Citrus Sinensis ID: 033395

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWISSFR
Secondary Structure (PSIPRED)
ccccccHHHHHHccccccccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHcccEEcccccccccccccccccHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEccccEEccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHcccccccEEEccEEEEEEEccHHHHHHHHHHHHHHHHccccEEcccccccEEEccccHHHHHHHHHHHHHccccEEEEEEEccccccEEEEEEEEEccccEEEHccc
Coil and Loop (DISEMBL)
mallpegttellhhdklllplikcqNVIILTATNVTELDKEWNCLIELLRSgglslmepytskslttnlsdleaAQPLSKlclefpdlhigcyrksrqgpliisfegkvkdSATWISSFR
Flexible Loop (DISEMBL)
MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKsrqgpliisfegkvkdsatwissfr
Low Complexity Region (SEG)
MALLPEGTTEllhhdklllplIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWISSFR
Disordered region (IsUnstruct)
*********ELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATW*****
Disordered Region (DISOPRED)
****PEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWISSFR
Disordered Region (DISEMBL)
MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWISSFR
Disordered Region (DISPRO)
***LPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWI**F*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATWISSFR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
225441189	514	PREDICTED: uncharacterized protein LOC10	0.9	0.210	0.807	2e-43
255556898	512	molybdopterin-binding, putative [Ricinus	0.9	0.210	0.743	1e-40
356572474	506	PREDICTED: uncharacterized protein LOC10	0.9	0.213	0.724	2e-39
449440409	512	PREDICTED: uncharacterized protein LOC10	0.9	0.210	0.715	9e-39
357510801	502	FAD synthetase [Medicago truncatula] gi|	0.9	0.215	0.697	3e-38
356505260	506	PREDICTED: uncharacterized protein LOC10	0.9	0.213	0.697	5e-38
14423558	497	putative protein [Arabidopsis thaliana]	0.891	0.215	0.666	3e-35
18414227	497	phosphoadenosine phosphosulfate (PAPS) r	0.891	0.215	0.666	3e-35
297810413	497	phosphoadenosine phosphosulfate reductas	0.891	0.215	0.666	3e-35
413947000	490	hypothetical protein ZEAMMB73_828913 [Ze	0.916	0.224	0.594	8e-31

>gi|225441189|ref|XP_002269812.1| PREDICTED: uncharacterized protein LOC100250368 [Vitis vinifera] gi|297739964|emb|CBI30146.3| unnamed protein product [Vitis vinifera]

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/109 (80%), Positives = 95/109 (87%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGG-LSLMEP 59
           MA LPEG TELLHH+KL +PLIKCQNV ILTATNVTELDKEW+CLIEL RS G L LMEP
Sbjct: 381 MAQLPEGITELLHHEKLSVPLIKCQNVFILTATNVTELDKEWDCLIELTRSSGLLVLMEP 440

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           + SK +TTNLSD+EAAQ LSKLC EFPDL+IGCYRKSR  PLIISFEGK
Sbjct: 441 FLSKRMTTNLSDVEAAQALSKLCFEFPDLYIGCYRKSRLAPLIISFEGK 489

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556898|ref|XP_002519482.1| molybdopterin-binding, putative [Ricinus communis] gi|223541345|gb|EEF42896.1| molybdopterin-binding, putative [Ricinus communis]

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 92/109 (84%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLMEP 59
           MALLPEG TELLHHDKL +P+IKCQNVIIL ATN+ ELD+EW CL E  RS GL + MEP
Sbjct: 379 MALLPEGITELLHHDKLPVPMIKCQNVIILAATNIGELDREWECLTEFTRSYGLLATMEP 438

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           + +K LTTN+SD+E AQPLSKLCLEFPDL+IG YRKSR G LII+FEGK
Sbjct: 439 FAAKRLTTNISDVEIAQPLSKLCLEFPDLNIGVYRKSRNGTLIITFEGK 487

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572474|ref|XP_003554393.1| PREDICTED: uncharacterized protein LOC100816619 [Glycine max]

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 94/109 (86%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLMEP 59
           MA LPEG TEL HHDKL +PLIKC+NVIIL+ATNV EL+K+W+C IEL +S  L +L+EP
Sbjct: 373 MAQLPEGITELWHHDKLSVPLIKCENVIILSATNVPELEKQWDCWIELAKSSDLLALLEP 432

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           Y SK +TTNLSD+E AQPLSKLCLEFPDL+IGCYRK+R G LI+SF+GK
Sbjct: 433 YVSKDVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKARYGSLIVSFKGK 481

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440409|ref|XP_004137977.1| PREDICTED: uncharacterized protein LOC101215823 [Cucumis sativus] gi|449501110|ref|XP_004161280.1| PREDICTED: uncharacterized LOC101215823 [Cucumis sativus]

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLMEP 59
           MA LPEG TELLHH+KL +PLIKC NVI+LTATN+TELD +W+CLIEL R+G L  L+EP
Sbjct: 373 MAQLPEGITELLHHEKLPVPLIKCHNVIVLTATNLTELDLQWDCLIELTRTGDLFPLLEP 432

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           Y SK LTT LSD+E A  L+KLCLEFPD+HIGCYR++R GP+IISF+GK
Sbjct: 433 YKSKHLTTKLSDVEIAPSLAKLCLEFPDIHIGCYREARSGPIIISFKGK 481

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510801|ref|XP_003625689.1| FAD synthetase [Medicago truncatula] gi|355500704|gb|AES81907.1| FAD synthetase [Medicago truncatula] gi|388512539|gb|AFK44331.1| unknown [Medicago truncatula]

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 95/109 (87%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLMEP 59
           MA LPEG TELLHHD L +PL+KCQNVIIL+AT+++E++K+W+CLIEL +S  L +L+EP
Sbjct: 369 MAQLPEGITELLHHDSLTVPLMKCQNVIILSATDISEMEKQWDCLIELTKSSDLLTLLEP 428

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           + SK +TTNLSD+E AQPLSKLCLEFPDL IGCYRK+R G +IISF+GK
Sbjct: 429 FISKHVTTNLSDVEIAQPLSKLCLEFPDLCIGCYRKARYGSVIISFKGK 477

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505260|ref|XP_003521410.1| PREDICTED: uncharacterized protein LOC100795114 [Glycine max]

 Score =  161 bits (407), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 93/109 (85%), Gaps = 1/109 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGL-SLMEP 59
           MA LPEG TEL HHDKL +PLIKC+NVIIL+ATNV E++K+W+C IEL +S  L +L+EP
Sbjct: 373 MAQLPEGITELWHHDKLSVPLIKCENVIILSATNVPEMEKQWDCWIELAKSSDLLALLEP 432

Query: 60  YTSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           Y SK +TT+LSD+E AQPLSKLCLEFPDL+IGCYR +R G LI+SF+GK
Sbjct: 433 YVSKHVTTSLSDVEIAQPLSKLCLEFPDLYIGCYRNARYGSLIVSFKGK 481

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14423558|gb|AAK62461.1|AF387016_1 putative protein [Arabidopsis thaliana] gi|20148293|gb|AAM10037.1| putative protein [Arabidopsis thaliana]

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
           MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + GG SL+E Y
Sbjct: 366 MAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE-Y 424

Query: 61  TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           +S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GK
Sbjct: 425 SSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGK 472

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414227|ref|NP_568117.1| phosphoadenosine phosphosulfate (PAPS) reductase family protein [Arabidopsis thaliana] gi|7378626|emb|CAB83302.1| putative protein [Arabidopsis thaliana] gi|332003219|gb|AED90602.1| phosphoadenosine phosphosulfate (PAPS) reductase family protein [Arabidopsis thaliana]

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
           MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + GG SL+E Y
Sbjct: 366 MAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE-Y 424

Query: 61  TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           +S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GK
Sbjct: 425 SSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGK 472

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810413|ref|XP_002873090.1| phosphoadenosine phosphosulfate reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318927|gb|EFH49349.1| phosphoadenosine phosphosulfate reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
           MA LPEG TELLHH+KL +PLIKC+NVI+L ATN  EL+KEW CL EL + GG SL+E Y
Sbjct: 366 MAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE-Y 424

Query: 61  TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
           +S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GK
Sbjct: 425 SSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGK 472

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413947000|gb|AFW79649.1| hypothetical protein ZEAMMB73_828913 [Zea mays]

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
           MA LPEG TELLHH  L LPLIKC+NVI L ATN+ ELD EW+CL+    S GL   +P+
Sbjct: 374 MAQLPEGITELLHHKTLPLPLIKCRNVIALAATNMDELDTEWDCLLGTQES-GLMPSKPF 432

Query: 61  TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKD 111
            SK L+T LSD++ A  L+KLCLEF D++IGC+R SR GPL+++  GKV D
Sbjct: 433 VSKHLSTTLSDVQIASVLAKLCLEFSDVYIGCHRISRAGPLVVNLTGKVDD 483

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:2831849	497	AT5G03430 [Arabidopsis thalian	0.891	0.215	0.592	5.9e-29

TAIR|locus:2831849 AT5G03430 [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 5.9e-29, P = 5.9e-29
 Identities = 64/108 (59%), Positives = 79/108 (73%)

Query:     1 MALLPEGTTEXXXXXXXXXXXIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
             MA LPEG TE           IKC+NVI+L ATN  EL+KEW CL EL + GG SL+E Y
Sbjct:   366 MAQLPEGITELLHHEKLSVPLIKCRNVIVLAATNTEELEKEWECLTELTKLGGGSLIE-Y 424

Query:    61 TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGK 108
             +S+ L T+L+D+E A+PLSKL LEFPD+++GCYRKSRQGP+II   GK
Sbjct:   425 SSRRLMTSLTDVEVAEPLSKLGLEFPDIYLGCYRKSRQGPIIICLTGK 472


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120       109   0.00091  102 3  11 22  0.46    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  128 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.21u 0.10s 11.31t   Elapsed:  00:00:01
  Total cpu time:  11.21u 0.10s 11.31t   Elapsed:  00:00:01
  Start:  Sat May 11 01:49:47 2013   End:  Sat May 11 01:49:48 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
PRK03670	252	competence damage-inducible protein A; Provisional	99.93
COG1058	255	CinA Predicted nucleotide-utilizing enzyme related	99.91
PRK00549	414	competence damage-inducible protein A; Provisional	99.83
PRK01215	264	competence damage-inducible protein A; Provisional	99.68
PRK03673	396	hypothetical protein; Provisional	99.63
TIGR00200	413	cinA_nterm competence/damage-inducible protein Cin	99.53
cd00885	170	cinA Competence-damaged protein. CinA is the first	99.11
PF00994	144	MoCF_biosynth: Probable molybdopterin binding doma	86.84

>PRK03670 competence damage-inducible protein A; Provisional

Probab=99.93  E-value=3.3e-26  Score=183.83  Aligned_cols=106  Identities=18%  Similarity=0.182  Sum_probs=92.3

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHH-HHHHHHhCCCcCCCceEEEEEEec-CCchhh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNC-LIELLRSGGLSLMEPYTSKSLTTN-LSDLEA   74 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~-l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~I   74 (120)
                      ||++|+|| ++|+||+..||||.++    |||+|||||. .|+.||+. ++|.|.+      .++.++++.+. .+||+|
T Consensus       125 mA~~P~ga-~~l~N~~g~ApG~~~~~~~~~v~~lPGvP~-e~~~M~~~~v~p~l~~------~~~~~~~~~~~~~~Es~l  196 (252)
T PRK03670        125 MAYLPEGA-EPLENTEGAAPGAYIEHKGTKIFVLPGMPR-EMKAMLEKEVLPRLGE------RKFVQKKFLAEITDESKL  196 (252)
T ss_pred             eeCCCCCC-EECCCCCCcCceEEEEECCeEEEEeCCChH-HHHHHHHHHHHHhhcc------CCeEEEEEEeCCCCHHHH
Confidence            89999995 8999999999999999    8999999554 57889998 9999854      56889988876 799999


Q ss_pred             hhhHHHHHHhCCCceeeecccccCCCeEEEEeeecccceee
Q 033395           75 AQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSATW  115 (120)
Q Consensus        75 A~~L~~i~~~~pdv~IGSYP~~~~g~~~~V~rg~D~~~~~~  115 (120)
                      |+.|++++++|+ |+|||||+..+.++.+++||+|++++..
T Consensus       197 a~~l~~~~~~~~-v~igSyP~~~~~~~~l~~~g~~~~~~~~  236 (252)
T PRK03670        197 APILEEALERFN-VKIHSSPKGFGKYIGIIIFAEDEEEIEK  236 (252)
T ss_pred             HHHHHHHHHHCC-ceEecCCCCCCCcEEEEEEECCHHHHHH
Confidence            999999999996 9999999833346788999999977653

>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]

Probab=99.91  E-value=2.7e-24  Score=174.46  Aligned_cols=110  Identities=25%  Similarity=0.321  Sum_probs=94.4

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHHHHHHHHhCCCcCCCceEEEEEEec-CCchhhh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTN-LSDLEAA   75 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~IA   75 (120)
                      ||.+|+|| ++|+||+..||||.|+    |||+|||||. +|+.||+..++.+..+ .-...++.|+++++. .+||.||
T Consensus       118 ~A~~P~Ga-~~l~NpvG~APG~~v~~~~~~v~~lPGvP~-Em~~M~e~~~~~~l~~-~~~~~~~~~~~~~~~gi~ES~la  194 (255)
T COG1058         118 QAMLPEGA-EVLDNPVGTAPGFVVEGNGKNVYVLPGVPS-EMKPMFENVLLPLLTG-RFPSTKYYSRVLRVFGIGESSLA  194 (255)
T ss_pred             hccCCCCC-EeCCCCCCCCCeeEEecCCeEEEEeCCCCH-HHHHHHHHHHHHHhhc-cCCCCceEEEEEEEcCCChHHHH
Confidence            89999995 8999999999999999    9999999776 6899999999998764 111278999999988 8999999


Q ss_pred             hhHHHHHHhCCCceeeecccccCCCe-EE--EEeeecccce
Q 033395           76 QPLSKLCLEFPDLHIGCYRKSRQGPL-II--SFEGKVKDSA  113 (120)
Q Consensus        76 ~~L~~i~~~~pdv~IGSYP~~~~g~~-~~--V~rg~D~~~~  113 (120)
                      +.|.+++++||+++|+|||++.+..+ .+  ..+++|.+.+
T Consensus       195 ~~L~~i~~~~~~~~i~s~p~~~~~~~~~~~i~~~~~~~~~~  235 (255)
T COG1058         195 PTLKDLQDEQPNVTIASYPKDGEVRLRELVIRAEARDEEEA  235 (255)
T ss_pred             HHHHHHHhcCCCCEEEecCCCCceeccceEEEEecCCHHHH
Confidence            99999999999999999999998755 34  4444666543

>PRK00549 competence damage-inducible protein A; Provisional

Probab=99.83  E-value=1.4e-20  Score=159.37  Aligned_cols=110  Identities=22%  Similarity=0.249  Sum_probs=93.0

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHH-HHHHHHhCCCcCCCceEEEEEEec-CCchhh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNC-LIELLRSGGLSLMEPYTSKSLTTN-LSDLEA   74 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~-l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~I   74 (120)
                      ||.+|+|| ++|+||+..||||.++    +||+|||||. +|+.||++ +.|.|+.- +..+.++.++++++. .+|++|
T Consensus       117 qA~~P~ga-~~l~N~~GtApG~~~~~~~~~i~~lPGvP~-Em~~m~~~~v~p~l~~~-~~~~~~~~~~~l~~~gi~Es~l  193 (414)
T PRK00549        117 QALIPEGA-TVLPNPVGTAPGMIIEVDGKTYIVLPGPPS-ELKPMFEEYVVPYLSSA-KGTGEVLYSRVLRFFGIGESQL  193 (414)
T ss_pred             hhcCCCCC-EECcCCCCcCCeEEEEECCEEEEEeCCCcH-HHHHHHHHHhHHHHHhh-cCCCceEEEEEEEEcCCCHHHH
Confidence            79999995 8999999999999998    5999999666 68999998 88998731 112357899999765 799999


Q ss_pred             hhhHHHHHHhCCCceeeecccccCCCeEEEEeeecccce
Q 033395           75 AQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSA  113 (120)
Q Consensus        75 A~~L~~i~~~~pdv~IGSYP~~~~g~~~~V~rg~D~~~~  113 (120)
                      ++.|.+++.+|++++||+||++..-.+.++++|.|.+.+
T Consensus       194 ~~~L~~l~~~~~~v~ig~~~~~~~~~vrl~~~~~~~~~~  232 (414)
T PRK00549        194 ATTLRDLIDNQTNPTIAPYAKDGEVTLRLTAKARSEEEA  232 (414)
T ss_pred             HHHHHHHHhcCCCCEEEECccCCEEEEEEEEecCCHHHH
Confidence            999999999999999999998744456778999987654

>PRK01215 competence damage-inducible protein A; Provisional

Probab=99.68  E-value=1.7e-16  Score=128.21  Aligned_cols=109  Identities=17%  Similarity=0.234  Sum_probs=87.6

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHH-HHHHHHhCCCcCCCceEEEEEEec-CCchhh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNC-LIELLRSGGLSLMEPYTSKSLTTN-LSDLEA   74 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~-l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~I   74 (120)
                      ||.+|+|| ++|+|++..||||.+.    +||+|||+|. .++.||+. +.|.|+.  + .+..+.++++++. .+|++|
T Consensus       120 ~A~~P~ga-~~l~N~~Gtapg~~~~~~~~~i~~LPG~P~-e~~~m~~~~v~p~l~~--~-~~~~~~~~~~~~~Gi~Es~l  194 (264)
T PRK01215        120 MAMMPPGA-VPLENPVGTAPGILIEHGGKDIVALPGVPR-EMEAIFENFVEPLLKN--R-PPLKYYEDSILVEGVMESDL  194 (264)
T ss_pred             eeeCCCCC-EecCCCCCcCCeEEEEECCEEEEEeCCChH-HHHHHHHHHHHHHHhc--c-CCCcEEEEEEEECCCCHHHH
Confidence            68999995 7999999999999885    5999999666 68889998 7799875  2 2357889999976 799999


Q ss_pred             hhhHHHHHHhCCCceeeeccc-c--cCCC--eEEEEeeeccccee
Q 033395           75 AQPLSKLCLEFPDLHIGCYRK-S--RQGP--LIISFEGKVKDSAT  114 (120)
Q Consensus        75 A~~L~~i~~~~pdv~IGSYP~-~--~~g~--~~~V~rg~D~~~~~  114 (120)
                      |+.|.++..+||++.|||||. +  ..+.  +.++.+|.|.+.+.
T Consensus       195 ~~~l~~l~~~~~~~~~~s~p~~~~~~~~~v~vrl~~~~~~~~~~~  239 (264)
T PRK01215        195 APYVKELVKKYDRVYVKSHPKGYEVSKPILEIQIAGSGEREEEAK  239 (264)
T ss_pred             HHHHHHHHHhCCCCEEecCccceecCCCeEEEEEEEecCCHHHHH
Confidence            999999999999999999965 2  2333  44466677665543

>PRK03673 hypothetical protein; Provisional

Probab=99.63  E-value=1.6e-15  Score=129.07  Aligned_cols=106  Identities=22%  Similarity=0.139  Sum_probs=84.9

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHH-HHHHHHhCCCcCCCceEEEEEEec-CCchhh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNC-LIELLRSGGLSLMEPYTSKSLTTN-LSDLEA   74 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~-l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~I   74 (120)
                      ||.+|+|| ++|+||+..||||.++    +||+|||||. +|+.||+. +.|.|+.- +.....+.++++.+. .+|+++
T Consensus       118 QA~~P~ga-~~l~N~~GtApG~~~~~~~~~i~~LPGvP~-Emk~M~~~~v~p~L~~~-~~~~~~~~~~~l~~~Gi~ES~l  194 (396)
T PRK03673        118 QAELPASA-EMIDNPVGTACGFALQLNRCLMFFTPGVPS-EFKVMVEQEILPRLRER-FSLPEPPLCLRLTTFGRSESDL  194 (396)
T ss_pred             hccCCCCC-eeccCCCccCCcEEEEECCEEEEEECCChH-HHHHHHHHHHHHHHHhh-cCCCCceEEEEEEECCCCHHHH
Confidence            69999995 8999999999999996    3999999666 68999987 99998851 121245778888764 799999


Q ss_pred             hhhHHHHHHhCCCceeeecccccCCCeEEEEeeecc
Q 033395           75 AQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVK  110 (120)
Q Consensus        75 A~~L~~i~~~~pdv~IGSYP~~~~g~~~~V~rg~D~  110 (120)
                      ++.|.+++ ..+++.||-|+.+..-.+.++.++.|.
T Consensus       195 ~~~l~~l~-~~~~~~i~~~~~~~~v~vrlt~~~~~~  229 (396)
T PRK03673        195 AQSLDPLP-LPPGVVMGYRSSMPIIELKLTGPASQR  229 (396)
T ss_pred             HHHHHHHh-cCCCCEEeecCCCCeEEEEEEEccCCH
Confidence            99999997 457999998877754456667777765

>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain

Probab=99.53  E-value=4.8e-14  Score=120.26  Aligned_cols=110  Identities=18%  Similarity=0.115  Sum_probs=89.5

Q ss_pred             CCCCCCcccccccCCCCCCCeeEE-C--c--EEEecCCChhHHHHHHHH-HHHHHHhCCCcCCCceEEEEEEec-CCchh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKC-Q--N--VIILTATNVTELDKEWNC-LIELLRSGGLSLMEPYTSKSLTTN-LSDLE   73 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i-~--N--V~VmAGvpvP~i~aMl~~-l~p~L~~G~L~~G~p~~S~tv~~~-~~Eg~   73 (120)
                      ||.+|+|| ++|+||+..||||.+ .  |  ||.|||+|. +++.||+. +.|.|+.- +.....+.++++++. .+|++
T Consensus       117 qA~~p~ga-~~l~N~~G~APG~~~~~~~~~~i~~LPG~P~-e~~~m~~~~v~p~l~~~-~~~~~~~~~~~~~~~Gi~ES~  193 (413)
T TIGR00200       117 QALLPAGA-EFLANPVGTAPGMFAVQLNRCLMLFTPGVPS-EFRVMVEHEALPRLRER-FSLPQPIVSLVLRFFGIGESQ  193 (413)
T ss_pred             hcCCCCCC-EECCCCCCCCCeeEEEecCCEEEEEeCCCcH-HHHHHHHHHhhHHHHHh-cCCCceEEEEEEEECCCCHHH
Confidence            79999995 899999999999544 3  4  677999777 78999988 78998751 112246889999876 79999


Q ss_pred             hhhhHHHHHHhCCCceeeecccccCCCeEEEEeeecccce
Q 033395           74 AAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKVKDSA  113 (120)
Q Consensus        74 IA~~L~~i~~~~pdv~IGSYP~~~~g~~~~V~rg~D~~~~  113 (120)
                      +++.|.++..++++..++-|+++.+-.+.++.++.|.+.+
T Consensus       194 l~~~l~~~~~~~~~~~~~~~~~~~~v~vrl~~~~~~~~~a  233 (413)
T TIGR00200       194 LEADLADSLDTLTNPTGAPMAYRGEVPLRELKLTGPESEQ  233 (413)
T ss_pred             HHHHHHHHHhcCCCCeEEEecCCCeEEEEEEEecCCHHHH
Confidence            9999999999999999999998866677778888876654

cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species

>cd00885 cinA Competence-damaged protein

Probab=99.11  E-value=7e-11  Score=89.80  Aligned_cols=49  Identities=29%  Similarity=0.391  Sum_probs=43.4

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHH-HHHHHHHh
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWN-CLIELLRS   51 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~-~l~p~L~~   51 (120)
                      ||.+|+|+ ++|.|++..||||.++    |||+|||+|. +|++||+ .+.|.|+.
T Consensus       116 ~a~~p~ga-~~i~N~~G~apg~~~~~~~~~i~~lPG~P~-e~~~m~~~~~~~~l~~  169 (170)
T cd00885         116 QAMLPEGA-TLLPNPVGTAPGFSVEHNGKNVFLLPGVPS-EMKPMLEEEVLPRLRE  169 (170)
T ss_pred             eecCCCCC-EECcCCCCEeeEEEEEeCCeEEEEECCChH-HHHHHHHHHHHHHHhc
Confidence            79999995 8999999999999999    8999999555 5899999 68888753

CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.

>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity

Probab=86.84  E-value=0.39  Score=34.62  Aligned_cols=35  Identities=26%  Similarity=0.178  Sum_probs=24.4

Q ss_pred             CCCCCCeeEEC-----cEEEecCCChhHHHHHHHHHH-HHHH
Q 033395           15 DKLLLPLIKCQ-----NVIILTATNVTELDKEWNCLI-ELLR   50 (120)
Q Consensus        15 pvs~APGf~i~-----NV~VmAGvpvP~i~aMl~~l~-p~L~   50 (120)
                      |...++++.++     .||.|||.|+ ....|++.++ |.|+
T Consensus       103 p~~~~~~~~~~~~~~~~v~~LPG~P~-~~~~~~~~~v~P~L~  143 (144)
T PF00994_consen  103 PTGLAPGAYLSRKGGKPVFGLPGNPV-AAKVMLEVLVLPLLR  143 (144)
T ss_dssp             TCETEGGGGGTSSETTEEEEE-SSHH-HHHHHHHHHHHHHHH
T ss_pred             ccceeeEEEeeCCCCcEEEEcCCCHH-HHHHHHHHHHHHhcC
Confidence            44456776665     5999999555 4677888887 8875

The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
3kbq_A	172	Protein TA0487; structural genomics, CINA, protein	99.31
1uuy_A	167	CNX1, molybdopterin biosynthesis CNX1; chelatase,	86.77
3iwt_A	178	178AA long hypothetical molybdenum cofactor biosy	82.6

>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}

Probab=99.31  E-value=7.6e-13  Score=100.40  Aligned_cols=48  Identities=21%  Similarity=0.288  Sum_probs=43.2

Q ss_pred             CCCCCCcccccccCCCCCCCeeEEC----cEEEecCCChhHHHHHHHHHHHHHH
Q 033395            1 MALLPEGTTELLHHDKLLLPLIKCQ----NVIILTATNVTELDKEWNCLIELLR   50 (120)
Q Consensus         1 MAriPeGaa~LI~npvs~APGf~i~----NV~VmAGvpvP~i~aMl~~l~p~L~   50 (120)
                      ||.+|+|| ++|+||+..||||.++    |||+|||||. +|+.||+.+.|+|.
T Consensus       118 ~A~~P~ga-~~l~N~~g~apG~~~~~~~~~v~~lPGvP~-e~~~m~~~~~~~~~  169 (172)
T 3kbq_A          118 MAKIPPSC-RPIENPVGTAPGLICAVGGKKVIILPGVPK-EMEALLKAMEKDII  169 (172)
T ss_dssp             GGEECTTE-EEECCSSSSSCEEEEEETTEEEEEECSSHH-HHHHHHHHTHHHHC
T ss_pred             hccCCCCC-EECcCCCCcCCeEEEEECCeEEEEeCCCHH-HHHHHHHHHHhhcC
Confidence            89999995 8999999999999998    8999999555 57899999999974

>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A

Probab=86.77  E-value=0.71  Score=33.28  Aligned_cols=39  Identities=13%  Similarity=0.119  Sum_probs=27.7

Q ss_pred             cccCCCC--CCCeeEECc--EEEecCCChhHHHHHHHHHHHHHHh
Q 033395           11 LLHHDKL--LLPLIKCQN--VIILTATNVTELDKEWNCLIELLRS   51 (120)
Q Consensus        11 LI~npvs--~APGf~i~N--V~VmAGvpvP~i~aMl~~l~p~L~~   51 (120)
                      ..+|...  .++|+ ++|  ||.|||.|+ ....||+.++|.|+.
T Consensus       115 ~~Pg~~~sr~~~G~-~~~~~v~~LPG~P~-s~~~~~~~~~P~L~~  157 (167)
T 1uuy_A          115 ITPFAMLARSAAGI-RGSTLIINMPGNPN-AVAECMEALLPALKH  157 (167)
T ss_dssp             HCGGGGGCCCCEEE-ETTEEEEEECSSTT-HHHHHHHHHHHHHHH
T ss_pred             cCCCCcccceeEEE-ECCEEEEECCCCHH-HHHHHHHHHHHHHHH
Confidence            3444432  47787 466  899999777 677788888888754

>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}

Probab=82.60  E-value=0.87  Score=32.76  Aligned_cols=24  Identities=8%  Similarity=0.134  Sum_probs=18.3

Q ss_pred             EEEecCCChhHHHHHHH-HHHHHHHh
Q 033395           27 VIILTATNVTELDKEWN-CLIELLRS   51 (120)
Q Consensus        27 V~VmAGvpvP~i~aMl~-~l~p~L~~   51 (120)
                      ||.|||+|+ .++.||+ -|.|.|+-
T Consensus       147 i~~LPG~P~-~~~~~~~~~v~P~L~h  171 (178)
T 3iwt_A          147 VYLLPGSPD-AVKLALKELILPEVGH  171 (178)
T ss_dssp             EEEECSCHH-HHHHHHHHTHHHHHHH
T ss_pred             EEECCCCHH-HHHHHHHHHHHHHHHH
Confidence            788999666 6788886 47888753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1uuya_	161	Plant CNX1 G domain {Mouse-ear cress (Arabidopsis	87.65

>d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Molybdenum cofactor biosynthesis proteins
superfamily: Molybdenum cofactor biosynthesis proteins
family: MogA-like
domain: Plant CNX1 G domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.65  E-value=0.43  Score=33.02  Aligned_cols=33  Identities=9%  Similarity=0.020  Sum_probs=25.5

Q ss_pred             CCCCeeEECc--EEEecCCChhHHHHHHHHHHHHHH
Q 033395           17 LLLPLIKCQN--VIILTATNVTELDKEWNCLIELLR   50 (120)
Q Consensus        17 s~APGf~i~N--V~VmAGvpvP~i~aMl~~l~p~L~   50 (120)
                      |.+-++.++|  ||.|||.|+ .+..+|+.|+|.|+
T Consensus       120 sR~~~g~~~~~~if~LPG~P~-a~~~~l~~i~p~l~  154 (161)
T d1uuya_         120 ARSAAGIRGSTLIINMPGNPN-AVAECMEALLPALK  154 (161)
T ss_dssp             CCCCEEEETTEEEEEECSSTT-HHHHHHHHHHHHHH
T ss_pred             cccceeeECCEEEEECCCCHH-HHHHHHHHHHHHHH
Confidence            3456677888  899999666 57778899999875