Score=113.32  Aligned_cols=117  Identities=11%  Similarity=0.050  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|+....++...+ +......++..+++|++++++++++++      
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK-LTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999987322221112 212224568889999999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                       ++|++|||||...              .++.|+.++..+.+++.+    .+ -.++|+++|..
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~  144 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLT  144 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGG
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccch
Confidence             3899999998542              135677888777777655    33 35899887643

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=4.8e-18  Score=111.75  Aligned_cols=114  Identities=15%  Similarity=0.187  Sum_probs=87.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++     ...+........+...+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~-----~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE-----NGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            3689999999999999999999999999999999986     22222222224567889999999999988876      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                       ++|++|||||...              .++.|+.++..+++++.    +.+ -.++|++||...
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~  140 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVG  140 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhh
Confidence             3899999998542              13567777777776664    444 468999997653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=4.5e-18  Score=112.19  Aligned_cols=111  Identities=21%  Similarity=0.203  Sum_probs=86.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|.+.+|++.     ..+..+   ..+..++++|++|+++++++++       
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~-----~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----GKEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-----HHHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999999872     222222   2345688999999999888876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++.+++.+    .+ -.++|++||...+
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~  139 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL  139 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccc
Confidence            3899999998542              235677888777777754    34 4689999977643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.76  E-value=7.1e-18  Score=111.68  Aligned_cols=115  Identities=16%  Similarity=0.131  Sum_probs=87.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+.    +...+..+. ...++..+.+|++|+++++++++.      
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~----~~l~~~~~~-~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINL----EAARATAAE-IGPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCH----HHHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHH-hCCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999986    222222222 246788999999999999998763      


Q ss_pred             -cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           76 -VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                       +|++|||||...              .++.|+.++..+.+++.+    .+.-.++|++||...+
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  143 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR  143 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc
Confidence             899999998542              135677787777776533    3223689999876543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.75  E-value=1.1e-17  Score=115.94  Aligned_cols=118  Identities=21%  Similarity=0.276  Sum_probs=89.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCC--------CCchHHHHHhhh-------hccCCeEEEEcccCCh
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDI--------GLDIDKLQMLLS-------FKKQGAHLIEASFADH   66 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~--------~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~   66 (124)
                      .|+|+||||+|+||++++++|++ .|++|+++++-..        ...+........       ....+..++.+|++|+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57999999999999999999986 6899999874211        111111111111       1234688999999999


Q ss_pred             HHHHHHhc---ccCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           67 RSLVEAVK---RVDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        67 ~~~~~~~~---~~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +.+.++++   ++|+|+|+|+...          ....|..++.++++++.+.+ ++++++.++...|
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~  148 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIF  148 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGT
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccc
Confidence            99999986   4799999998542          24578999999999999998 7889888866544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=2e-18  Score=116.56  Aligned_cols=96  Identities=22%  Similarity=0.364  Sum_probs=82.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi   80 (124)
                      +|+|+||||+|+||++++++|+++|+.++++++..                      .+|+.+.+.+.++++.  +|.++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhcCCCEEE
Confidence            57899999999999999999999999988765543                      1589999999998764  89999


Q ss_pred             EeCcccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           81 CTISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        81 ~~a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      |+++...           +...|+.++.++++++.+.+ ++++||+||...|
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vy  110 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIY  110 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGS
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEc
Confidence            9986442           24678999999999999998 8999999988766

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.75  E-value=6.1e-18  Score=112.03  Aligned_cols=117  Identities=18%  Similarity=0.145  Sum_probs=88.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|.++||||+++||+++++.|+++|++|++.+|+++..++. .+.+.. ...++..+++|++|+++++++++       
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~-~~~l~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-LKELRE-AGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            368889999999999999999999999999999986222111 111211 23568899999999999998876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH------hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE------AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~------~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.++.++.+++.+      .+ ..+++.++|...+
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~  144 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK  144 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGT
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccc
Confidence            3899999998542              245788999999988864      23 4688888876543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.75  E-value=5.7e-18  Score=112.44  Aligned_cols=118  Identities=11%  Similarity=0.029  Sum_probs=86.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+++...++..+.+.. ...++..+++|++|+++++++++       
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999872211122222222 23467889999999999988876       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||....              ++.|..+...+.+++.    +.+.-.+|+++||...
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~  148 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE  148 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchh
Confidence            38999999985421              3567777766666654    3442245888887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.75  E-value=1.4e-17  Score=110.84  Aligned_cols=112  Identities=45%  Similarity=0.689  Sum_probs=92.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-chHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++|+|+||||+|++|++++++|+++|++|++++|++... ...+......+...+++++.+|+.+.+.+.+.+++.+.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            468999999999999999999999999999999987543 2334444555556789999999999999999999999999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      ++++.     .+..+..++++++...+ ++++++.|+..
T Consensus        82 ~~~~~-----~~~~~~~~~~~a~~~~~-~~~~~~~s~~~  114 (307)
T d1qyca_          82 STVGS-----LQIESQVNIIKAIKEVG-TVKRFFPSEFG  114 (307)
T ss_dssp             ECCCG-----GGSGGGHHHHHHHHHHC-CCSEEECSCCS
T ss_pred             ecccc-----cccchhhHHHHHHHHhc-cccceeeeccc
Confidence            99874     45667788899999988 67787777543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.5e-18  Score=110.63  Aligned_cols=117  Identities=13%  Similarity=0.046  Sum_probs=87.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+|+++||||+++||+++++.|+++|++|++.+|++...++.. +... ....++..+.+|++|++++.++++       
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-AKCK-GLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999872221111 1111 134578899999999999998875       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||+|...              .++.|..+..++++++.    +.+ -.++|.+||...+
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~  147 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhc
Confidence            3899999998542              24567777777666654    444 4689999987654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=2.9e-17  Score=107.89  Aligned_cols=114  Identities=21%  Similarity=0.230  Sum_probs=87.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~   78 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++     ...+.... +..++..+.+|++|++++++++++   +|+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~-----~~l~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN-----SDLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            479999999999999999999999999999999986     22222211 234688999999999999999874   899


Q ss_pred             EEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236           79 VICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        79 vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~  121 (124)
                      +|||||....              ++.|..+...+.+++.+    .+.-.++|.+||...+
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  138 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  138 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc
Confidence            9999985421              35677777777776543    2223588988876543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.74  E-value=1.9e-17  Score=108.76  Aligned_cols=110  Identities=20%  Similarity=0.195  Sum_probs=83.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|++     ...+...  +..+.+.+.+|++|+++++++++      
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE-----GPLREAA--EAVGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHH--HTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHH--HHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999986     2222221  23467889999999999998875      


Q ss_pred             -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCC
Q 033236           75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGM  118 (124)
Q Consensus        75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~  118 (124)
                       ++|++|||||...              .++.|+.++..+.+++.+.    + -.+++.+||.
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~  137 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR  137 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCG
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccc
Confidence             3899999998542              1356778887777777553    3 3466666653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.74  E-value=1.8e-17  Score=109.49  Aligned_cols=115  Identities=13%  Similarity=0.109  Sum_probs=87.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      +++|.++||||+++||+++++.|+++|++|++.+|++.    ...+..+.+.  ..++..+.+|++|+++++++++    
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~----~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK----SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH----HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999862    2222222222  3468899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                         ++|++|||+|...              .++.|+.++..+.+++    .+.+ -.+||++||...
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~  149 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVG  149 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHH
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHh
Confidence               3899999998542              1346777776666655    4455 479999998653

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.74  E-value=2.5e-17  Score=109.61  Aligned_cols=115  Identities=10%  Similarity=0.174  Sum_probs=86.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++    +...+..+.+. ...+.++.+|++|+++++++++     
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~----~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD----DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999986    22222233333 3457789999999999999876     


Q ss_pred             --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...                .++.|+.+...+.+++.+    .+ -.++|++||...
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~  146 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISS  146 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGG
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccc
Confidence              3899999998432                124577777777766644    34 468888886543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.74  E-value=1e-17  Score=111.07  Aligned_cols=115  Identities=15%  Similarity=0.150  Sum_probs=86.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++.    ...+..+.+.  ..++.++.+|++|+++++++++    
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~----~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQK----ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999862    2222222222  3467889999999998888764    


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                          ++|++|||||...              .++.|+.++..+.+++.+    .+ -.++|++||...
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~  148 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSG  148 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGG
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccc
Confidence                3899999998542              235677777777766643    34 468999997654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.6e-18  Score=111.10  Aligned_cols=117  Identities=15%  Similarity=0.067  Sum_probs=84.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc-------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      +|+++||||+++||.++++.|+++|++|++.+|++...++.. +.+... ...++..+.+|++++++++++++       
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            688999999999999999999999999999999862211111 112111 12357889999999999988876       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhC-CccEEEEecCCcc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~-~~~~~i~~ss~~~  120 (124)
                      ++|++|||||....              ++.|..+...+.+++.    +.+ .-.++|++||...
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  153 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG  153 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh
Confidence            38999999985421              3456667666655553    333 1358999987653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.74  E-value=2.1e-17  Score=109.09  Aligned_cols=115  Identities=11%  Similarity=0.012  Sum_probs=87.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++    +...+..+.+. ..++.++.+|++|+++++++++.     
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS----DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999986    22222222222 35688999999999999888763     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                        +|++|||||...              .++.|+.++..+.+++.+    .+.-.++|++||...
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~  145 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence              899999998542              235678888877777654    331247888887654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.3e-17  Score=107.18  Aligned_cols=113  Identities=19%  Similarity=0.215  Sum_probs=85.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~   78 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++     ...+.... +..++..+.+|++|+++++++++.   +|+
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~-----~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ-----ADLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH-----HHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            478999999999999999999999999999999986     22222211 234678999999999999999874   899


Q ss_pred             EEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           79 VICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        79 vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      +|||||....              ++.|+.++..+.+++.+    .+.-.+++++||...
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  139 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS  139 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence            9999985421              34567777666665543    222468999987654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=7.2e-18  Score=114.66  Aligned_cols=118  Identities=20%  Similarity=0.185  Sum_probs=86.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh----hhccCCeEEEEcccCChHHHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL----SFKKQGAHLIEASFADHRSLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~--~~   76 (124)
                      +|+++||||+|+||+++++.|+++||+|++++|..+.....+.....    ......++++.+|+.+.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            47899999999999999999999999999999975432222222111    1234568899999999999999886  47


Q ss_pred             CEEEEeCcccc----------ceecchHHHHHHHHHHHHhC----CccEEEEecCCcc
Q 033236           77 DVVICTISGVH----------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~~  120 (124)
                      |+|+|+|+...          ....|..++.++++++.+..    ...+++++||...
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~  138 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM  138 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccccee
Confidence            99999998643          23467888898888886542    1235666665543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.73  E-value=2.2e-17  Score=109.18  Aligned_cols=116  Identities=12%  Similarity=0.056  Sum_probs=88.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++     ...+........+..++.+|++|+++++++++.     
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE-----AAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999986     222222222245678899999999998888763     


Q ss_pred             --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236           76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF  121 (124)
Q Consensus        76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~  121 (124)
                        +|++|||||...              .++.|+.++..+++++.+.-  +-.++|++||...+
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~  142 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW  142 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh
Confidence              899999998542              13567777777777765421  13689999986643

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=1.6e-17  Score=110.10  Aligned_cols=115  Identities=17%  Similarity=0.173  Sum_probs=84.1

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|++..    ..+..+.+  ...++..+.+|++++++++++++    
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~----l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE----LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998722    22222222  23468899999999998887764    


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                          .+|++|||||...              .++.|+.++..+.+++.    +.+ -.++|++||...
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~  148 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAG  148 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccc
Confidence                2899999998542              23567777777776654    344 468999997654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.72  E-value=4.6e-17  Score=107.94  Aligned_cols=114  Identities=15%  Similarity=0.126  Sum_probs=86.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++...    .+..+.+  ...++..+.+|++|+++++++++.    
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l----~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL----EKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999986222    1222222  234688999999999999888763    


Q ss_pred             ---cCEEEEeCccccc---------------eecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 ---VDVVICTISGVHF---------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ---~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                         +|++|||+|....               ++.|+.++..+.+++.    +.+ -.++|++||...
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~  145 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAG  145 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhh
Confidence               8999999985421               2456777776666654    344 469999997653

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=4e-17  Score=108.02  Aligned_cols=114  Identities=13%  Similarity=0.122  Sum_probs=85.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++.    ...+..+.+  ...++..+++|++++++++++++     
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~----~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD----AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999862    222222222  23568899999999999888875     


Q ss_pred             --ccCEEEEeCcccc-------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH-------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...             .++.|+.++..+.+.+.    +.+ -.++|++||...
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~  149 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAA  149 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccch
Confidence              3899999998542             13467777766666554    344 458888887654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5e-17  Score=107.23  Aligned_cols=112  Identities=18%  Similarity=0.186  Sum_probs=85.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------   75 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++     +..+.... +..+...+.+|++|+++++++++.      
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~-----~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE-----SGGRALEQ-ELPGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH-HCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHH-hcCCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999999999986     22222222 234678999999999999988763      


Q ss_pred             -cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCcc
Q 033236           76 -VDVVICTISGVH---------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~  120 (124)
                       +|++|||||...               .++.|+.++.++.+++.+.   + -.++|++||...
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~  141 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVG  141 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHH
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccc
Confidence             899999998431               1345677777776666432   1 258999987653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.72  E-value=5.1e-17  Score=111.21  Aligned_cols=109  Identities=19%  Similarity=0.269  Sum_probs=85.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi   80 (124)
                      ++|+|+||||+|++|+++++.|+++|++|+++.|++++...   ...  ....+++++.+|+.|+ +.++.++.++|+++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~---~~~--~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---EEL--QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---HHH--HTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh---hhh--cccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            46889999999999999999999999999999998744211   111  1346899999999885 55778899999988


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      .+....  ...+.....++++++.+.+ +.++++.||.
T Consensus        77 ~~~~~~--~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~  111 (350)
T d1xgka_          77 INTTSQ--AGDEIAIGKDLADAAKRAG-TIQHYIYSSM  111 (350)
T ss_dssp             ECCCST--TSCHHHHHHHHHHHHHHHS-CCSEEEEEEC
T ss_pred             eecccc--cchhhhhhhHHHHHHHHhC-CCceEEEeec
Confidence            876532  2466778899999999999 5666555543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.72  E-value=2.9e-17  Score=108.62  Aligned_cols=115  Identities=17%  Similarity=0.109  Sum_probs=84.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      |.++||||+++||+++++.|+++|++|++.+|++...++ ..+.+.. ...++..+++|++|+++++++++       ++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~~~~i~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA-VASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            446999999999999999999999999999998722211 1111111 23468889999999999998876       38


Q ss_pred             CEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236           77 DVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~  120 (124)
                      |++|||||...              .++.|+.++.++++++.+    .+...+++++||...
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~  141 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG  141 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhh
Confidence            99999998542              235678888777777543    332357888887653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=5.9e-17  Score=106.13  Aligned_cols=106  Identities=19%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+...             ..++..+++|++|+++++++++       
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999998722             2356789999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|++|||||...              .++.|+.+...+.+.+    .+.+ -.++|++||....
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~  136 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL  136 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhc
Confidence            3899999998542              1356777766655544    4455 5699999987643

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.72  E-value=5.5e-17  Score=107.24  Aligned_cols=120  Identities=13%  Similarity=0.031  Sum_probs=88.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC-ChHHHHHHhc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA-DHRSLVEAVK-----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~-----   74 (124)
                      +++|+++||||+++||..++++|+++|++|+++.|+....+ ...+........++.++.+|++ +.++++++++     
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-HHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH-HHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999988764421 1222222223457889999998 5566776664     


Q ss_pred             --ccCEEEEeCcccc------ceecchHHHHHHHHHHHHhC------CccEEEEecCCccc
Q 033236           75 --RVDVVICTISGVH------FRSHNILMQLKLVDAIREAG------NVKKRKLNEGMIPF  121 (124)
Q Consensus        75 --~~d~vi~~a~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~~~  121 (124)
                        ++|++|||||...      .++.|+.++.++.+.+.+.-      ...++|++||...+
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~  142 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence              4899999999653      25678888888888776521      13579999877654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.71  E-value=6.6e-17  Score=107.99  Aligned_cols=112  Identities=18%  Similarity=0.172  Sum_probs=84.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++     ++.+........++..+.+|++++++++++++       
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~-----~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA-----ERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999986     22222222234578899999999999988875       


Q ss_pred             ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                      ++|++|||||...                   .++.|+.++..+.+++.    +.+  .++|+++|...
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~  145 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAG  145 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGG
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechh
Confidence            3899999998431                   13456677766666654    343  57887776553

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.71  E-value=5.7e-17  Score=107.41  Aligned_cols=115  Identities=15%  Similarity=0.140  Sum_probs=85.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      +++|+++||||+++||+++++.|+++|++|++++|++...    .+..+.+  ......++.+|++++++++++++.   
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l----~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL----DECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987222    1222222  235577889999999988887642   


Q ss_pred             -----cCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 -----VDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 -----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                           +|+++||+|....              .+.|..+...+.+++.    +.+ ..+++++||...
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~  146 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAG  146 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGG
T ss_pred             HhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccc
Confidence                 7999999985421              3456666666666553    444 579999987654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.71  E-value=1.2e-16  Score=104.92  Aligned_cols=112  Identities=16%  Similarity=0.144  Sum_probs=85.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+.     .+.+........++..+++|++++++++++++       
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREE-----RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999999987     22222222234568889999999999988876       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCC-ccEEEEecCC
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGN-VKKRKLNEGM  118 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~  118 (124)
                      ++|++||||+...              ..+.|..+...+.+++.+... -+.++.+|+.
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            3899999998442              135678888888888876532 2355555544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=4.1e-17  Score=107.51  Aligned_cols=99  Identities=18%  Similarity=0.162  Sum_probs=77.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+++||.+++++|+++|+  .|++..|+.+.     .+.+......++.++.+|++++++++++++    
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~-----~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK-----ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG-----CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHH-----HHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            7889999999999999999999999995  68888888722     233333345679999999999998887764    


Q ss_pred             -----ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH
Q 033236           75 -----RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR  104 (124)
Q Consensus        75 -----~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~  104 (124)
                           ++|++|||||...               .++.|+.++..+.+.+.
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  125 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence                 2899999998531               13567788877777664

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.70  E-value=1.3e-16  Score=105.68  Aligned_cols=116  Identities=12%  Similarity=0.107  Sum_probs=84.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++...++...+.. .....++..+++|++|+++++++++       
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG-KEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHH-HHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-HHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999854433322222 2234578899999999999988875       


Q ss_pred             ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCC
Q 033236           75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGM  118 (124)
Q Consensus        75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~  118 (124)
                      ++|++|||||...              .++.|+.++.++.+++.+    .+...+++..++.
T Consensus        87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~  148 (260)
T d1h5qa_          87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM  148 (260)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecc
Confidence            3899999998542              135677777776665543    3323455555543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.6e-16  Score=107.20  Aligned_cols=115  Identities=17%  Similarity=0.163  Sum_probs=85.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc----
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+....+....+....+   ...++..+.+|++|+++++++++    
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998732222211211111   23468899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecC
Q 033236           75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEG  117 (124)
Q Consensus        75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss  117 (124)
                         ++|++|||||...              .++.|+.++..+.+++.+    .+ -.++|.+|+
T Consensus        91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss  153 (297)
T d1yxma1          91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV  153 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC
T ss_pred             HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc
Confidence               3899999998542              245678888887777754    33 356776664

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.69  E-value=4.1e-17  Score=108.81  Aligned_cols=104  Identities=13%  Similarity=0.254  Sum_probs=76.9

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      +++|+++||||+++||+++++.|+++|++|++.+|++...++.. +.+...  ...++..+++|++|+++++++++    
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999872221111 112111  12458899999999999988876    


Q ss_pred             ---ccCEEEEeCccccc------------------eecchHHHHHHHHHHHH
Q 033236           75 ---RVDVVICTISGVHF------------------RSHNILMQLKLVDAIRE  105 (124)
Q Consensus        75 ---~~d~vi~~a~~~~~------------------~~~~~~~~~~~~~~~~~  105 (124)
                         ++|++|||||....                  ++.|+.++..+.+++.+
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p  133 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKP  133 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcc
Confidence               38999999985311                  23567777777776644

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.69  E-value=7.2e-17  Score=106.14  Aligned_cols=116  Identities=13%  Similarity=0.069  Sum_probs=84.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV   76 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   76 (124)
                      +.++||||+++||+++++.|+++|++|++.+++.....++..+..+. ...++..+++|++|+++++++++       ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999998766542111112222222 24567899999999999988876       38


Q ss_pred             CEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           77 DVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                      |++|||||...              .++.|..+..++.+++.    +.+ -.++|++||...+
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~  142 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGL  142 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhc
Confidence            99999998542              23567777766666654    445 4799999987643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.69  E-value=7.4e-17  Score=107.67  Aligned_cols=117  Identities=12%  Similarity=0.176  Sum_probs=84.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      .++|+++||||+++||+++++.|+++|++|++.+|++...++. .+.+...  ...++..+.+|++|+++++++++    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET-KQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999986222111 1112221  12467899999999999988876    


Q ss_pred             ---ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           75 ---RVDVVICTISGVH----------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        75 ---~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                         ++|++|||||...                .++.|+.+...+.+++.+    .+ -.+++++||..
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~  147 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA  147 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhh
Confidence               3899999998431                124567777666666644    43 45777776543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=2.2e-16  Score=101.92  Aligned_cols=108  Identities=22%  Similarity=0.203  Sum_probs=85.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCe--EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHE--TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++|+||||+|++|+++++.|+++|++  |+.+.|++     .   .... ...+++++.+|+++.+++.++++++|+|
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~-----~---~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~v   72 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----Q---GKEK-IGGEADVFIGDITDADSINPAFQGIDAL   72 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH-----H---HHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH-----H---HHHh-ccCCcEEEEeeeccccccccccccceee
Confidence            3578999999999999999999999965  56667876     1   1211 2357889999999999999999999999


Q ss_pred             EEeCccccc-----------------------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           80 ICTISGVHF-----------------------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        80 i~~a~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +|+++....                       ...|+.++.++++.+.... .++..+.|+..
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~  134 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMG  134 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETT
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccc
Confidence            999874311                       1345788999999998887 67777776443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.69  E-value=6.2e-17  Score=107.50  Aligned_cols=114  Identities=13%  Similarity=0.156  Sum_probs=80.7

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      +++|.++||||+++||+++++.|+++|++|++.+|+....++.. +.+...  ...++..+.+|++++++++++++    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999862221111 111111  23458899999999999998876    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHH----hCCccEEEEecC
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEG  117 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss  117 (124)
                         ++|++|||||...                  .++.|+.+...+.+++.+    .+  .++|.++|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S  147 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISS  147 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--Ccceeeee
Confidence               3899999998431                  134567777766666654    33  35555443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.68  E-value=8e-17  Score=105.66  Aligned_cols=112  Identities=14%  Similarity=0.100  Sum_probs=82.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCe-------EEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHE-------TYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~-------v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      .++||||+++||+++++.|+++|++       |.+.+|++.    ...+....+  ....+..+.+|++|+++++++++.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~----~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA----DLEKISLECRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH----HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            4789999999999999999999987       788888862    212222222  234578899999999999888763


Q ss_pred             -------cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236           76 -------VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        76 -------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~  121 (124)
                             +|++|||||...              .++.|+.++..+.+++.    +.+ -.++|++||...+
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~  148 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT  148 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhc
Confidence                   899999998542              23567777777666664    444 4689999977644

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.68  E-value=4e-16  Score=102.61  Aligned_cols=113  Identities=14%  Similarity=0.160  Sum_probs=83.2

Q ss_pred             CceEEEEccCChhcHHHHHHHh---hCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL---AQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   74 (124)
                      +|+++||||+++||+++++.|+   ++|++|++.+|+++..+... +.. . ...++.++.+|++|+++++++++     
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~-~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLA-K-NHSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHH-H-HCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHH-h-cCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            4789999999999999999996   46899999999985543221 111 1 24679999999999998887754     


Q ss_pred             ----ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh---------------CCccEEEEecCCc
Q 033236           75 ----RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA---------------GNVKKRKLNEGMI  119 (124)
Q Consensus        75 ----~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~---------------~~~~~~i~~ss~~  119 (124)
                          ++|++|||||...               .++.|..++..+++.+.+.               + ..++|.++|..
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~  156 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSIL  156 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGG
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-ccccccccccc
Confidence                2899999998531               1346777777777766431               2 35788888754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.6e-17  Score=108.18  Aligned_cols=114  Identities=13%  Similarity=0.085  Sum_probs=87.0

Q ss_pred             CCceE-EEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKV-LVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~i-li~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++|+| +||||+++||.++++.|+++ |++|++.+|+.+..    .+..+.+  ...++.++++|++|.++++++++   
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG----QAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            35666 89999999999999999986 89999999997322    2222222  24568899999999999888765   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                          ++|++|||||...              .+++|+.++..+++.+.+.- .-.++|.+||..
T Consensus        77 ~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             HhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence                3899999999542              24578899999999987642 124899988753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=1.5e-16  Score=105.27  Aligned_cols=120  Identities=14%  Similarity=0.090  Sum_probs=87.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhh---CCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLA---QGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      |.+|.++||||+++||+++++.|++   +|++|++.+|+++..++...+........++..+.+|++++++++++++   
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4678899999999999999999986   7999999999872222111111111123467899999999999888863   


Q ss_pred             --------ccCEEEEeCcccc-----------------ceecchHHHHHHHHHHHHhC-----CccEEEEecCCcc
Q 033236           75 --------RVDVVICTISGVH-----------------FRSHNILMQLKLVDAIREAG-----NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --------~~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ss~~~  120 (124)
                              +.|+++||+|...                 .++.|+.++..+.+++.+.-     ...+++++||...
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc
Confidence                    2578999987431                 13567889999999887642     1247898887654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.67  E-value=3.4e-16  Score=104.20  Aligned_cols=117  Identities=15%  Similarity=0.109  Sum_probs=86.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-----   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----   75 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|+.++..+...+.... ....+.++++|++|++++.++++.     
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-hCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999998863221222222222 345688999999999999888763     


Q ss_pred             --cCEEEEeCccccc--------------eecchHHHHHHHHHHHHhCC-ccEEEEecCC
Q 033236           76 --VDVVICTISGVHF--------------RSHNILMQLKLVDAIREAGN-VKKRKLNEGM  118 (124)
Q Consensus        76 --~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~i~~ss~  118 (124)
                        +|+++|+++....              ++.|..+...+.+++.+.-. -.++++++|.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence              8999999985421              35678888888888876421 2356666543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.66  E-value=3.6e-17  Score=108.91  Aligned_cols=96  Identities=17%  Similarity=0.210  Sum_probs=74.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   81 (124)
                      |+|+||||+|++|+++++.|.+.|+.|.+ ++...                   .+.+|++|++.+++++++  +|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~-------------------~~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCc-------------------cccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            67999999999999999999999975544 44430                   134799999999999975  699999


Q ss_pred             eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      +||...          .+..|..++.++++++.+.+  .+++++||...|
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~  108 (298)
T d1n2sa_          61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVF  108 (298)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGS
T ss_pred             ecccccccccccCccccccccccccccchhhhhccc--cccccccccccc
Confidence            998543          23567899999999998887  456666655444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=3.1e-16  Score=100.63  Aligned_cols=102  Identities=16%  Similarity=0.292  Sum_probs=76.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~v   79 (124)
                      .|+++||||+|++|++++++|+++|+  +|++..|++..            ..+.+   ..+..|..++.+. ...+|+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~~---~~~~~d~~~~~~~~~~~~d~v   66 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRL---DNPVGPLAELLPQLDGSIDTA   66 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTE---ECCBSCHHHHGGGCCSCCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hcccc---cccccchhhhhhccccchhee
Confidence            58999999999999999999999996  66777776511            12223   3344444444443 3458999


Q ss_pred             EEeCccc--------cceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           80 ICTISGV--------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        80 i~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                      ++++|..        .+...++.++.++++++.+.+ +++++++|+...
T Consensus        67 i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~  114 (212)
T d2a35a1          67 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGA  114 (212)
T ss_dssp             EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC
T ss_pred             eeeeeeeccccccccccccchhhhhhhccccccccc-cccccccccccc
Confidence            9999854        234577899999999999988 899999997654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.65  E-value=3.3e-16  Score=103.68  Aligned_cols=114  Identities=15%  Similarity=0.046  Sum_probs=82.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      .+|+++||||+++||.++++.|+++|++|++.+++.+...+...+.... ...++..+.+|++|+++++++++       
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH-cCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999998877652211111222211 23468899999999999988876       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEec
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNE  116 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~s  116 (124)
                      ++|++|||+|....              ++.|+.+..++++.+.+.- .-.+++.++
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            38999999985421              3567788888888887642 013555444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.65  E-value=9.5e-16  Score=100.10  Aligned_cols=108  Identities=21%  Similarity=0.315  Sum_probs=80.3

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~v   79 (124)
                      |++|+++||||+++||+++++.|+++|++|++.+|++        +.++   ....+++.+|+++. +.+.+.+.++|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--------~~l~---~~~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--------ELLK---RSGHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHH---HTCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHH---hcCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            5789999999999999999999999999999999986        2222   23456889999764 5555556679999


Q ss_pred             EEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236           80 ICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP  120 (124)
Q Consensus        80 i~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~  120 (124)
                      |||||....              ++.|..+...+.+++    .+.+ -.++|.++|...
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~  128 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSV  128 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred             EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccc
Confidence            999984421              345666666666655    4444 468888887653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.63  E-value=1.3e-15  Score=100.56  Aligned_cols=116  Identities=19%  Similarity=0.212  Sum_probs=87.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchH--HHHHhhhhccCCeEEEEcccCChHHHHHHhcc----
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDID--KLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----   75 (124)
                      ..+++||||+|+||+++++.|+++|+ +|+++.|+....+..  ..+.++. ...++.++.+|++|+++++++++.    
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhcccccc
Confidence            46899999999999999999999998 578888874322211  1222221 245688999999999999998764    


Q ss_pred             --cCEEEEeCccccc--------------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236           76 --VDVVICTISGVHF--------------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 --~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~  120 (124)
                        +|.|+|++|....              +..|+.+..++.+.+.+.+ ..+++++||...
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~  147 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFAS  147 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhh
Confidence              7899999985421              3567888888888887766 678998887653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=1.1e-15  Score=103.19  Aligned_cols=118  Identities=15%  Similarity=0.102  Sum_probs=82.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC----chHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL----DIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|+....    .....+..............+|+.+.++++++++   
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            478999999999999999999999999999998875321    1122222222112233456778888877666654   


Q ss_pred             ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                          ++|++|||||...              .++.|+.++.++.+++.    +++ -.+||++||...
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhh
Confidence                4899999998542              23567777777766654    445 469999998654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.62  E-value=2.1e-15  Score=99.46  Aligned_cols=117  Identities=15%  Similarity=0.046  Sum_probs=83.6

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|  +||+++++.|+++|++|++.+|++...  ...+.. .........+++|++|+++++++++    
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~--~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR--PEAEKL-AEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHH-HHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH--HHHHHh-hhccCcccccccccCCHHHHHHHHHHHHH
Confidence            3578999999987  899999999999999999888875211  111111 1123457789999999999988875    


Q ss_pred             ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                         ++|++|||+|...                  .++.|..+...+++++.+.- .-.++|++||...
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence               3899999997431                  12456677777777776532 1247888886653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.61  E-value=1.1e-15  Score=97.09  Aligned_cols=81  Identities=25%  Similarity=0.201  Sum_probs=66.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++|+++||||+|++|+.+++.|+++|++|++++|+++    ...+..+.+. ..++.+..+|+++++++.+++.++|+|
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDil   96 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD----KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFV   96 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchH----HHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCee
Confidence            35799999999999999999999999999999999972    2222222222 245678899999999999999999999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      |||+|.
T Consensus        97 in~Ag~  102 (191)
T d1luaa1          97 FTAGAI  102 (191)
T ss_dssp             EECCCT
T ss_pred             eecCcc
Confidence            999984

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.3e-15  Score=99.07  Aligned_cols=116  Identities=15%  Similarity=0.190  Sum_probs=82.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEe---CCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc--
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ---RPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR--   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~---r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~--   75 (124)
                      +|.++||||+++||+++++.|+++|++++.+.   |+.... ....+.....  ...++..+.+|++|++++.++++.  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh-HHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            45578999999999999999999998765544   433111 1111222222  245789999999999999998764  


Q ss_pred             ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236           76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP  120 (124)
Q Consensus        76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~  120 (124)
                         +|+++||+|...              .++.|+.++.++++++.    +++ -.++|++||...
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g  145 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGG  145 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGG
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhh
Confidence               899999998542              23567888777776654    455 479999987654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-14  Score=95.32  Aligned_cols=110  Identities=15%  Similarity=0.137  Sum_probs=83.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   78 (124)
                      ++|+++||||+++||+++++.|+++|++|++.+|++     .+.+...  +..+++...+|+.+.+.++...+   ++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~-----~~l~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~id~   77 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE-----SKLQELE--KYPGIQTRVLDVTKKKQIDQFANEVERLDV   77 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHGGGG--GSTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHH--hccCCceeeeecccccccccccccccccee
Confidence            468999999999999999999999999999999986     2222222  24678899999998887777655   5899


Q ss_pred             EEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236           79 VICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI  119 (124)
Q Consensus        79 vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~  119 (124)
                      +|||+|....              ++.|..++..+.+.+.+    .+ ..+++++||..
T Consensus        78 lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~  135 (245)
T d2ag5a1          78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVA  135 (245)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSB
T ss_pred             EEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechh
Confidence            9999985421              34566777666666543    44 46888887653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.9e-14  Score=95.49  Aligned_cols=118  Identities=19%  Similarity=0.126  Sum_probs=83.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|+++||||+++||+++++.|+++|++|++++|+.+..++.. +............+.+|.++.+......+       
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999872221111 11122234567789999999887776654       


Q ss_pred             ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH---hCCccEEEEecCCccc
Q 033236           75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE---AGNVKKRKLNEGMIPF  121 (124)
Q Consensus        75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~~~  121 (124)
                      .+|+++||+|....              .+.|..+...+.+.+.+   .+ -.+++++||...+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~  154 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK  154 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhc
Confidence            48999999985421              34566666666665543   22 2588888866544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.56  E-value=4.3e-14  Score=94.72  Aligned_cols=83  Identities=17%  Similarity=0.224  Sum_probs=65.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   75 (124)
                      +|+++||||+|+||+++++.|+++|++|++.+|+....++.. +.+..........+.+|++++++++++++       +
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~-~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            588999999999999999999999999999999873222111 12222234567899999999999888765       3


Q ss_pred             cCEEEEeCccc
Q 033236           76 VDVVICTISGV   86 (124)
Q Consensus        76 ~d~vi~~a~~~   86 (124)
                      +|++|||+|..
T Consensus       104 iDilvnnAg~~  114 (294)
T d1w6ua_         104 PNIVINNAAGN  114 (294)
T ss_dssp             CSEEEECCCCC
T ss_pred             cchhhhhhhhc
Confidence            89999999854

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.56  E-value=7.8e-15  Score=96.96  Aligned_cols=91  Identities=19%  Similarity=0.179  Sum_probs=72.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      |+|+||||+|++|++++++|.++|++|++++|++                       +|+.|.+++.++++  ++|+|+|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence            6799999999999999999999999999998864                       38999999999987  4799999


Q ss_pred             eCccccc----------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236           82 TISGVHF----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI  119 (124)
Q Consensus        82 ~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~  119 (124)
                      +++....          ...|.....++.+.+...+  ..++++|+..
T Consensus        59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~  104 (281)
T d1vl0a_          59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDY  104 (281)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGG
T ss_pred             eccccccccccccchhhccccccccccccccccccc--ccccccccce
Confidence            9985531          2345666777777777776  4566666443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.54  E-value=1.3e-15  Score=100.39  Aligned_cols=108  Identities=14%  Similarity=0.095  Sum_probs=76.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------ccC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RVD   77 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   77 (124)
                      +++||||+++||+++++.|+++|++|.+.+|+....     +..+...   ..+..+|++++++++++++       ++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~-----~~~~~~~---~~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK-----DELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH-----HHHHHHH---HHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHhhh---CcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999886322     1121111   1234678888877777664       489


Q ss_pred             EEEEeCcccc---------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236           78 VVICTISGVH---------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        78 ~vi~~a~~~~---------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~  121 (124)
                      ++|||||...               .++.|..+..++++++    .+.+ -.++|++||...+
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~  135 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF  135 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccc
Confidence            9999998431               1235666666666655    4444 4689999987654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=9e-14  Score=90.61  Aligned_cols=107  Identities=16%  Similarity=0.157  Sum_probs=75.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh-------c
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV-------K   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~   74 (124)
                      ++|+++||||+|+||+++++.|+++|++|.++++++...            ......+.+|..+.++.+.+.       .
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            479999999999999999999999999999998876211            122234455665554444332       1


Q ss_pred             --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                        ++|++|||||...               .++.|+.+..++.+++.+.- .-.++|++||...
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence              3899999998431               13567778888888877642 1358999987654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.4e-13  Score=86.35  Aligned_cols=114  Identities=13%  Similarity=0.166  Sum_probs=83.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (124)
                      ++|.++||||+++||+++++.|+++|++|++.+|+....+    +..+. .........+|+.+.++++...+       
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~----~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE----AQAKK-LGNNCVFAPADVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH----HHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHH-hCCCcccccccccccccccccccccccccc
Confidence            5789999999999999999999999999999999874332    12222 24567888999999877766654       


Q ss_pred             ccCEEEEeCccc--------------------cceecchHHHHHHHHHHHHhC---------CccEEEEecCCcc
Q 033236           75 RVDVVICTISGV--------------------HFRSHNILMQLKLVDAIREAG---------NVKKRKLNEGMIP  120 (124)
Q Consensus        75 ~~d~vi~~a~~~--------------------~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~ss~~~  120 (124)
                      ..|.++++++..                    ...+.|..++.++.+++.+.-         ...++|++||...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~  153 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA  153 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh
Confidence            368887776422                    113457788888888876531         1247999998754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.46  E-value=3.9e-13  Score=89.26  Aligned_cols=83  Identities=20%  Similarity=0.191  Sum_probs=59.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEE-----------------EcccCCh
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI-----------------EASFADH   66 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~D~~~~   66 (124)
                      +.++||||+++||+++++.|+++|++|++.++++....++..+.+..........+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            45799999999999999999999999999888763222222233332223334444                 4558888


Q ss_pred             HHHHHHhc-------ccCEEEEeCccc
Q 033236           67 RSLVEAVK-------RVDVVICTISGV   86 (124)
Q Consensus        67 ~~~~~~~~-------~~d~vi~~a~~~   86 (124)
                      ++++++++       ++|++|||||..
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~  109 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSF  109 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCcc
Confidence            88888765       489999999854

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.46  E-value=1.6e-13  Score=89.34  Aligned_cols=106  Identities=15%  Similarity=0.151  Sum_probs=74.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh---------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV---------   73 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---------   73 (124)
                      ..+++||||+++||+++++.|+++|++|++++|++...            ......+.+|..+.+......         
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            45789999999999999999999999999999987221            112234556665554433322         


Q ss_pred             cccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236           74 KRVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP  120 (124)
Q Consensus        74 ~~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~  120 (124)
                      .++|++|||||...               .++.|+.++..+++.+.+.- .-.+++++||...
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            23899999998532               13567788888888887642 1258899987653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.43  E-value=6.3e-13  Score=87.64  Aligned_cols=82  Identities=18%  Similarity=0.220  Sum_probs=63.3

Q ss_pred             CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+  .+||.++++.|+++|++|++.+|++    ....+........+...+++|+++++++.++++    
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~----~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR----LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC----HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh----HHHHHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence            568999999964  5799999999999999999999987    332233333334567789999999977766643    


Q ss_pred             ------ccCEEEEeCccc
Q 033236           75 ------RVDVVICTISGV   86 (124)
Q Consensus        75 ------~~d~vi~~a~~~   86 (124)
                            .+|+++||+|..
T Consensus        80 ~~~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             HHCTTCCEEEEEECCCCC
T ss_pred             ccccCCCcceeeeccccc
Confidence                  279999999843

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.41  E-value=1e-12  Score=87.00  Aligned_cols=83  Identities=13%  Similarity=0.187  Sum_probs=64.5

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----   74 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   74 (124)
                      |++|+++||||+|  +||.++++.|+++|++|++.+|++. . ....+.... ......+..+|+++++++.++++    
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~-~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHh-hCCceeEeeecccchhhHHHHHHHHHH
Confidence            5689999999876  8999999999999999999999852 1 122222222 23456788999999988888774    


Q ss_pred             ---ccCEEEEeCccc
Q 033236           75 ---RVDVVICTISGV   86 (124)
Q Consensus        75 ---~~d~vi~~a~~~   86 (124)
                         ++|++|||+|..
T Consensus        80 ~~g~id~lV~nag~~   94 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFA   94 (274)
T ss_dssp             HTSCEEEEEECCCCC
T ss_pred             HcCCCCeEEeecccc
Confidence               389999999854

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=1.3e-11  Score=80.94  Aligned_cols=116  Identities=13%  Similarity=0.061  Sum_probs=77.8

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---   75 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   75 (124)
                      +++|+++||||+|  +||+++++.|+++|++|++.+|++..  .+..+.... ..........|..+.++..+.++.   
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL--KGRVEEFAA-QLGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT--HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHh-hcCCcceeecccchHHHHHHHHHHhhh
Confidence            4689999999998  79999999999999999999998521  111121111 234567888999998887777643   


Q ss_pred             ----cCEEEEeCccccc-------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236           76 ----VDVVICTISGVHF-------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI  119 (124)
Q Consensus        76 ----~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~  119 (124)
                          .|.++|+++....                   ...+..+...+.+++.+.. .-..++++||..
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~  147 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG  147 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGG
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchh
Confidence                7999999875421                   1233455555555554432 124567766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.27  E-value=5.6e-12  Score=83.61  Aligned_cols=102  Identities=20%  Similarity=0.282  Sum_probs=64.5

Q ss_pred             EEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH-HHHH-----hcccCE
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS-LVEA-----VKRVDV   78 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~-----~~~~d~   78 (124)
                      |+||||+|+||+++++.|+++|+ +|+++++-..+....      ......    ..|..+.++ ....     +..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV------NLVDLN----IADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH------HHHTSC----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh------cccccc----hhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999999995 788887544221111      111111    122222222 2222     345789


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ++|.|+...        ....++.++.++++++...+ ++.++.+|+.
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~  118 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAA  118 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGG
T ss_pred             hhhhccccccccccccccccccccccccccccccccc-cccccccccc
Confidence            999886432        13456888999999999988 6655555543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.25  E-value=3.1e-11  Score=78.12  Aligned_cols=104  Identities=19%  Similarity=0.190  Sum_probs=73.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------V   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~   76 (124)
                      .|+++||||+++||+++++.|+++|++|++.+|++              +..+....++|+++......+.+.      .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~--------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR--------------EGEDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--------------CSSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--------------ccccceEeeccccchhhhHHHHHhhhccccc
Confidence            37899999999999999999999999999999987              234567889999998777776543      3


Q ss_pred             CEEEEeCccc------------------cceecchHHHHHHHHHHHHh---------CCccEEEEecCCcc
Q 033236           77 DVVICTISGV------------------HFRSHNILMQLKLVDAIREA---------GNVKKRKLNEGMIP  120 (124)
Q Consensus        77 d~vi~~a~~~------------------~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~ss~~~  120 (124)
                      +.++.+++..                  ...+.|..+...+.+.+...         +.-.++|++||...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~  137 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA  137 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhh
Confidence            4444444321                  01244556666666555432         11358999998653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.24  E-value=1.1e-11  Score=81.42  Aligned_cols=83  Identities=20%  Similarity=0.235  Sum_probs=58.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC----hHHHHHHhc-----
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD----HRSLVEAVK-----   74 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~-----   74 (124)
                      ...+||||+++||+++++.|+++|++|++.+|+.+...+...+............+..|..+    ++.+.++++     
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999973322223333433344566666666643    344444433     


Q ss_pred             --ccCEEEEeCccc
Q 033236           75 --RVDVVICTISGV   86 (124)
Q Consensus        75 --~~d~vi~~a~~~   86 (124)
                        ++|++|||||..
T Consensus        82 ~g~iDilvnnAG~~   95 (266)
T d1mxha_          82 FGRCDVLVNNASAY   95 (266)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCCCEEEECCccC
Confidence              499999999854

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.15  E-value=5.3e-10  Score=66.32  Aligned_cols=95  Identities=18%  Similarity=0.262  Sum_probs=69.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      |+|+|.|+ |.+|+.+++.|.+.|++|+++++++     ...+....  ..+..++.+|.++++.+.++ ++++|+++.+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~-----~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK-----DICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCCh-----hhhhhhhh--hhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            78999997 9999999999999999999999997     22222221  23678999999999999998 5789988886


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEE
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKL  114 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  114 (124)
                      .+..   +.|    ..+...++..+ .+++|-
T Consensus        73 t~~d---~~N----~~~~~~~k~~~-~~~iI~   96 (132)
T d1lssa_          73 TGKE---EVN----LMSSLLAKSYG-INKTIA   96 (132)
T ss_dssp             CSCH---HHH----HHHHHHHHHTT-CCCEEE
T ss_pred             CCcH---HHH----HHHHHHHHHcC-CceEEE
Confidence            5421   123    23344455566 455553

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.10  E-value=6.7e-11  Score=78.78  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=33.5

Q ss_pred             CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++|+++||||+|  +||+++++.|+++|++|++.+|++
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            4578999999876  999999999999999999998864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=99.08  E-value=1.6e-09  Score=64.19  Aligned_cols=72  Identities=22%  Similarity=0.388  Sum_probs=61.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      |+++|.|. |.+|+.+++.|.+.|++|++++.++        +..+.+......++.+|.++++.+.++ ++++|.++..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~--------~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE--------EKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH--------HHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcH--------HHHHHHHHhCCcceeeecccchhhhccCCccccEEEEE
Confidence            56889985 9999999999999999999999998        444444556678889999999999998 7889988887


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        72 ~~   73 (134)
T d2hmva1          72 IG   73 (134)
T ss_dssp             CC
T ss_pred             cC
Confidence            75

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.05  E-value=4.3e-10  Score=73.27  Aligned_cols=65  Identities=20%  Similarity=0.185  Sum_probs=50.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh--------c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV--------K   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~   74 (124)
                      +|.++||||+++||+++++.|+++|++|++.+|++.+                   ...|+.+.+......        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999999987611                   245676665554442        2


Q ss_pred             ccCEEEEeCccc
Q 033236           75 RVDVVICTISGV   86 (124)
Q Consensus        75 ~~d~vi~~a~~~   86 (124)
                      .+|+++++||..
T Consensus        62 ~id~lv~~Ag~~   73 (257)
T d1fjha_          62 GMDGLVLCAGLG   73 (257)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCcEEEEcCCCC
Confidence            489999999854

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.91  E-value=4.4e-10  Score=76.12  Aligned_cols=117  Identities=9%  Similarity=0.035  Sum_probs=70.2

Q ss_pred             CceEEEEc--cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc---------cC-CeEEEEc---------
Q 033236            3 KSKVLVVG--GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK---------KQ-GAHLIEA---------   61 (124)
Q Consensus         3 ~~~ili~G--a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---------~~-~~~~~~~---------   61 (124)
                      +|..+|||  ++++||+++++.|+++|++|++..++............+.+.         .. ......+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            46789999  557999999999999999999988775211111111111110         01 1123333         


Q ss_pred             -----------ccCChHHHHHHhc-------ccCEEEEeCcccc-----c-----------eecchHHHHHHHHHHHHhC
Q 033236           62 -----------SFADHRSLVEAVK-------RVDVVICTISGVH-----F-----------RSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        62 -----------D~~~~~~~~~~~~-------~~d~vi~~a~~~~-----~-----------~~~~~~~~~~~~~~~~~~~  107 (124)
                                 |+.+.++++++++       ++|++||++|...     +           ++.|..+...+.+++.+.-
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       4445554555443       5899999987432     1           2345667777778776642


Q ss_pred             -CccEEEEecCCc
Q 033236          108 -NVKKRKLNEGMI  119 (124)
Q Consensus       108 -~~~~~i~~ss~~  119 (124)
                       .-.++|.+||..
T Consensus       162 ~~~GsIv~iss~~  174 (329)
T d1uh5a_         162 KPQSSIISLTYHA  174 (329)
T ss_dssp             EEEEEEEEEECGG
T ss_pred             ccccccccceeeh
Confidence             124787777543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=9.6e-08  Score=57.59  Aligned_cols=76  Identities=16%  Similarity=0.219  Sum_probs=63.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      .+++|.|. |-+|+.+++.|.+.|+++++++.++    +...+..+.....++.++.+|.++++.++++ +++++.++.+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~----~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccc----hhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence            46889986 8999999999999999999999887    4444455555567899999999999999998 5789999887


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        79 ~~   80 (153)
T d1id1a_          79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cc
Confidence            75

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.85  E-value=9.5e-08  Score=58.42  Aligned_cols=75  Identities=24%  Similarity=0.316  Sum_probs=57.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .|+++|.|| |.+|+.+++.|.++|++|++.+|+.     .+.+.+.. ..........+..+.......+...|.++.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~-----~~a~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTL-----ESAKKLSA-GVQHSTPISLDVNDDAALDAEVAKHDLVISL   74 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCH-----HHHHHHHT-TCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCh-----HHHHHHHh-cccccccccccccchhhhHhhhhccceeEee
Confidence            588999986 9999999999999999999999997     22222211 1233455566777778888888889988876


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        75 ~~   76 (182)
T d1e5qa1          75 IP   76 (182)
T ss_dssp             SC
T ss_pred             cc
Confidence            64

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.73  E-value=2.8e-07  Score=55.18  Aligned_cols=105  Identities=14%  Similarity=0.106  Sum_probs=70.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      |+.|+||+|.+|+.++..|..+|  .++.+++.++     .+.... .+.+. ...-... .....+..+.++++|+|+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~-----~~~~a~-Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVi   74 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-----TPGVAA-DLSHIETRATVKG-YLGPEQLPDCLKGCDVVVI   74 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-----HHHHHH-HHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc-----cchhhH-HHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEE
Confidence            68999999999999999999888  4788888765     222222 11221 1111122 2235667788899999999


Q ss_pred             eCccc--------cceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGV--------HFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+|..        ...+.|..-.+.+++.+.+.++-..++.+|
T Consensus        75 tag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99843        234567888899999999987323445544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.64  E-value=7.2e-08  Score=59.41  Aligned_cols=76  Identities=14%  Similarity=0.128  Sum_probs=51.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-----ccCCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-----KKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      .|++.|.|+ |.+|..++..|.+.|++|.+++|++     ...+.....     .....+..........++.++++++|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA-----QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD   74 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCC
Confidence            478999996 9999999999999999999999986     222222111     11122222222222234677888999


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +++.+..
T Consensus        75 ~iii~v~   81 (184)
T d1bg6a2          75 VILIVVP   81 (184)
T ss_dssp             EEEECSC
T ss_pred             EEEEEEc
Confidence            9998775

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=3.9e-07  Score=56.47  Aligned_cols=81  Identities=17%  Similarity=0.258  Sum_probs=60.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+++++|.|+ |+.|++++..|.+.| .+++++.|+++..+.. ....+.+. .-.......|+.+.+.+.....++|++
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA-LAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH-HHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHH-HHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            3578999996 899999999999998 5888999987443221 12222222 233456678899999999999999999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ||+.+
T Consensus        95 IN~Tp   99 (182)
T d1vi2a1          95 TNGTK   99 (182)
T ss_dssp             EECSS
T ss_pred             ccccC
Confidence            99975

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=5.5e-07  Score=53.93  Aligned_cols=107  Identities=15%  Similarity=0.066  Sum_probs=65.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhh-CC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLA-QG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~-~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ||+.|+|++|.+|+.++..|.. .+  .++.+++..+ .......+.. +.........   +...++. +.+++.|+||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~-h~~~~~~~~~---~~~~~~~-~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS-HIPTAVKIKG---FSGEDAT-PALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHH-TSCSSCEEEE---ECSSCCH-HHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHH-CCccccCCcE---EEcCCCc-cccCCCCEEE
Confidence            6899999999999999988754 34  7888888754 1111111211 1111111111   1122223 3577899999


Q ss_pred             EeCccc--------cceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           81 CTISGV--------HFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        81 ~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .++|..        +....|..-.+.+.+.+.+.++-..++.+|
T Consensus        75 itaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          75 ISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            999843        234567888889999999887323445554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.54  E-value=4.7e-07  Score=54.29  Aligned_cols=105  Identities=18%  Similarity=0.237  Sum_probs=67.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +||+.|.|+ |.+|..++..|+.+|  .++.++++++........+..... .........+|+   +    .++++|+|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adiv   76 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADLV   76 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccEE
Confidence            568999995 999999999999887  689999987621111111221111 122344555554   2    35789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEE-Eec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRK-LNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i-~~s  116 (124)
                      +.++|...        ....|..-.+.+++.+.+.+ .+.++ .+|
T Consensus        77 vitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvt  121 (146)
T d1ez4a1          77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA  121 (146)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred             EEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence            99987432        23456777888999998887 44444 444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.52  E-value=9.6e-07  Score=52.82  Aligned_cols=108  Identities=17%  Similarity=0.103  Sum_probs=68.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCC--chHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGL--DIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      ||+.|+||+|.+|..++..|+.++  .++.++++++.-.  +....+...  .....+......--.+.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            679999999999999999999988  5888888875211  011112111  11122333322111122    4667899


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +||.+||..+        ....|..-.+.+++.+.+.+ .+.++.+|
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivVt  122 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEEc
Confidence            9999998542        23467777888889998887 45665554

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=5e-07  Score=54.16  Aligned_cols=84  Identities=17%  Similarity=0.228  Sum_probs=49.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++.|.||||++|+.+++.|+++.    .+++++.++++...     . ..+....  ....+..+.+    .++++|++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~-----~-~~~~~~~--~~~~~~~~~~----~~~~~Div   69 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQA-----A-PSFGGTT--GTLQDAFDLE----ALKALDII   69 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB-----C-CGGGTCC--CBCEETTCHH----HHHTCSEE
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccc-----c-ccccCCc--eeeecccchh----hhhcCcEE
Confidence            689999999999999999887653    36666665542210     0 0111111  1122222332    24678888


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |.+++        ..-.....+.+.+.|
T Consensus        70 F~a~~--------~~~s~~~~~~~~~~g   89 (146)
T d1t4ba1          70 VTCQG--------GDYTNEIYPKLRESG   89 (146)
T ss_dssp             EECSC--------HHHHHHHHHHHHHTT
T ss_pred             EEecC--------chHHHHhhHHHHhcC
Confidence            88886        233455666666666

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=98.45  E-value=1.2e-06  Score=51.21  Aligned_cols=70  Identities=19%  Similarity=0.306  Sum_probs=55.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~   82 (124)
                      |+++|.|. |.+|+.+++.|  +++++.++..++        +..+.....++.++.+|.++++.+.++ +++++.++.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~--------~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDE--------NVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCT--------THHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcch--------HHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            57899985 89999999998  466788888877        222233456889999999999999998 6789999887


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      ..
T Consensus        70 ~~   71 (129)
T d2fy8a1          70 LE   71 (129)
T ss_dssp             CS
T ss_pred             cc
Confidence            65

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.44  E-value=1.5e-07  Score=58.02  Aligned_cols=34  Identities=32%  Similarity=0.542  Sum_probs=32.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ||+.|+||+|.+|+++++.|++.|++|++.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            6799998889999999999999999999999987

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.42  E-value=2.3e-06  Score=50.93  Aligned_cols=104  Identities=14%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +|+.|+|+ |.+|..++..++.++  .++.++++++........+....... .......+|   .    +.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceEE
Confidence            57999996 999999999999887  48999998875544444443332221 122232222   2    3467899999


Q ss_pred             EeCcccc--------ceecchHHHHHHHHHHHHhCCccE-EEEec
Q 033236           81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKK-RKLNE  116 (124)
Q Consensus        81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~i~~s  116 (124)
                      ..+|...        ....|..-.+.+++.+.+.+ .+- ++.+|
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccC-CCceEEEec
Confidence            9998542        23456777888889998887 344 44443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.39  E-value=5e-06  Score=49.77  Aligned_cols=106  Identities=17%  Similarity=0.308  Sum_probs=68.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      ++|+.|+|+ |.+|..++..|+..+  .++.++++++........+....  +......+...|.       +.++++|+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDv   77 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADL   77 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcccee
Confidence            458999996 999999999999887  47999998763222222222211  1223444444443       34678999


Q ss_pred             EEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           79 VICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        79 vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+.++|..+        ....|..-.+.+++.+.+.++-..++.+|
T Consensus        78 vvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            999988432        23456777788888888887323444544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.38  E-value=1.8e-06  Score=52.38  Aligned_cols=33  Identities=30%  Similarity=0.365  Sum_probs=30.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.|.|. |.+|..+++.|.+.|++|++.+|++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCc
Confidence            67999985 9999999999999999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=7.5e-07  Score=54.58  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=51.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH---hc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA---VK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~--~~d   77 (124)
                      +.+++|+||+|.+|...++.+...|.+|+++++++     .+.+....+   +...+ .|.++++..+++   ..  ++|
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~-----~~~~~~~~~---Ga~~v-i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTE-----EGQKIVLQN---GAHEV-FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHT---TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCEEEEEeccccccccccccccccCcccccccccc-----ccccccccc---Ccccc-cccccccHHHHhhhhhccCCce
Confidence            56899999999999999999988999999999875     333444332   22221 366665544443   22  489


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999887

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.34  E-value=2.7e-06  Score=50.52  Aligned_cols=102  Identities=18%  Similarity=0.195  Sum_probs=65.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ||+.|.|+ |.+|..++..++.++  .++.++++++........+...... .........|   .    +.++++|+|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            68999996 999999999888876  5889999876322222222222211 2233443333   2    3467899999


Q ss_pred             EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEE
Q 033236           81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKL  114 (124)
Q Consensus        81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~  114 (124)
                      .++|..+-        ...|..-.+.+++.+.+.+ .+-++.
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~-p~aivi  113 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVI  113 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcC-CCcEEE
Confidence            99985432        2346666788888888887 344443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.33  E-value=7.8e-07  Score=54.97  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=62.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccC--CeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQ--GAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      |+|.|.|+ |..|.+++..|.+.|++|.+..|..+   ++..+..... ..+  ....-..++.-.+++.++++++|+|+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~---~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD---TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG---HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc---HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhh
Confidence            78999996 99999999999999999999988541   1122222111 111  11111223344677899999999999


Q ss_pred             EeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+.+.        .+.+.+++.+.+.-.-+.++.++
T Consensus        77 ~avps--------~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          77 LGVST--------DGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             ECSCG--------GGHHHHHHHHTTTCCSCEEEECC
T ss_pred             cccch--------hhhHHHHHhhccccccceecccc
Confidence            87762        33455565555543223444444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=5.1e-07  Score=55.64  Aligned_cols=73  Identities=25%  Similarity=0.349  Sum_probs=51.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHh--cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAV--KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d   77 (124)
                      +.+++|+||+|.+|...++.+...|.+++++++++     .+.+.+..   .+...+ .|..+++   .+.+..  +++|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~-----~~~~~l~~---~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD-----AKREMLSR---LGVEYV-GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHT---TCCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeeccc-----cccccccc---cccccc-ccCCccCHHHHHHHHhCCCCEE
Confidence            46899999999999999999988999999999876     33343333   333322 2444543   444443  3599


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999998

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.32  E-value=1.3e-06  Score=54.92  Aligned_cols=73  Identities=18%  Similarity=0.307  Sum_probs=48.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc-------------CChHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF-------------ADHRSLV   70 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------------~~~~~~~   70 (124)
                      |+|.|.| .|++|..++..|++.|++|++++.++     .   ..+.+......+.+-++             .-..++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~-----~---~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS-----T---KIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH-----H---HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCH-----H---HHHHhcccCCcccchhhhhhhhhhhcccccccCCCHH
Confidence            6799997 59999999999999999999999886     2   22222222111111111             1113455


Q ss_pred             HHhcccCEEEEeCcc
Q 033236           71 EAVKRVDVVICTISG   85 (124)
Q Consensus        71 ~~~~~~d~vi~~a~~   85 (124)
                      ++++.+|+++.|.+.
T Consensus        72 ~~i~~~d~i~i~VpT   86 (202)
T d1mv8a2          72 KAVLDSDVSFICVGT   86 (202)
T ss_dssp             HHHHTCSEEEECCCC
T ss_pred             HHHhhCCEEEEecCc
Confidence            666779999999874

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.31  E-value=3.3e-06  Score=50.92  Aligned_cols=106  Identities=15%  Similarity=0.096  Sum_probs=67.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .+|+.|.|+ |.+|+.++..|...+ .++.+++.++........+.....  ..........     .+...+++++|+|
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~adiV   80 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGADCV   80 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCCCeE
Confidence            457999997 999999998888877 588888887633222222222211  1112222211     2235677899999


Q ss_pred             EEeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +.++|..+             ....|..-.+.+++.+.+.+ .+-++.+
T Consensus        81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aivii  128 (154)
T d1pzga1          81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIV  128 (154)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEEEE
Confidence            99997431             23356677888899998888 4544443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.31  E-value=6e-07  Score=55.46  Aligned_cols=75  Identities=16%  Similarity=0.236  Sum_probs=51.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEE-cccCChHHHHHHhc--ccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIE-ASFADHRSLVEAVK--RVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~-~D~~~~~~~~~~~~--~~d   77 (124)
                      ++.+++|+||+|.+|...++.....|++|+++++++     ++.+....   .+.. ++. -|-...+.+.+...  ++|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~-----~~~~~~~~---~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd  100 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD-----EKIAYLKQ---IGFDAAFNYKTVNSLEEALKKASPDGYD  100 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHH---TTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH-----HHHHHHHh---hhhhhhcccccccHHHHHHHHhhcCCCc
Confidence            357899999999999999999999999999999886     33333333   2322 222 22223344444433  599


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +|+.+.|
T Consensus       101 ~v~D~vG  107 (182)
T d1v3va2         101 CYFDNVG  107 (182)
T ss_dssp             EEEESSC
T ss_pred             eeEEecC
Confidence            9999987

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.1e-07  Score=59.51  Aligned_cols=99  Identities=21%  Similarity=0.280  Sum_probs=60.0

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh---hhcc-CCe----------EEEEcccCCh
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL---SFKK-QGA----------HLIEASFADH   66 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~-~~~----------~~~~~D~~~~   66 (124)
                      |+.+++.|.|+ |.+|+.++..++..|++|++.++++...+........   .... ...          ......+.-.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            67889999996 9999999999999999999999997332211111110   0000 100          0000111122


Q ss_pred             HHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHh
Q 033236           67 RSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREA  106 (124)
Q Consensus        67 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~  106 (124)
                      .++..++.++|.|+=+..      .+..--..+++.+.+.
T Consensus        81 ~d~~~a~~~ad~ViEav~------E~l~~K~~v~~~l~~~  114 (192)
T d1f0ya2          81 TDAASVVHSTDLVVEAIV------ENLKVKNELFKRLDKF  114 (192)
T ss_dssp             SCHHHHTTSCSEEEECCC------SCHHHHHHHHHHHTTT
T ss_pred             chhHhhhcccceehhhcc------cchhHHHHHHHHHhhh
Confidence            345667778898888775      4444455566666554

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.29  E-value=1.2e-06  Score=53.70  Aligned_cols=73  Identities=26%  Similarity=0.321  Sum_probs=50.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++|+||+|.+|...++.+...|.+|+++++++     .+.+....   .+...+ .|..+...-...-+++|+++.+
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~-----~~~~~~~~---lGa~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP-----EKLALPLA---LGAEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG-----GGSHHHHH---TTCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCEEEEEeccccchhhhhhhhcccccccccccccc-----cccccccc---ccccee-eehhhhhhhhhccccccccccc
Confidence            56899999999999999999888999999999876     22233322   222222 2444433333344579999998


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            77

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=2.8e-07  Score=55.78  Aligned_cols=34  Identities=32%  Similarity=0.363  Sum_probs=31.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      |||.|.|+ |.+|..++..|.+.|++|++++|++.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            78999997 99999999999999999999999873

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.26  E-value=6.8e-06  Score=48.93  Aligned_cols=94  Identities=18%  Similarity=0.135  Sum_probs=53.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      +.|+|.|.||+|++|+.+++.|.+.+   .++..+..+.+.-     +   ......-+...-+..     ...++++|+
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G-----k---~i~~~~~~~~~~~~~-----~~~~~~~d~   67 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-----Q---RMGFAESSLRVGDVD-----SFDFSSVGL   67 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-----C---EEEETTEEEECEEGG-----GCCGGGCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC-----c---ceeeccccchhccch-----hhhhccceE
Confidence            35889999999999999999997644   4666654443110     0   111111111111111     122456898


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM  118 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~  118 (124)
                      ++.+++        ..........+.+.+  .++|-.|+.
T Consensus        68 vf~a~p--------~~~s~~~~~~~~~~g--~~VID~Ss~   97 (144)
T d2hjsa1          68 AFFAAA--------AEVSRAHAERARAAG--CSVIDLSGA   97 (144)
T ss_dssp             EEECSC--------HHHHHHHHHHHHHTT--CEEEETTCT
T ss_pred             EEecCC--------cchhhhhccccccCC--ceEEeechh
Confidence            888776        233455566666666  356655543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.25  E-value=3.8e-06  Score=49.90  Aligned_cols=102  Identities=18%  Similarity=0.116  Sum_probs=65.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ||+.|+|+ |.+|..++..|+..+  .++.++++++........+....  .......+...  .+.    +.++++|++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            67999996 999999999999887  58999998874322222222111  11223334322  222    346789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEE
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      +.++|..+        ....|..-.+.+++.+.+.+ .+-++
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~-p~aiv  114 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPII  114 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEE
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC-CCeEE
Confidence            99998432        23456666788888888887 34443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.23  E-value=1e-05  Score=48.35  Aligned_cols=93  Identities=24%  Similarity=0.278  Sum_probs=51.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |++.|.||+|++|+.+++.|+++.    .++..+..+.+...      ...+.......  .+..+.+    .++++|++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk------~~~~~~~~~~~--~~~~~~~----~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP------APNFGKDAGML--HDAFDIE----SLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB------CCCSSSCCCBC--EETTCHH----HHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc------ccccCCcceee--ecccchh----hhccccEE
Confidence            679999999999999999887643    35555544432111      01111111111  1122322    24678988


Q ss_pred             EEeCccccceecchHHHHHHHHHHHHhCCcc-EEEEecC
Q 033236           80 ICTISGVHFRSHNILMQLKLVDAIREAGNVK-KRKLNEG  117 (124)
Q Consensus        80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss  117 (124)
                      |.+.+        ..-...+.+.+.+.+ .+ .+|-.|+
T Consensus        69 F~alp--------~~~s~~~~~~l~~~g-~~~~VIDlSs   98 (147)
T d1mb4a1          69 ITCQG--------GSYTEKVYPALRQAG-WKGYWIDAAS   98 (147)
T ss_dssp             EECSC--------HHHHHHHHHHHHHTT-CCSEEEESSS
T ss_pred             EEecC--------chHHHHHhHHHHHcC-CceEEEeCCc
Confidence            88886        222456666666666 33 3444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.22  E-value=1.1e-05  Score=48.95  Aligned_cols=75  Identities=23%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEccc--CChHHHHHHh-----cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASF--ADHRSLVEAV-----KR   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~-----~~   75 (124)
                      +.+++|+| +|.+|...++.+...|.+|+++++++     .+.+....+...  ..+..|.  .+.+...+.+     .+
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~-----~r~~~a~~~ga~--~~~~~~~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP-----RRLEVAKNCGAD--VTLVVDPAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTTCS--EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHH-----HHHHHHHHcCCc--EEEeccccccccchhhhhhhcccccC
Confidence            46789997 69999999998888999999999987     444444443222  2233333  2333443333     24


Q ss_pred             cCEEEEeCcc
Q 033236           76 VDVVICTISG   85 (124)
Q Consensus        76 ~d~vi~~a~~   85 (124)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            8999999983

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.22  E-value=1.5e-06  Score=52.37  Aligned_cols=109  Identities=18%  Similarity=0.119  Sum_probs=63.4

Q ss_pred             CC-CceEEEEccCChhcHHHHHHHhhCCC-----eE--EEEeCCCCCCchHHHHHhhhh-cc---CCeEEEEcccCChHH
Q 033236            1 MG-KSKVLVVGGTGYIGRRIVKASLAQGH-----ET--YVLQRPDIGLDIDKLQMLLSF-KK---QGAHLIEASFADHRS   68 (124)
Q Consensus         1 m~-~~~ili~Ga~g~iG~~l~~~l~~~g~-----~v--~~~~r~~~~~~~~~~~~~~~~-~~---~~~~~~~~D~~~~~~   68 (124)
                      |+ .+|+.|+||+|.+|++++..|+..+.     .+  .++.-..   .....+..... ..   .....+..    .+.
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   73 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ---AMKALEGVVMELEDCAFPLLAGLEA----TDD   73 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG---GHHHHHHHHHHHHTTTCTTEEEEEE----ESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcccc---chhhHcCchhhhhcccccccccccc----CCc
Confidence            55 45999999999999999999987652     12  2222211   11222221111 11   12222222    223


Q ss_pred             HHHHhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           69 LVEAVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        69 ~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      ..+.++++|+|+.++|..+        ....|..-.+.+.+.+.+..+.. .++.+|
T Consensus        74 ~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          74 PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            4578889999999998542        23456777788888888854222 444555

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.22  E-value=2.8e-06  Score=51.52  Aligned_cols=71  Identities=25%  Similarity=0.436  Sum_probs=52.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|+|+ |.+|+.+++.|...|. ++++..|+.    +...+....+   +..+     .+.+++.+.+.++|+||
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~----~ka~~l~~~~---~~~~-----~~~~~~~~~l~~~Divi   89 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY----ERAVELARDL---GGEA-----VRFDELVDHLARSDVVV   89 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH----HHHHHHHHHH---TCEE-----CCGGGHHHHHHTCSEEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcH----HHHHHHHHhh---hccc-----ccchhHHHHhccCCEEE
Confidence            4688999997 9999999999999996 688888886    2222222222   2232     23467788888999999


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      ++.+.
T Consensus        90 ~atss   94 (159)
T d1gpja2          90 SATAA   94 (159)
T ss_dssp             ECCSS
T ss_pred             EecCC
Confidence            99874

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.20  E-value=6.3e-06  Score=49.00  Aligned_cols=104  Identities=15%  Similarity=0.133  Sum_probs=66.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCC--CchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIG--LDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~--~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      |+.|+|++|.+|..++..+..++  .++.+++.+...  ......+...... .....+...|+   +    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            68999999999999999999887  478888764311  1111222222111 23344444443   3    24689999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEE-EEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKR-KLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-i~~s  116 (124)
                      +..+|..+        ..+.|..-.+.+++.+.+.+ .+-+ +.+|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCceEEEec
Confidence            99998432        23457777888888888887 3433 4443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.19  E-value=5.8e-07  Score=56.09  Aligned_cols=77  Identities=13%  Similarity=0.284  Sum_probs=51.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-cc----CCeEEEEcccCChHHHHHHhcc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KK----QGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      |.+++|.|.|+ |.-|.+++..|.+.|++|++..|++     +..+.+... .+    +++. +.-++.-..++.+++++
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~-----~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~   77 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE-----EEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNG   77 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCH-----HHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTT
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecH-----HHHHHHhhcccccccccccc-cccccccchhhhhccCC
Confidence            34567999995 9999999999999999999999986     222222111 11    1111 11122223467888999


Q ss_pred             cCEEEEeCc
Q 033236           76 VDVVICTIS   84 (124)
Q Consensus        76 ~d~vi~~a~   84 (124)
                      +|+|+.+.+
T Consensus        78 ad~iiiavP   86 (189)
T d1n1ea2          78 AEIILFVIP   86 (189)
T ss_dssp             CSCEEECSC
T ss_pred             CCEEEEcCc
Confidence            999988775

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.19  E-value=1e-05  Score=48.30  Aligned_cols=101  Identities=17%  Similarity=0.294  Sum_probs=64.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +|+.|+|+ |.+|..++..|+.+|  .++.++++++........+......  .........|   .    +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            68999995 999999999998877  5888888876222122222222211  2233444443   3    235789999


Q ss_pred             EEeCcccc------------ceecchHHHHHHHHHHHHhCCccEEE
Q 033236           80 ICTISGVH------------FRSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        80 i~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      |.++|..+            ....|..-.+.+++.+.+.+ .+-++
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aiv  118 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVL  118 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEE
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEE
Confidence            99998532            12346677788888888877 34443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=1e-05  Score=46.07  Aligned_cols=67  Identities=15%  Similarity=0.256  Sum_probs=53.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   81 (124)
                      .++.|.|+ |.+|+-++.+..+.|+++++++.++..+..          .-.-.++.+|+.|.+.+.++.+  ++|+|..
T Consensus        12 ~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          12 TRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            57999995 999999999999999999999988733211          1123688999999999999875  5798855

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.17  E-value=4.5e-06  Score=49.62  Aligned_cols=102  Identities=13%  Similarity=0.121  Sum_probs=63.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ||+.|+|+ |.+|..++..++.+|  .++.++++++........+....  .......+...+  |.    +.+++.|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence            68999996 999999999998877  57899988762221112222211  112223333221  22    267789999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEE
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      +..+|..+        ....|..-.+.+++.+.+.+ .+.++
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-p~aiv  114 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKI  114 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEE
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC-CCcEE
Confidence            99988432        23456667777888888877 34443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.16  E-value=1.7e-05  Score=48.04  Aligned_cols=106  Identities=13%  Similarity=0.128  Sum_probs=67.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      +++|+.|.|+ |.+|..++..|..+|  -++.++++++.....+..+....  +.......-..|   .+    .++++|
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~----~~~~ad   90 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YS----VTANSK   90 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GG----GGTTCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hh----hccccc
Confidence            3568999996 999999999999998  48888888762222222222211  112222222233   22    366899


Q ss_pred             EEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccE-EEEec
Q 033236           78 VVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKK-RKLNE  116 (124)
Q Consensus        78 ~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~i~~s  116 (124)
                      +|+..+|..+        ..+.|..-.+.+++.+.+.+ .+- ++.+|
T Consensus        91 iVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aiiivvt  137 (160)
T d1i0za1          91 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCIIIVVS  137 (160)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred             EEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence            9999998542        23456777788888888887 443 44444

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=9.6e-06  Score=49.06  Aligned_cols=108  Identities=16%  Similarity=0.171  Sum_probs=66.4

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhccc
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      |...|+.|+|+ |.+|..++..|...|  .++.++++++........+.....  ..........|+       +.++++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            34568999996 999999999999887  489999887622111222222111  112222223332       345679


Q ss_pred             CEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           77 DVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        77 d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      |+|+..+|..+        ..+.|..-.+.+++.+.+.++-..++.+|
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            99999998432        23557777778888888877322344444

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=2e-06  Score=52.68  Aligned_cols=74  Identities=18%  Similarity=0.163  Sum_probs=52.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc--ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK--RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d   77 (124)
                      +.+++|+||+|.+|...++.....|.+|+++++++     .+.+....+...  ++  .|..+++   .+.++.+  ++|
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~-----~k~~~~~~lGa~--~v--i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA-----QKAQSALKAGAW--QV--INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHHHTCS--EE--EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccch-----HHHHHHHhcCCe--EE--EECCCCCHHHHHHHHhCCCCeE
Confidence            56899999999999999999988999999999987     444444443211  23  3565554   3444433  389


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +++.+.+.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99998874

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.12  E-value=9.7e-06  Score=48.94  Aligned_cols=33  Identities=30%  Similarity=0.398  Sum_probs=30.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|.+.| .|..|..+++.|++.|++|++.+|++
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~   33 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNP   33 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            5799998 59999999999999999999999987

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.12  E-value=6.8e-05  Score=42.47  Aligned_cols=87  Identities=18%  Similarity=0.229  Sum_probs=60.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      ++++++|.|+ |.+|.+-++.|++.|.+|++++...+    .....  .....++++..-++.+.+     +++.+.|+.
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~----~~~~~--~~~~~~i~~~~~~~~~~d-----l~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI----PQFTV--WANEGMLTLVEGPFDETL-----LDSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC----HHHHH--HHTTTSCEEEESSCCGGG-----GTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC----hHHHH--HHhcCCceeeccCCCHHH-----hCCCcEEee
Confidence            4789999996 99999999999999999999887652    11111  113457888887765432     456887776


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.       ..-...+.+.+++.+
T Consensus        79 at~d-------~~~n~~i~~~a~~~~   97 (113)
T d1pjqa1          79 ATDD-------DTVNQRVSDAAESRR   97 (113)
T ss_dssp             CCSC-------HHHHHHHHHHHHHTT
T ss_pred             cCCC-------HHHHHHHHHHHHHcC
Confidence            6542       223446777777776

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=5.6e-06  Score=50.50  Aligned_cols=71  Identities=14%  Similarity=0.207  Sum_probs=47.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|.|+ |+.+++++..|.+.|.+|+++.|+.    +........+.. ..++.+..|  +.     ...++|++|
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~----~ka~~l~~~~~~~~~~~~~~~~--~~-----~~~~~dliI   84 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV----SRAEELAKLFAHTGSIQALSMD--EL-----EGHEFDLII   84 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH----HHHHHHHHHTGGGSSEEECCSG--GG-----TTCCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchH----HHHHHHHHHHhhcccccccccc--cc-----cccccceee
Confidence            4689999996 9999999999999999999999987    222232323222 233333322  11     124689999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      |+.+
T Consensus        85 N~Tp   88 (170)
T d1nyta1          85 NATS   88 (170)
T ss_dssp             ECCS
T ss_pred             cccc
Confidence            9874

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=98.10  E-value=4.2e-06  Score=49.77  Aligned_cols=103  Identities=11%  Similarity=0.124  Sum_probs=64.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhh--hccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLS--FKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++|+.|+|+ |.+|..++..|+.++ .++.+++.++........+....  .......+...  .|.+    .+++.|++
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advv   73 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVI   73 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEE
Confidence            368999996 999999999998877 58888888763322222222211  12223333322  1222    34679999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEE
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      +.++|...        ....|..-.+++++.+.+.+ .+-++
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~-p~aiv  114 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVI  114 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGGC-TTCEE
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccC-CCceE
Confidence            99998432        23456777788888888877 34443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.10  E-value=1.9e-06  Score=53.10  Aligned_cols=74  Identities=18%  Similarity=0.249  Sum_probs=47.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHh--cccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAV--KRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~v   79 (124)
                      +.+++|+||+|++|...++.....|.+|+++++++     .+.+....+...  .++  |..+. +...+..  +++|+|
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~-----~k~~~~~~lGa~--~vi--~~~~~~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA-----AEHDYLRVLGAK--EVL--AREDVMAERIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT-----TCHHHHHHTTCS--EEE--ECC---------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCch-----HHHHHHHhcccc--eee--ecchhHHHHHHHhhccCcCEE
Confidence            45799999999999999999989999999999987     223333332211  122  33221 1222222  259999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      +.+.|.
T Consensus       103 id~vgg  108 (176)
T d1xa0a2         103 VDPVGG  108 (176)
T ss_dssp             EECSTT
T ss_pred             EEcCCc
Confidence            999984

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.08  E-value=2.3e-05  Score=48.09  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=54.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEE-eCCCCCCchHHH-HHhhhhcc-CCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVL-QRPDIGLDIDKL-QMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~-~r~~~~~~~~~~-~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      |+++.|.||+|++|+.+++.|.++. .++..+ .++......+.. ...+.+.. ........     ++.....+++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM-----SDVRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE-----SCGGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc-----hhhhhhhcccce
Confidence            4789999999999999999999975 676544 333211111111 11111111 11111111     112233457898


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      ++.+.+        ............+.+  .++|-.|+
T Consensus        76 vf~alp--------~~~s~~~~~~~~~~~--~~vIDlSa  104 (179)
T d2g17a1          76 VFLATA--------HEVSHDLAPQFLQAG--CVVFDLSG  104 (179)
T ss_dssp             EEECSC--------HHHHHHHHHHHHHTT--CEEEECSS
T ss_pred             eecccc--------chhHHHHhhhhhhcC--ceeecccc
Confidence            888876        222344555666666  35665553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.08  E-value=3.6e-05  Score=45.78  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=33.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++.|.|+.|.+|+.+++.|.+.|++|.+.+|++
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            46899999899999999999999999999999987

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=1.7e-05  Score=50.45  Aligned_cols=75  Identities=12%  Similarity=0.215  Sum_probs=52.7

Q ss_pred             CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236            1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA   64 (124)
Q Consensus         1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   64 (124)
                      +.+++++||+|                +|..|.++++++...|++|+++.-..+.           ..+.++..+...  
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~~~~--   70 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRVDVM--   70 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEEECC--
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccceeh--
Confidence            35678888775                7999999999999999999998765411           113456665543  


Q ss_pred             ChH----HHHHHhcccCEEEEeCccccc
Q 033236           65 DHR----SLVEAVKRVDVVICTISGVHF   88 (124)
Q Consensus        65 ~~~----~~~~~~~~~d~vi~~a~~~~~   88 (124)
                      ..+    .+.+.+++.|++|++|+...+
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhhh
Confidence            333    334445679999999986544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=1.3e-05  Score=43.99  Aligned_cols=85  Identities=16%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+|+++|.|. |..|..+++.|.+.|++|++.+.++.....   +   . ......+..... +.+    .++++|.+|.
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~---~---~-~~~~~~~~~~~~-~~~----~~~~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL---D---K-LPEAVERHTGSL-NDE----WLMAADLIVA   70 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG---G---G-SCTTSCEEESBC-CHH----HHHHCSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH---H---H-Hhhccceeeccc-chh----hhccCCEEEE
Confidence            4789999997 889999999999999999999987632211   1   1 123444444443 222    3456899999


Q ss_pred             eCccccceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ..|..    .+    ..+++.+.+.|
T Consensus        71 SPGi~----~~----~~~~~~a~~~g   88 (93)
T d2jfga1          71 SPGIA----LA----HPSLSAAADAG   88 (93)
T ss_dssp             CTTSC----TT----SHHHHHHHHTT
T ss_pred             CCCCC----CC----CHHHHHHHHcC
Confidence            88742    11    24666777776

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=1.1e-06  Score=54.28  Aligned_cols=34  Identities=18%  Similarity=0.328  Sum_probs=31.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++|+||+|++|...++.....|++|+++++++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~   66 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecch
Confidence            3799999999999999999999999999999987

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.02  E-value=6.4e-05  Score=44.87  Aligned_cols=106  Identities=14%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++|+.|.|+ |.+|..++..+...+ .++.++++++........+...  .+...+..+...+  +.    +.+++.|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence            468999995 999999998887777 6888888876332222222221  1222333333332  22    345679999


Q ss_pred             EEeCcccc-------------ceecchHHHHHHHHHHHHhCCccEE-EEec
Q 033236           80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKR-KLNE  116 (124)
Q Consensus        80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-i~~s  116 (124)
                      +.++|..+             ....|..-.+.+++.+.+.+ .+-+ +.+|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence            99998432             13456777788888888887 4444 4443

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=98.01  E-value=1.8e-05  Score=47.23  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=44.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      |+|.|.| .|.+|+.+++.|++.|++|++.+++++...   ......   .+  +.       ++..++++++|+|+.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~---~~~~~~---~~--~~-------~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPST---IERART---VG--VT-------ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHH---HHHHHH---HT--CE-------ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHH---HHhhhc---cc--cc-------ccHHHHHhhcCeEEEEe
Confidence            6789998 599999999999999999998887763211   111111   11  11       12345677899888887


Q ss_pred             cc
Q 033236           84 SG   85 (124)
Q Consensus        84 ~~   85 (124)
                      .+
T Consensus        65 ~~   66 (152)
T d1i36a2          65 TP   66 (152)
T ss_dssp             CG
T ss_pred             cC
Confidence            64

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=5.3e-06  Score=44.17  Aligned_cols=35  Identities=17%  Similarity=0.323  Sum_probs=32.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++++|+||+|++|...++.+...|++|+++++++
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            46799999999999999998888999999999987

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.98  E-value=1.2e-05  Score=49.42  Aligned_cols=105  Identities=11%  Similarity=0.049  Sum_probs=62.6

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-----C--eEEEEeCCCCCCchHHHHHhh-hhcc---CCeEEEEcccCChHHHHHHh
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-----H--ETYVLQRPDIGLDIDKLQMLL-SFKK---QGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-----~--~v~~~~r~~~~~~~~~~~~~~-~~~~---~~~~~~~~D~~~~~~~~~~~   73 (124)
                      +|.|+||+|.+|..++..|++.+     .  .+.+++....   ....+... .+.+   .....+..    ..+..+.+
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~---~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~   98 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS---FQALEGVAMELEDSLYPLLREVSI----GIDPYEVF   98 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc---cchhcchhhhhcccccccccCccc----cccchhhc
Confidence            69999999999999999998743     2  3444444431   11111111 1111   22222111    22356788


Q ss_pred             cccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCc-cEEEEec
Q 033236           74 KRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNV-KKRKLNE  116 (124)
Q Consensus        74 ~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~s  116 (124)
                      +++|+||..+|..+        ....|..-.+.+.+++.+..+. -+++.++
T Consensus        99 ~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999998542        2345677788888888886422 2455554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.97  E-value=2.4e-05  Score=46.46  Aligned_cols=105  Identities=17%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .|+.|+|+ |.+|..++..+..++  .++.++++++........+...  .+. ....+...+  +.    +.++++|+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~-~~~~i~~~~--~~----~~~~daDvV   73 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFY-PTVSIDGSD--DP----EICRDADMV   73 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGS-TTCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccC-CCceeecCC--CH----HHhhCCcEE
Confidence            57899996 999999999999887  4888888876221111111111  111 122333222  22    246679999


Q ss_pred             EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +..+|..+        ....|..-.+.+++.+.+.++-..++.+|
T Consensus        74 VitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          74 VITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99998543        23456777788888888887323344444

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.97  E-value=5.5e-06  Score=51.33  Aligned_cols=34  Identities=21%  Similarity=0.340  Sum_probs=31.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++.|.|+ |.+|+.++..++..|++|++.++++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999996 9999999999999999999999987

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=2.5e-05  Score=47.25  Aligned_cols=73  Identities=19%  Similarity=0.247  Sum_probs=53.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++|.|+ |.+|...++.+...|.+++++++++     .+.+....+...  .  ..|..+++......+++|+++.+
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~-----~~~~~a~~lGad--~--~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE-----AKREAAKALGAD--E--VVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHTCS--E--EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccch-----hHHHHHhccCCc--E--EEECchhhHHHHhcCCCceeeee
Confidence            568999985 9999999988888999999888876     333333333222  1  24667777777777789999999


Q ss_pred             Ccc
Q 033236           83 ISG   85 (124)
Q Consensus        83 a~~   85 (124)
                      .|.
T Consensus       101 ~g~  103 (168)
T d1uufa2         101 VAA  103 (168)
T ss_dssp             CSS
T ss_pred             eec
Confidence            874

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.93  E-value=0.00021  Score=43.41  Aligned_cols=74  Identities=14%  Similarity=0.311  Sum_probs=46.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      ..+|.+.| .|..|..+++.|++.|++|++.+|++     .+.+.+............  ....+++..+....|.++.+
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~-----~~~~~l~~~~~~~~~~~~--a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTV-----SKVDDFLANEAKGTKVLG--AHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSST-----HHHHHHHHTTTTTSSCEE--CSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCH-----HHHHHHHHhccccccccc--hhhhhhhhhhhcccceEEEe
Confidence            35788998 59999999999999999999999998     222222111111111111  23455666666666666665


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      ..
T Consensus        74 ~~   75 (176)
T d2pgda2          74 VK   75 (176)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.90  E-value=1e-05  Score=49.13  Aligned_cols=72  Identities=28%  Similarity=0.285  Sum_probs=48.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC-ChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA-DHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~   81 (124)
                      +.+++|.|+ |.+|...++.+...|.+|+++++++     .+.+....+...  +++  |.. +.+..++..++.|+++.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~-----~k~~~a~~lGa~--~~i--~~~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS-----RKREDAMKMGAD--HYI--ATLEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS-----TTHHHHHHHTCS--EEE--EGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccch-----hHHHHhhccCCc--EEe--eccchHHHHHhhhcccceEEE
Confidence            568999986 9999999888878899999999987     333333333211  233  222 33444555567899888


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +.+
T Consensus        98 ~~~  100 (168)
T d1piwa2          98 CAS  100 (168)
T ss_dssp             CCS
T ss_pred             Eec
Confidence            866

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.90  E-value=7.6e-05  Score=44.90  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=30.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|.+.| .|..|.++++.|++.|++|.+.+|++
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECch
Confidence            6799998 59999999999999999999999986

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.86  E-value=4.8e-05  Score=46.32  Aligned_cols=71  Identities=15%  Similarity=0.222  Sum_probs=49.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+++++|.|+ |+.+++++..|.+.+.+|+++.|+.    +...+..+.+.. .++.....|-.       ...++|.+|
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~----~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiI   84 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF----SKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVI   84 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH----HHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchH----HHHHHHHHHHhhccccchhhhccc-------cccccceee
Confidence            3678999985 8899999999998889999999997    333333333332 23445544422       235689999


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      |+.+
T Consensus        85 N~tp   88 (171)
T d1p77a1          85 NATS   88 (171)
T ss_dssp             ECCC
T ss_pred             eccc
Confidence            9875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=0.00046  Score=41.52  Aligned_cols=74  Identities=24%  Similarity=0.310  Sum_probs=51.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccCChHHHHHHhc-----c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFADHRSLVEAVK-----R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~-----~   75 (124)
                      +.+++|.|+ |.+|...++.+...|. +|+++++++     .+.+..+.+   +. .++..+-.++....+.++     +
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~-----~rl~~a~~~---Ga~~~~~~~~~~~~~~~~~~~~~~g~g   97 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA-----TRLSKAKEI---GADLVLQISKESPQEIARKVEGQLGCK   97 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHT---TCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH-----HHHHHHHHh---CCcccccccccccccccccccccCCCC
Confidence            457899986 9999999999988897 799999886     444444332   33 344444455555554442     5


Q ss_pred             cCEEEEeCcc
Q 033236           76 VDVVICTISG   85 (124)
Q Consensus        76 ~d~vi~~a~~   85 (124)
                      +|++|.+.|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            8999999983

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.81  E-value=1.8e-05  Score=48.65  Aligned_cols=34  Identities=21%  Similarity=0.318  Sum_probs=27.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~   36 (124)
                      |+++.|.||+|++|+.+++.|.+.. .++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            3689999999999999999998875 566655433

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.80  E-value=0.00011  Score=44.46  Aligned_cols=73  Identities=21%  Similarity=0.428  Sum_probs=57.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .-+++|.|+ |-.|..-++...+.|.+|++++.+.     .+.+.++......++..   ..+++.+.+.++++|+||.+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~-----~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV-----ERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcH-----HHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence            357999996 9999999999999999999999987     44444444434444444   45688899999999999998


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      +-
T Consensus       103 al  104 (168)
T d1pjca1         103 VL  104 (168)
T ss_dssp             CC
T ss_pred             ee
Confidence            74

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.76  E-value=1.1e-05  Score=48.49  Aligned_cols=108  Identities=18%  Similarity=0.071  Sum_probs=62.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-----C--eEEEEeCCCCCCchHHHHHhhh-h---ccCCeEEEEcccCChHHHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-----H--ETYVLQRPDIGLDIDKLQMLLS-F---KKQGAHLIEASFADHRSLV   70 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-----~--~v~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~~~~D~~~~~~~~   70 (124)
                      +.+|+.|+||+|.+|++++..|++.+     .  .+..++.+..   ....+.+.. .   .......+..    ..+..
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~---~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~   74 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLLKDVIA----TDKEE   74 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTEEEEEE----ESCHH
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc---hhhhhhhhhhhccccccccccccc----Ccccc
Confidence            46799999999999999999998654     1  3344444331   122111111 0   1112222221    12245


Q ss_pred             HHhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236           71 EAVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVK-KRKLNE  116 (124)
Q Consensus        71 ~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s  116 (124)
                      +.++++|+||..+|..+        ....|..-.+.+.+.+.+..+-. .++.+|
T Consensus        75 ~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          75 IAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             HHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            67888999999998432        23456677778888887753122 344444

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.74  E-value=5.2e-05  Score=45.23  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=30.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.+.| +|.+|+++++.|.+.|+++++..|++
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSL   33 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChH
Confidence            6789998 59999999999999999999999886

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.73  E-value=0.00025  Score=43.03  Aligned_cols=34  Identities=26%  Similarity=0.366  Sum_probs=31.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .|+|-|.| .|..|..+++.|++.|++|.+.+|++
T Consensus         1 ~MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~   34 (178)
T d1pgja2           1 SMDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTY   34 (178)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCH
Confidence            36899998 59999999999999999999999987

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.70  E-value=0.00017  Score=43.41  Aligned_cols=33  Identities=27%  Similarity=0.509  Sum_probs=28.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~   37 (124)
                      |++.|.| .|.+|..+++.|.+.|+  +|++.++++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            5799998 59999999999999985  778888876

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.69  E-value=5.8e-05  Score=46.45  Aligned_cols=33  Identities=24%  Similarity=0.473  Sum_probs=27.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEe
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQ   34 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~   34 (124)
                      ++.++.|.||+|++|+.+++.|.+.. .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            34579999999999999999999876 5665554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=9.1e-05  Score=45.56  Aligned_cols=73  Identities=19%  Similarity=0.198  Sum_probs=44.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEE-EeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHh-cccCE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAV-KRVDV   78 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~   78 (124)
                      .+++|+||+|++|...++.....|.++++ +++++    +........   .+.. ...|..++   +.++++. +++|+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~----e~~~~l~~~---~gad-~vi~~~~~~~~~~~~~~~~~GvDv  103 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ----EKCLFLTSE---LGFD-AAVNYKTGNVAEQLREACPGGVDV  103 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSH----HHHHHHHHH---SCCS-EEEETTSSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchH----HHHhhhhhc---ccce-EEeeccchhHHHHHHHHhccCceE
Confidence            57999999999999999998888976544 45554    222222222   1211 22244433   3333333 25999


Q ss_pred             EEEeCc
Q 033236           79 VICTIS   84 (124)
Q Consensus        79 vi~~a~   84 (124)
                      ++.+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            999987

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.68  E-value=5.5e-05  Score=45.31  Aligned_cols=25  Identities=32%  Similarity=0.430  Sum_probs=22.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH   28 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~   28 (124)
                      -+|.|.||+|++|..+++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4799999999999999999988854

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.64  E-value=0.00022  Score=43.41  Aligned_cols=75  Identities=12%  Similarity=0.199  Sum_probs=48.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH----HHHHhc--c
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS----LVEAVK--R   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~--~   75 (124)
                      +.+++|+|+ |.+|...++.+...|. +|+++++++     .+.+....+..  -.++.-.-.+..+    +.+...  +
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~-----~~~~~a~~lGa--~~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP-----NRLKLAEEIGA--DLTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH-----HHHHHHHHTTC--SEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CCEEEEECC-Cccchhheeccccccccccccccccc-----ccccccccccc--eEEEeccccchHHHHHHHHHhhCCCC
Confidence            468999996 9999999999988996 899999986     44444443321  1233222222222    233332  4


Q ss_pred             cCEEEEeCcc
Q 033236           76 VDVVICTISG   85 (124)
Q Consensus        76 ~d~vi~~a~~   85 (124)
                      +|+||.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            8999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.61  E-value=4.5e-05  Score=46.24  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~   37 (124)
                      +++++|.|+ |+.+++++..|.+.|. +|.++.|+.
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence            568999996 9999999999999994 899999987

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.61  E-value=8.7e-06  Score=49.60  Aligned_cols=34  Identities=26%  Similarity=0.292  Sum_probs=31.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++|+||+|++|...++.....|++|+.+++++
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~   58 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR   58 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCH
Confidence            4699999999999999998888999999999987

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.59  E-value=8.7e-05  Score=45.62  Aligned_cols=35  Identities=34%  Similarity=0.366  Sum_probs=31.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++.|.|. |.||+.+++.+..-|.+|++.+|++
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            4789999995 9999999999999999999999876

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.54  E-value=6.7e-05  Score=45.31  Aligned_cols=76  Identities=22%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHh--cccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAV--KRVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~   78 (124)
                      +.+++|+|++|.+|...++.+...| .+|++.++++     .+.+..+.+...  .++..+-.|. +.+.+..  .++|+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~-----~~~~~~~~~Ga~--~~i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE-----EAVEAAKRAGAD--YVINASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH-----HHHHHHHHHTCS--EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccch-----hhHHHHHHcCCc--eeeccCCcCHHHHHHHHhhcccchh
Confidence            4579999999999999999888888 5888888886     444444443211  3333332222 2333332  24899


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      ++.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.0007  Score=39.14  Aligned_cols=68  Identities=24%  Similarity=0.325  Sum_probs=47.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   77 (124)
                      |++.|.|++|..|+.+.+.+.++++++... +++.          .+.+...   =+..|++.|+.+.+.++     +..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~----------~~~~~~~---DVvIDFS~p~~~~~~l~~~~~~~~p   67 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG----------VEELDSP---DVVIDFSSPEALPKTVDLCKKYRAG   67 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE----------EEECSCC---SEEEECSCGGGHHHHHHHHHHHTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc----------HHHhccC---CEEEEecCHHHHHHHHHHHHhcCCC
Confidence            679999999999999999888899888654 4332          0111111   24668899987777664     356


Q ss_pred             EEEEeCc
Q 033236           78 VVICTIS   84 (124)
Q Consensus        78 ~vi~~a~   84 (124)
                      +|+-..|
T Consensus        68 ~ViGTTG   74 (128)
T d1vm6a3          68 LVLGTTA   74 (128)
T ss_dssp             EEECCCS
T ss_pred             EEEEcCC
Confidence            6666555

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.51  E-value=9.7e-05  Score=43.91  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=29.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      |++.+.|+ |.+|.++++.|++.| ++|.+.+|++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGA   34 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCCh
Confidence            67999985 999999999998887 9999999987

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.49  E-value=9.3e-05  Score=45.55  Aligned_cols=35  Identities=14%  Similarity=0.224  Sum_probs=29.8

Q ss_pred             CceEEE-EccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLV-VGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili-~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+++| .||+|.+|...++.....|.+|++++|++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~   64 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR   64 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecc
Confidence            356676 58899999999998888899999999876

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=97.49  E-value=0.00044  Score=41.75  Aligned_cols=36  Identities=28%  Similarity=0.392  Sum_probs=28.5

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~   37 (124)
                      |+++++.|.| +|.+|+..++.+.+. +.+++++ +|++
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~   38 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRA   38 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSS
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence            7788999998 599999999999875 5777665 4443

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.48  E-value=0.00015  Score=44.72  Aligned_cols=32  Identities=22%  Similarity=0.348  Sum_probs=27.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.| .|++|..++..+ .+|++|++++.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            6799998 699999998755 5799999999886

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=97.47  E-value=0.00046  Score=39.45  Aligned_cols=57  Identities=21%  Similarity=0.299  Sum_probs=41.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC----CchHHHHHhh-hhccCCeEEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG----LDIDKLQMLL-SFKKQGAHLIE   60 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~-~~~~~~~~~~~   60 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.+.++-    .++...+... .+...+++++.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~~   91 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF   91 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHHHCCcEEEe
Confidence            578999986 999999999999999999999988743    2223223222 33456677654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.46  E-value=0.0004  Score=39.30  Aligned_cols=35  Identities=29%  Similarity=0.506  Sum_probs=31.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            468999996 99999999999999999999998873

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=0.0022  Score=40.75  Aligned_cols=96  Identities=18%  Similarity=0.185  Sum_probs=59.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhccCCeEEEEccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFKKQGAHLIEASF   63 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~~D~   63 (124)
                      +.+|+|.| .|++|.+++..|++.| -++++++.+.-+                  ......+.+... .+.+++...+.
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~-np~~~i~~~~~  107 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI-NPHIAITPVNA  107 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECS
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHh-hcccchhhhhh
Confidence            35899999 5999999999999999 478888755210                  111112222222 23444333332


Q ss_pred             -CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           64 -ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        64 -~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                       -+.+......+..|+++.+..       +...-..+-+.|.+.+
T Consensus       108 ~~~~~~~~~~~~~~divid~~d-------~~~~~~~in~~~~~~~  145 (247)
T d1jw9b_         108 LLDDAELAALIAEHDLVLDCTD-------NVAVRNQLNAGCFAAK  145 (247)
T ss_dssp             CCCHHHHHHHHHTSSEEEECCS-------SHHHHHHHHHHHHHHT
T ss_pred             hhhhccccccccccceeeeccc-------hhhhhhhHHHHHHHhC
Confidence             245566677788999988764       3444455667777777

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.41  E-value=0.00059  Score=39.02  Aligned_cols=35  Identities=31%  Similarity=0.489  Sum_probs=31.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.+.++
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            468999986 99999999999999999999988763

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.40  E-value=0.00046  Score=37.42  Aligned_cols=69  Identities=20%  Similarity=0.282  Sum_probs=46.8

Q ss_pred             CceEEEEccCChhcH-HHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIGR-RIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~-~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .|++.+.|- |++|. .+++.|.++|+.|...++.+    ....+.   ++..++.+..+.  +++.+    +++|.||.
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~----~~~t~~---L~~~Gi~i~~gh--~~~~i----~~~d~vV~   66 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEE----TERTAY---LRKLGIPIFVPH--SADNW----YDPDLVIK   66 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSC----CHHHHH---HHHTTCCEESSC--CTTSC----CCCSEEEE
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCC----ChhHHH---HHHCCCeEEeee--ccccc----CCCCEEEE
Confidence            378899986 66676 67888899999999999876    222333   334566665442  23322    56899988


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      ..+.
T Consensus        67 SsAI   70 (89)
T d1j6ua1          67 TPAV   70 (89)
T ss_dssp             CTTC
T ss_pred             ecCc
Confidence            7764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.35  E-value=0.00047  Score=39.41  Aligned_cols=34  Identities=21%  Similarity=0.379  Sum_probs=31.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            468999996 9999999999999999999999876

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.34  E-value=0.00058  Score=40.28  Aligned_cols=35  Identities=17%  Similarity=0.428  Sum_probs=31.2

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      +++++++|+|| |.+|..-++.|++.|.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999997 999999999999999999999654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.33  E-value=0.00055  Score=39.13  Aligned_cols=34  Identities=26%  Similarity=0.328  Sum_probs=30.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.|++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            357999996 9999999999999999999998874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.33  E-value=0.00035  Score=42.26  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=46.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc--ccCC-hHHHHHHh--ccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA--SFAD-HRSLVEAV--KRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~~-~~~~~~~~--~~~   76 (124)
                      +.+++|.|+ |++|...+..+...| .+|+++++++     .+.+....   .+.....-  |..+ .+...+..  .++
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~-----~k~~~a~~---~Ga~~~i~~~~~~~~~~~~~~~~~~~G~   99 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK-----DKFAKAKE---VGATECVNPQDYKKPIQEVLTEMSNGGV   99 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG-----GGHHHHHH---TTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH-----HHHHHHHH---hCCeeEEecCCchhHHHHHHHHHhcCCC
Confidence            468999998 778999999998887 6888888887     33343333   22222221  2211 12222222  259


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999884

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=97.33  E-value=0.00068  Score=38.52  Aligned_cols=35  Identities=31%  Similarity=0.358  Sum_probs=31.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.++++
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            468999996 99999999999999999999998863

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.31  E-value=0.00033  Score=42.96  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=50.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEE-------E------------cccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLI-------E------------ASFA   64 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~------------~D~~   64 (124)
                      -+++|.|+ |-.|..-++.....|.+|.+++.++     .+.+.++.+....++..       +            .--.
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~-----~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~  103 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA-----ATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKK  103 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS-----TTHHHHHHTTCEECCC-----------------------CC
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHH
Confidence            37999996 9999999999999999999999987     33333333222111100       0            0012


Q ss_pred             ChHHHHHHhcccCEEEEeCc
Q 033236           65 DHRSLVEAVKRVDVVICTIS   84 (124)
Q Consensus        65 ~~~~~~~~~~~~d~vi~~a~   84 (124)
                      +.+.+.+.+.++|.||..+-
T Consensus       104 ~~~~l~~~l~~aDlVI~tal  123 (183)
T d1l7da1         104 QAEAVLKELVKTDIAITTAL  123 (183)
T ss_dssp             HHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHHHHhhhhheeeee
Confidence            34567777888999999774

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.31  E-value=0.00033  Score=42.54  Aligned_cols=77  Identities=17%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEccc--CChHHHHHHhcccCE
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASF--ADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~--~~~~~~~~~~~~~d~   78 (124)
                      .+|+++|.|.+.-+|+.++..|+++|..|+....+...    .   ........+ .....|+  ..++.+++....+|+
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ----K---FTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE----E---EESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc----c---cccccceeeeeeccccccccchhHHhhccccCCE
Confidence            47899999999999999999999999998766544200    0   000000000 1112222  346778888888999


Q ss_pred             EEEeCcc
Q 033236           79 VICTISG   85 (124)
Q Consensus        79 vi~~a~~   85 (124)
                      +|..+|.
T Consensus       101 vIsavG~  107 (171)
T d1edza1         101 VITGVPS  107 (171)
T ss_dssp             EEECCCC
T ss_pred             EEEccCC
Confidence            9988874

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=97.30  E-value=0.00054  Score=38.89  Aligned_cols=34  Identities=26%  Similarity=0.591  Sum_probs=31.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            468999996 9999999999999999999999876

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.28  E-value=0.0023  Score=34.99  Aligned_cols=69  Identities=19%  Similarity=0.178  Sum_probs=46.8

Q ss_pred             CceEEEEccCChhc-HHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGTGYIG-RRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~g~iG-~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      .+++.+.|- |++| +++|+.|.++|+.|...++..+    ...+.+   ...++.+..++-  ++.    +++.|.||.
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~----~~~~~L---~~~Gi~v~~g~~--~~~----i~~~d~vV~   73 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADG----VVTQRL---AQAGAKIYIGHA--EEH----IEGASVVVV   73 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCS----HHHHHH---HHTTCEEEESCC--GGG----GTTCSEEEE
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCC----hhhhHH---HHCCCeEEECCc--ccc----CCCCCEEEE
Confidence            467999985 6677 6668889999999999998752    222322   235666665543  332    356898888


Q ss_pred             eCcc
Q 033236           82 TISG   85 (124)
Q Consensus        82 ~a~~   85 (124)
                      ..+.
T Consensus        74 S~AI   77 (96)
T d1p3da1          74 SSAI   77 (96)
T ss_dssp             CTTS
T ss_pred             CCCc
Confidence            7763

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.27  E-value=1.4e-05  Score=49.02  Aligned_cols=34  Identities=12%  Similarity=0.220  Sum_probs=29.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++|.|+ |+.+++++..|.+.| +|+++.|+.
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhh
Confidence            4688999995 899999999998777 899999987

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00061  Score=39.05  Aligned_cols=35  Identities=29%  Similarity=0.464  Sum_probs=31.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.|+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            468999996 99999999999999999999999863

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.27  E-value=0.001  Score=38.45  Aligned_cols=35  Identities=14%  Similarity=0.262  Sum_probs=28.5

Q ss_pred             CceEEEEccC---ChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            3 KSKVLVVGGT---GYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~---g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      .++|.|.|++   +..|..+.+.|.+.| .+|+.+..+.
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~   46 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE   46 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence            4789999998   888999999987766 6888876553

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.27  E-value=0.00088  Score=39.96  Aligned_cols=34  Identities=24%  Similarity=0.228  Sum_probs=29.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+++|.|+ |.+|...++.+...|.+|+++++++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~   61 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD   61 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchh
Confidence            567899885 9999999988888899999999886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00044  Score=39.12  Aligned_cols=35  Identities=31%  Similarity=0.435  Sum_probs=31.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.++
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            367999986 99999999999999999999998863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.26  E-value=0.00061  Score=41.28  Aligned_cols=73  Identities=16%  Similarity=0.227  Sum_probs=49.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   76 (124)
                      +.+++|.|+ |.+|...++.+...|. +|+++++++     .+.+..+.+..  ..++  |..+.   +.+.+..+  ++
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~-----~r~~~a~~lGa--~~~i--~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP-----ICVEAAKFYGA--TDIL--NYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH-----HHHHHHHHHTC--SEEE--CGGGSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccchh-----hhHHHHHhhCc--cccc--cccchhHHHHHHHHhhccCc
Confidence            467999985 9999999998888895 788888876     44454444321  1233  33333   44445443  48


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=97.25  E-value=0.0011  Score=38.17  Aligned_cols=90  Identities=18%  Similarity=0.144  Sum_probs=57.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~   81 (124)
                      .+++|.|| |..|+.+++++.. .+++++++..+...        .....-.++.+..     .+.+.++.+ .++.++.
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~--------k~G~~I~Gi~V~~-----~~~l~~~~~~~i~iai~   69 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPE--------KVGRPVRGGVIEH-----VDLLPQRVPGRIEIALL   69 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTT--------TTTCEETTEEEEE-----GGGHHHHSTTTCCEEEE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchH--------hcCCEECCEEEec-----HHHHHHHHhhcccEEEE
Confidence            36899996 9999999998754 46888887554411        1011123455542     345666554 4676666


Q ss_pred             eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +.+        ......+++.|.+.| ++.+.-.+
T Consensus        70 ~i~--------~~~~~~I~d~l~~~g-Ik~I~~f~   95 (126)
T d2dt5a2          70 TVP--------REAAQKAADLLVAAG-IKGILNFA   95 (126)
T ss_dssp             CSC--------HHHHHHHHHHHHHHT-CCEEEECS
T ss_pred             eCC--------HHHHHHHHHHHHHcC-CCEEeecC
Confidence            654        234567899999999 88776544

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00025  Score=42.73  Aligned_cols=34  Identities=29%  Similarity=0.537  Sum_probs=27.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~   36 (124)
                      .+++.|.|++|..|+.+++.+.+. +.++... +|.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~   39 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   39 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence            578999999999999999998875 5676544 443

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.20  E-value=0.0016  Score=38.04  Aligned_cols=34  Identities=21%  Similarity=0.313  Sum_probs=29.2

Q ss_pred             CceEEEEccC---ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            3 KSKVLVVGGT---GYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~---g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .+++.|.|++   +..|..+++.|.+.|++|+.+...
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            4679999988   789999999999999998877544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.18  E-value=0.00035  Score=43.95  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=30.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|.|| |-.|...+..|.++|++|+++.|.+
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            357999996 9999999999999999999999864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.18  E-value=0.00081  Score=38.30  Aligned_cols=34  Identities=21%  Similarity=0.552  Sum_probs=30.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      ++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            57899986 99999999999999999999998864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=97.16  E-value=0.00013  Score=45.31  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=31.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++.|.| .|.||+.+++.+..-|++|...++..
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            367899998 59999999999999999999998875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.13  E-value=0.0029  Score=38.02  Aligned_cols=73  Identities=15%  Similarity=0.257  Sum_probs=46.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeE-EEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhc-ccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHET-YVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVK-RVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~-~~d   77 (124)
                      +.+++|.|+ |.+|...++.+...|.++ ++.++++     .+.+..+.+..  .+++  |..+++   .++++.. ++|
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~-----~k~~~a~~~Ga--~~~i--~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE-----SRLELAKQLGA--THVI--NSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH-----HHHHHHHHHTC--SEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH-----HHHHHHHHcCC--eEEE--eCCCcCHHHHHHHHcCCCCc
Confidence            457999986 999999998888888655 5555554     55555544332  2344  333433   3333333 489


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999983

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=97.12  E-value=0.00045  Score=39.51  Aligned_cols=35  Identities=29%  Similarity=0.403  Sum_probs=31.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +++++|.|| |++|..++..|.+.|.+|+++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            467899986 99999999999999999999998873

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.10  E-value=0.0022  Score=36.31  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=28.0

Q ss_pred             ceEEEEccC---ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            4 SKVLVVGGT---GYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         4 ~~ili~Ga~---g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      |++.|.|++   +..|..+++.|.+.|++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            678999987   678999999999999998877543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.001  Score=39.99  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=32.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+++|.| .|.+|+.+++.+...|.+|++...+|
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeeccc
Confidence            478999998 69999999999999999999999987

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.07  E-value=0.0015  Score=39.50  Aligned_cols=75  Identities=15%  Similarity=0.210  Sum_probs=49.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEE-cccCC-hHHHHHHh--cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE-ASFAD-HRSLVEAV--KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~-~~~~~~~~--~~~d   77 (124)
                      +.+++|+|+ |++|...++.+...| .+|+++++++     .+.+....+...  .++. -|-.+ .+.+.+..  .++|
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~-----~kl~~Ak~~GA~--~~in~~~~~~~~~~~~~~~~g~G~d  101 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK-----DKFEKAMAVGAT--ECISPKDSTKPISEVLSEMTGNNVG  101 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG-----GGHHHHHHHTCS--EEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcH-----HHHHHHHhcCCc--EEECccccchHHHHHHHHhccccce
Confidence            457999985 999999999999998 6899999987     444444443221  2332 12221 23344444  3599


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      +++.+.|.
T Consensus       102 ~vi~~~g~  109 (176)
T d1d1ta2         102 YTFEVIGH  109 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCc
Confidence            99999884

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.07  E-value=0.0019  Score=38.34  Aligned_cols=72  Identities=24%  Similarity=0.261  Sum_probs=44.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC---hHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD---HRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~d~v   79 (124)
                      +.+++|.|+ |.+|...++.+...|.+|+++++++     .+.+..+.   .+...+. |..+   .+.+.....+.+.+
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~-----~r~~~~k~---~Ga~~~~-~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD-----EKLELAKE---LGADLVV-NPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHH---TTCSEEE-CTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH-----HHhhhhhh---cCcceec-ccccchhhhhcccccCCCceE
Confidence            457888875 9999999888888999999998876     33333333   2333222 2222   23344444555555


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            55554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.06  E-value=0.00093  Score=41.55  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=31.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++.|-| .|.+|+++++.|.+.|.+|++.+.++
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchH
Confidence            468899998 69999999999999999999888765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.05  E-value=0.00062  Score=42.24  Aligned_cols=34  Identities=26%  Similarity=0.258  Sum_probs=30.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|.| .|.||+.+++.+..-|++|++.++..
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCeEEEec-ccccchhHHHhHhhhcccccccCccc
Confidence            67899998 59999999999998999999988765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.02  E-value=0.0092  Score=35.20  Aligned_cols=36  Identities=22%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~   37 (124)
                      ++|++.|.|+||.||...++-+.+.  .++|.+++-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            3588999999999999999888765  47887775443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.01  E-value=0.0027  Score=38.03  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=46.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      +.+++|.|+ |.+|...++.+...| ..|++.++++     .+.+....+.  ..+++..+-.+.+...+...  ++|++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~-----~k~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE-----EKLKLAERLG--ADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH-----HHHHHHHHTT--CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchh-----HHHHHHhhcc--cceeecCcccHHHHHHHhhCCCCceEE
Confidence            457888885 999999988887777 5667777775     4444444322  22344333222333444333  48999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999984

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0007  Score=46.76  Aligned_cols=79  Identities=18%  Similarity=0.245  Sum_probs=52.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D   62 (124)
                      +.+|+|.|+ |++|..+++.|+..|. ++++++.+.-+                  ......+.+..+. .-++..+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            357999996 8899999999999995 88888765311                  1111122232222 2346666666


Q ss_pred             cCChHHHHHHhcccCEEEEeCc
Q 033236           63 FADHRSLVEAVKRVDVVICTIS   84 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~   84 (124)
                      +.+..  ...+++.|+|+.+..
T Consensus       116 i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECCS
T ss_pred             ccchH--HHHHHhcchheeccC
Confidence            65433  467889999998765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.98  E-value=0.00023  Score=43.84  Aligned_cols=34  Identities=18%  Similarity=0.131  Sum_probs=30.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|.| .|.||+.+++.+..-|.+|...++..
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            57889998 59999999999999999999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.95  E-value=0.00053  Score=38.67  Aligned_cols=35  Identities=31%  Similarity=0.496  Sum_probs=31.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +++++|.|| |++|..++..|.+.|++|+++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            468899985 99999999999999999999998763

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.94  E-value=0.0002  Score=44.28  Aligned_cols=34  Identities=15%  Similarity=0.190  Sum_probs=30.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|.|. |.||+.+++.+..-|.+|...++..
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccc
Confidence            678999984 9999999999999999999988765

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.93  E-value=0.0025  Score=38.18  Aligned_cols=74  Identities=19%  Similarity=0.200  Sum_probs=44.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh-----ccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV-----KRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~   76 (124)
                      +.+++|.|+ |++|...++.+...|. .|+++++++     .+.+....+...  .++..+ .+.+.+.+..     .++
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~-----~k~~~ak~lGa~--~~i~~~-~~~~~~~~~~~~~~~~g~   99 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK-----DKFARAKEFGAT--ECINPQ-DFSKPIQEVLIEMTDGGV   99 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG-----GGHHHHHHHTCS--EEECGG-GCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccH-----HHHHHHHHhCCc--EEEeCC-chhhHHHHHHHHHcCCCC
Confidence            467899987 7899999998888885 566666655     444444443322  233221 1122222222     358


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |+++.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999884

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.91  E-value=0.004  Score=37.52  Aligned_cols=104  Identities=13%  Similarity=0.065  Sum_probs=59.8

Q ss_pred             CceEEEEccCChhcHH--HHHHHhhC----CCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc
Q 033236            3 KSKVLVVGGTGYIGRR--IVKASLAQ----GHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~--l~~~l~~~----g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      .||+.|.|| |.+|..  ++..++..    +.++.+++.++...+..........  ......+..     ..+..++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhccc
Confidence            589999996 888864  33444432    3599999998622111111111111  122233222     234667889


Q ss_pred             ccCEEEEeCccccc----------------------------------eecchHHHHHHHHHHHHhCCccEEE
Q 033236           75 RVDVVICTISGVHF----------------------------------RSHNILMQLKLVDAIREAGNVKKRK  113 (124)
Q Consensus        75 ~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i  113 (124)
                      ++|+|++.++...+                                  ...|..-.+.+++.+.+.. .+.++
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~-p~a~~  147 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWY  147 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC-cCeEE
Confidence            99999998764321                                  0125666778888888887 34443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.88  E-value=0.0017  Score=37.20  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            468999996 9999999999999999999998876

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0019  Score=39.54  Aligned_cols=35  Identities=20%  Similarity=0.292  Sum_probs=30.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++.|.| .|.||+.+++.+..-|++|...++..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            357899998 59999999999999999999998765

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.84  E-value=0.003  Score=35.56  Aligned_cols=35  Identities=31%  Similarity=0.273  Sum_probs=31.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +++++|.|+ |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            478999985 99999999999999999999998763

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.83  E-value=0.0011  Score=38.41  Aligned_cols=35  Identities=23%  Similarity=0.562  Sum_probs=31.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            578999985 99999999999999999999998864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.0021  Score=39.22  Aligned_cols=35  Identities=26%  Similarity=0.161  Sum_probs=30.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++.|.| .|.||+.+++.+..-|++|...++..
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            357888888 59999999999998999999998775

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.74  E-value=0.002  Score=39.84  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|.| .|.||+.+++.+..-|++|++.++.+
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            57899998 59999999999999999999998876

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0036  Score=37.63  Aligned_cols=36  Identities=25%  Similarity=0.309  Sum_probs=31.5

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+++|.|.+.-+|+.++..|.++|+.|++.....
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            578999999999999999999999999998765543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.69  E-value=0.0052  Score=37.71  Aligned_cols=73  Identities=19%  Similarity=0.205  Sum_probs=47.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   76 (124)
                      +.+++|+|+ |.+|...+..+...| .+|+++++++     .+.+....   .+...+. |..+.   +.+.++..  ++
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~-----~rl~~a~~---~Ga~~~~-~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP-----ARLAHAKA---QGFEIAD-LSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHH---TTCEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc-----hhhHhhhh---ccccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence            568999985 999988877776667 5788888876     44444433   3444432 33333   34444443  48


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|.+.|.
T Consensus        96 D~vid~vG~  104 (195)
T d1kola2          96 DCAVDAVGF  104 (195)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEECccc
Confidence            999999874

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.68  E-value=0.0014  Score=43.24  Aligned_cols=35  Identities=29%  Similarity=0.596  Sum_probs=31.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|+++|.|| |.-|...|..|.+.|++|.++.+++
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3688999995 9999999999999999999999876

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.67  E-value=0.0075  Score=36.18  Aligned_cols=109  Identities=15%  Similarity=0.153  Sum_probs=57.2

Q ss_pred             CceEEEEccC-ChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcc
Q 033236            3 KSKVLVVGGT-GYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         3 ~~~ili~Ga~-g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      ++|+.|.||. .+.+..++..+....    -++.+++.++.....+..+...  .....+...-....+   +..+++++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~t---d~~~al~g   77 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTL---DRRRALDG   77 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEES---CHHHHHTT
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecC---CchhhcCC
Confidence            4789999972 233445544444321    4788888775221111112111  111122222222222   34567889


Q ss_pred             cCEEEEeCccccce----------------------------ecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           76 VDVVICTISGVHFR----------------------------SHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        76 ~d~vi~~a~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +|+|++.++.....                            ..|+.-.+.+++.+.+.. ...++++
T Consensus        78 aDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~  144 (169)
T d1s6ya1          78 ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN  144 (169)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             CCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEE
Confidence            99999999854210                            124555677888888877 4544443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0062  Score=36.71  Aligned_cols=36  Identities=14%  Similarity=0.162  Sum_probs=32.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+++|.|.+.-+|+.++..|.++|..|+......
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            578999999999999999999999999998876654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.65  E-value=0.019  Score=33.20  Aligned_cols=71  Identities=18%  Similarity=0.240  Sum_probs=45.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVD   77 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   77 (124)
                      |+.|.|++|..|+.+++.+.+. ++++... ++.. ...        .....+. =+..|++.|+.+.+.++     ++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~--------~~~~~~~-DvvIDFS~p~~~~~~~~~~~~~~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS--------LLTDGNT-EVVIDFTHPDVVMGNLEFLIDNGIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH--------HHHTTTC-SEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh--------hhccccC-CEEEEcccHHHHHHHHHHHHhcCCC
Confidence            6899999999999999998765 5777654 4432 110        1111222 25678888876666553     466


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      .|+-..|.
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77665553

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.65  E-value=0.0029  Score=38.46  Aligned_cols=100  Identities=15%  Similarity=0.181  Sum_probs=54.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccC------CeE-EEEcccCChHHHHHHhcc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ------GAH-LIEASFADHRSLVEAVKR   75 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~------~~~-~~~~D~~~~~~~~~~~~~   75 (124)
                      -++.|-| .|.||+.+++.+.+++ .+++.+....+.  ......... ...      ... +-...+.....+..+.++
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~   77 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPN--YEAFIAHRR-GIRIYVPQQSIKKFEESGIPVAGTVEDLIKT   77 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCS--HHHHHHHHT-TCCEECCGGGHHHHHTTTCCCCCCHHHHHHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCc--HHHHHhccc-CcceeccCccceeccccceecCCchhhhhhc
Confidence            4788998 6999999999999865 677776433211  111111111 000      000 000011112234555667


Q ss_pred             cCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           76 VDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        76 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      +|+|+-|.|..        ...+-++...+.|  +++|++++
T Consensus        78 vDiViecTG~f--------~~~e~a~~hl~~G--~KvIi~~~  109 (178)
T d1b7go1          78 SDIVVDTTPNG--------VGAQYKPIYLQLQ--RNAIFQGG  109 (178)
T ss_dssp             CSEEEECCSTT--------HHHHHHHHHHHTT--CEEEECTT
T ss_pred             CCEEEECCCCc--------CCHHHHHHHHHcC--CEEEEECC
Confidence            99999999842        2334455556677  46666653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.64  E-value=0.0067  Score=36.50  Aligned_cols=75  Identities=13%  Similarity=0.184  Sum_probs=47.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHh--cccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAV--KRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~--~~~d   77 (124)
                      +.+++|+| +|.+|...++.+...|. +|++.++++     .+.+..+.+..  ..++...-.+  .+.+.+..  .++|
T Consensus        29 G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~-----~r~~~a~~~Ga--~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          29 GSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING-----EKFPKAKALGA--TDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG-----GGHHHHHHTTC--SEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccch-----HHHHHHHHhCC--CcccCCccchhhhhhhHhhhhcCCCc
Confidence            46899998 59999999999999996 677777776     44444433221  1233222212  22233322  3599


Q ss_pred             EEEEeCcc
Q 033236           78 VVICTISG   85 (124)
Q Consensus        78 ~vi~~a~~   85 (124)
                      ++|.+.|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999983

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.63  E-value=0.0051  Score=36.98  Aligned_cols=74  Identities=19%  Similarity=0.167  Sum_probs=46.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCC--hHHHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFAD--HRSLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~--~~~~~~~~~--~~   76 (124)
                      +.+++|.|+ |.+|...++.+...| .+|+++++++     .+.+..+.   .+.. ++...-.|  .+...+...  +.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~-----~kl~~a~~---lGa~~~i~~~~~d~~~~~~~~~~~~~G~   98 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK-----DKFPKAIE---LGATECLNPKDYDKPIYEVICEKTNGGV   98 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG-----GGHHHHHH---TTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH-----HHHHHHHH---cCCcEEEcCCCchhHHHHHHHHhcCCCC
Confidence            568999985 999999999998888 5788888876     44444433   2322 33221112  122333222  58


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |++|-+.|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999998873

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.62  E-value=0.0013  Score=41.68  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +|+|+|+|| |.-|...+.+|.+.|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            488999996 9999999999999999999998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.62  E-value=0.0013  Score=39.77  Aligned_cols=34  Identities=12%  Similarity=0.251  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~   37 (124)
                      +++|+|.|| |..|...+..|.+.|+ +|+++.|++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            578999996 9999999999999997 599999886

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.60  E-value=0.027  Score=33.79  Aligned_cols=97  Identities=25%  Similarity=0.162  Sum_probs=55.2

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcccC-----------ChHH
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEASFA-----------DHRS   68 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----------~~~~   68 (124)
                      |.+++.|-| -|-||+.+++.+.+++ .+++.+. .++    ......+..   .++..+..+-.           ....
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~----~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP----DFEAYRAKE---LGIPVYAASEEFIPRFEKEGFEVAGT   72 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC----SHHHHHHHH---TTCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC----hHHHHHhhh---cCceeecccccceeeecccCccccch
Confidence            457899998 5999999999998765 6666554 333    111111111   11222222221           1224


Q ss_pred             HHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           69 LVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        69 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +..+.+++|+|+=|.|...        +..-++.-.+.| +++++..
T Consensus        73 ~~~~~~~vDvViEcTG~f~--------~~~~~~~hl~~G-~k~Vi~s  110 (172)
T d2czca2          73 LNDLLEKVDIIVDATPGGI--------GAKNKPLYEKAG-VKAIFQG  110 (172)
T ss_dssp             HHHHHTTCSEEEECCSTTH--------HHHHHHHHHHHT-CEEEECT
T ss_pred             hhhhhccCCEEEECCCCCC--------CHHHHHHHHHcC-CCEEEEC
Confidence            4555667999999999432        334445556778 5544433

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.49  E-value=0.024  Score=33.54  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=40.7

Q ss_pred             CCC-ceEEEEccCChhcHHHH-HHHhhC-CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH--hc
Q 033236            1 MGK-SKVLVVGGTGYIGRRIV-KASLAQ-GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA--VK   74 (124)
Q Consensus         1 m~~-~~ili~Ga~g~iG~~l~-~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~   74 (124)
                      |.. .++.|.| +|++|+.+. +.|.+. ..++.++ +|++.+.   ..+..+   ..++....   .+.+++.+.  ++
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~---~~~~a~---~~~i~~~~---~~~d~l~~~~~~~   70 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASD---GLARAQ---RMGVTTTY---AGVEGLIKLPEFA   70 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCH---HHHHHH---HTTCCEES---SHHHHHHHSGGGG
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhcc---chhhhh---hcCCcccc---cceeeeeeccccc
Confidence            554 4799999 899998654 544433 3567666 5555221   112121   22333322   234555544  34


Q ss_pred             ccCEEEEeCc
Q 033236           75 RVDVVICTIS   84 (124)
Q Consensus        75 ~~d~vi~~a~   84 (124)
                      ++|+|+.+.+
T Consensus        71 ~iDiVf~ATp   80 (157)
T d1nvmb1          71 DIDFVFDATS   80 (157)
T ss_dssp             GEEEEEECSC
T ss_pred             ccCEEEEcCC
Confidence            7999988654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=96.48  E-value=0.0019  Score=41.14  Aligned_cols=32  Identities=25%  Similarity=0.441  Sum_probs=29.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|| |-.|..++.+|+++|.+|+++.+.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899996 9999999999999999999999865

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=96.46  E-value=0.0022  Score=40.37  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=31.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            478999996 9999999999999999999999875

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=96.42  E-value=0.0016  Score=41.24  Aligned_cols=33  Identities=27%  Similarity=0.473  Sum_probs=30.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|+|+|| |.-|...+..|.+.|++|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67999996 9999999999999999999998875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.0032  Score=38.31  Aligned_cols=34  Identities=26%  Similarity=0.428  Sum_probs=31.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .|+++|.|| |..|...+..|.++|++|+++.+++
T Consensus        43 ~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          43 KKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            578999996 9999999999999999999999875

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.014  Score=36.17  Aligned_cols=83  Identities=7%  Similarity=0.093  Sum_probs=52.3

Q ss_pred             CceEEEEccCChhcHHHH-HHH---hhC-----CCeEEEEeCCCCCCchHHHHHhh----------hhc--cCCeEEEEc
Q 033236            3 KSKVLVVGGTGYIGRRIV-KAS---LAQ-----GHETYVLQRPDIGLDIDKLQMLL----------SFK--KQGAHLIEA   61 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~-~~l---~~~-----g~~v~~~~r~~~~~~~~~~~~~~----------~~~--~~~~~~~~~   61 (124)
                      ..+++|+||+|.+.+.-+ ..|   ...     +..|+++.|++.+.+........          .+.  ..++.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            346899999999987654 333   233     35788999987443222111110          111  246788999


Q ss_pred             ccCChHHHHHHhc---------ccCEEEEeCcc
Q 033236           62 SFADHRSLVEAVK---------RVDVVICTISG   85 (124)
Q Consensus        62 D~~~~~~~~~~~~---------~~d~vi~~a~~   85 (124)
                      |+++++++.++-+         +...+++.|-|
T Consensus       100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvp  132 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNALHLGSQANRLFYLALP  132 (203)
T ss_dssp             CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred             cCCChhhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence            9999988777633         24578887754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.35  E-value=0.0072  Score=35.41  Aligned_cols=35  Identities=14%  Similarity=0.378  Sum_probs=28.9

Q ss_pred             ceEEEE-ccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            4 SKVLVV-GGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         4 ~~ili~-Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +.++|. .+.|++|..++..|.+.|.+|+++.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            445555 24599999999999999999999998863

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0034  Score=32.98  Aligned_cols=34  Identities=24%  Similarity=0.350  Sum_probs=30.9

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      |++.|.|+ |.+|+=++.+-.+.|+++++++.++.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            78999995 99999999999999999999998763

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0037  Score=44.17  Aligned_cols=104  Identities=14%  Similarity=0.186  Sum_probs=61.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhcc-CCeEEEEcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFKK-QGAHLIEAS   62 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~~-~~~~~~~~D   62 (124)
                      ..+|+|.|+ |++|..+++.|+..| -.+++++.+.-.                  .+....+.+..+.+ -.++.+..+
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~  103 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES  103 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence            458999985 899999999999999 578888755311                  11111122222221 134455444


Q ss_pred             cCCh-HHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           63 FADH-RSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        63 ~~~~-~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ..+. +.-...+++.|+|+.+..       +......+-+.|.+.+ + .+|...
T Consensus       104 ~~~~~~~~~~~~~~~dvVv~~~~-------~~~~~~~l~~~c~~~~-i-p~i~~~  149 (529)
T d1yova1         104 PENLLDNDPSFFCRFTVVVATQL-------PESTSLRLADVLWNSQ-I-PLLICR  149 (529)
T ss_dssp             HHHHHHSCGGGGGGCSEEEEESC-------CHHHHHHHHHHHHHHT-C-CEEEEE
T ss_pred             chhhhhhHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHcC-C-CEEEEe
Confidence            3221 111245677999998764       3444566788888887 4 455544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.25  E-value=0.012  Score=34.99  Aligned_cols=74  Identities=18%  Similarity=0.224  Sum_probs=45.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccC--ChHHHHHHhc--cc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFA--DHRSLVEAVK--RV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~--~~~~~~~~~~--~~   76 (124)
                      +.+++|.|+ |.+|...+..+...| .+|+++++++     .+.+....   .+. +++..+-.  ..+...+...  ++
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~-----~rl~~a~~---~GAd~~in~~~~~~~~~~~~~~~~~~G~   99 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP-----DKFEKAKV---FGATDFVNPNDHSEPISQVLSKMTNGGV   99 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG-----GGHHHHHH---TTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchH-----HHHHHHHH---cCCcEEEcCCCcchhHHHHHHhhccCCc
Confidence            467999986 777777777777776 6788888876     44444433   222 23322111  1233444332  59


Q ss_pred             CEEEEeCcc
Q 033236           77 DVVICTISG   85 (124)
Q Consensus        77 d~vi~~a~~   85 (124)
                      |+++.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999984

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.21  E-value=0.0021  Score=41.24  Aligned_cols=34  Identities=24%  Similarity=0.399  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+|+|.|| |-.|..++..|.+.|++|.++.+.+
T Consensus         2 k~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           2 KTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             BCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            347999996 8999999999999999999999886

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.014  Score=34.41  Aligned_cols=34  Identities=18%  Similarity=0.244  Sum_probs=27.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~   36 (124)
                      ||++.|.|+||.||...++-+.+.  .++|.+++-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            368999999999999999888775  3788777544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.20  E-value=0.0088  Score=35.73  Aligned_cols=35  Identities=17%  Similarity=0.313  Sum_probs=32.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+++|.|= |.+|+.+++.+...|.+|+++..+|
T Consensus        22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          22 SGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             cCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCc
Confidence            4789999984 9999999999999999999999987

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.19  E-value=0.039  Score=32.51  Aligned_cols=91  Identities=13%  Similarity=0.081  Sum_probs=51.6

Q ss_pred             ceEEEEccCChhcHH-HHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRR-IVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~-l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++.|.| +|.+|+. .++.+.+. +.++.+.++++    .......+.+...   .+   .+|.+++.+  +++|+|+.
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~----~~~~~~~~~~~~~---~~---~~~~~~ll~--~~iD~V~I   68 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNP----KVLGTLATRYRVS---AT---CTDYRDVLQ--YGVDAVMI   68 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCH----HHHHHHHHHTTCC---CC---CSSTTGGGG--GCCSEEEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCH----HHHHHHHHhcccc---cc---cccHHHhcc--cccceecc
Confidence            6889998 4888865 55666555 46776666654    2222222222211   11   123333222  36899888


Q ss_pred             eCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           82 TISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        82 ~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.++..                   ....+......+.+.+.+.+
T Consensus        69 ~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~  113 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH  113 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcC
Confidence            766431                   12346777788888888877

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=96.14  E-value=0.0036  Score=36.96  Aligned_cols=35  Identities=29%  Similarity=0.313  Sum_probs=30.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~   37 (124)
                      .+|+++|.|| |..|..++..|.+.+  .+|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3689999996 999999999999877  5888888775

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=96.12  E-value=0.003  Score=40.68  Aligned_cols=34  Identities=26%  Similarity=0.462  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+|| |-.|...+..|.++|++|+++.+++
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999996 9999999999999999999999875

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=96.07  E-value=0.059  Score=32.18  Aligned_cols=92  Identities=18%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             CCCceEEEEccCChhcHH-HHHHHhhCC--CeEEEEe-CCCCCCchHHHHHh-hhhccCCeEEEEcccCChHHHHHHhc-
Q 033236            1 MGKSKVLVVGGTGYIGRR-IVKASLAQG--HETYVLQ-RPDIGLDIDKLQML-LSFKKQGAHLIEASFADHRSLVEAVK-   74 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~-l~~~l~~~g--~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-   74 (124)
                      |++.++.|.| +|.+|+. .++.+.+.+  .+++++. +++     .+.+.. +.+.   ...+   ..+   ++++++ 
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~-----~~~~~~~~~~~---~~~~---~~~---~~ell~~   65 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTR-----SHAEEFAKMVG---NPAV---FDS---YEELLES   65 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSH-----HHHHHHHHHHS---SCEE---ESC---HHHHHHS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccH-----hhhhhhhcccc---ccce---eee---eeccccc
Confidence            7777899998 5899986 466666543  4777654 443     222222 2221   1111   123   444444 


Q ss_pred             -ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           75 -RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        75 -~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                       ++|+|+.+.++..                   ....+......+.+.+.+.+
T Consensus        66 ~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~  118 (181)
T d1zh8a1          66 GLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSE  118 (181)
T ss_dssp             SCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCS
T ss_pred             cccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhC
Confidence             5898888765431                   12345677777888887776

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.06  E-value=0.042  Score=31.03  Aligned_cols=88  Identities=23%  Similarity=0.290  Sum_probs=58.7

Q ss_pred             CceEEEEccC----------ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH
Q 033236            3 KSKVLVVGGT----------GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga~----------g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      .++++|.|+.          -+.+.+.+++|.+.|++++.+..+|..-+        . ...-..-+-...-..+.+.+.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs--------t-d~d~aD~lYfeplt~e~v~~I   74 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS--------T-DYDTSDRLYFEPVTLEDVLEI   74 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST--------T-STTSSSEEECCCCSHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh--------c-ChhhcCceEEccCCHHHHHHH
Confidence            5789999963          26788899999999999999998883211        0 011122334444567788887


Q ss_pred             hc--ccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           73 VK--RVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        73 ~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ++  ++|.|+-..|.        +...++...+.+.|
T Consensus        75 i~~E~p~~ii~~~GG--------Qtalnla~~L~~~g  103 (121)
T d1a9xa4          75 VRIEKPKGVIVQYGG--------QTPLKLARALEAAG  103 (121)
T ss_dssp             HHHHCCSEEECSSST--------HHHHTTHHHHHHTT
T ss_pred             HHHhCCCEEEeehhh--------hhHHHHHHHHHHcC
Confidence            64  69998887763        23455666666666

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=96.03  E-value=0.052  Score=32.33  Aligned_cols=78  Identities=18%  Similarity=0.162  Sum_probs=42.9

Q ss_pred             CceEEEEccCChhcHH-HHHHHhh-CC----CeEEEEeCCCCCCch--HHHHHhhhhccCCeEEEEcccCChHHHHHHhc
Q 033236            3 KSKVLVVGGTGYIGRR-IVKASLA-QG----HETYVLQRPDIGLDI--DKLQMLLSFKKQGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~-l~~~l~~-~g----~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      ..|+.|.|| |.+|.. ++..++. ..    .++.+++.+++..+.  ...++..............     .+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            457899997 556654 3334433 22    488888888622110  1111111111223333222     24677888


Q ss_pred             ccCEEEEeCccc
Q 033236           75 RVDVVICTISGV   86 (124)
Q Consensus        75 ~~d~vi~~a~~~   86 (124)
                      ++|+||+.+|..
T Consensus        77 ~AD~Vvitag~~   88 (167)
T d1u8xx1          77 DVDFVMAHIRVG   88 (167)
T ss_dssp             SCSEEEECCCTT
T ss_pred             CCCEEEECCCcC
Confidence            999999999864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.00  E-value=0.011  Score=37.43  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=46.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhh-CCCeEEEEeCC------CCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLA-QGHETYVLQRP------DIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      ++++++|-| .|.+|+++++.|.+ .|.+|+.++..      +.+.+...................++..+++   +.++
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~  105 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNE---ELLE  105 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHH---HHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccc---cccc
Confidence            467888887 69999999999975 59999877633      3444444433332221111112222222222   3443


Q ss_pred             -ccCEEEEeCcc
Q 033236           75 -RVDVVICTISG   85 (124)
Q Consensus        75 -~~d~vi~~a~~   85 (124)
                       ++|+++-||-.
T Consensus       106 ~~~DI~~PcA~~  117 (234)
T d1b26a1         106 LDVDILVPAALE  117 (234)
T ss_dssp             SCCSEEEECSCT
T ss_pred             cccceeecchhc
Confidence             68888888753

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.90  E-value=0.021  Score=31.81  Aligned_cols=35  Identities=23%  Similarity=0.392  Sum_probs=27.8

Q ss_pred             CceEEEEccCChhcHHHHHHHh---hCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL---AQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~---~~g~~v~~~~r~~~   38 (124)
                      +++++|.|| |++|..++..|.   .+|.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468999996 999999996654   45678999988763

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.85  E-value=0.0048  Score=40.19  Aligned_cols=33  Identities=15%  Similarity=0.336  Sum_probs=30.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ..++|.|| |..|..+|..|++.|++|.++.+++
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            57899996 9999999999999999999998876

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.80  E-value=0.0074  Score=37.69  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=30.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++++|.|| |..|...+..|.+.|++|+++.+++
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            478999996 9999999999999999999998775

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.71  E-value=0.088  Score=31.41  Aligned_cols=96  Identities=21%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcc-----------cCChHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEAS-----------FADHRSLV   70 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------~~~~~~~~   70 (124)
                      +++.|-| -|-||+.+++.+.+++ .+++.+. +++.    .....+...   +......+           +.-.....
T Consensus         2 ~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~----~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           2 KAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPD----FEARMALKK---GYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCS----HHHHHHHHT---TCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             eEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcH----HHHHHHHhc---CCceEecccccceeecccCcccCCChh
Confidence            6788998 6999999999988776 5665553 3331    111111111   11111111           11112445


Q ss_pred             HHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236           71 EAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG  117 (124)
Q Consensus        71 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss  117 (124)
                      .+++++|+|+=|.|...        +..-++.-.+.| + +.|++++
T Consensus        74 ~~~~~vDvViEcTG~f~--------~~~~~~~hl~~G-~-K~vi~~~  110 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEGI--------GAKNLKMYKEKG-I-KAIFQGG  110 (171)
T ss_dssp             HHHHTCSEEEECCSTTH--------HHHHHHHHHHTT-C-EEEECTT
T ss_pred             HhhcCCCEEEEccCCCC--------CHHHHHHHHHcC-C-CEEEECC
Confidence            55678999999999432        223344445677 4 4666553

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=95.67  E-value=0.029  Score=31.14  Aligned_cols=35  Identities=31%  Similarity=0.480  Sum_probs=28.6

Q ss_pred             CceEEEEccCChhcHHHHHHHh---hCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASL---AQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~---~~g~~v~~~~r~~~   38 (124)
                      +++++|.|| |++|-.++..|.   +.|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            468999996 999999997654   35889999998863

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.64  E-value=0.086  Score=31.40  Aligned_cols=93  Identities=18%  Similarity=0.207  Sum_probs=54.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCCCCCchHHHHHh-hhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPDIGLDIDKLQML-LSFKK-QGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      .++.|.| +|.+|+..++.+... +.+++++ ++++     ++.+.. ..+.- ....+    ..|.+++-+ -.++|+|
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~-----~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v   70 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSL-----EKAKAFATANNYPESTKI----HGSYESLLE-DPEIDAL   70 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSH-----HHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCc-----cccccchhccccccceee----cCcHHHhhh-cccccee
Confidence            5789998 589999999988765 5788765 4543     222222 22111 11222    223333322 1358988


Q ss_pred             EEeCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.++..                   ....+......+++.+.+.+
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~  117 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANG  117 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTT
T ss_pred             eecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhC
Confidence            88765431                   12346677778888887766

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.64  E-value=0.0084  Score=36.64  Aligned_cols=32  Identities=19%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|| |.-|...+..|+++|++|.++.+++
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            3799985 9999999999999999999999875

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.62  E-value=0.031  Score=36.41  Aligned_cols=34  Identities=18%  Similarity=0.257  Sum_probs=29.3

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      ++++++|-| .|.+|+++++.|.+.|.+|+.++.+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            357899998 5999999999999999999887643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=95.60  E-value=0.0066  Score=39.10  Aligned_cols=33  Identities=18%  Similarity=0.545  Sum_probs=29.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~   37 (124)
                      .+|+|.|| |-+|..++.+|+++|. +|+++.|++
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            36899996 9999999999999995 799998874

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=95.59  E-value=0.075  Score=32.45  Aligned_cols=92  Identities=14%  Similarity=0.157  Sum_probs=52.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-cc----------------
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-SF----------------   63 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----------------   63 (124)
                      +++.|.|- |+-|..++..+.+.+   .+.+++..+.     +..+   ....+ ..+.-+ +.                
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~---~~~a~-~ki~iG~~~t~G~G~g~~p~~g~~a   70 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-----QVLE---ASNAD-VKIQIGENITRGLGAGGRPEIGEQA   70 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-----HHHH---TCCCS-EEEECCTTTTTTSCCTTCHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-----HHHh---cCCcc-eEEecccccCCCcccccCchhhHhH
Confidence            46888885 888999999998866   3445555543     2222   21111 122221 11                


Q ss_pred             --CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           64 --ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        64 --~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                        .+.+.+.+.+++.|.||.+||...  ..-.-++..+++.+++.+
T Consensus        71 a~e~~~~I~~~l~~~d~vfi~AGlGG--gTGtgaapviA~~ake~g  114 (194)
T d1w5fa1          71 ALESEEKIREVLQDTHMVFITAGFGG--GTGTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HHHTHHHHHHHTTTCSEEEEEEETTS--SHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCC--CcccchHHHHHHHHHHcC
Confidence              134678888888999999997332  122233344555555544

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.55  E-value=0.01  Score=38.94  Aligned_cols=36  Identities=25%  Similarity=0.401  Sum_probs=30.3

Q ss_pred             CCC-ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCC
Q 033236            1 MGK-SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPD   37 (124)
Q Consensus         1 m~~-~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~   37 (124)
                      |.. |+|+|+|| |.-|...+..|+++|  ++|+++.|++
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            554 67999996 999999999998876  6999998885

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.51  E-value=0.009  Score=36.21  Aligned_cols=33  Identities=27%  Similarity=0.288  Sum_probs=28.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~   37 (124)
                      |||+|.|| |++|..++..|.+.  +.+|+++.|.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999996 99999999999876  46898888765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=95.49  E-value=0.0079  Score=38.26  Aligned_cols=32  Identities=31%  Similarity=0.395  Sum_probs=28.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|| |..|..++.+|+++|++|+++.+.+
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3889986 9999999999999999999998863

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=95.47  E-value=0.018  Score=33.23  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=29.2

Q ss_pred             CceEEEEccC---ChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGT---GYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~---g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++.|.|++   +..|..+++.|.+.|+++..+--++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~   50 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF   50 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence            4689999988   6789999999999999998775443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.45  E-value=0.0081  Score=35.71  Aligned_cols=34  Identities=26%  Similarity=0.355  Sum_probs=28.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++|+|.|| |.+|..++..|.+.|.++.++.+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999996 9999999999999998776654443

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.094  Score=29.80  Aligned_cols=73  Identities=16%  Similarity=0.201  Sum_probs=51.0

Q ss_pred             CceEEEEcc----------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH
Q 033236            3 KSKVLVVGG----------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA   72 (124)
Q Consensus         3 ~~~ili~Ga----------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (124)
                      .++++|.|+          --+.+.+.+++|.+.|++++.+..+|..-+        . ...-..-+-...-..+.+.+.
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs--------t-d~d~aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM--------T-DPEMADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG--------G-CGGGSSEEECSCCCHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh--------c-ChhhcceeeeecCCHHHHHHH
Confidence            478999997          235678899999999999999998882210        0 001122344455567888888


Q ss_pred             hc--ccCEEEEeCc
Q 033236           73 VK--RVDVVICTIS   84 (124)
Q Consensus        73 ~~--~~d~vi~~a~   84 (124)
                      ++  ++|.|+-..|
T Consensus        78 i~~E~pd~il~~~G   91 (127)
T d1a9xa3          78 IEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHCCSEEECSSS
T ss_pred             HHHhCcCCeEEEee
Confidence            75  6999988777

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.035  Score=31.76  Aligned_cols=35  Identities=23%  Similarity=0.368  Sum_probs=28.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhh----CCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA----QGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~----~g~~v~~~~r~~~   38 (124)
                      .++++|.|| |++|..++..|.+    .|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            467999986 9999999988853    5899999988763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.013  Score=37.45  Aligned_cols=34  Identities=24%  Similarity=0.432  Sum_probs=30.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ..+|+|+|| |.-|...+..|.+.|++|+++-+++
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            457999996 9999999999999999999997664

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.11  Score=30.25  Aligned_cols=90  Identities=18%  Similarity=0.102  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHH-HHHHHhhC-CCeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRR-IVKASLAQ-GHETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~-l~~~l~~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++++.|.| +|.+|.. .++.+... +.+++++. +++.    ......+.+   ++.+    .++   +..+.+++|+|
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~----~~~~~~~~~---~~~~----~~~---~~~l~~~~D~V   65 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRA----KALPICESW---RIPY----ADS---LSSLAASCDAV   65 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCT----THHHHHHHH---TCCB----CSS---HHHHHTTCSEE
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhH----hhhhhhhcc---cccc----ccc---chhhhhhcccc
Confidence            36799998 5889975 45666554 57777664 5441    111222221   1111    223   33345789998


Q ss_pred             EEeCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.++..                   ....+..-...+.+.+.+.+
T Consensus        66 ~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~  112 (164)
T d1tlta1          66 FVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK  112 (164)
T ss_dssp             EECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred             cccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcC
Confidence            88775431                   12345677777888887777

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.22  E-value=0.028  Score=33.29  Aligned_cols=76  Identities=14%  Similarity=0.100  Sum_probs=43.1

Q ss_pred             ceEEEEccCChhcHHHHHH-Hhh--C---CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKA-SLA--Q---GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~-l~~--~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      ||+.|.|| |.+|...+-. +++  .   ..++.+++.++... ....+...............     .+..+.++++|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~-~~~~d~~~~~~~~~~~~~~t-----~~~~~~l~~aD   73 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQ-KIVVDFVKRLVKDRFKVLIS-----DTFEGAVVDAK   73 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHH-HHHHHHHHHHHTTSSEEEEC-----SSHHHHHTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHH-HHHHHHHHhhhccCceEEEe-----cCcccccCCCC
Confidence            67999997 6677666633 322  1   35899999886221 11112222222223332221     22356788999


Q ss_pred             EEEEeCccc
Q 033236           78 VVICTISGV   86 (124)
Q Consensus        78 ~vi~~a~~~   86 (124)
                      +|+..++..
T Consensus        74 vVVita~~~   82 (162)
T d1up7a1          74 YVIFQFRPG   82 (162)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEecccC
Confidence            999999854

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.026  Score=34.68  Aligned_cols=79  Identities=14%  Similarity=0.085  Sum_probs=44.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHH-HHHhhhh-ccCCeEEEE-cccCChHHHHHHhc-ccCEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDK-LQMLLSF-KKQGAHLIE-ASFADHRSLVEAVK-RVDVV   79 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~-~D~~~~~~~~~~~~-~~d~v   79 (124)
                      |+++++| ++..|..+++.|.+.|++|..+...++...... ......+ ...++.++. -++.+++.++.+.+ ++|++
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            6788887 467899999999999999976653321110000 0000011 123555554 45556655544433 58877


Q ss_pred             EEeC
Q 033236           80 ICTI   83 (124)
Q Consensus        80 i~~a   83 (124)
                      +...
T Consensus        80 i~~g   83 (203)
T d2blna2          80 FSFY   83 (203)
T ss_dssp             EEES
T ss_pred             eeee
Confidence            7654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.18  E-value=0.017  Score=36.16  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=30.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      .++|+|.|| |..|..++..|.+.| .+|.++.|++
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            368999996 999999999999999 5999999876

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.16  E-value=0.022  Score=33.46  Aligned_cols=34  Identities=21%  Similarity=0.395  Sum_probs=28.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~   37 (124)
                      +++++|.|| |.+|.-.+..+.+.|. .|+++.|.+
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            467999986 9999999999999985 577888765

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=95.09  E-value=0.013  Score=36.02  Aligned_cols=33  Identities=30%  Similarity=0.487  Sum_probs=29.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~   37 (124)
                      .+|+|.|| |.-|...+..|.++|+ +|+++.+++
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            36899996 9999999999999995 799998875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.05  E-value=0.1  Score=30.82  Aligned_cols=32  Identities=16%  Similarity=-0.037  Sum_probs=25.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+||..|.  +.|+ .+..|+++|++|++++.++
T Consensus        21 ~~rvLd~GC--G~G~-~a~~la~~G~~V~gvD~S~   52 (201)
T d1pjza_          21 GARVLVPLC--GKSQ-DMSWLSGQGYHVVGAELSE   52 (201)
T ss_dssp             TCEEEETTT--CCSH-HHHHHHHHCCEEEEEEECH
T ss_pred             CCEEEEecC--cCCH-HHHHHHHcCCceEeecccH
Confidence            568999983  3465 4558888999999999987

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.92  E-value=0.09  Score=32.18  Aligned_cols=81  Identities=10%  Similarity=0.095  Sum_probs=50.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCC-------------CchH-HHHHhhhhccCCeEEEEc-ccCCh
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIG-------------LDID-KLQMLLSFKKQGAHLIEA-SFADH   66 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~-D~~~~   66 (124)
                      ++|.|+|| |--|...+..|.+.  |++|+++.+.+..             .... .......+...++.+... .+...
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   80 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRD   80 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBTTT
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCCCceehhhccccccccccchhhhhhhhhcCCeeEEeeEEeCcc
Confidence            57999995 99999999999765  7899999888631             0001 112222334556665532 22222


Q ss_pred             HHHHHHhcccCEEEEeCcc
Q 033236           67 RSLVEAVKRVDVVICTISG   85 (124)
Q Consensus        67 ~~~~~~~~~~d~vi~~a~~   85 (124)
                      .++..+.+..|.++.+.|.
T Consensus        81 ~~~~~l~~~~d~v~~a~Ga   99 (230)
T d1cjca2          81 VTVQELQDAYHAVVLSYGA   99 (230)
T ss_dssp             BCHHHHHHHSSEEEECCCC
T ss_pred             ccHHHHHhhhceEEEEeec
Confidence            3455555678888887763

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.13  Score=31.39  Aligned_cols=82  Identities=13%  Similarity=0.122  Sum_probs=48.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH-----HHhhhhccCCeEEEEcccCChHHHHHHhc--
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL-----QMLLSFKKQGAHLIEASFADHRSLVEAVK--   74 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   74 (124)
                      +.|+|+++| ++..+..+++.|.+.|+++.++...+........     .........++.....+..+.+...+.++  
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL   80 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence            468999998 4778888999999999998766543311100000     00111123456666666656666666655  


Q ss_pred             ccCEEEEeCc
Q 033236           75 RVDVVICTIS   84 (124)
Q Consensus        75 ~~d~vi~~a~   84 (124)
                      ++|+++....
T Consensus        81 ~~d~~v~~~~   90 (206)
T d1fmta2          81 QADVMVVVAY   90 (206)
T ss_dssp             TCSEEEEESC
T ss_pred             cceEEEeecc
Confidence            4787666443

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=94.85  E-value=0.13  Score=31.35  Aligned_cols=80  Identities=16%  Similarity=0.088  Sum_probs=47.8

Q ss_pred             EEEEccCChhcHHHHH-HH---hhCC-----CeEEEEeCCCCCCchHHHHHhhhh------------ccCCeEEEEcccC
Q 033236            6 VLVVGGTGYIGRRIVK-AS---LAQG-----HETYVLQRPDIGLDIDKLQMLLSF------------KKQGAHLIEASFA   64 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~-~l---~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~   64 (124)
                      ++|+||+|.+.+.-+- .|   ...|     ..|+++.|++.+.+.-.....+.+            .-.++..+.+|+.
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~~   87 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVT   87 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCTT
T ss_pred             EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEeec
Confidence            4589999999886543 33   2233     578888998754332221111111            1246788999998


Q ss_pred             ChHHHHHHhc-----------ccCEEEEeCcc
Q 033236           65 DHRSLVEAVK-----------RVDVVICTISG   85 (124)
Q Consensus        65 ~~~~~~~~~~-----------~~d~vi~~a~~   85 (124)
                      ++++..++.+           ....+++.|-|
T Consensus        88 ~~~~~~~l~~~l~~~~~~~~~~~~rifYLAvp  119 (195)
T d1h9aa1          88 DAASYAVLKEAIEEAADKFDIDGNRIFYMSVA  119 (195)
T ss_dssp             CTTTHHHHHHHHHHHHHHHTCCSCEEEEECSC
T ss_pred             cHhhHHHHHHHHHHHHhhcCCCcceEEEEecC
Confidence            8876555432           23578887754

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.77  E-value=0.0016  Score=40.43  Aligned_cols=25  Identities=28%  Similarity=0.424  Sum_probs=22.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCe
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHE   29 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~   29 (124)
                      |+|+|.|| |-+|..++..|+++|++
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHS   25 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC
Confidence            67999996 99999999999999864

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.75  E-value=0.18  Score=31.03  Aligned_cols=93  Identities=17%  Similarity=0.200  Sum_probs=53.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-cc---------------
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-SF---------------   63 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~---------------   63 (124)
                      ..++.|.|- |+-|..++..+.+.+   .+.+++..+.     +...   .... ...+..+ +.               
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~---~~~~-~~ki~ig~~~t~g~Gag~~p~~g~~   84 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-----QQLI---RTKA-DKKILIGKKLTRGLGAGGNPKIGEE   84 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-----HHHH---TSCC-SEEEECCTTTTTTBCCTTCHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-----HHHh---cCCc-chhcccccccccccccccchHHHHH
Confidence            357899984 888999999998876   3445555543     2222   2111 1122211 11               


Q ss_pred             ---CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           64 ---ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        64 ---~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                         .+.+.+.+.++++|.||.+||...-  .-.-....+++.+++.+
T Consensus        85 aa~e~~~~I~~~l~~~d~vfi~AGlGGG--TGsgaapvia~~ake~g  129 (209)
T d2vapa1          85 AAKESAEEIKAAIQDSDMVFITCGLGGG--TGTGSAPVVAEISKKIG  129 (209)
T ss_dssp             HHHHTHHHHHHHHTTCSEEEEEEETTSS--HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCCEEEEEEeCCCC--ccccHHHHHHHHHHHcC
Confidence               1335788888899999999974321  12223334555555544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.73  E-value=0.002  Score=37.81  Aligned_cols=30  Identities=27%  Similarity=0.313  Sum_probs=19.8

Q ss_pred             EEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            7 LVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         7 li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      -+.| +|.+|+++++.|.+.++.+.+..|++
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~   32 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSI   32 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            4666 69999999987765444445777876

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.69  E-value=0.0068  Score=36.29  Aligned_cols=32  Identities=22%  Similarity=0.266  Sum_probs=25.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEe
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ   34 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~   34 (124)
                      |..+|+|.|+ |.+|..++..|.+.|.++.++.
T Consensus         2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEE
Confidence            3456999995 9999999999999886654443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.67  E-value=0.18  Score=29.16  Aligned_cols=31  Identities=23%  Similarity=0.206  Sum_probs=25.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ||.+.| .|..|..+++.|++.|+.+ +..|++
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            578888 4999999999999999865 456665

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=94.65  E-value=0.015  Score=36.64  Aligned_cols=33  Identities=15%  Similarity=0.223  Sum_probs=29.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .++|.|| |.-|...+..|.+.|.+|.++.+++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4899996 99999999999999999999999863

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.64  E-value=0.031  Score=35.17  Aligned_cols=35  Identities=20%  Similarity=0.221  Sum_probs=31.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++++|-| .|.+|+++++.|.+.|.++++.+.++
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccH
Confidence            467899998 59999999999999999999887765

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=94.62  E-value=0.022  Score=35.36  Aligned_cols=33  Identities=24%  Similarity=0.455  Sum_probs=29.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      -.++|.|| |-.|...+..|.+.|++|.++.+++
T Consensus         3 yDViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           3 YDVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            45899996 9999999999999999999999876

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.61  E-value=0.035  Score=35.11  Aligned_cols=34  Identities=18%  Similarity=0.189  Sum_probs=29.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      ++++++|-| .|.+|+++++.|.+.|.+|+.++..
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            568899998 6999999999999999999877644

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.59  E-value=0.078  Score=32.46  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=26.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r   35 (124)
                      |+|++.| ++..|..+++.|.+.|++|.++..
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence            6799998 578899999999999999976653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.50  E-value=0.025  Score=32.98  Aligned_cols=31  Identities=29%  Similarity=0.358  Sum_probs=26.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +++|.|| |++|..++..|.+ +.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEeccc
Confidence            6899986 9999999998854 77999998765

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.37  E-value=0.16  Score=30.81  Aligned_cols=105  Identities=18%  Similarity=0.186  Sum_probs=55.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhcc------CCeEE--------------
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKK------QGAHL--------------   58 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~~--------------   58 (124)
                      |.+++.|-| -|-||+.+.+.+++++   .++-++.-+....+.+....+-...+      ..++.              
T Consensus         1 M~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i   79 (190)
T d1k3ta1           1 MPIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLV   79 (190)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEE
T ss_pred             CCeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceE
Confidence            347899998 5999999999988764   23333221111112233322222211      11111              


Q ss_pred             EE-------cccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           59 IE-------ASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        59 ~~-------~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +.       ..-.||+++.=--.++|+|+=|.|...        +..-++.-.+.| +++++.+.
T Consensus        80 ~~g~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~--------~~~~a~~hl~~G-akkViiSA  135 (190)
T d1k3ta1          80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFT--------AKAAAEGHLRGG-ARKVVISA  135 (190)
T ss_dssp             ETTEEEEEEECCSCGGGSCHHHHTCCEEEECSSSCC--------BHHHHTHHHHTT-CSEEEESS
T ss_pred             EcCceEEecccCCChhHCCHhhcCCcEEEEeccccc--------ccccchhhcccC-cceeeecc
Confidence            10       112345544333347999999999543        223333444677 78888755

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.028  Score=36.16  Aligned_cols=31  Identities=39%  Similarity=0.513  Sum_probs=28.2

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|+|| |.-|...+..|.++|++|+++.+++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789985 9999999999999999999998765

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.086  Score=32.52  Aligned_cols=32  Identities=16%  Similarity=0.102  Sum_probs=24.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      +.+||..| ||. |+ .+..|++.|++|++++-++
T Consensus        46 ~~rvLd~G-CG~-G~-~a~~LA~~G~~V~gvD~S~   77 (229)
T d2bzga1          46 GLRVFFPL-CGK-AV-EMKWFADRGHSVVGVEISE   77 (229)
T ss_dssp             SCEEEETT-CTT-CT-HHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEeC-CCC-cH-HHHHHHhCCCcEEEEeCCH
Confidence            45788888 343 54 4677889999999999987

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=94.11  E-value=0.031  Score=36.30  Aligned_cols=32  Identities=28%  Similarity=0.418  Sum_probs=29.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|| |..|...+..|.+.|.+++++.+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            5899996 9999999999999999999998764

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.1  Score=33.76  Aligned_cols=27  Identities=30%  Similarity=0.324  Sum_probs=24.1

Q ss_pred             cCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236           11 GTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus        11 a~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|..|.+++++++.+|++|+++.+..
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            579999999999999999999987653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.90  E-value=0.11  Score=32.71  Aligned_cols=34  Identities=15%  Similarity=0.236  Sum_probs=27.9

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~   36 (124)
                      ++++++|-| .|.+|.++++.|.++ |.+|+.+...
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            467899998 499999999999864 8998887654

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=93.84  E-value=0.049  Score=34.42  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=28.6

Q ss_pred             ceEEEEccCChhcHHHH-----HHHhhCCCeEEEEeCCCCC
Q 033236            4 SKVLVVGGTGYIGRRIV-----KASLAQGHETYVLQRPDIG   39 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~-----~~l~~~g~~v~~~~r~~~~   39 (124)
                      ++|.|+| -|++|+-.+     ..|++.|++|.+++.+++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~   41 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA   41 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence            6788998 799998655     4788899999999998753

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=93.77  E-value=0.072  Score=35.17  Aligned_cols=95  Identities=9%  Similarity=-0.042  Sum_probs=58.8

Q ss_pred             EEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH-HHHHHhcccCEEEEeCccc
Q 033236            8 VVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR-SLVEAVKRVDVVICTISGV   86 (124)
Q Consensus         8 i~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~d~vi~~a~~~   86 (124)
                      +..|+|.++..+    ++.+.+|+++..+++.-+. .........-.+++++.+|..+.- .........|+||...+  
T Consensus       219 LycG~G~fsl~L----a~~~~~V~gvE~~~~ai~~-A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPP--  291 (358)
T d1uwva2         219 LFCGMGNFTLPL----ATQAASVVGVEGVPALVEK-GQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPA--  291 (358)
T ss_dssp             ESCTTTTTHHHH----HTTSSEEEEEESCHHHHHH-HHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCC--
T ss_pred             ecccccccchhc----cccccEEEeccCcHHHHHH-HHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeCCC--
Confidence            667788888765    4567899999888622111 111111223457889999876532 22222345788877654  


Q ss_pred             cceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           87 HFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                            ..|....++.+.+.+ .+++||+|
T Consensus       292 ------R~G~~~~~~~l~~~~-~~~ivYVS  314 (358)
T d1uwva2         292 ------RAGAAGVMQQIIKLE-PIRIVYVS  314 (358)
T ss_dssp             ------TTCCHHHHHHHHHHC-CSEEEEEE
T ss_pred             ------CccHHHHHHHHHHcC-CCEEEEEe
Confidence                  223345777777887 79999998

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.74  E-value=0.075  Score=32.51  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=28.9

Q ss_pred             CCceEEEEccCChhcHHH-----HHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRI-----VKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l-----~~~l~~~g~~v~~~~r~~   37 (124)
                      |++.|.|+|+-|++|+-.     +..|++.|.+|.+++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467789999999999854     555778899999998663

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.74  E-value=0.075  Score=33.04  Aligned_cols=93  Identities=11%  Similarity=0.152  Sum_probs=53.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .++++=.|. | .|+ ++..|++.|.+|++++.++.-.+.++ ++. .....+++++.+|+.+.+    .-+..|+|+..
T Consensus        38 ~~~vLDiGC-G-~G~-~~~~l~~~g~~v~GvD~S~~ml~~A~-~~~-~~~~~~v~~~~~d~~~~~----~~~~fD~i~~~  108 (246)
T d1y8ca_          38 FDDYLDLAC-G-TGN-LTENLCPKFKNTWAVDLSQEMLSEAE-NKF-RSQGLKPRLACQDISNLN----INRKFDLITCC  108 (246)
T ss_dssp             TTEEEEETC-T-TST-THHHHGGGSSEEEEECSCHHHHHHHH-HHH-HHTTCCCEEECCCGGGCC----CSCCEEEEEEC
T ss_pred             CCeEEEEeC-c-CCH-HHHHHHHhCCccEeeccchhhhhhcc-ccc-cccCccceeeccchhhhc----cccccccccee
Confidence            457887873 3 344 45678888999999998872111111 111 112457899999987654    23468988876


Q ss_pred             CccccceecchHHHHHHHHHHHH
Q 033236           83 ISGVHFRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~  105 (124)
                      .+...+. .+..-...+++.+.+
T Consensus       109 ~~~~~~~-~~~~~~~~~l~~~~~  130 (246)
T d1y8ca_         109 LDSTNYI-IDSDDLKKYFKAVSN  130 (246)
T ss_dssp             TTGGGGC-CSHHHHHHHHHHHHT
T ss_pred             eeeeecc-CCHHHHHHHHHHHHH
Confidence            5544332 222233344555544

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=93.69  E-value=0.14  Score=32.40  Aligned_cols=99  Identities=24%  Similarity=0.272  Sum_probs=59.0

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++=.| |+|.+..++++.+...| +|+.+++++.-.+. ..+..+.+ ...++++..+|+.+.-  .  -+.+|.|+
T Consensus        86 G~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~-A~~n~~~~~~~~nv~~~~~Di~~~~--~--~~~fD~V~  159 (250)
T d1yb2a1          86 GMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKK-AMDNLSEFYDIGNVRTSRSDIADFI--S--DQMYDAVI  159 (250)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHH-HHHHHHTTSCCTTEEEECSCTTTCC--C--SCCEEEEE
T ss_pred             cCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHH-HHHHHHHhcCCCceEEEEeeeeccc--c--cceeeeee
Confidence            56788777 45666777766664444 89999988621111 11222222 3457899999986531  0  12478877


Q ss_pred             EeCc-ccc----------------ceecchHHHHHHHHHHHHhC
Q 033236           81 CTIS-GVH----------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        81 ~~a~-~~~----------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ...+ +..                .+.+++....++++++.+.|
T Consensus       160 ld~p~p~~~l~~~~~~LKpGG~lv~~~P~i~Qv~~~~~~l~~~g  203 (250)
T d1yb2a1         160 ADIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASG  203 (250)
T ss_dssp             ECCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGT
T ss_pred             ecCCchHHHHHHHHHhcCCCceEEEEeCCcChHHHHHHHHHHCC
Confidence            6443 221                13466677777888887766

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=93.66  E-value=0.33  Score=32.08  Aligned_cols=70  Identities=24%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhh-CC-CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLA-QG-HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~-~g-~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++.|+| +|..+..-++.+.. .+ .+|.+.+|++    +...+....+. ..++++..++     +++++++++|+|+
T Consensus       129 ~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~----~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADIi~  198 (340)
T d1x7da_         129 RKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDP----LATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDIIT  198 (340)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSH----HHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSEEE
T ss_pred             ceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecCh----HHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCcee
Confidence            5788998 58999988888765 34 7999999987    34444444443 3467766654     4778888999888


Q ss_pred             EeC
Q 033236           81 CTI   83 (124)
Q Consensus        81 ~~a   83 (124)
                      .+.
T Consensus       199 t~T  201 (340)
T d1x7da_         199 TVT  201 (340)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            765

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.61  E-value=0.067  Score=33.82  Aligned_cols=36  Identities=11%  Similarity=0.220  Sum_probs=30.0

Q ss_pred             CceEEEEccCChhcHHH-----HHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRI-----VKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l-----~~~l~~~g~~v~~~~r~~~   38 (124)
                      +.+++++.|-|++|+-.     +..|+++|++|.+++.+++
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            45788887799999976     5778889999999999874

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.54  E-value=0.044  Score=29.98  Aligned_cols=35  Identities=20%  Similarity=0.174  Sum_probs=28.4

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+++|.|+ |.-|..++..|++...+++...|++
T Consensus        31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            3689999995 8999999999998887766665554

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.52  E-value=0.22  Score=30.96  Aligned_cols=77  Identities=13%  Similarity=0.168  Sum_probs=52.3

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++=.| |+|..-.++++..-..| .|++++.++    ..........+ ..++..+..|..+++........+|+++
T Consensus        74 G~~VLDlGaGsG~~t~~la~~VG~~G-~V~aVD~s~----~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIVGWEG-KIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIF  148 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHHCTTS-EEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             CCEEEEeccCCCHHHHHHHHHhCCCC-EEEEEeCcH----HHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEE
Confidence            56788777 55777777777554455 899999987    22222222222 3467888999998888877777788887


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      +...
T Consensus       149 ~d~~  152 (227)
T d1g8aa_         149 EDVA  152 (227)
T ss_dssp             ECCC
T ss_pred             EEcc
Confidence            7543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.41  E-value=0.19  Score=29.80  Aligned_cols=100  Identities=24%  Similarity=0.259  Sum_probs=56.6

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc------CCeE------------EEEcccCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK------QGAH------------LIEASFAD   65 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~------------~~~~D~~~   65 (124)
                      +++.|-| -|-||+.+.+.|.+++.+|.++....   +.+....+-...+      ..++            +....-.+
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~---~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~   76 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLT---DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD   76 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS---CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCc---chhhhhheeecccccCccccccccccceeEecceeEEEEecCC
Confidence            4678887 59999999999998888877665322   1222222222211      0111            11112234


Q ss_pred             hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           66 HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        66 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++++.=.-.++|+|+=|.|....        .+-++.-.+.| +++++.+.
T Consensus        77 p~~i~W~~~gvdiViEcTG~f~~--------~~~~~~hl~~g-akkViiSA  118 (168)
T d2g82a1          77 PKEIPWAEAGVGVVIESTGVFTD--------ADKAKAHLEGG-AKKVIITA  118 (168)
T ss_dssp             GGGCCTGGGTEEEEEECSSSCCB--------HHHHTHHHHTT-CSEEEESS
T ss_pred             hHHCcccccCCceeEeccccccc--------hHHhhhhhccc-cceeeecc
Confidence            44444333468999999985432        23333444567 78888865

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.40  E-value=0.13  Score=31.53  Aligned_cols=37  Identities=19%  Similarity=0.404  Sum_probs=29.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHh--------------------hCC-CeEEEEeCCCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASL--------------------AQG-HETYVLQRPDIG   39 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~--------------------~~g-~~v~~~~r~~~~   39 (124)
                      .+++++|+|+ |.++.-+++.++                    +.| .+|+++.|....
T Consensus        38 ~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~   95 (216)
T d1lqta1          38 SGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL   95 (216)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred             cCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence            3678999995 999999998877                    566 689999988643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.39  E-value=0.19  Score=28.98  Aligned_cols=93  Identities=12%  Similarity=0.162  Sum_probs=49.9

Q ss_pred             CCceEE-EEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCE
Q 033236            2 GKSKVL-VVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         2 ~~~~il-i~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      ++++++ +..|+|.+|.    +.+.+| .+|+.++.++...+ ...+..+... ..+++++++|..+  .+...-++.|+
T Consensus        14 ~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~-~~~~n~~~~~~~~~~~ii~~D~~~--~l~~~~~~fDi   86 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQA-IIQDNIIMTKAENRFTLLKMEAER--AIDCLTGRFDL   86 (152)
T ss_dssp             CSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHH-HHHHHHHTTTCGGGEEEECSCHHH--HHHHBCSCEEE
T ss_pred             CCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhh-hhhhhhhhcccccchhhhcccccc--cccccccccce
Confidence            355666 4445666554    234556 58999998872111 0112222222 3458899998743  34444556898


Q ss_pred             EEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           79 VICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |+...+.      ........++.+.+.+
T Consensus        87 If~DPPy------~~~~~~~~l~~i~~~~  109 (152)
T d2esra1          87 VFLDPPY------AKETIVATIEALAAKN  109 (152)
T ss_dssp             EEECCSS------HHHHHHHHHHHHHHTT
T ss_pred             eEechhh------ccchHHHHHHHHHHCC
Confidence            8876532      1223344556665543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.38  E-value=0.045  Score=34.92  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=29.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r   35 (124)
                      ++++++|-| .|.+|+++++.|.+.|.+|+.++.
T Consensus        35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            467899998 699999999999999999988754

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.34  E-value=0.32  Score=29.60  Aligned_cols=91  Identities=16%  Similarity=0.125  Sum_probs=51.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-----------c--------
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-----------S--------   62 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------D--------   62 (124)
                      .+-|.| -|+.|..++..+.+.+   .+.+++..+.+        .+...+ ....+..+           |        
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~--------~L~~~~-~~~ki~iG~~~~~g~G~gg~p~~g~~aa   72 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQ--------ALKNIA-ARTVLQLGPGVTKGLGAGANPEVGRQAA   72 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTG--------GGSSCS-CSEEEECCHHHHTTBCCCSCHHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHH--------HHhcCC-ccceeccccccccCCCCCCChHHHHHHH
Confidence            366787 4888999999998876   35566655541        111111 11111111           1        


Q ss_pred             cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      ..+.+.+.+.+++.|.||.+||...-  .-.-+...+++.+++.+
T Consensus        73 ~e~~~~I~~~l~~~d~vfi~AGlGGG--TGtgaapviA~~ake~g  115 (198)
T d1ofua1          73 LEDRERISEVLEGADMVFITTGMGGG--TGTGAAPIIAEVAKEMG  115 (198)
T ss_dssp             HHTHHHHHHHHTTCSEEEEEEETTSS--HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCeEEEEecCCCC--ccccHHHHHHHHHHHcC
Confidence            12456788888899999999974321  22233344555555554

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.30  E-value=0.36  Score=30.99  Aligned_cols=97  Identities=15%  Similarity=0.105  Sum_probs=51.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++=+|. | .|........+.|.+|++++.++...+.......+.-...++.+..+|..+.+      ...|.|+..
T Consensus        63 G~~VLDiGC-G-~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~------~~fD~i~si  134 (285)
T d1kpga_          63 GMTLLDVGC-G-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------EPVDRIVSI  134 (285)
T ss_dssp             TCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------CCCSEEEEE
T ss_pred             CCEEEEecC-c-chHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccc------ccccceeee
Confidence            567888873 2 34333333334689999999987222111111111112356778888875432      457888776


Q ss_pred             CccccceecchHHHHHHHHHHHHhC
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      -...+....|......-+..+.+-|
T Consensus       135 ~~~eh~~~~~~~~~~~~~~r~Lkpg  159 (285)
T d1kpga_         135 GAFEHFGHERYDAFFSLAHRLLPAD  159 (285)
T ss_dssp             SCGGGTCTTTHHHHHHHHHHHSCTT
T ss_pred             hhhhhcCchhHHHHHHHHHhhcCCC
Confidence            5544444455444444333333333

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.30  E-value=0.18  Score=30.66  Aligned_cols=80  Identities=15%  Similarity=0.078  Sum_probs=50.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-------CeEEEEeCCCCC---------C-----chHHHHHhhhhccCCeEEEEc-
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-------HETYVLQRPDIG---------L-----DIDKLQMLLSFKKQGAHLIEA-   61 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~-   61 (124)
                      .+|+|.|+ |--|...+.+|++.|       ++|+++.+.+..         +     ..............++++... 
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG~~~~gi~p~~~~~~~~~~~~~~~~~~~g~~~~~~~   81 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV   81 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCCeeeeccCcccccchhhhhhhhhhhccCCceEEEEE
Confidence            58999995 999999999999887       589999887521         0     111112222223455665433 


Q ss_pred             ccCChHHHHHHhcccCEEEEeCc
Q 033236           62 SFADHRSLVEAVKRVDVVICTIS   84 (124)
Q Consensus        62 D~~~~~~~~~~~~~~d~vi~~a~   84 (124)
                      .+.....+..+..+.|+++...|
T Consensus        82 ~v~~~~~~~~~~~~~~~v~~atG  104 (239)
T d1lqta2          82 VVGEHVQPGELSERYDAVIYAVG  104 (239)
T ss_dssp             CBTTTBCHHHHHHHSSEEEECCC
T ss_pred             EeccccchhhhhccccceeeecC
Confidence            34344455566667888888766

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=93.18  E-value=0.051  Score=34.82  Aligned_cols=32  Identities=22%  Similarity=0.382  Sum_probs=29.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |..|...+..|++.|.+|+++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4899985 9999999999999999999998875

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=93.17  E-value=0.052  Score=35.66  Aligned_cols=31  Identities=26%  Similarity=0.285  Sum_probs=27.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .++|.| +|.-|..++.+|++.|++|.++.+-
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            378888 5999999999999999999999874

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.16  E-value=0.12  Score=31.93  Aligned_cols=36  Identities=11%  Similarity=0.308  Sum_probs=30.0

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhC--------------------C-CeEEEEeCCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQ--------------------G-HETYVLQRPDI   38 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~--------------------g-~~v~~~~r~~~   38 (124)
                      .+++++|.|+ |.++.-+++.+++.                    | .+|+++.|...
T Consensus        38 ~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          38 SCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             TSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             cCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            3678999985 99999999999873                    5 78999998874

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=93.13  E-value=0.46  Score=28.40  Aligned_cols=71  Identities=15%  Similarity=0.234  Sum_probs=48.4

Q ss_pred             CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh--cccCEEEEeCccccc
Q 033236           12 TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV--KRVDVVICTISGVHF   88 (124)
Q Consensus        12 ~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi~~a~~~~~   88 (124)
                      |-+-|.|. +.+++++-+|++++|++     ............++.++..+.++-+....-.  +++|.|+.-.|....
T Consensus        26 T~G~GGhs-~~iL~~~~~viaiD~D~-----~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          26 TLGGAGHA-RGILERGGRVIGLDQDP-----EAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSF   98 (182)
T ss_dssp             TCTTSHHH-HHHHHTTCEEEEEESCH-----HHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCHH
T ss_pred             CCCCcHHH-HHHhcccCcEEEEhhhh-----hHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCHH
Confidence            33335554 55566667999999998     3334444445678999999998876665443  469999988886543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=93.11  E-value=0.068  Score=34.83  Aligned_cols=31  Identities=23%  Similarity=0.410  Sum_probs=27.7

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .++|.| +|.-|..++.+|++.|++|.++.+-
T Consensus         6 DviIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           6 DVVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cEEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            488998 5999999999999999999999764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.10  E-value=0.36  Score=29.62  Aligned_cols=93  Identities=12%  Similarity=0.158  Sum_probs=51.5

Q ss_pred             eEEEEccCChhcH-HHHHHHhhC-CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236            5 KVLVVGGTGYIGR-RIVKASLAQ-GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV   79 (124)
Q Consensus         5 ~ili~Ga~g~iG~-~l~~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   79 (124)
                      ++.|.| +|.+|+ +.++.+... +.+++.+ ++++    +......+.+.-+......  .+|   ++++++  ++|+|
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~----~~a~~~~~~~~i~~~~~~~--~~d---~~ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNA----EKAKIVAAEYGVDPRKIYD--YSN---FDKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCH----HHHHHHHHHTTCCGGGEEC--SSS---GGGGGGCTTCCEE
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCH----HHHHHHHHhhccccccccc--cCc---hhhhcccccceee
Confidence            688998 589996 566666554 5777755 5554    1222222221111111111  222   344454  58988


Q ss_pred             EEeCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           80 ICTISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        80 i~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +.+.++..                   ....+......+.+.+.+.+
T Consensus       105 ~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~  151 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN  151 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred             eeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcC
Confidence            88766431                   12346777788888888877

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.98  E-value=0.24  Score=29.01  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=31.1

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL   40 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~   40 (124)
                      ++.+|++.|-.+.+...++..+..-|.++++..-..-.+
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~   41 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEP   41 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCC
Confidence            578999999878888888888888899988876654333

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=92.72  E-value=0.78  Score=30.45  Aligned_cols=82  Identities=12%  Similarity=0.142  Sum_probs=51.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH---HHHHHhcccCEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---SLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~d~v   79 (124)
                      +.+|+=.+ ...-|-.-.+.|++.|.+|+=+.+...+...-.........+.+...+..|+.+++   .+.++++++|+|
T Consensus        11 GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aDv~   89 (402)
T d1xk7a1          11 GLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIF   89 (402)
T ss_dssp             TCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCSEE
T ss_pred             CCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcCCc
Confidence            34555444 23446666678889999999987543221111101111122466789999998874   677788899999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      |.|..+
T Consensus        90 i~n~rp   95 (402)
T d1xk7a1          90 IEASKG   95 (402)
T ss_dssp             EEECSS
T ss_pred             eeeecc
Confidence            998754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=92.70  E-value=0.082  Score=35.04  Aligned_cols=33  Identities=33%  Similarity=0.437  Sum_probs=24.6

Q ss_pred             ceEEEEcc------CChhc---HHHHHHHhhCCCeEEEEeCC
Q 033236            4 SKVLVVGG------TGYIG---RRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         4 ~~ili~Ga------~g~iG---~~l~~~l~~~g~~v~~~~r~   36 (124)
                      |||++++.      +||+|   ..++++|.+.|++|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            67777663      46766   45688899999999988743

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.68  E-value=0.7  Score=30.18  Aligned_cols=91  Identities=10%  Similarity=0.031  Sum_probs=55.1

Q ss_pred             hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHhcccCEEEEeCcccccee
Q 033236           14 YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAVKRVDVVICTISGVHFRS   90 (124)
Q Consensus        14 ~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~d~vi~~a~~~~~~~   90 (124)
                      --|-...+.|++.|.+|+=+.+........     -...+.+-..+..|+.++   +.+.++++++|++|.|..+.....
T Consensus        16 ~agp~~~~~lad~GA~VikvE~p~~~~~~~-----~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~n~~pg~~~~   90 (359)
T d1x74a1          16 GPGPHAAMILGDLGADVVRIDRPSSVDGIS-----RDAMLRNRRIVTADLKSDQGLELALKLIAKADVLIEGYRPGVTER   90 (359)
T ss_dssp             THHHHHHHHHHHTTCEEEEEECC-----CC-----CCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEEECSCTTHHHH
T ss_pred             hHHHHHHHHHHHhCCEEEEECCCCCCCchh-----hhhhhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEEecCCCCchhh
Confidence            335555677788999999887653211000     011245678999999887   467777889999999987532111


Q ss_pred             cchHHHHHHHHHHHHhCCccEEEEec
Q 033236           91 HNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      -.     --.+.+.+.+  .++||+|
T Consensus        91 lg-----l~~~~l~~~n--P~lI~~s  109 (359)
T d1x74a1          91 LG-----LGPEECAKVN--DRLIYAR  109 (359)
T ss_dssp             HT-----CSHHHHHHHC--TTCEEEE
T ss_pred             cC-----CCHHHHHhhc--CCceEEE
Confidence            00     1233455666  4666666

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=92.56  E-value=0.41  Score=28.45  Aligned_cols=102  Identities=23%  Similarity=0.269  Sum_probs=54.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc------CCeE------------EEEccc
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK------QGAH------------LIEASF   63 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~------------~~~~D~   63 (124)
                      +++.|-| -|-||+.+.+.+++.+  .++-++..+... +.+....+-.+.+      ..+.            +.-..-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~-~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~   79 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLG-DPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN   79 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSS-CHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCC-ChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec
Confidence            5788888 5999999999998643  334333333322 2333333322211      1111            111111


Q ss_pred             CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        64 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+|+++.----++|+|+=|.|....        ..-++.-.+.| +++++.+.
T Consensus        80 ~~p~~i~W~~~gvDiViEcTG~f~~--------~~~a~~hl~~G-akkViiSA  123 (173)
T d1obfo1          80 RNPAQLPWGALKVDVVLECTGFFTT--------KEKAGAHIKGG-AKKVIISA  123 (173)
T ss_dssp             SCGGGSCTTTTTCSEEEECSSSCCS--------HHHHHHHHHHT-CSEEEESS
T ss_pred             CCHHHCcccccccceEEEecccccC--------HHHHHHHhccC-CcceEEec
Confidence            2344443333468999999995431        22333334568 78888876

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.54  E-value=0.16  Score=31.06  Aligned_cols=76  Identities=11%  Similarity=0.134  Sum_probs=41.8

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +.+++=.| |+|.+...+++.+...+++|++++.++.-.+.++ ++.... ....++....|..+.+     .++.|+++
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~-~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~i~  113 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCR-QHIAAYHSEIPVEILCNDIRHVE-----IKNASMVI  113 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHH-HHHHTSCCSSCEEEECSCTTTCC-----CCSEEEEE
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHH-HHhHhhcccchhhhccchhhccc-----cccceeeE
Confidence            34678777 4455555566555557899999999872111111 111111 2345677777765432     23456665


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      .+..
T Consensus       114 ~~~~  117 (225)
T d1im8a_         114 LNFT  117 (225)
T ss_dssp             EESC
T ss_pred             Eeee
Confidence            5443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.089  Score=33.82  Aligned_cols=33  Identities=27%  Similarity=0.417  Sum_probs=22.7

Q ss_pred             ceEEEEcc-CChh---cHHHHHHHhhCCCeEEEEeCC
Q 033236            4 SKVLVVGG-TGYI---GRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         4 ~~ili~Ga-~g~i---G~~l~~~l~~~g~~v~~~~r~   36 (124)
                      |+|+|+++ +|+.   +.+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777653 3333   445788898999999887644

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=92.43  E-value=0.08  Score=34.23  Aligned_cols=36  Identities=36%  Similarity=0.462  Sum_probs=30.2

Q ss_pred             CCCc--eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKS--KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~--~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+.+  .++|.|+ |..|...+.+++++|.+|+++.+.+
T Consensus         1 m~~~~~DVvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           1 MKVQYCDSLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             CCEEECSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             CCceecCEEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            4444  3899985 9999999999999999999998765

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.34  E-value=0.49  Score=27.62  Aligned_cols=87  Identities=17%  Similarity=0.096  Sum_probs=47.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV   78 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   78 (124)
                      .+++.|.|. |.+|+..++.+.+..  ..+.+.+......       ..  .......     .   +++++++  ++|+
T Consensus         7 k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~-----~---~~~e~l~~~~iD~   68 (172)
T d1lc0a1           7 KFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------LG--SLDEVRQ-----I---SLEDALRSQEIDV   68 (172)
T ss_dssp             SEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------CC--EETTEEB-----C---CHHHHHHCSSEEE
T ss_pred             CcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHH-------HH--HhhccCc-----C---CHHHHHhCCCcch
Confidence            357899984 999999888876542  2333333222100       00  0011111     1   2344443  5787


Q ss_pred             EEEeCcccc-------------------ceecchHHHHHHHHHHHHhC
Q 033236           79 VICTISGVH-------------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        79 vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |+.+.++..                   ....+......+++.+.+.+
T Consensus        69 V~I~tp~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~  116 (172)
T d1lc0a1          69 AYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKG  116 (172)
T ss_dssp             EEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTT
T ss_pred             hhhcccccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcC
Confidence            777665331                   12356777888888888887

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.29  Score=30.20  Aligned_cols=80  Identities=18%  Similarity=0.142  Sum_probs=47.7

Q ss_pred             CCceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHh-----c
Q 033236            2 GKSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAV-----K   74 (124)
Q Consensus         2 ~~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~-----~   74 (124)
                      ..++++=+| ++|+-..++++.+.+.| +|+.++.++.....+ .+..+.. ...+++++.+|..+  .+.+++     .
T Consensus        59 ~~k~vLEiGt~~GyStl~~a~al~~~g-~i~tie~~~~~~~~A-~~~~~~ag~~~~i~~~~Gda~e--~l~~~~~~~~~~  134 (219)
T d2avda1          59 QAKKALDLGTFTGYSALALALALPADG-RVVTCEVDAQPPELG-RPLWRQAEAEHKIDLRLKPALE--TLDELLAAGEAG  134 (219)
T ss_dssp             TCCEEEEECCTTSHHHHHHHTTSCTTC-EEEEEESCSHHHHHH-HHHHHHTTCTTTEEEEESCHHH--HHHHHHHTTCTT
T ss_pred             CCCeEEEEechhhHHHHHHHHhCCCCc-eEEEEeechhHHHHH-HHHHHhcCccceEEEEEeehhh--cchhhhhhcccC
Confidence            357888888 56777777777775544 899999887222111 1222211 24568888888733  333332     2


Q ss_pred             ccCEEEEeCcc
Q 033236           75 RVDVVICTISG   85 (124)
Q Consensus        75 ~~d~vi~~a~~   85 (124)
                      ..|.|+.-+..
T Consensus       135 ~fD~ifiD~dk  145 (219)
T d2avda1         135 TFDVAVVDADK  145 (219)
T ss_dssp             CEEEEEECSCS
T ss_pred             CccEEEEeCCH
Confidence            47777776653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.18  E-value=0.11  Score=31.49  Aligned_cols=32  Identities=16%  Similarity=0.371  Sum_probs=28.7

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|| |..|...+..+.+.|.+|.++.+.+
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            3789986 9999999999999999999998865

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.97  E-value=0.17  Score=30.82  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=28.3

Q ss_pred             ceEEEEccCChhcHHH-----HHHHhhCCCeEEEEeCCCC
Q 033236            4 SKVLVVGGTGYIGRRI-----VKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l-----~~~l~~~g~~v~~~~r~~~   38 (124)
                      |.|.|+++-|++|+-.     +..|++.|++|.+++-++.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            6688999999999754     5567788999999987754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=91.90  E-value=0.088  Score=33.96  Aligned_cols=32  Identities=19%  Similarity=0.323  Sum_probs=27.9

Q ss_pred             eEEEEccCChhcHHHHHHHh-----hCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASL-----AQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~-----~~g~~v~~~~r~~   37 (124)
                      .|+|.|| |-.|..++..|+     +.|++|+++.|.+
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            4899996 999999999996     4799999999876

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.88  E-value=0.7  Score=29.79  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=40.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHh----hhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQML----LSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      .++++|.|+.++   .+++++++..  .+|.++..++.=-+ ...+..    ..+.+++++++..|.  .+-+++.-++.
T Consensus        90 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~-~a~~~~~~~~~~~~d~rv~v~~~Da--~~~l~~~~~~y  163 (295)
T d1inla_          90 PKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIE-AARKYLKQTSCGFDDPRAEIVIANG--AEYVRKFKNEF  163 (295)
T ss_dssp             CCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHH-HHHHHCHHHHGGGGCTTEEEEESCH--HHHGGGCSSCE
T ss_pred             CceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHH-HHHHHHHhhcccccCCCcEEEhhhH--HHHHhcCCCCC
Confidence            468999996543   4466777653  68999988861100 001111    112456777777765  23333333346


Q ss_pred             CEEEEe
Q 033236           77 DVVICT   82 (124)
Q Consensus        77 d~vi~~   82 (124)
                      |+||.-
T Consensus       164 DvIi~D  169 (295)
T d1inla_         164 DVIIID  169 (295)
T ss_dssp             EEEEEE
T ss_pred             CEEEEc
Confidence            777654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.83  E-value=0.15  Score=30.51  Aligned_cols=74  Identities=12%  Similarity=0.089  Sum_probs=43.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++=.|. | .|.. +..|+++|++|++++.++...+..+ .......-.++++...|+.+..-    -+..|+|+..
T Consensus        31 ~grvLDiGc-G-~G~~-~~~la~~g~~v~gvD~s~~~l~~a~-~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~I~~~  102 (198)
T d2i6ga1          31 PGRTLDLGC-G-NGRN-SLYLAANGYDVTAWDKNPASMANLE-RIKAAEGLDNLQTDLVDLNTLTF----DGEYDFILST  102 (198)
T ss_dssp             SCEEEEETC-T-TSHH-HHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCTTEEEEECCTTTCCC----CCCEEEEEEE
T ss_pred             CCcEEEECC-C-CCHH-HHHHHHHhhhhccccCcHHHHHHHH-HHhhhccccchhhhheecccccc----cccccEEEEe
Confidence            346777773 3 6664 4677889999999998872211111 11111122457788888765431    1357888765


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      ..
T Consensus       103 ~~  104 (198)
T d2i6ga1         103 VV  104 (198)
T ss_dssp             SC
T ss_pred             ee
Confidence            54

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.81  E-value=0.31  Score=29.76  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=50.9

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++|+=.| |+|..-.++++.. ..| +|++++.++     ...+.+...  ...++..+..|..+++.....++.+|++
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~-----~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v  129 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSA-----KPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLI  129 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCH-----HHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCH-----HHHHHHHHHhhccCCceEEEeeccCccccccccceEEEE
Confidence            46788788 4466556665543 455 899999987     222222111  2358999999999998888888888888


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      ++...
T Consensus       130 ~~~~~  134 (209)
T d1nt2a_         130 YQDIA  134 (209)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            77543

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=91.76  E-value=0.098  Score=33.75  Aligned_cols=32  Identities=19%  Similarity=0.386  Sum_probs=28.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .|+|.|+ |..|...+..|++.|.+|+++.+.+
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899985 9999999999999999999998875

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=91.66  E-value=0.12  Score=32.72  Aligned_cols=32  Identities=19%  Similarity=0.261  Sum_probs=28.5

Q ss_pred             eEEEEccCChhcHHHHHHHhh-CCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLA-QGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~~r~~   37 (124)
                      .++|.|| |.-|...+..|++ .|++|.++.+.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            5899996 9999999999987 499999999875

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.66  E-value=0.68  Score=28.29  Aligned_cols=70  Identities=16%  Similarity=0.155  Sum_probs=44.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh---hccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS---FKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      ++++=.|+ | .|.. +..|++.|++|++++.++     ...+.+..   ....+++++.+|+.+.+    .-+..|.|+
T Consensus        43 ~~iLDiGc-G-tG~~-~~~l~~~~~~v~gvD~s~-----~mi~~a~~~~~~~~~~i~~~~~d~~~l~----~~~~fD~I~  110 (251)
T d1wzna1          43 RRVLDLAC-G-TGIP-TLELAERGYEVVGLDLHE-----EMLRVARRKAKERNLKIEFLQGDVLEIA----FKNEFDAVT  110 (251)
T ss_dssp             CEEEEETC-T-TCHH-HHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCCEEEESCGGGCC----CCSCEEEEE
T ss_pred             CEEEEeCC-C-CCcc-chhhcccceEEEEEeecc-----ccccccccccccccccchheehhhhhcc----cccccchHh
Confidence            46777773 3 3554 456888999999999886     22221111   12346899999986643    124588887


Q ss_pred             EeCcc
Q 033236           81 CTISG   85 (124)
Q Consensus        81 ~~a~~   85 (124)
                      ..-+.
T Consensus       111 ~~~~~  115 (251)
T d1wzna1         111 MFFST  115 (251)
T ss_dssp             ECSSG
T ss_pred             hhhhh
Confidence            76443

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.63  E-value=0.47  Score=30.87  Aligned_cols=69  Identities=16%  Similarity=0.116  Sum_probs=44.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++.|+| +|..++.-++.+... . .+|.+.+|++    +.............+.....   .    .++..++|+|+.
T Consensus       126 ~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~----e~~~~~~~~~~~~~~~~~~~---~----~~a~~~aDiV~t  193 (320)
T d1omoa_         126 SVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVRE----KAAKKFVSYCEDRGISASVQ---P----AEEASRCDVLVT  193 (320)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSH----HHHHHHHHHHHHTTCCEEEC---C----HHHHTSSSEEEE
T ss_pred             cEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCH----HHHHHHHHHHHhcCCccccc---h----hhhhccccEEEE
Confidence            5678887 699999999988753 3 6899999887    33333333333444443321   1    244567898877


Q ss_pred             eCc
Q 033236           82 TIS   84 (124)
Q Consensus        82 ~a~   84 (124)
                      +..
T Consensus       194 aT~  196 (320)
T d1omoa_         194 TTP  196 (320)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            653

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.63  E-value=0.11  Score=34.71  Aligned_cols=32  Identities=16%  Similarity=0.295  Sum_probs=28.2

Q ss_pred             eEEEEccCChhcHHHHHHHhh------CCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLA------QGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~------~g~~v~~~~r~~   37 (124)
                      .|+|.|| |--|...+..|++      +|.+|.++.|..
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            5899996 9999999988886      799999999886

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.60  E-value=0.53  Score=29.14  Aligned_cols=74  Identities=19%  Similarity=0.318  Sum_probs=48.0

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++|+=.| |+|..-.++++. ...| .|++++.++     ...+.+...  ...++..+..|..+++........+|.+
T Consensus        75 G~~VLDlGcGsG~~~~~la~~-~~~g-~V~aVDiS~-----~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i  147 (230)
T d1g8sa_          75 DSKILYLGASAGTTPSHVADI-ADKG-IVYAIEYAP-----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVI  147 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH-TTTS-EEEEEESCH-----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred             CCEEEEeCEEcCHHHHHHHHh-CCCC-EEEEEeCcH-----HHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEe
Confidence            56888888 557777777764 3444 899999987     222222221  2456788888988888776655556666


Q ss_pred             EEeC
Q 033236           80 ICTI   83 (124)
Q Consensus        80 i~~a   83 (124)
                      ++..
T Consensus       148 ~~~~  151 (230)
T d1g8sa_         148 YEDV  151 (230)
T ss_dssp             EECC
T ss_pred             eccc
Confidence            5543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.51  E-value=0.13  Score=31.26  Aligned_cols=35  Identities=31%  Similarity=0.433  Sum_probs=30.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .+|+|+|.| +|..|..++..+.+.+.+++.+.|++
T Consensus        31 ~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          31 SGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence            468999998 59999999999999999888887775

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.38  E-value=0.3  Score=28.41  Aligned_cols=78  Identities=17%  Similarity=0.177  Sum_probs=46.4

Q ss_pred             CCceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++++.+.| +.+.+-..++..+..-|.++++.+-..-.+........... ...+-.+     .-.++++++++++|+|
T Consensus         2 ~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~d~~~ai~~aDvi   76 (161)
T d1vlva2           2 KGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSV-----SFTSNLEEALAGADVV   76 (161)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEE-----EEESCHHHHHTTCSEE
T ss_pred             CCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCce-----EEEecHHHhhhhhhhe
Confidence            578999999 43578888888888899999887655433333322222111 1111111     1123477788888877


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +-...
T Consensus        77 yt~~~   81 (161)
T d1vlva2          77 YTDVW   81 (161)
T ss_dssp             EECCC
T ss_pred             eccce
Confidence            76543

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=91.38  E-value=0.1  Score=34.24  Aligned_cols=31  Identities=26%  Similarity=0.354  Sum_probs=27.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .++|.| +|.-|..++.+|.+.|.+|.++.+-
T Consensus         9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            378888 5999999999999999999999864

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.32  E-value=0.55  Score=32.75  Aligned_cols=69  Identities=12%  Similarity=0.133  Sum_probs=42.7

Q ss_pred             ceEEEEc-cCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc
Q 033236            4 SKVLVVG-GTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK   74 (124)
Q Consensus         4 ~~ili~G-a~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (124)
                      +++.|.| .+|.+|.+.++.+... +.+|+++.-...-. +-..+++......++..+.+|- +-|+++++++
T Consensus       151 ~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS-~iQ~~Qmtt~~~~Nv~~i~v~G-~fDDcq~~vk  221 (511)
T d1kl7a_         151 KQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRIS-PIQEEQMTTVPDENVQTLSVTG-TFDNCQDIVK  221 (511)
T ss_dssp             CCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSC-HHHHHHHHHCCCTTEEEEEESS-CHHHHHHHHH
T ss_pred             ceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCc-hHHHHHHhhcCCceEEEEEecc-ChHHHHHHHH
Confidence            4555555 5699999999999754 57888876543211 2333444455567887776653 4455554443

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.20  E-value=0.36  Score=26.69  Aligned_cols=57  Identities=16%  Similarity=0.186  Sum_probs=39.8

Q ss_pred             CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC
Q 033236            1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD   65 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   65 (124)
                      |++.+|+|.=-.-.+...+...|.+.|++|.......     +..+..   ......++-.|+.=
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~-----~a~~~l---~~~~~dlii~D~~m   57 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN-----EVLAAL---ASKTPDVLLSDIRM   57 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH-----HHHHHH---TTCCCSEEEECCSS
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH-----HHHHHH---HhCCCCEEEehhhc
Confidence            7777899998888888888888888899998755443     333333   34556677777653

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=91.17  E-value=0.31  Score=31.19  Aligned_cols=76  Identities=12%  Similarity=0.243  Sum_probs=47.1

Q ss_pred             ceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            4 SKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         4 ~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      .+++=.| |+|.+|..++...  ...+|++++.++...+. ..+-.....-.+++++.+|+.++-.    -.+.|+|+.|
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~-A~~Na~~~~~~~v~~~~~d~~~~~~----~~~fDlIvsN  182 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSL-AQRNAQHLAIKNIHILQSDWFSALA----GQQFAMIVSN  182 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHH-HHHHHHHHTCCSEEEECCSTTGGGT----TCCEEEEEEC
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhH-HHHHHHHhCcccceeeecccccccC----CCceeEEEec
Confidence            3566455 6788887776643  35799999988722111 1122222233579999999865421    1369999999


Q ss_pred             Cccc
Q 033236           83 ISGV   86 (124)
Q Consensus        83 a~~~   86 (124)
                      .++.
T Consensus       183 PPYi  186 (274)
T d2b3ta1         183 PPYI  186 (274)
T ss_dssp             CCCB
T ss_pred             chhh
Confidence            8754

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.03  E-value=0.18  Score=32.07  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=28.6

Q ss_pred             CceEEEEccCChhcHH-----HHHHHhhCCCeEEEEeCCCCC
Q 033236            3 KSKVLVVGGTGYIGRR-----IVKASLAQGHETYVLQRPDIG   39 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~-----l~~~l~~~g~~v~~~~r~~~~   39 (124)
                      +++|.|.| -|++|+-     ++..|++.|++|.+++-+++.
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ~   42 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA   42 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence            46678887 7888876     466688899999999988754

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.14  Score=30.70  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=25.0

Q ss_pred             ceEEEEccCChhcHH-----HHHHHhhCCCeEEEEe
Q 033236            4 SKVLVVGGTGYIGRR-----IVKASLAQGHETYVLQ   34 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~-----l~~~l~~~g~~v~~~~   34 (124)
                      |+++|+|...++|+-     ++..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999965588875     5567888999999986

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.66  E-value=0.096  Score=31.16  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=28.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++|.|| |..|..-+..+.+.|.+|+++.|.+
T Consensus         6 ~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           6 SKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            56999996 9999999999999999999997654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.59  E-value=0.52  Score=30.61  Aligned_cols=79  Identities=16%  Similarity=0.082  Sum_probs=43.5

Q ss_pred             CceEEEE-ccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCEEE
Q 033236            3 KSKVLVV-GGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~-Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi   80 (124)
                      +++++=. -++|+.+.+    ++..+.+|+.++.++...+..+ +......-.+++++.+|..+. +.+.+.-++.|.|+
T Consensus       146 g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~-~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi  220 (318)
T d1wxxa2         146 GERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAE-ENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVV  220 (318)
T ss_dssp             EEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHH-HHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHH-HHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEE
Confidence            4566633 344554443    3445679999999872211111 111111224688999988553 23334345699999


Q ss_pred             EeCccc
Q 033236           81 CTISGV   86 (124)
Q Consensus        81 ~~a~~~   86 (124)
                      ...+..
T Consensus       221 ~DpP~~  226 (318)
T d1wxxa2         221 LDPPAF  226 (318)
T ss_dssp             ECCCCS
T ss_pred             EcCCcc
Confidence            877543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.58  E-value=0.6  Score=28.08  Aligned_cols=73  Identities=15%  Similarity=0.251  Sum_probs=47.4

Q ss_pred             EEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-h--ccCCeEEEEcccCChHHHHHHh--cccCEEEEe
Q 033236            8 VVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-F--KKQGAHLIEASFADHRSLVEAV--KRVDVVICT   82 (124)
Q Consensus         8 i~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi~~   82 (124)
                      +|-|+|+...++++.+ . +.+|+++++++     ...+.... +  ...++.++.++..+.+.+.+-.  +.+|.|+.-
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~-----~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~D  102 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDS-----EVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD  102 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCH-----HHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechH-----HHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeec
Confidence            3445566666666655 2 46899999997     22222211 1  2457999999998877665553  568999888


Q ss_pred             Ccccc
Q 033236           83 ISGVH   87 (124)
Q Consensus        83 a~~~~   87 (124)
                      .|..+
T Consensus       103 lGvSs  107 (192)
T d1m6ya2         103 LGVST  107 (192)
T ss_dssp             CSCCH
T ss_pred             cchhH
Confidence            87643

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.57  E-value=0.14  Score=30.84  Aligned_cols=32  Identities=22%  Similarity=0.381  Sum_probs=28.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+ |..|...+..+.+.|.+|.++.+.+
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            4889996 9999999999999999999998764

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.19  E-value=1.2  Score=27.04  Aligned_cols=90  Identities=19%  Similarity=0.132  Sum_probs=51.5

Q ss_pred             EEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-----------c--------c
Q 033236            6 VLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-----------S--------F   63 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------D--------~   63 (124)
                      +-|.| -|+-|..++..+.+.+   .+.+++..+.     +...   ... ....+..+           |        .
T Consensus         4 IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~-----~~L~---~~~-~~~ki~iG~~~t~G~Gagg~p~~g~~aa~   73 (198)
T d1rq2a1           4 IKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDA-----QALL---MSD-ADVKLDVGRDSTRGLGAGADPEVGRKAAE   73 (198)
T ss_dssp             EEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCH-----HHHH---HCC-CSEEEECCTTTC-----CCCHHHHHHHHH
T ss_pred             EEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchH-----HHHh---cCC-cchhhccccccccCCCcCcChhhhHhhHH
Confidence            55677 4778999999999887   3455555443     2222   111 11222222           1        1


Q ss_pred             CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236           64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        64 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~  107 (124)
                      .+.+.+.+.+++.|.||-.||...-  .-.-+...+++.+++.+
T Consensus        74 e~~~~I~~~l~~~d~vfi~AGlGGg--TGtGaaPviA~iake~g  115 (198)
T d1rq2a1          74 DAKDEIEELLRGADMVFVTAGEGGG--TGTGGAPVVASIARKLG  115 (198)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETTSS--HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCEEEEEEecCCC--CCcchHHHHHHHHHHcC
Confidence            2456788888899999999974321  22233444555555555

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=90.17  E-value=0.82  Score=28.23  Aligned_cols=79  Identities=14%  Similarity=0.148  Sum_probs=48.7

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHh------c
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAV------K   74 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~------~   74 (124)
                      .++++=+| ++|+-..++++.+.+.| +|+.+..++...+. ..+..... ...+++++.+|.  .+.+.++.      .
T Consensus        60 ~k~iLEiGT~~GyStl~la~al~~~g-~v~tie~~~~~~~~-A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~~~~~~  135 (227)
T d1susa1          60 AKNTMEIGVYTGYSLLATALAIPEDG-KILAMDINKENYEL-GLPVIKKAGVDHKIDFREGPA--LPVLDEMIKDEKNHG  135 (227)
T ss_dssp             CCEEEEECCGGGHHHHHHHHHSCTTC-EEEEEESCCHHHHH-HHHHHHHTTCGGGEEEEESCH--HHHHHHHHHCGGGTT
T ss_pred             CCcEEEecchhhhhHHHHHhhCCCCc-EEEEEeccchhHHH-HHHHHHHhccccceeeeehHH--HHHHHHHHhccccCC
Confidence            46788888 55777777777775544 88888988722211 11112111 234688888886  44555543      2


Q ss_pred             ccCEEEEeCcc
Q 033236           75 RVDVVICTISG   85 (124)
Q Consensus        75 ~~d~vi~~a~~   85 (124)
                      ..|.|+.-+..
T Consensus       136 ~fD~iFiDa~k  146 (227)
T d1susa1         136 SYDFIFVDADK  146 (227)
T ss_dssp             CBSEEEECSCS
T ss_pred             ceeEEEeccch
Confidence            48888887754

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.073  Score=34.63  Aligned_cols=100  Identities=12%  Similarity=0.175  Sum_probs=51.6

Q ss_pred             ceEEEEccCChhcHHHHHHHh----hCC-------CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEE-cccCChHHHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASL----AQG-------HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE-ASFADHRSLVE   71 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~----~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~   71 (124)
                      .++++.|| |.-|..+++.+.    +.|       .+++++++..-=.+ ...+....   ....+.. .+-....++..
T Consensus        26 ~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~-~r~~~~~~---~k~~~a~~~~~~~~~~L~e  100 (294)
T d1pj3a1          26 HKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVK-GRKAKIDS---YQEPFTHSAPESIPDTFED  100 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBT-TCSSCCCT---TTGGGCBCCCSSCCSSHHH
T ss_pred             cEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccC-CCCcccHH---HHHHhhccccccchhHHHH
Confidence            47889986 777777777654    334       26888887530000 00000000   0000111 11122345777


Q ss_pred             Hhc--ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236           72 AVK--RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN  115 (124)
Q Consensus        72 ~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  115 (124)
                      +++  +.|+++-+.+....+      ++.+++.+.+.+ -+.+||-
T Consensus       101 ~i~~~kptvliG~S~~~g~f------t~evi~~Ma~~~-~~PIIFa  139 (294)
T d1pj3a1         101 AVNILKPSTIIGVAGAGRLF------TPDVIRAMASIN-ERPVIFA  139 (294)
T ss_dssp             HHHHHCCSEEEECCCSSCCS------CHHHHHHHHHHC-SSCEEEE
T ss_pred             HHHhcCCceEEEecCCCCcC------CHHHHHHHHhcC-CCcEEEE
Confidence            766  788888888754333      355666666655 3555553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.91  E-value=0.52  Score=28.20  Aligned_cols=70  Identities=19%  Similarity=0.115  Sum_probs=42.0

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh---hccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS---FKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      .+|+=.|.+  .|. ++..|++.|++|++++.++     ...+....   .....+..+.+|..+..   .--+..|+|+
T Consensus        39 ~~ILDiGcG--~G~-~~~~la~~~~~v~giD~S~-----~~i~~ak~~~~~~~~~~~~~~~d~~~l~---~~~~~fD~I~  107 (226)
T d1ve3a1          39 GKVLDLACG--VGG-FSFLLEDYGFEVVGVDISE-----DMIRKAREYAKSRESNVEFIVGDARKLS---FEDKTFDYVI  107 (226)
T ss_dssp             CEEEEETCT--TSH-HHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCCEEEECCTTSCC---SCTTCEEEEE
T ss_pred             CEEEEECCC--cch-hhhhHhhhhcccccccccc-----cchhhhhhhhcccccccccccccccccc---ccCcCceEEE
Confidence            467877733  244 3456778899999999886     22211111   12355778888876632   1113578888


Q ss_pred             EeCc
Q 033236           81 CTIS   84 (124)
Q Consensus        81 ~~a~   84 (124)
                      ....
T Consensus       108 ~~~~  111 (226)
T d1ve3a1         108 FIDS  111 (226)
T ss_dssp             EESC
T ss_pred             Eecc
Confidence            7654

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.82  E-value=0.92  Score=28.31  Aligned_cols=77  Identities=9%  Similarity=0.006  Sum_probs=43.1

Q ss_pred             EEEEc--cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            6 VLVVG--GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         6 ili~G--a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      +++.|  -+|+=|-.+++.|.+.|++|.++....+...+.............+.....+-.+.... ....+.|++|-+.
T Consensus        59 lil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~iVDal  137 (243)
T d1jzta_          59 FVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEY-LKPEKTLCIVDAI  137 (243)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEECSSTTCGGGG-GSTTTEEEEEEES
T ss_pred             EEEECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHHCCCceecccccchhhc-cccccccEEEEee
Confidence            34554  45777888999999999998877655433333333333333334444444433222211 1234567777754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=89.78  E-value=0.15  Score=32.88  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=28.8

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .|+|.|+ |..|...+.++++.|.+|+++.+.+
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899985 9999999999999999999998765

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=89.53  E-value=0.26  Score=28.71  Aligned_cols=31  Identities=29%  Similarity=0.354  Sum_probs=27.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .++|.|| |..|...+..+.+.|.++.++.+.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            4789986 999999999999999999999865

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.52  E-value=0.16  Score=30.23  Aligned_cols=33  Identities=9%  Similarity=0.149  Sum_probs=28.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .++++|.|| |..|..-+..+.+.|.+++++.+.
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            357999996 999999999999999999998754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=89.34  E-value=0.78  Score=27.82  Aligned_cols=68  Identities=16%  Similarity=0.272  Sum_probs=42.4

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++|+=.|.  +.|.. +..|++.|++|++++.++     ...+..+.....++.++.+|..+..    .-+..|+|+..
T Consensus        21 ~~~VLDiGc--G~G~~-~~~l~~~g~~v~giD~s~-----~~i~~a~~~~~~~~~~~~~~~~~~~----~~~~fD~I~~~   88 (225)
T d2p7ia1          21 PGNLLELGS--FKGDF-TSRLQEHFNDITCVEASE-----EAISHAQGRLKDGITYIHSRFEDAQ----LPRRYDNIVLT   88 (225)
T ss_dssp             SSCEEEESC--TTSHH-HHHHTTTCSCEEEEESCH-----HHHHHHHHHSCSCEEEEESCGGGCC----CSSCEEEEEEE
T ss_pred             CCcEEEEeC--CCcHH-HHHHHHcCCeEEEEeCcH-----HHhhhhhcccccccccccccccccc----ccccccccccc
Confidence            456776763  33554 467788899999999886     3333333323456888888876543    12347777654

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.32  E-value=0.99  Score=25.01  Aligned_cols=36  Identities=25%  Similarity=0.250  Sum_probs=30.6

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      .+++++|.|+ |..+-.-+..|.+-..+|+++.|.+.
T Consensus        26 ~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          26 RNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             TTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            3688999996 88888888899888899999998763

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.06  E-value=0.56  Score=24.77  Aligned_cols=33  Identities=24%  Similarity=0.174  Sum_probs=26.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+|+|.| +|+=-.+++..|.+...++++.--++
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~   33 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNA   33 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCc
Confidence            6899999 47778889999998888988875443

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.74  E-value=0.085  Score=31.76  Aligned_cols=66  Identities=21%  Similarity=0.239  Sum_probs=46.2

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +|+|.|.| -|..|.+=+..|.+.|.+|++--|..+.    ..++.   ...+++.        -++.++.+..|+|..+
T Consensus        16 ~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~----s~~~A---~~~Gf~v--------~~~~eA~~~aDiim~L   79 (182)
T d1np3a2          16 GKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSA----TVAKA---EAHGLKV--------ADVKTAVAAADVVMIL   79 (182)
T ss_dssp             TSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCH----HHHHH---HHTTCEE--------ECHHHHHHTCSEEEEC
T ss_pred             CCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCc----cHHHH---hhhcccc--------ccHHHHhhhcCeeeee
Confidence            68899998 5899999999999999999887776521    11111   1233433        3466677778877777


Q ss_pred             Cc
Q 033236           83 IS   84 (124)
Q Consensus        83 a~   84 (124)
                      .+
T Consensus        80 ~P   81 (182)
T d1np3a2          80 TP   81 (182)
T ss_dssp             SC
T ss_pred             cc
Confidence            65

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.54  E-value=0.35  Score=29.05  Aligned_cols=32  Identities=25%  Similarity=0.381  Sum_probs=28.3

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |..|...+..+.+.|.+|.++.+..
T Consensus         5 DviIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           5 DYLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            4788886 9999999999999999999998764

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=88.37  E-value=0.34  Score=32.83  Aligned_cols=23  Identities=30%  Similarity=0.213  Sum_probs=18.6

Q ss_pred             CChhc---HHHHHHHhhCCCeEEEEe
Q 033236           12 TGYIG---RRIVKASLAQGHETYVLQ   34 (124)
Q Consensus        12 ~g~iG---~~l~~~l~~~g~~v~~~~   34 (124)
                      +|++|   .+|+++|.++|++|.+++
T Consensus        16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_          16 TGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            47766   556888999999999985

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.21  E-value=0.63  Score=28.30  Aligned_cols=80  Identities=11%  Similarity=0.059  Sum_probs=44.9

Q ss_pred             CceEEEEccC-ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236            3 KSKVLVVGGT-GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC   81 (124)
Q Consensus         3 ~~~ili~Ga~-g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   81 (124)
                      +++|+-.|+. |+....++ .+...+..|+.++.++.-.+ ...+..+.....++.++.+|..+.-   ..-...|+|+.
T Consensus        76 g~~VLdiG~GtG~~s~~la-~~~~~~g~V~~id~~~~~~~-~a~~~~~~~~~~n~~~~~~d~~~~~---~~~~~fD~I~~  150 (213)
T d1dl5a1          76 GMRVLEIGGGTGYNAAVMS-RVVGEKGLVVSVEYSRKICE-IAKRNVERLGIENVIFVCGDGYYGV---PEFSPYDVIFV  150 (213)
T ss_dssp             TCEEEEECCTTSHHHHHHH-HHHCTTCEEEEEESCHHHHH-HHHHHHHHTTCCSEEEEESCGGGCC---GGGCCEEEEEE
T ss_pred             cceEEEecCccchhHHHHH-HHhCCCCcEEEeecchhhHH-HhhhhHhhhcccccccccCchHHcc---ccccchhhhhh
Confidence            5689988843 44444343 34444558999998862221 1122223334467788888764321   11235898888


Q ss_pred             eCcccc
Q 033236           82 TISGVH   87 (124)
Q Consensus        82 ~a~~~~   87 (124)
                      .++..+
T Consensus       151 ~~~~~~  156 (213)
T d1dl5a1         151 TVGVDE  156 (213)
T ss_dssp             CSBBSC
T ss_pred             hccHHH
Confidence            776433

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=88.20  E-value=0.26  Score=32.39  Aligned_cols=32  Identities=22%  Similarity=0.319  Sum_probs=27.6

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |.-|.-++.+|++.|.+|.++-+-+
T Consensus         4 D~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           4 DYIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            4788884 8999999999999999999997663

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.15  E-value=0.25  Score=29.86  Aligned_cols=32  Identities=22%  Similarity=0.290  Sum_probs=28.7

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+ |..|...+..+.+.|.+|.++.+.+
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~~   38 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQA   38 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            5899985 9999999999999999999998764

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.12  E-value=0.37  Score=29.05  Aligned_cols=32  Identities=22%  Similarity=0.403  Sum_probs=28.4

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |--|...+..+++.|.+|.++.+.+
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            3789986 9999999999999999999998764

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=1.6  Score=25.64  Aligned_cols=100  Identities=22%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhcc------CCeEE------------EEcccC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKK------QGAHL------------IEASFA   64 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~~------------~~~D~~   64 (124)
                      +++.|-| -|-||+.+.+.+.++. .++.++....   +.+....+-...+      ..+++            --..-.
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~---~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~   77 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLL---DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAER   77 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSS---CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCC---CHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCC
Confidence            5688888 5999999999998875 5666554322   1233322222211      11211            011112


Q ss_pred             ChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        65 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +++++.=--.++|+|+=|.|....        ..-++.-.+.| +++++.+.
T Consensus        78 ~p~~i~W~~~gvDiViEcTG~f~t--------~~~~~~hl~~g-akkViiSa  120 (166)
T d1gado1          78 DPANLKWDEVGVDVVAEATGLFLT--------DETARKHITAG-AKKVVMTG  120 (166)
T ss_dssp             SGGGGCHHHHTCSEEEECSSSCCS--------HHHHTHHHHTT-CSEEEESS
T ss_pred             ChHHCCccccCCCEEEEccccccC--------HHHHHHHhcCC-CceEEeec
Confidence            344333223368999999995432        23333444567 78888765

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=87.83  E-value=2.4  Score=28.02  Aligned_cols=104  Identities=13%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH---------HHhhhhccCCeEEEEcccCChH---HHHH
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL---------QMLLSFKKQGAHLIEASFADHR---SLVE   71 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~D~~~~~---~~~~   71 (124)
                      -+|+=.+ ...-|-...+.|++.|.+|+-+.+...+. ..+.         ...-...+.+-..+..|+.+++   .+.+
T Consensus         8 irVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~   85 (417)
T d1q7ea_           8 IKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGD-VTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEK   85 (417)
T ss_dssp             CEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCC-GGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCC-chhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHH
Confidence            3444333 23345555677888999999998542110 0000         0000112456789999998874   5667


Q ss_pred             HhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           72 AVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        72 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      +++++|++|.|-.+.....-.+     -.+.+.+.+  .++||+|
T Consensus        86 Li~~aDv~i~n~~pg~~~rlGl-----~~~~l~~~n--P~lI~~s  123 (417)
T d1q7ea_          86 LIREADILVENFHPGAIDHMGF-----TWEHIQEIN--PRLIFGS  123 (417)
T ss_dssp             HHHHCSEEEECCCC-------C-----CHHHHHHHC--TTCEEEE
T ss_pred             HHhcCcccEeccCCCcHhhcCC-----CHHHHHhhC--CCEEEEe
Confidence            8889999999976543211111     123445565  4677776

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.63  E-value=1.5  Score=26.38  Aligned_cols=68  Identities=16%  Similarity=0.203  Sum_probs=43.1

Q ss_pred             CCceEEEEcc-CChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGG-TGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga-~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++++|+=.|+ +|.++    -.++..| .+|++++.++     ...+.... ...+++++.+|+.+.+      .+.|.|
T Consensus        48 ~Gk~VLDlGcGtG~l~----i~a~~~ga~~V~~vDid~-----~a~~~ar~-N~~~~~~~~~D~~~l~------~~fD~V  111 (197)
T d1ne2a_          48 GGRSVIDAGTGNGILA----CGSYLLGAESVTAFDIDP-----DAIETAKR-NCGGVNFMVADVSEIS------GKYDTW  111 (197)
T ss_dssp             BTSEEEEETCTTCHHH----HHHHHTTBSEEEEEESCH-----HHHHHHHH-HCTTSEEEECCGGGCC------CCEEEE
T ss_pred             CCCEEEEeCCCCcHHH----HHHHHcCCCcccccccCH-----HHHHHHHH-ccccccEEEEehhhcC------CcceEE
Confidence            4678887773 33332    3455566 5799999886     33332222 2456889999986532      468999


Q ss_pred             EEeCcc
Q 033236           80 ICTISG   85 (124)
Q Consensus        80 i~~a~~   85 (124)
                      |.|.+.
T Consensus       112 i~NPPf  117 (197)
T d1ne2a_         112 IMNPPF  117 (197)
T ss_dssp             EECCCC
T ss_pred             EeCccc
Confidence            988653

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.47  E-value=2.2  Score=26.91  Aligned_cols=95  Identities=17%  Similarity=0.201  Sum_probs=49.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++||=+|. | .|. ++..+++. |.+|++++.++...+.. .++..... ...+.....|..+.      -...|.|+
T Consensus        53 g~~VLDiGC-G-~G~-~a~~~a~~~g~~v~gi~ls~~q~~~a-~~~~~~~~l~~~~~~~~~d~~~~------~~~fD~i~  122 (280)
T d2fk8a1          53 GMTLLDIGC-G-WGT-TMRRAVERFDVNVIGLTLSKNQHARC-EQVLASIDTNRSRQVLLQGWEDF------AEPVDRIV  122 (280)
T ss_dssp             TCEEEEESC-T-TSH-HHHHHHHHHCCEEEEEESCHHHHHHH-HHHHHTSCCSSCEEEEESCGGGC------CCCCSEEE
T ss_pred             CCEEEEecC-C-chH-HHHHHHHhCceeEEEecchHHHHHHH-HHHHHhhccccchhhhhhhhhhh------ccchhhhh
Confidence            567888873 3 233 34445544 89999999987221111 11111111 23456666665433      24588888


Q ss_pred             EeCccccceecchHHHHH-HHHHHHHhC
Q 033236           81 CTISGVHFRSHNILMQLK-LVDAIREAG  107 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~  107 (124)
                      ..--..+....|.....+ +.+.+++-|
T Consensus       123 si~~~eh~~~~~~~~~f~~i~~~LkpgG  150 (280)
T d2fk8a1         123 SIEAFEHFGHENYDDFFKRCFNIMPADG  150 (280)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTC
T ss_pred             HhhHHHHhhhhhHHHHHHHHHhccCCCc
Confidence            766554544455544433 333333333

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.45  E-value=0.18  Score=29.17  Aligned_cols=26  Identities=27%  Similarity=0.312  Sum_probs=23.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHE   29 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~   29 (124)
                      +++++|.|| |.+|..++..+.+.|.+
T Consensus        29 gkrVvVIGg-G~~g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          29 GNKVAIIGC-GGIGFDTAMYLSQPGES   54 (162)
T ss_dssp             CSEEEEECC-HHHHHHHHHHHTCCSSC
T ss_pred             CCceEEEcC-chhHHHHHHHHHHcCCc
Confidence            578999996 99999999999998854

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.43  E-value=0.45  Score=28.44  Aligned_cols=33  Identities=21%  Similarity=0.346  Sum_probs=28.8

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ..++|.|+ |..|...+..+.+.|.+|.++.+..
T Consensus         4 ~DviVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           4 TETLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            35889985 9999999999999999999998765

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.40  E-value=0.41  Score=29.02  Aligned_cols=33  Identities=15%  Similarity=0.284  Sum_probs=26.4

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~   37 (124)
                      .+++|.|| |+.|..++..|.+.+  .+|+++++.+
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            35788885 999999999998876  4688887653

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=87.34  E-value=0.11  Score=33.99  Aligned_cols=33  Identities=21%  Similarity=0.417  Sum_probs=23.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhh----CC-------CeEEEEeCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLA----QG-------HETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~----~g-------~~v~~~~r~   36 (124)
                      ..++++.|+ |.-|..+++.|..    .|       .+++++++.
T Consensus        25 d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~   68 (308)
T d1o0sa1          25 QEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDID   68 (308)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETT
T ss_pred             HcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCC
Confidence            357899986 7778887777654    34       268888876

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=87.19  E-value=0.65  Score=29.80  Aligned_cols=32  Identities=13%  Similarity=0.046  Sum_probs=22.6

Q ss_pred             ceEEEEc-cCCh---hcHHHHHHHhhCCCeEEEEeC
Q 033236            4 SKVLVVG-GTGY---IGRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         4 ~~ili~G-a~g~---iG~~l~~~l~~~g~~v~~~~r   35 (124)
                      |+|++++ |+++   =..+++++|.++||+|+.++.
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            5677775 3321   234588999999999998874

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=86.65  E-value=2.2  Score=27.54  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=43.3

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhh-----hhccCCeEEEEcccCChHHHHHHhcc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLL-----SFKKQGAHLIEASFADHRSLVEAVKR   75 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (124)
                      .++++|.|+.+  | .+++++++.  ..+|.++..++.=-+ ...+...     .+.+++++++.+|.  .+-+++.-++
T Consensus        78 pk~VLiiG~G~--G-~~~~~ll~~~~~~~v~~VEiD~~Vi~-~a~~~f~~~~~~~~~d~rv~i~~~Da--~~~l~~~~~~  151 (312)
T d1uira_          78 PKRVLIVGGGE--G-ATLREVLKHPTVEKAVMVDIDGELVE-VAKRHMPEWHQGAFDDPRAVLVIDDA--RAYLERTEER  151 (312)
T ss_dssp             CCEEEEEECTT--S-HHHHHHTTSTTCCEEEEEESCHHHHH-HHHHHCHHHHTTGGGCTTEEEEESCH--HHHHHHCCCC
T ss_pred             cceEEEeCCCc--h-HHHHHHHhcCCcceEEEecCCHHHHH-HHHhcCcccccCccCCCceEEEEchH--HHHhhhcCCc
Confidence            46899999643  3 334555554  368999998861000 0111111     22456788888886  3444554456


Q ss_pred             cCEEEEeC
Q 033236           76 VDVVICTI   83 (124)
Q Consensus        76 ~d~vi~~a   83 (124)
                      .|+||.-.
T Consensus       152 yDvIi~D~  159 (312)
T d1uira_         152 YDVVIIDL  159 (312)
T ss_dssp             EEEEEEEC
T ss_pred             ccEEEEeC
Confidence            88888644

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.56  E-value=1.6  Score=24.16  Aligned_cols=35  Identities=20%  Similarity=0.202  Sum_probs=28.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +|+++|.|+ |.-+..-+..|.+-..+|+++.|.+.
T Consensus        30 gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          30 GKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             CceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            688999996 77777777788888889999988763

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.46  E-value=0.8  Score=27.65  Aligned_cols=76  Identities=18%  Similarity=0.023  Sum_probs=41.5

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI   83 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   83 (124)
                      .+++=.|  .+.|......+.+.+.+|++++-++.-.+. ..+........+++++.+|+.+..   ..-+..|+|+...
T Consensus        62 ~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~-ak~~~~~~~~~~~~f~~~d~~~~~---~~~~~fD~I~~~~  135 (222)
T d2ex4a1          62 SCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQ-AKTYLGEEGKRVRNYFCCGLQDFT---PEPDSYDVIWIQW  135 (222)
T ss_dssp             SEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHH-HHHHTGGGGGGEEEEEECCGGGCC---CCSSCEEEEEEES
T ss_pred             CEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhc-cccccccccccccccccccccccc---ccccccccccccc
Confidence            4577777  345664433344456789999887611111 111122222345789999986642   1123578887765


Q ss_pred             cc
Q 033236           84 SG   85 (124)
Q Consensus        84 ~~   85 (124)
                      ..
T Consensus       136 ~l  137 (222)
T d2ex4a1         136 VI  137 (222)
T ss_dssp             CG
T ss_pred             cc
Confidence            43

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.13  E-value=0.56  Score=28.42  Aligned_cols=32  Identities=28%  Similarity=0.416  Sum_probs=28.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |--|...+..+.+.|.+|.++.+.+
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4788885 9999999999999999999998765

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.99  E-value=0.49  Score=28.66  Aligned_cols=32  Identities=22%  Similarity=0.344  Sum_probs=28.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+ |--|...+.++++.|.+|.++.+.+
T Consensus         5 DviVIG~-GpaGl~aA~~aa~~G~kV~viE~~~   36 (235)
T d1h6va1           5 DLIIIGG-GSGGLAAAKEAAKFDKKVMVLDFVT   36 (235)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGCCCEEEECCCC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4788985 8899999999999999999998665

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.93  E-value=0.67  Score=28.68  Aligned_cols=34  Identities=35%  Similarity=0.413  Sum_probs=28.8

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~   36 (124)
                      ...++++.|| |.-|..+++.+.+.+ .+++.++|.
T Consensus        25 ~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          25 EEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             hhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            3568999986 889999999999888 688888877

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.76  E-value=2.1  Score=27.11  Aligned_cols=76  Identities=14%  Similarity=0.234  Sum_probs=42.2

Q ss_pred             eEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            5 KVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         5 ~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++-.| |+|.++..+++   ....+|++++.++...+-++ +-.+... ..++.+..+|+.++-  .....++|+||.|
T Consensus       113 ~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~-~Na~~~~~~~~~~i~~~~~~~~~--~~~~~~fDlIVsN  186 (271)
T d1nv8a_         113 TVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIAR-KNAERHGVSDRFFVRKGEFLEPF--KEKFASIEMILSN  186 (271)
T ss_dssp             EEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHH-HHHHHTTCTTSEEEEESSTTGGG--GGGTTTCCEEEEC
T ss_pred             EEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHH-HHHHHcCCCceeEEeeccccccc--ccccCcccEEEEc
Confidence            444333 44555555432   35678999999872211111 1111111 235678888886542  2334568999999


Q ss_pred             Cccc
Q 033236           83 ISGV   86 (124)
Q Consensus        83 a~~~   86 (124)
                      .++.
T Consensus       187 PPYI  190 (271)
T d1nv8a_         187 PPYV  190 (271)
T ss_dssp             CCCB
T ss_pred             cccc
Confidence            8755

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=85.64  E-value=0.46  Score=28.49  Aligned_cols=33  Identities=12%  Similarity=0.155  Sum_probs=25.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      .|+++|.|| |+.|+.+...+.+.++++..+..+
T Consensus         2 ~kkl~i~Ga-gg~~~~v~di~~~~~~~~~~f~dd   34 (193)
T d3bswa1           2 TEKIYIYGA-SGHGLVCEDVAKNMGYKECIFLDD   34 (193)
T ss_dssp             CSEEEEEC---CHHHHHHHHHHHHTCCEEEECCC
T ss_pred             CCEEEEEcC-CHhHHHHHHHHHhCCCcEEEEEcC
Confidence            578999996 778999988888889888776544

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.50  E-value=2.9  Score=26.40  Aligned_cols=75  Identities=13%  Similarity=0.196  Sum_probs=42.0

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHh----hhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQML----LSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      .++++|.|+.++  . +++++++. + .+|.++.-++.=-+ ...+..    ..+.+++++++..|.  .+-+++.-++.
T Consensus        76 p~~vLiiGgG~G--~-~~~~~l~~~~~~~i~~VEID~~Vi~-~a~~~~~~~~~~~~d~r~~i~~~D~--~~~l~~~~~~y  149 (274)
T d1iy9a_          76 PEHVLVVGGGDG--G-VIREILKHPSVKKATLVDIDGKVIE-YSKKFLPSIAGKLDDPRVDVQVDDG--FMHIAKSENQY  149 (274)
T ss_dssp             CCEEEEESCTTC--H-HHHHHTTCTTCSEEEEEESCHHHHH-HHHHHCHHHHTTTTSTTEEEEESCS--HHHHHTCCSCE
T ss_pred             cceEEecCCCCc--H-HHHHHHhcCCcceEEEecCCHHHHH-HHHHhChhhcccccCCCeEEEechH--HHHHhhcCCCC
Confidence            468999996433  3 34555553 4 68999988861100 011111    123456788888876  33344444457


Q ss_pred             CEEEEeC
Q 033236           77 DVVICTI   83 (124)
Q Consensus        77 d~vi~~a   83 (124)
                      |+|+.-.
T Consensus       150 DvIi~D~  156 (274)
T d1iy9a_         150 DVIMVDS  156 (274)
T ss_dssp             EEEEESC
T ss_pred             CEEEEcC
Confidence            7777644

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.22  E-value=0.93  Score=26.75  Aligned_cols=30  Identities=30%  Similarity=0.533  Sum_probs=24.2

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r   35 (124)
                      ++.|-| -|-||+.+.+.+++.+.++..+..
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            577777 599999999999998877766543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=85.20  E-value=1.7  Score=27.39  Aligned_cols=99  Identities=9%  Similarity=0.120  Sum_probs=52.3

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++++=.| |+|++..++++.+... -+|+.++.++.-.+.+ .+..+.+. ..++.+...|+.+.-.    ...+|.|+
T Consensus       104 G~~VLDiG~GsG~lt~~lA~~~~~~-G~V~~vD~~~~~~~~A-~~~~~~~g~~~~v~~~~~d~~~~~~----~~~~D~V~  177 (266)
T d1o54a_         104 GDRIIDTGVGSGAMCAVLARAVGSS-GKVFAYEKREEFAKLA-ESNLTKWGLIERVTIKVRDISEGFD----EKDVDALF  177 (266)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHTTTT-CEEEEECCCHHHHHHH-HHHHHHTTCGGGEEEECCCGGGCCS----CCSEEEEE
T ss_pred             CCEEEECCCCCCHHHHHHHHHhCCC-cEEEEEeCCHHHHHHH-HHHHHHhccccCcEEEecccccccc----ccceeeeE
Confidence            56788777 5566666666654444 4899999886221111 12222222 2345555555432100    12366666


Q ss_pred             EeCc-ccc----------------ceecchHHHHHHHHHHHHhC
Q 033236           81 CTIS-GVH----------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        81 ~~a~-~~~----------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      +-.+ +..                .+.++.....++++++.+.+
T Consensus       178 ~d~p~p~~~l~~~~~~LKpGG~lv~~~P~~~Qv~~~~~~l~~~g  221 (266)
T d1o54a_         178 LDVPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELP  221 (266)
T ss_dssp             ECCSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSS
T ss_pred             ecCCCHHHHHHHHHhhcCCCCEEEEEeCcccHHHHHHHHHHHCC
Confidence            5443 221                13455666777888887765

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=85.03  E-value=0.66  Score=28.80  Aligned_cols=32  Identities=25%  Similarity=0.323  Sum_probs=28.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+ |..|...+..+.+.|.+|.++.+.+
T Consensus        44 DvvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          44 DAIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4889985 9999999999999999999998865

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.01  E-value=0.66  Score=28.75  Aligned_cols=32  Identities=16%  Similarity=0.396  Sum_probs=28.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|.|+ |.-|...+..+++.|.+|.++.+..
T Consensus         3 DviVIG~-G~aG~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           3 DLIVIGG-GSGGMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCeEEEEecCC
Confidence            3688885 8889999999999999999999865

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.98  E-value=0.55  Score=30.19  Aligned_cols=32  Identities=13%  Similarity=0.034  Sum_probs=22.0

Q ss_pred             ceEEEE-ccCChh---cHHHHHHHhhCCCeEEEEeC
Q 033236            4 SKVLVV-GGTGYI---GRRIVKASLAQGHETYVLQR   35 (124)
Q Consensus         4 ~~ili~-Ga~g~i---G~~l~~~l~~~g~~v~~~~r   35 (124)
                      |+|+++ +|+++-   --+++++|.++||+|++++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            566664 444322   23478889999999998874

>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: FkbM-like
domain: Methyltransferase FkbM
species: Methylobacillus flagellatus [TaxId: 405]

Probab=84.74  E-value=3  Score=27.83  Aligned_cols=32  Identities=9%  Similarity=0.167  Sum_probs=27.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++.|+ |..|+.++..|.++|.+|+++..+.
T Consensus        40 ~~~l~g~-~~~~~~~~~~~~~~~~~v~~~~d~~   71 (395)
T d2py6a1          40 RLVILGT-KGFGAHLMNVRHERPCEVIAAVDDF   71 (395)
T ss_dssp             EEEEECS-SSTHHHHHSCSSSCSSEEEEEECTT
T ss_pred             eEEEEcC-chhHHHHHHHHHHCCceEEEEecCc
Confidence            5889986 8889999999999999999887664

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=84.58  E-value=4.1  Score=27.17  Aligned_cols=110  Identities=18%  Similarity=0.142  Sum_probs=61.7

Q ss_pred             eEEEEccCChhcHHH-HHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            5 KVLVVGGTGYIGRRI-VKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l-~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      ..+++. +|.-.... +..+++.|-+|++...- -+   ........ +...++++...|..|.+.+++++++-.-+|++
T Consensus        76 ~a~~~~-SGmaAi~~~l~~l~~~Gd~vl~~~~~-Yg---~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~  150 (392)
T d1gc0a_          76 AGLALA-SGMGAITSTLWTLLRPGDEVLLGNTL-YG---CTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYF  150 (392)
T ss_dssp             EEEEES-SHHHHHHHHHHHHCCTTCEEEEESSC-CS---HHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE
T ss_pred             ceeehh-hHHHHHHHHHHhhccCCCeeeccccc-ch---hhhhhhhhhhccCCcccccCCccCHHHHHHhCCCCCeEEEe
Confidence            345553 45544433 34566778777665433 11   22222222 24567888889999999999999865555555


Q ss_pred             CccccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236           83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF  121 (124)
Q Consensus        83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~  121 (124)
                      -.+.+.. -.+.-...+.+.+.+.| +.-++=.+...|+
T Consensus       151 Esp~NP~-l~v~Di~~i~~ia~~~g-~~~vvDnT~atP~  187 (392)
T d1gc0a_         151 ESPANPN-MHMADIAGVAKIARKHG-ATVVVDNTYCTPY  187 (392)
T ss_dssp             ESSCTTT-CCCCCHHHHHHHHGGGT-CEEEEECTTTHHH
T ss_pred             cccccce-eeecchHHHHHHHHhcC-CEEEEecCccCcc
Confidence            5444321 11222356667777777 5444544444443

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=84.56  E-value=1  Score=27.22  Aligned_cols=72  Identities=17%  Similarity=0.179  Sum_probs=41.7

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +++|+=.| || .|... ..|++.|++|++++.++     ...+.+...  .....+.+|..+..   -.-+..|+|+.+
T Consensus        43 ~~~vLDiG-cG-~G~~~-~~l~~~~~~v~giD~s~-----~~l~~a~~~--~~~~~~~~~~~~l~---~~~~~fD~ii~~  109 (246)
T d2avna1          43 PCRVLDLG-GG-TGKWS-LFLQERGFEVVLVDPSK-----EMLEVAREK--GVKNVVEAKAEDLP---FPSGAFEAVLAL  109 (246)
T ss_dssp             CCEEEEET-CT-TCHHH-HHHHTTTCEEEEEESCH-----HHHHHHHHH--TCSCEEECCTTSCC---SCTTCEEEEEEC
T ss_pred             CCEEEEEC-CC-Cchhc-ccccccceEEEEeeccc-----ccccccccc--cccccccccccccc---cccccccceeee
Confidence            34677666 33 45554 56778899999999987     333333221  11236677775532   111358888876


Q ss_pred             Ccccc
Q 033236           83 ISGVH   87 (124)
Q Consensus        83 a~~~~   87 (124)
                      ....+
T Consensus       110 ~~~~~  114 (246)
T d2avna1         110 GDVLS  114 (246)
T ss_dssp             SSHHH
T ss_pred             cchhh
Confidence            65433

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.37  E-value=0.85  Score=28.51  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=25.9

Q ss_pred             ceEEEEccCChhcHHH-----HHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRI-----VKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l-----~~~l~~~g~~v~~~~r~~   37 (124)
                      .+++++-|-|++|+-.     +..|+++|++|.+++-++
T Consensus         8 p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp   46 (296)
T d1ihua1           8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP   46 (296)
T ss_dssp             CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3455555579999864     566788999999999886

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.36  E-value=2.1  Score=23.80  Aligned_cols=35  Identities=23%  Similarity=0.405  Sum_probs=28.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      +|+++|.|+ |.-+-.-+..|.+--.+|+++.|.+.
T Consensus        34 gk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          34 NKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEeccc
Confidence            688999997 77777777888888889999988763

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.36  E-value=1.2  Score=26.50  Aligned_cols=78  Identities=18%  Similarity=0.175  Sum_probs=49.6

Q ss_pred             CCceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++.++.+.| +...+...++..+..-|.++.+.+-..-.+.+...+..+.+. ..+..+..     .+++.++++++|+|
T Consensus         4 ~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eai~~aDvV   78 (185)
T d1dxha2           4 HDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL-----TEDPKEAVKGVDFV   78 (185)
T ss_dssp             GGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE-----ESCHHHHTTTCSEE
T ss_pred             CCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccHHHHhhhHHHHHHHHHhhccCCeEEE-----EeChhhccccccEE
Confidence            356899999 434689999999999999999987654333333333332221 12222222     23478889999988


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +--..
T Consensus        79 yt~~w   83 (185)
T d1dxha2          79 HTDVW   83 (185)
T ss_dssp             EECCC
T ss_pred             Eeehh
Confidence            77554

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=84.15  E-value=1.2  Score=25.46  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=45.3

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      ++.++.+.|--  +-+...++..+..-|.++++.......+.+........ ....++  .     ..+++++++++|+|
T Consensus         3 ~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~-~~~~~~--~-----~~d~~~av~~aDvv   74 (157)
T d1ml4a2           3 DGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELRE-KGMKVV--E-----TTTLEDVIGKLDVL   74 (157)
T ss_dssp             SSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHH-TTCCEE--E-----ESCTHHHHTTCSEE
T ss_pred             CCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHh-hcccce--e-----ecCHHHhhccCcEE
Confidence            57889999963  67888899999889999988775543333333332221 112221  1     12345677778876


Q ss_pred             EEeC
Q 033236           80 ICTI   83 (124)
Q Consensus        80 i~~a   83 (124)
                      +...
T Consensus        75 y~~~   78 (157)
T d1ml4a2          75 YVTR   78 (157)
T ss_dssp             EECC
T ss_pred             Eeec
Confidence            6544

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: RNase Z-like
domain: Ribonuclease Z (RNase Z)
species: Bacillus subtilis [TaxId: 1423]

Probab=84.05  E-value=1.1  Score=28.09  Aligned_cols=59  Identities=14%  Similarity=0.049  Sum_probs=41.2

Q ss_pred             EEEEcccCChHHHHHHhcccCEEEEeCccccceec-----chHHHHHHHHHHHHhCCccEEEEec
Q 033236           57 HLIEASFADHRSLVEAVKRVDVVICTISGVHFRSH-----NILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        57 ~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .++.+|-.-.+.+.++++++|++||.+........     .......+.+.+.+.+ +++++++-
T Consensus       206 ~~~sgDt~~~~~l~~~~~~~DlLi~E~~~~~~~~~~a~~~~H~t~~~a~~~a~~~~-~k~lvltH  269 (307)
T d1y44a1         206 VVFSGDTRVSDKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEAR-AKQLILTH  269 (307)
T ss_dssp             EEECCSCBCCHHHHHHTTTCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHT-CSEEEEEC
T ss_pred             ccccccccchHHHHHhhcCCceEEEeccccchhhhhcccCCCCCHHHHHHHHHHcC-CCEEEEEC
Confidence            35667776678899999999999998864332111     1234566777777788 78887665

>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Penicillium amagasakiense [TaxId: 63559]

Probab=83.68  E-value=0.68  Score=30.71  Aligned_cols=32  Identities=16%  Similarity=0.318  Sum_probs=27.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      .++|.|+ |.-|..++.+|.+.| ++|.++-+-+
T Consensus        26 D~IIVGs-G~aG~vlA~rLae~~~~~VLlLEaG~   58 (391)
T d1gpea1          26 DYIIAGG-GLTGLTVAAKLTENPKIKVLVIEKGF   58 (391)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            3788885 899999999999988 7999998765

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.63  E-value=1.6  Score=27.31  Aligned_cols=74  Identities=12%  Similarity=0.051  Sum_probs=40.7

Q ss_pred             CceEEEEcc-CChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVGG-TGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~Ga-~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +.+|+=.|. +|...    ..|+++ |.+|++++-++...+... +..... -..+++++.+|..+.. +.  -...|+|
T Consensus        68 ~~~vLDiGcG~G~~~----~~la~~~~~~v~gvD~s~~~i~~a~-~~~~~~gl~~~v~~~~~d~~~l~-~~--~~sfD~V  139 (282)
T d2o57a1          68 QAKGLDLGAGYGGAA----RFLVRKFGVSIDCLNIAPVQNKRNE-EYNNQAGLADNITVKYGSFLEIP-CE--DNSYDFI  139 (282)
T ss_dssp             TCEEEEETCTTSHHH----HHHHHHHCCEEEEEESCHHHHHHHH-HHHHHHTCTTTEEEEECCTTSCS-SC--TTCEEEE
T ss_pred             CCEEEEeCCCCcHHH----hhhhccCCcEEEEEeccchhhhhhh-ccccccccccccccccccccccc-cc--ccccchh
Confidence            457777773 34333    344443 789999998862111111 111111 2357899999986642 00  1347888


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +....
T Consensus       140 ~~~~~  144 (282)
T d2o57a1         140 WSQDA  144 (282)
T ss_dssp             EEESC
T ss_pred             hccch
Confidence            77654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.52  E-value=1.5  Score=26.71  Aligned_cols=78  Identities=15%  Similarity=0.075  Sum_probs=46.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT   82 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   82 (124)
                      +.+++-.|+..+--.+++..+.  |.+|+.+.+++.- .....+.+....-.++.++.+|..+--   .--...|.++..
T Consensus        79 g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l-~~~a~~~l~~~g~~nv~~~~gd~~~g~---~~~~pfD~Iiv~  152 (215)
T d1jg1a_          79 GMNILEVGTGSGWNAALISEIV--KTDVYTIERIPEL-VEFAKRNLERAGVKNVHVILGDGSKGF---PPKAPYDVIIVT  152 (215)
T ss_dssp             TCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHH-HHHHHHHHHHTTCCSEEEEESCGGGCC---GGGCCEEEEEEC
T ss_pred             cceEEEecCCCChhHHHHHHhh--CceeEEEeccHHH-HHHHHHHHHHcCCceeEEEECccccCC---cccCcceeEEee
Confidence            5678988854443445555555  4568888888511 112223333344578999999985421   112347988887


Q ss_pred             Cccc
Q 033236           83 ISGV   86 (124)
Q Consensus        83 a~~~   86 (124)
                      ++..
T Consensus       153 ~a~~  156 (215)
T d1jg1a_         153 AGAP  156 (215)
T ss_dssp             SBBS
T ss_pred             cccc
Confidence            7643

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=83.42  E-value=0.54  Score=25.75  Aligned_cols=35  Identities=17%  Similarity=0.072  Sum_probs=26.7

Q ss_pred             CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      |+++|+|.=-.-.+...+...|.+.|++|......
T Consensus         1 M~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~   35 (121)
T d1mvoa_           1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDG   35 (121)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSH
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCH
Confidence            34788888877777777878888889998865443

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=82.85  E-value=2.1  Score=22.58  Aligned_cols=37  Identities=19%  Similarity=0.380  Sum_probs=25.9

Q ss_pred             CCCceEEEEccCCh-------hcHHHHHHHhhCCCeEEEEeCCC
Q 033236            1 MGKSKVLVVGGTGY-------IGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         1 m~~~~ili~Ga~g~-------iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      |+++-.++.||.+.       .|+++.+.|.+.++++..++...
T Consensus         1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~   44 (96)
T d1iowa1           1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE   44 (96)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             CCceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCcc
Confidence            55554567776542       46778888888899988877654

>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.81  E-value=0.66  Score=27.75  Aligned_cols=35  Identities=29%  Similarity=0.360  Sum_probs=24.0

Q ss_pred             CCCceEEEEccCChhcH----HHHHHHhh-CCCeEEEEeC
Q 033236            1 MGKSKVLVVGGTGYIGR----RIVKASLA-QGHETYVLQR   35 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~----~l~~~l~~-~g~~v~~~~r   35 (124)
                      |++|.-++.|.+|.+..    .++++|.+ .|++|.++-.
T Consensus         1 m~~k~~Ill~vtGSIAayk~~~lv~~L~~~~g~~V~vi~T   40 (181)
T d1qzua_           1 MERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTT   40 (181)
T ss_dssp             CCSSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence            67776677777887774    67777877 5899976643

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.75  E-value=0.53  Score=30.05  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=28.2

Q ss_pred             ceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~   37 (124)
                      ..++|.|+ |..|...+..|.++  |++|.++.+.+
T Consensus        51 ~~~~~~g~-g~~g~~~a~~~~~~~~~~~~~~~~~~~   85 (311)
T d2gjca1          51 SDVIIVGA-GSSGLSAAYVIAKNRPDLKVCIIESSV   85 (311)
T ss_dssp             ESEEEECC-SHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhCCCCeEEEEEcCC
Confidence            45899985 99999999999854  89999998875

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.44  E-value=3.8  Score=26.02  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=41.8

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHh----hhhccCCeEEEEcccCChHHHHHHhccc
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQML----LSFKKQGAHLIEASFADHRSLVEAVKRV   76 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (124)
                      .++++|.|+.++   .+++++++.  ..+|.++.-++.=-+ ...+..    ..+.+++++++..|.  .+-+++.-++.
T Consensus        79 pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~-~a~~~~~~~~~~~~d~rv~i~~~Da--~~~l~~~~~~y  152 (285)
T d2o07a1          79 PRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQ-VSKKFLPGMAIGYSSSKLTLHVGDG--FEFMKQNQDAF  152 (285)
T ss_dssp             CCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHH-HHHHHCHHHHGGGGCTTEEEEESCH--HHHHHTCSSCE
T ss_pred             cCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHH-HHHhhchhhccccCCCCceEEEccH--HHHHhcCCCCC
Confidence            468999986533   345666664  368888887751100 011111    123457788887775  33344434457


Q ss_pred             CEEEEeC
Q 033236           77 DVVICTI   83 (124)
Q Consensus        77 d~vi~~a   83 (124)
                      |+||.-+
T Consensus       153 DvIi~D~  159 (285)
T d2o07a1         153 DVIITDS  159 (285)
T ss_dssp             EEEEEEC
T ss_pred             CEEEEcC
Confidence            7777654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.31  E-value=3.2  Score=24.31  Aligned_cols=99  Identities=21%  Similarity=0.186  Sum_probs=52.5

Q ss_pred             eEEEEccCChhcHHHHHHHhhC---CCeEEEEeCCCCCCchHHHHHhhhhcc------CCeEE------------EEccc
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQ---GHETYVLQRPDIGLDIDKLQMLLSFKK------QGAHL------------IEASF   63 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~~------------~~~D~   63 (124)
                      ++.|-| -|-||+.+.+.++++   +.+|+.+.. . . +.+....+-...+      ..+++            ....-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd-~-~-~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~   77 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIND-L-T-DTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAE   77 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEEC-S-S-CHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECC
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEecc-C-c-cHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeC
Confidence            567777 699999999998863   256655532 2 1 2333333222211      11111            11122


Q ss_pred             CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        64 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      .+++++.=--.++|+|+=|.|....        ..-++.-.+.| +++++++.
T Consensus        78 ~~p~~i~W~~~gvD~ViEcTG~f~t--------~~~~~~hl~~G-akkViiSA  121 (169)
T d1hdgo1          78 PDPSKLPWKDLGVDFVIESTGVFRN--------REKAELHLQAG-AKKVIITA  121 (169)
T ss_dssp             SSGGGSCHHHHTCCEEEECSSSCCB--------HHHHTHHHHTT-CSEEEESS
T ss_pred             CChhhCCccccCCCEEEEecceecc--------ccchhhhccCC-CceEEEec
Confidence            2444443222368999999995432        22333334567 78888865

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=82.25  E-value=0.5  Score=30.46  Aligned_cols=31  Identities=23%  Similarity=0.296  Sum_probs=27.8

Q ss_pred             EEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++|.|+ |.-|...+.++.++|.+|+++.+.+
T Consensus        10 VlVVG~-G~AGl~AAl~aa~~G~~V~lleK~~   40 (330)
T d1neka2          10 AVVIGA-GGAGMRAALQISQSGQTCALLSKVF   40 (330)
T ss_dssp             CEEECC-SHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEeCCC
Confidence            799985 9999999999999999999998765

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.18  E-value=0.73  Score=27.42  Aligned_cols=32  Identities=25%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      .++|+|+ |--|...+.++.+.|.+|.++.+..
T Consensus         5 DviIIGg-GpAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           5 DVIVIGA-GPGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            4788986 8899999999999999999998753

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=81.88  E-value=3.4  Score=24.25  Aligned_cols=23  Identities=30%  Similarity=0.446  Sum_probs=18.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQG   27 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g   27 (124)
                      |++.|-| -|-||+.+.+.++++.
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~   23 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRK   23 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCC
Confidence            4788888 5999999999887643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=81.80  E-value=0.027  Score=34.99  Aligned_cols=33  Identities=9%  Similarity=0.249  Sum_probs=28.7

Q ss_pred             ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236            4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD   37 (124)
Q Consensus         4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~   37 (124)
                      ++++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus       181 ~~vvViGg-G~~g~e~A~~l~~~g~~Vtli~r~~  213 (233)
T d1djqa3         181 APRLIADA-TFTGHRVAREIEEANPQIAIPYKRE  213 (233)
T ss_dssp             SCCCHHHH-HHHHHHHHHTTTSSCTTSCCCCCCC
T ss_pred             CceeEecC-chHHHHHHHHHHhcCCceEEEEecc
Confidence            56778875 9999999999999999998888875

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.72  E-value=3.3  Score=24.11  Aligned_cols=100  Identities=22%  Similarity=0.256  Sum_probs=53.9

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhcc------CCeEE------------EEcccCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKK------QGAHL------------IEASFAD   65 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~------~~~~~------------~~~D~~~   65 (124)
                      ++.|-| -|-||+.+.+.+++.. .+|..+....  .+.+....+-...+      ..++.            ....-.+
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~--~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~   78 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPF--MDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTT--CCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCC--CChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC
Confidence            567777 5999999999998764 5655543211  11233332222211      11110            0111234


Q ss_pred             hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236           66 HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE  116 (124)
Q Consensus        66 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  116 (124)
                      ++++.=--.++|+|+=|.|...        +..-++.-.+.| +++++.+.
T Consensus        79 p~~i~W~~~gvdiViEcTG~f~--------~~~~~~~hl~~g-akkViiSA  120 (166)
T d2b4ro1          79 PSQIPWGKCQVDVVCESTGVFL--------TKELASSHLKGG-AKKVIMSA  120 (166)
T ss_dssp             GGGCCHHHHTCSEEEECSSSCC--------SHHHHTHHHHTT-CSEEEESS
T ss_pred             hHHccccccCCCEEEEeccccc--------chhhhhhhhccC-CCEEEEec
Confidence            4444333336999999999543        223333444677 78888866

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.66  E-value=3.2  Score=25.28  Aligned_cols=81  Identities=11%  Similarity=0.093  Sum_probs=46.3

Q ss_pred             CceEEEEcc-CChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHH----HhhhhccCCeEEEEcccCChHHHHHHh
Q 033236            3 KSKVLVVGG-TGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQ----MLLSFKKQGAHLIEASFADHRSLVEAV   73 (124)
Q Consensus         3 ~~~ili~Ga-~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (124)
                      +.+++-.|. +|+....+++.+...|    .+|+.+.+++.-.+.+...    ......-.++.++.+|..+-..   --
T Consensus        81 g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~---~~  157 (223)
T d1r18a_          81 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP---PN  157 (223)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG---GG
T ss_pred             CCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc---cc
Confidence            568999994 5655555555555555    4899998876211111100    0111123578999999754211   12


Q ss_pred             cccCEEEEeCccc
Q 033236           74 KRVDVVICTISGV   86 (124)
Q Consensus        74 ~~~d~vi~~a~~~   86 (124)
                      ...|.|+..++..
T Consensus       158 ~~fD~Iiv~~a~~  170 (223)
T d1r18a_         158 APYNAIHVGAAAP  170 (223)
T ss_dssp             CSEEEEEECSCBS
T ss_pred             cceeeEEEEeech
Confidence            2479888877753

>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD
species: Staphylococcus epidermidis [TaxId: 1282]

Probab=81.43  E-value=0.52  Score=28.01  Aligned_cols=33  Identities=18%  Similarity=0.073  Sum_probs=20.6

Q ss_pred             CCCceEEEEccCChhcHH----HHHHHhhCCCeEEEEeC
Q 033236            1 MGKSKVLVVGGTGYIGRR----IVKASLAQGHETYVLQR   35 (124)
Q Consensus         1 m~~~~ili~Ga~g~iG~~----l~~~l~~~g~~v~~~~r   35 (124)
                      |.+|  ++.|.+|.++..    ++++|.+.|++|.++-.
T Consensus         1 m~~k--Ill~vtGsiaa~k~~~li~~L~~~g~~V~vv~T   37 (174)
T d1g5qa_           1 MYGK--LLICATASINVININHYIVELKQHFDEVNILFS   37 (174)
T ss_dssp             CBSC--EEEEECSCGGGGGHHHHHHHHTTTBSCEEEEEC
T ss_pred             CCCe--EEEEEECHHHHHHHHHHHHHHHHCCCeEEEEEe
Confidence            4444  334445666554    67777788999966543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.31  E-value=4.6  Score=25.40  Aligned_cols=70  Identities=21%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhh--------------hhccCCeEEEEcccCChH
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLL--------------SFKKQGAHLIEASFADHR   67 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~~   67 (124)
                      .++++|.|+.++  . +++++++.+ .+|.++..++     ...+...              ...+++++++.+|..  +
T Consensus        73 p~~vLiiG~G~G--~-~~~~~l~~~~~~v~~VEiD~-----~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~--~  142 (276)
T d1mjfa_          73 PKRVLVIGGGDG--G-TVREVLQHDVDEVIMVEIDE-----DVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF--E  142 (276)
T ss_dssp             CCEEEEEECTTS--H-HHHHHTTSCCSEEEEEESCH-----HHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH--H
T ss_pred             CceEEEecCCch--H-HHHHHHHhCCceEEEecCCH-----HHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH--H
Confidence            468999996533  2 234545544 5788888775     2222111              113467788877763  2


Q ss_pred             HHHHHhcccCEEEEeC
Q 033236           68 SLVEAVKRVDVVICTI   83 (124)
Q Consensus        68 ~~~~~~~~~d~vi~~a   83 (124)
                      -+++ -++.|+||.-+
T Consensus       143 ~l~~-~~~yDvIi~D~  157 (276)
T d1mjfa_         143 FIKN-NRGFDVIIADS  157 (276)
T ss_dssp             HHHH-CCCEEEEEEEC
T ss_pred             HHhc-cCCCCEEEEeC
Confidence            2332 35678777643

>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Aspergillus niger [TaxId: 5061]

Probab=81.25  E-value=0.89  Score=29.96  Aligned_cols=32  Identities=16%  Similarity=0.289  Sum_probs=27.1

Q ss_pred             eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236            5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD   37 (124)
Q Consensus         5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~   37 (124)
                      .++|.|+ |.-|..++.+|.+.+ ++|.++-+-+
T Consensus        19 D~IIVGs-G~aG~vlA~rLse~~~~~VLvLEaG~   51 (385)
T d1cf3a1          19 DYIIAGG-GLTGLTTAARLTENPNISVLVIESGS   51 (385)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSTTCCEEEEESSC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCCeEEEECCCC
Confidence            4788885 889999999999876 8999998764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.13  E-value=4.8  Score=25.55  Aligned_cols=32  Identities=19%  Similarity=0.294  Sum_probs=22.1

Q ss_pred             CceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPD   37 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~   37 (124)
                      .++++|.|+.++   .+++++++. + .+|.++.-++
T Consensus        81 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~  114 (290)
T d1xj5a_          81 PKKVLVIGGGDG---GVLREVARHASIEQIDMCEIDK  114 (290)
T ss_dssp             CCEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCH
T ss_pred             CcceEEecCCch---HHHHHHHhcccceeeEEecCCH
Confidence            468999996533   345666665 4 5888888875

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.05  E-value=2.3  Score=26.74  Aligned_cols=100  Identities=15%  Similarity=0.190  Sum_probs=60.0

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhcccCE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVKRVDV   78 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~   78 (124)
                      +++++=.| |+|.+..++++.+...| +|+.++.++.-.+.+ .+..+.+   ...++.++.+|+.+.+.-   -..+|+
T Consensus        97 G~~VLE~G~GsG~lt~~La~~vgp~G-~V~~~d~~~~~~~~A-r~n~~~~~~~~~~nv~~~~~d~~~~~~~---~~~fDa  171 (264)
T d1i9ga_          97 GARVLEAGAGSGALTLSLLRAVGPAG-QVISYEQRADHAEHA-RRNVSGCYGQPPDNWRLVVSDLADSELP---DGSVDR  171 (264)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHCTTS-EEEEECSCHHHHHHH-HHHHHHHHTSCCTTEEEECSCGGGCCCC---TTCEEE
T ss_pred             CCEEEecCcCCcHHHHHHHHhhCCCc-EEEEecCCHHHHHHH-HHhhhhhccCCCceEEEEeccccccccc---CCCcce
Confidence            56777666 67888888888887777 688888876221111 1111121   235788888887643210   124787


Q ss_pred             EEEeC-cccc----------------ceecchHHHHHHHHHHHHhC
Q 033236           79 VICTI-SGVH----------------FRSHNILMQLKLVDAIREAG  107 (124)
Q Consensus        79 vi~~a-~~~~----------------~~~~~~~~~~~~~~~~~~~~  107 (124)
                      |+... .|..                .+.+++....++++++...+
T Consensus       172 V~ldlp~P~~~l~~~~~~LkpGG~lv~~~P~i~Qv~~~~~~l~~~~  217 (264)
T d1i9ga_         172 AVLDMLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQ  217 (264)
T ss_dssp             EEEESSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHS
T ss_pred             EEEecCCHHHHHHHHHhccCCCCEEEEEeCccChHHHHHHHHHHcC
Confidence            66543 2332                24577888888888886543

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=81.04  E-value=1.9  Score=26.42  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=48.9

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++|+=.|. | .|..+ ..+++.| .+|++++.++...+.+..+ ..... ..++.+.++|..+...  ..-+..|+|+
T Consensus        25 ~~~VLDlGC-G-~G~~~-~~~~~~~~~~v~GiD~S~~~l~~A~~r-~~~~~~~~~v~f~~~D~~~~~~--~~~~~fD~V~   98 (252)
T d1ri5a_          25 GDSVLDLGC-G-KGGDL-LKYERAGIGEYYGVDIAEVSINDARVR-ARNMKRRFKVFFRAQDSYGRHM--DLGKEFDVIS   98 (252)
T ss_dssp             TCEEEEETC-T-TTTTH-HHHHHHTCSEEEEEESCHHHHHHHHHH-HHTSCCSSEEEEEESCTTTSCC--CCSSCEEEEE
T ss_pred             cCEEEEecc-c-CcHHH-HHHHHcCCCeEEEecCCHHHHHHHHHH-HHhcCCCcceEEEEcchhhhcc--cccccceEEE
Confidence            456777762 3 35544 4455656 5799999987222111111 11111 2368899999854321  0113489887


Q ss_pred             EeCccccceecchHHHHHHHHHHHH
Q 033236           81 CTISGVHFRSHNILMQLKLVDAIRE  105 (124)
Q Consensus        81 ~~a~~~~~~~~~~~~~~~~~~~~~~  105 (124)
                      ...+. .+.-.+......+++.+.+
T Consensus        99 ~~~~l-~~~~~~~~~~~~~l~~i~~  122 (252)
T d1ri5a_          99 SQFSF-HYAFSTSESLDIAQRNIAR  122 (252)
T ss_dssp             EESCG-GGGGSSHHHHHHHHHHHHH
T ss_pred             Eccee-eecCCCHHHHHHHHHHHhc
Confidence            66543 3322233333444444443

>d1js1x2 c.78.1.1 (X:164-324) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Transcarbamylase-like protein
species: Bacteroides fragilis [TaxId: 817]

Probab=80.81  E-value=3.5  Score=23.80  Aligned_cols=36  Identities=11%  Similarity=0.039  Sum_probs=27.6

Q ss_pred             CceEEEEcc------CChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236            3 KSKVLVVGG------TGYIGRRIVKASLAQGHETYVLQRPDI   38 (124)
Q Consensus         3 ~~~ili~Ga------~g~iG~~l~~~l~~~g~~v~~~~r~~~   38 (124)
                      ++++++|.+      +..+...++..+..-|.++.+.+-..-
T Consensus         3 ~~~~~~~~~~h~~~~~~~Va~S~i~~l~~~G~~v~~~~P~~~   44 (161)
T d1js1x2           3 RPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGY   44 (161)
T ss_dssp             SCEEEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTC
T ss_pred             CCeEEEEeccCCCCCccHHHHHHHHHHHHcCCEEEEECCccc
Confidence            457888887      555667788888888999988876653

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.78  E-value=4.2  Score=24.65  Aligned_cols=81  Identities=10%  Similarity=-0.028  Sum_probs=47.5

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-----hccCCeEEEEcccCChHHHHHHhcccC
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-----FKKQGAHLIEASFADHRSLVEAVKRVD   77 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~d   77 (124)
                      +.+++-.|...+--.+++..+.....+|+.+++++.-.+.+ .+.+..     ....++.++.+|..+...   --...|
T Consensus        77 g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a-~~~l~~~~~~~~~~~~~~~~~gD~~~~~~---~~~~fD  152 (224)
T d1i1na_          77 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS-VNNVRKDDPTLLSSGRVQLVVGDGRMGYA---EEAPYD  152 (224)
T ss_dssp             TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHH-HHHHHHHCTHHHHTSSEEEEESCGGGCCG---GGCCEE
T ss_pred             CCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHH-HHhccccCcccccccceEEEEeecccccc---hhhhhh
Confidence            46899999654545556666666667999999986211111 111111     123567888888753211   122479


Q ss_pred             EEEEeCcccc
Q 033236           78 VVICTISGVH   87 (124)
Q Consensus        78 ~vi~~a~~~~   87 (124)
                      +|+.+++..+
T Consensus       153 ~I~~~~~~~~  162 (224)
T d1i1na_         153 AIHVGAAAPV  162 (224)
T ss_dssp             EEEECSBBSS
T ss_pred             hhhhhcchhh
Confidence            8888877543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.72  E-value=3.6  Score=26.07  Aligned_cols=72  Identities=19%  Similarity=0.272  Sum_probs=42.6

Q ss_pred             CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236            3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRVDVVI   80 (124)
Q Consensus         3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   80 (124)
                      +++|+-.|++  .|. ++..+++.| .+|++++.++.-  ....+.... ....++.++.+|+.+...   -.+.+|+|+
T Consensus        36 ~~~VLDiGcG--~G~-lsl~aa~~Ga~~V~aid~s~~~--~~a~~~~~~~~~~~~i~~~~~~~~~l~~---~~~~~D~Iv  107 (311)
T d2fyta1          36 DKVVLDVGCG--TGI-LSMFAAKAGAKKVLGVDQSEIL--YQAMDIIRLNKLEDTITLIKGKIEEVHL---PVEKVDVII  107 (311)
T ss_dssp             TCEEEEETCT--TSH-HHHHHHHTTCSEEEEEESSTHH--HHHHHHHHHTTCTTTEEEEESCTTTSCC---SCSCEEEEE
T ss_pred             cCEEEEECCC--CCH-HHHHHHHcCCCEEEEEeCHHHH--HHHHHHHHHhCCCccceEEEeeHHHhcC---ccccceEEE
Confidence            5678888843  332 345566778 589999987621  111111111 124578999998876431   124688887


Q ss_pred             Ee
Q 033236           81 CT   82 (124)
Q Consensus        81 ~~   82 (124)
                      ..
T Consensus       108 se  109 (311)
T d2fyta1         108 SE  109 (311)
T ss_dssp             EC
T ss_pred             Ee
Confidence            64

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=80.25  E-value=3.5  Score=23.41  Aligned_cols=35  Identities=9%  Similarity=0.031  Sum_probs=27.4

Q ss_pred             CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236            2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRP   36 (124)
Q Consensus         2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~   36 (124)
                      ++.++.+.|-.  |-+...++..+..-|.+++.+...
T Consensus         2 ~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~   38 (153)
T d1pg5a2           2 DGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISP   38 (153)
T ss_dssp             TTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECC
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecc
Confidence            57899999964  348999999999999887665543

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.06  E-value=3.7  Score=24.02  Aligned_cols=73  Identities=14%  Similarity=0.241  Sum_probs=41.9

Q ss_pred             CceEEEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh--hhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236            3 KSKVLVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL--SFKKQGAHLIEASFADHRSLVEAVKRVDVV   79 (124)
Q Consensus         3 ~~~ili~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   79 (124)
                      +++++=.| |+|.++    ..+++.+.+|++++.++...+..+ +...  .....+++++.+|..+.-  .  -+..|.|
T Consensus        53 ~~~VLDiGcG~G~~~----~~la~~~~~v~~iD~s~~~i~~a~-~n~~~~~l~~~~i~~~~~d~~~~~--~--~~~fD~I  123 (194)
T d1dusa_          53 DDDILDLGCGYGVIG----IALADEVKSTTMADINRRAIKLAK-ENIKLNNLDNYDIRVVHSDLYENV--K--DRKYNKI  123 (194)
T ss_dssp             TCEEEEETCTTSHHH----HHHGGGSSEEEEEESCHHHHHHHH-HHHHHTTCTTSCEEEEECSTTTTC--T--TSCEEEE
T ss_pred             CCeEEEEeecCChhH----HHHHhhccccceeeeccccchhHH-HHHHHhCCccceEEEEEcchhhhh--c--cCCceEE
Confidence            45777666 344433    445667789999998862211111 1111  123346889999986531  1  1358999


Q ss_pred             EEeCc
Q 033236           80 ICTIS   84 (124)
Q Consensus        80 i~~a~   84 (124)
                      +.+..
T Consensus       124 i~~~p  128 (194)
T d1dusa_         124 ITNPP  128 (194)
T ss_dssp             EECCC
T ss_pred             EEccc
Confidence            87654