Citrus Sinensis ID: 033399

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MLYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
ccEEEccHHHHHHHHHHHHccccEEccccccccccccEEEEEEccEEEEEEEcccccccccccccccccccEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccEEcccccccccccccccccEEEEEcccEEEEEEcccccccccccccccccccEEEEEccHHHHHHHHHHccccEEEcccccEEEEEEcccccEEEEEEEcc
Coil and Loop (DISEMBL)
MLYKYKRKKREINKHQRFNLLGleinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
mlykykrkkreinkhqrfnllgleinearphdklPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MLYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
***************QRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
*LYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
********KREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
MLYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG***HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
449489903	206	PREDICTED: uncharacterized LOC101203815	0.883	0.514	0.905	1e-51
449452528	175	PREDICTED: uncharacterized protein LOC10	0.883	0.605	0.905	1e-51
388493084	200	unknown [Lotus japonicus]	0.841	0.505	0.930	2e-51
224142861	199	predicted protein [Populus trichocarpa]	0.841	0.507	0.910	2e-50
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.833	0.507	0.92	2e-50
297796591	196	lactoylglutathione lyase family protein	0.833	0.510	0.92	2e-50
356547897	209	PREDICTED: uncharacterized protein LOC10	0.908	0.521	0.837	9e-50
226495911	193	glyoxalase/bleomycin resistance protein/	0.833	0.518	0.91	1e-49
359807103	206	uncharacterized protein LOC100805881 [Gl	0.85	0.495	0.892	3e-49
358347730	129	Glyoxalase/bleomycin resistance protein/	0.908	0.844	0.828	3e-49

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  206 bits (525), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/106 (90%), Positives = 100/106 (94%)

Query: 15  HQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI 74
           H   N+LGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC+
Sbjct: 101 HFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTCL 160

Query: 75  AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 120
            IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 161 GIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  206 bits (525), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/106 (90%), Positives = 100/106 (94%)

Query: 15  HQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI 74
           H   N+LGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC+
Sbjct: 70  HFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTCL 129

Query: 75  AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 120
            IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 130 GIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  206 bits (523), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/101 (93%), Positives = 100/101 (99%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           N+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRD
Sbjct: 99  NVLGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRD 158

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 119
           VSKLK ILDKAGISYTLS+SGRPAIFTRDPDANALEFTQ+D
Sbjct: 159 VSKLKAILDKAGISYTLSRSGRPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142861|ref|XP_002324754.1| predicted protein [Populus trichocarpa] gi|222866188|gb|EEF03319.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/101 (91%), Positives = 99/101 (98%)

Query: 20  LLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV 79
           +LGLEINE RPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRHTCIAI+DV
Sbjct: 99  ILGLEINEERPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCIAIQDV 158

Query: 80  SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 120
           SKLK+ILDKAGI YTLS+SGRPAIFTRDPDANALEF+QVDG
Sbjct: 159 SKLKVILDKAGIPYTLSRSGRPAIFTRDPDANALEFSQVDG 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  202 bits (514), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 97/100 (97%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           N+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRD
Sbjct: 98  NILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRD 157

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 118
           VS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 158 VSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  202 bits (514), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 97/100 (97%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           N+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRD
Sbjct: 97  NILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRD 156

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 118
           VS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 157 VSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  200 bits (508), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 93/111 (83%), Positives = 104/111 (93%), Gaps = 2/111 (1%)

Query: 9   KREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 68
           +R ++ +Q  N+LGL+INEARPH+KLPYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGR
Sbjct: 100 ERSLDFYQ--NVLGLKINEARPHNKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGR 157

Query: 69  DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 119
           DRHTCIAIRDVSKLK I DKAGI+YTLS SGRPAIFTRDPDANALEFTQVD
Sbjct: 158 DRHTCIAIRDVSKLKAIFDKAGIAYTLSHSGRPAIFTRDPDANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495911|ref|NP_001147026.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays] gi|195606588|gb|ACG25124.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  199 bits (507), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 91/100 (91%), Positives = 96/100 (96%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           N+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRD
Sbjct: 94  NILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRD 153

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 118
           VS LK ILDKAGI+YT+SKSGRPAIFTRDPD NALEFTQV
Sbjct: 154 VSVLKEILDKAGIAYTMSKSGRPAIFTRDPDTNALEFTQV 193

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  199 bits (505), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/102 (89%), Positives = 96/102 (94%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           N+LGL+INEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRD
Sbjct: 105 NVLGLKINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRD 164

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 120
           VSKLK I DKAGI YTLS SGRPAIF RDPDANALEFTQVDG
Sbjct: 165 VSKLKAIFDKAGIPYTLSHSGRPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347730|ref|XP_003637907.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula] gi|355503842|gb|AES85045.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula]

 Score =  198 bits (504), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/111 (82%), Positives = 104/111 (93%), Gaps = 2/111 (1%)

Query: 9   KREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 68
           +R ++ +Q  N+LGL+INEARPHDKLPYRG WLWVG+EMIHLMELPNPDPL+GRP+HGGR
Sbjct: 20  ERSLDFYQ--NVLGLKINEARPHDKLPYRGTWLWVGSEMIHLMELPNPDPLTGRPQHGGR 77

Query: 69  DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 119
           DRHTCIAIRDVSKLK ILDKAG+ YTLS+SGRPAIFTRDPDANALEFTQ+D
Sbjct: 78  DRHTCIAIRDVSKLKAILDKAGVPYTLSRSGRPAIFTRDPDANALEFTQID 128

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.9	0.548	0.854	2.3e-48
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.883	0.828	0.289	1.9e-05
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.825	0.592	0.283	1.9e-05
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.9	0.620	0.273	3.7e-05

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 94/110 (85%), Positives = 102/110 (92%)

Query:     9 KREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 68
             +R +  +Q  N+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGR
Sbjct:    90 ERSLEFYQ--NILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGR 147

Query:    69 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 118
             DRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct:   148 DRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 33/114 (28%), Positives = 52/114 (45%)

Query:    11 EINKHQRFNLLGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGR 68
             E++K     +LG + INE    ++  Y+   L VG E  I L   PNP      PE  G 
Sbjct:    17 EVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPPKRPSFPEAAGL 75

Query:    69 DRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV 118
              RH   A+ ++ +    L + G+     +    +G+  +F +DPD   LE  +V
Sbjct:    76 -RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPLELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 30/106 (28%), Positives = 47/106 (44%)

Query:    19 NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
             N+LG  +   RP D   + GAWL+     IHL++ P P+ L  + E   +D H       
Sbjct:    33 NVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEPEKLLKKTEINPKDNHISFQCES 90

Query:    79 VSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDANALEFTQVD 119
             +  ++  L +  I Y    + + G     +F  DPDA  +E    D
Sbjct:    91 MEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAFMIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 32/117 (27%), Positives = 51/117 (43%)

Query:    10 REINKHQRF--NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG 67
             R +++   F   +LG  I   RP + L + GAWL+     IHL+  P P+ L  +     
Sbjct:    22 RSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEPEKLPKKTAINP 79

Query:    68 RDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDANALEFTQVD 119
             +D H       +  ++  L++ GI Y   L + G      +F  DPD   +E    D
Sbjct:    80 KDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFMIEICNCD 136


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.139   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120       120   0.00091  102 3  11 22  0.36    31
                                                     29  0.48    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  131 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.34u 0.23s 11.57t   Elapsed:  00:00:01
  Total cpu time:  11.34u 0.23s 11.57t   Elapsed:  00:00:01
  Start:  Sat May 11 02:00:43 2013   End:  Sat May 11 02:00:44 2013

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	120
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	3e-23
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-05
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-04

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 86.1 bits (214), Expect = 3e-23
 Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR 77
           ++LGLE     P     + GAWL+ G    +HL+E   PD L   PE  GRD H    + 
Sbjct: 20  DVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVD 73

Query: 78  DVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 115
           D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 74  DLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 15/116 (12%)

Query: 10  REINKHQRF--NLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 65
            ++   + F  ++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 66  GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 115
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           ++LG ++ E     + P R A+   G  ++ L+    P P +              ++ D
Sbjct: 21  DVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPAAAGFGGHHI-AFIAFSVDD 79

Query: 79  VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 115
           V      L  AG+           G    + RDPD N +E 
Sbjct: 80  VDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
PLN02367	233	lactoylglutathione lyase	99.83
PRK10291	129	glyoxalase I; Provisional	99.82
PRK11478	129	putative lyase; Provisional	99.81
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.81
PLN03042	185	Lactoylglutathione lyase; Provisional	99.79
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.79
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.79
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.78
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.78
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.77
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.76
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.76
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.76
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.74
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.74
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.74
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.73
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.73
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.73
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.73
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.73
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.72
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.72
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.72
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.71
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.71
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.7
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.7
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.69
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.69
PLN02300	286	lactoylglutathione lyase	99.69
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.69
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.68
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.68
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.68
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.68
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.68
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.68
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.67
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.67
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.67
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.66
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.66
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.66
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.65
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.65
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.65
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.65
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.64
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.64
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.64
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.64
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.64
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.64
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.63
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.63
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.63
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.63
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.62
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.62
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.62
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.62
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.61
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.6
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.56
PRK06724	128	hypothetical protein; Provisional	99.55
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.55
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.54
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.52
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.51
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.5
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.5
PLN02300	286	lactoylglutathione lyase	99.48
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.46
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.44
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.43
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.36
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.27
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.25
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.96
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.95
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.89
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.83
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.77
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.75
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.6
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.59
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.45
PRK10148	147	hypothetical protein; Provisional	98.34
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.17
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	97.93
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.75
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.72
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	97.55
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.42
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.41
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.34
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	96.98
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.57
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	96.43
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	95.69
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	95.2
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	95.16
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	95.07
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	94.89
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	94.85
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	94.61
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	94.41
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.32
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	94.24
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	94.18
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	94.0
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	93.65
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	93.65
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	93.61
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	93.49
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	93.35
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	93.15
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	92.98
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	92.6
PLN03042	185	Lactoylglutathione lyase; Provisional	91.87
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	91.42
PF15067	236	FAM124: FAM124 family	91.37
PRK11478	129	putative lyase; Provisional	91.35
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	90.98
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	90.68
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	90.31
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	90.15
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	89.84
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	89.59
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	88.84
PLN02367	233	lactoylglutathione lyase	87.51
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	87.49
cd04895	72	ACT_ACR_1 ACT domain-containing protein which is c	87.44
cd03012	126	TlpA_like_DipZ_like TlpA-like family, DipZ-like su	87.15
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	85.43
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	84.88
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	84.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	84.55
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	84.31
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	83.78
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	83.74
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	83.66
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	82.95
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	82.78
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	82.02
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	81.61
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	81.56
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	80.92
PRK04101	139	fosfomycin resistance protein FosB; Provisional	80.77
COG1225	157	Bcp Peroxiredoxin [Posttranslational modification,	80.66
PRK09437	154	bcp thioredoxin-dependent thiol peroxidase; Review	80.66

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=3.7e-19  Score=121.49  Aligned_cols=114  Identities=18%  Similarity=0.262  Sum_probs=79.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe------------------C-CeEEEEEecCCCC--CC----
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV------------------G-AEMIHLMELPNPD--PL----   59 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~------------------g-~~~i~l~~~~~~~--~~----   59 (120)
                      .|-+|.+.+.+||+++|||++.........++..+++..                  + +..|+|+...+.+  +.    
T Consensus        81 lRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~~~~~~y  160 (233)
T PLN02367         81 YRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKGY  160 (233)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCccccchhc
Confidence            467889999999999999998532211113445555532                  2 2478887643322  10    


Q ss_pred             -CCCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeC
Q 033399           60 -SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        60 -~~~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                       .++.. ..+.+||||.|+|+++++++|+++|+++...+   .+.+.+||+|||||+|||+|..
T Consensus       161 ~~gn~~-p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        161 HNGNSE-PRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             ccCCCC-CCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence             01111 13579999999999999999999999998743   2246789999999999999864

>PRK10291 glyoxalase I; Provisional

Probab=99.82  E-value=3.5e-19  Score=112.07  Aligned_cols=109  Identities=19%  Similarity=0.237  Sum_probs=74.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      +-+|.+.+.+||.++|||++....+.....+..+|+..++.    .+++.... +.   ......++.+|+||.|+|+++
T Consensus         3 ~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~---~~~~~g~~~~hlaf~V~d~~~   78 (129)
T PRK10291          3 RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW-GV---DKYELGTAYGHIALSVDNAAE   78 (129)
T ss_pred             EecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecC-CC---CCCcCCCCeeEEEEEeCCHHH
Confidence            34678889999999999998533222123445566665542    24443211 11   111112356899999999999


Q ss_pred             HHHHHHHCCCeEEec----CCC-ccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...    +++ .+.+||+|||||.|||++.
T Consensus        79 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         79 ACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999998752    234 4568899999999999985

>PRK11478 putative lyase; Provisional

Probab=99.81  E-value=1.6e-18  Score=108.61  Aligned_cols=111  Identities=20%  Similarity=0.279  Sum_probs=75.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      .-.|.+.+.+||.++|||++...........-...+.+ ++..++|++.+.+......+. ..+..|+||.|+|++++++
T Consensus        13 ~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~g~~hi~f~v~d~~~~~~   91 (129)
T PRK11478         13 IATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPE-ACGLRHLAFSVDDIDAAVA   91 (129)
T ss_pred             EcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCC-CCceeEEEEEeCCHHHHHH
Confidence            34678889999999999998522111001100112333 345788876543221111112 2346899999999999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        92 ~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         92 HLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             HHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            999999998652    356788999999999999987

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.81  E-value=6.4e-19  Score=112.02  Aligned_cols=112  Identities=11%  Similarity=-0.058  Sum_probs=77.5

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCC-CC-CCCCCCCcceEEEEECCHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL-SG-RPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~-~~-~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      -.|.+.+.+||.++|||++......  .+....++..++..+.|......... .. ......+..|+||.|+|++++++
T Consensus         8 V~D~e~s~~FY~~vLGf~~~~~~~~--~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dvda~~~   85 (136)
T cd08342           8 VGNAKQLASWFSTKLGFEPVAYHGS--EDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDAAAAYE   85 (136)
T ss_pred             eCCHHHHHHHHHHhcCCeEEEecCC--CceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCHHHHHH
Confidence            3577889999999999999532211  11222334445556766543221110 00 01122356899999999999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +|+++|+++...    +++.+.+|++|||||+|||++..|
T Consensus        86 ~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          86 RAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             HHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            999999999763    466789999999999999999765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.9e-18  Score=109.23  Aligned_cols=113  Identities=18%  Similarity=0.215  Sum_probs=77.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCC-CC----------CCceeEEEEe--CCeEEEEEecCCCCCCC---CCCCCCCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPH-DK----------LPYRGAWLWV--GAEMIHLMELPNPDPLS---GRPEHGGR   68 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~-~~----------~~~~~~~l~~--g~~~i~l~~~~~~~~~~---~~~~~~~~   68 (120)
                      +.-.|.+.+.+||.+ |||++...... +.          .....+++..  ++..|+|++...+....   .......+
T Consensus         9 i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~~~~~g   87 (142)
T cd08353           9 IVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAPVNALG   87 (142)
T ss_pred             EEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCCCCCCC
Confidence            455788999999998 99998522110 00          0112233443  34589998754332211   11122335


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+|+||.|+|+++++++|+++|+++...    .++.+.+||+|||||+|||+|.
T Consensus        88 ~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          88 LRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             ceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            6899999999999999999999998763    3567899999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.79  E-value=4.4e-18  Score=113.46  Aligned_cols=114  Identities=16%  Similarity=0.178  Sum_probs=76.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-------------------CCeEEEEEecCCCCC------CC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPDP------LS   60 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-------------------g~~~i~l~~~~~~~~------~~   60 (120)
                      +=+|.+.+.+||+++|||++..........+..+++..                   ++..|+|+.......      ..
T Consensus        34 ~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~  113 (185)
T PLN03042         34 RIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYH  113 (185)
T ss_pred             eeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcccccccccc
Confidence            45788999999999999998532121112333344432                   234788886432211      00


Q ss_pred             CCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeC
Q 033399           61 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        61 ~~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      .......+..|+||.|+|+++++++|+++|+++...+   .+.+.+||+|||||+|||++..
T Consensus       114 ~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        114 NGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            0011113578999999999999999999999997632   2356788999999999999853

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=2.7e-18  Score=106.55  Aligned_cols=110  Identities=20%  Similarity=0.195  Sum_probs=75.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d~   81 (120)
                      .-+|.+.++.||.++|||++.........++...|+..++ ..++|++.+...+.. ......+..|+||.|+   |+++
T Consensus         8 ~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~~~~~v~~   86 (125)
T cd07241           8 WTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVGSKEAVDE   86 (125)
T ss_pred             EecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECCCHHHHHH
Confidence            3467888999999999999842211111234456777754 578887643322111 1111234689999996   4899


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEE
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++|+++|+++...    .+|.+.++|+|||||.|||.
T Consensus        87 ~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          87 LTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             HHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence            999999999998763    34556788999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=9.4e-18  Score=104.31  Aligned_cols=112  Identities=17%  Similarity=0.140  Sum_probs=77.0

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|.+.+.+||.++||+++....+........+.+.+++..+.+................+...|++|.|+|+++++++|
T Consensus         7 v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~~~~l   86 (122)
T cd08355           7 YRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAHYERA   86 (122)
T ss_pred             ECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHHHHHH
Confidence            36888999999999999996322121111223446667766767543322111000111223469999999999999999


Q ss_pred             HHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           87 DKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        87 ~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++...    ++|.+.++|+|||||+|+|.++
T Consensus        87 ~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          87 RAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            9999998753    4788899999999999999763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.78  E-value=9.6e-18  Score=109.73  Aligned_cols=114  Identities=18%  Similarity=0.134  Sum_probs=77.4

Q ss_pred             eccchhhhhhhhhhccCceEecc----CCC----CC----------CCceeEEEEeCC-eEEEEEecCCCCCCCCCC-CC
Q 033399            6 KRKKREINKHQRFNLLGLEINEA----RPH----DK----------LPYRGAWLWVGA-EMIHLMELPNPDPLSGRP-EH   65 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~----~~~----~~----------~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~-~~   65 (120)
                      .-.|.+.+.+||+++|||++..+    .+.    +.          .....+++..++ ..|+|++..++....... ..
T Consensus        11 ~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~~~~~~~~~   90 (162)
T TIGR03645        11 SVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQENPEDNFEYW   90 (162)
T ss_pred             EeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCCCCcccccc
Confidence            34678889999999999988421    010    00          113345566554 479999865433211111 11


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEEec------C--CCccEEEEeCCCCCeEEEEeeC
Q 033399           66 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS------K--SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        66 ~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~------~--~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ..+..|+||.|+|+++++++|+++|+++...      +  .+.+.+||+|||||.|||++..
T Consensus        91 ~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        91 KTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             cccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            2357899999999999999999999876431      1  1247899999999999999853

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=5.9e-18  Score=105.08  Aligned_cols=106  Identities=14%  Similarity=0.017  Sum_probs=67.7

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|-+.+++||.++|||++....     +. .+.+ .++..+++................+...|++|.|+|+++++++|
T Consensus        10 v~D~~~a~~FY~~~lG~~~~~~~-----~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd~~~~~l   82 (120)
T cd09011          10 VKDIEKSKKFYEKVLGLKVVMDF-----GE-NVTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFDAFLDKL   82 (120)
T ss_pred             ECCHHHHHHHHHHhcCCEEeecc-----Cc-eEEE-eccceeccchhhhccCCcccccccCCceEEEEEehhhHHHHHHH
Confidence            35778888899999999984211     11 1112 12223322111000000011111223479999999999999999


Q ss_pred             HHCCC-eEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           87 DKAGI-SYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        87 ~~~Gv-~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+ ++..    .++|.+.+||+|||||+|||.+.+
T Consensus        83 ~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~~  120 (120)
T cd09011          83 KRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGESM  120 (120)
T ss_pred             HhcCCcEEecCcccCCCccEEEEEECCCCCEEEEeccC
Confidence            99985 6654    257889999999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.8e-17  Score=100.64  Aligned_cols=104  Identities=38%  Similarity=0.690  Sum_probs=77.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      ...+-+.+++||.++||+++. .++.  .....+|+..++. .++|...+...+.   +...++..|++|.|+|++++++
T Consensus         7 ~v~d~~~~~~FY~~~lG~~~~-~~~~--~~~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d~~~~~~   80 (114)
T cd07245           7 RVPDLEASRAFYTDVLGLEEG-PRPP--FLFPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDDLDAFRA   80 (114)
T ss_pred             ecCCHHHHHHHHHHccCCccc-CcCC--CCCCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCCHHHHHH
Confidence            346788899999999999984 4433  1224478888765 7888765433211   1122345799999999999999


Q ss_pred             HHHHCCCeEEecC---CCccEEEEeCCCCCeEEE
Q 033399           85 ILDKAGISYTLSK---SGRPAIFTRDPDANALEF  115 (120)
Q Consensus        85 ~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl  115 (120)
                      +|+++|+++...+   ++.+++++.||+||+|||
T Consensus        81 ~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          81 RLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999987742   566889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.5e-17  Score=100.70  Aligned_cols=108  Identities=19%  Similarity=0.089  Sum_probs=76.5

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILD   87 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l~   87 (120)
                      .|.+.+.+||.++||+++.............+.+..++..+.+........ .. ....+...|++|.|+|++++++++.
T Consensus        10 ~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~v~d~~~~~~~l~   87 (122)
T cd07246          10 RDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG-SP-ASWGGTPVSLHLYVEDVDATFARAV   87 (122)
T ss_pred             CCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC-CC-CCCCCceEEEEEEeCCHHHHHHHHH
Confidence            488899999999999999633221111222344666777777765322111 00 1112234799999999999999999


Q ss_pred             HCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           88 KAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        88 ~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++|+++..+    .+|.+.++|+|||||+|||.|
T Consensus        88 ~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          88 AAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            999998663    467889999999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=3.9e-17  Score=101.09  Aligned_cols=110  Identities=22%  Similarity=0.281  Sum_probs=74.4

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      -.|.+.+.+||.++|||++...........-...+.. ++..++|+...........+. ..+..|++|.|+|+++++++
T Consensus        11 v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~-~~g~~h~~~~v~d~~~~~~~   89 (125)
T cd08352          11 CSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPE-ACGLRHLAFSVEDIEAAVKH   89 (125)
T ss_pred             cCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCc-CCCceEEEEEeCCHHHHHHH
Confidence            4678888999999999999532111101111122333 445778776443221111122 23468999999999999999


Q ss_pred             HHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           86 LDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        86 l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      |+++|+++...    ..+.+.+|++||+||+|||+|
T Consensus        90 l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          90 LKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             HHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999998652    346678999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.76  E-value=1.1e-17  Score=104.39  Aligned_cols=112  Identities=17%  Similarity=0.297  Sum_probs=77.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCC-CCCC-CCCCCCCcceEEEEECCHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-PLSG-RPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~-~~~~-~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      .-+|.+.++.||.++|||++....+....+...+++..++..++|+...... +... .....++.+|+||.|+|+++++
T Consensus         8 ~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v~di~~~~   87 (128)
T TIGR03081         8 AVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEVDDIEAAL   87 (128)
T ss_pred             EeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEcCCHHHHH
Confidence            4568888999999999999953211111234556677777788887642211 1000 0111235679999999999999


Q ss_pred             HHHHHCCCeEEec-----CCCccEEEE--eCCCCCeEEEEe
Q 033399           84 MILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQ  117 (120)
Q Consensus        84 ~~l~~~Gv~~~~~-----~~g~~~~~~--~DPdGn~iEl~~  117 (120)
                      ++|+++|+++...     .+|.+.+|+  +|||||+|||.|
T Consensus        88 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        88 ETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             HHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999998652     255677777  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=5.9e-17  Score=100.12  Aligned_cols=109  Identities=17%  Similarity=0.195  Sum_probs=75.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      ....+.+.+.+||.++|||++....+........+|+..++    ..+++.......+  . .....+..|++|.|+|++
T Consensus         6 i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~--~-~~~~~~~~~i~~~v~did   82 (121)
T cd07233           6 LRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE--P-YDNGNGFGHLAFAVDDVY   82 (121)
T ss_pred             EEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC--C-cCCCCCeEEEEEEeCCHH
Confidence            45578899999999999999853222211233446666644    3566654322111  1 111224589999999999


Q ss_pred             HHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEE
Q 033399           81 KLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~  116 (120)
                      +++++|+++|+++...+   .+.+.+||+|||||+|||+
T Consensus        83 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          83 AACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            99999999999998742   4567889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.74  E-value=7.8e-17  Score=104.99  Aligned_cols=106  Identities=18%  Similarity=0.247  Sum_probs=75.2

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---   78 (120)
                      ..-.|.+.+++||.++|||++.. +..    ....|+..+   +..|+|++.+....  ..+. .++..|+||.|+|   
T Consensus         7 i~V~Dle~s~~FY~~~LG~~~~~-~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~-~~~l~Hiaf~v~d~~d   78 (157)
T cd08347           7 LTVRDPEATAAFLTDVLGFREVG-EEG----DRVRLEEGGGGPGAVVDVLEEPDQPR--GRPG-AGTVHHVAFRVPDDEE   78 (157)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEe-eeC----CEEEEEecCCCCCCEEEEEeCCCCCC--Cccc-CCceEEEEEECCCHHH
Confidence            45578899999999999999952 221    123344444   45788876432111  1111 2356899999998   


Q ss_pred             HHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...  ..+.+++||+|||||.|||++.
T Consensus        79 vd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~  120 (157)
T cd08347          79 LEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATD  120 (157)
T ss_pred             HHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEEC
Confidence            899999999999986542  2345789999999999999874

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.4e-16  Score=98.37  Aligned_cols=104  Identities=13%  Similarity=0.098  Sum_probs=71.2

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCC-CCCCCCCCCcceEEEEECCHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~-~~~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      -.|.+.+++||.++|||++.. ...     ..+.+..++  ..|.+......... ...+.. +...|++|.|+|+++++
T Consensus         9 v~D~~~s~~FY~~~lG~~~~~-~~~-----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~-~~~~~~~~~v~did~~~   81 (119)
T cd08359           9 TDDLAETADFYVRHFGFTVVF-DSD-----WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQ-GQGLILNFEVDDVDAEY   81 (119)
T ss_pred             ECCHHHHHHHHHHhhCcEEEe-ccC-----cEEEEecCCCceEEEEccCCCCCCcchhcccC-CceEEEEEEECCHHHHH
Confidence            357888999999999999952 211     123344444  34555443221111 011111 22359999999999999


Q ss_pred             HHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           84 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++|+++|+++...    ++|.+.++|+|||||+|||+|
T Consensus        82 ~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          82 ERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999988653    467789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=2.3e-16  Score=96.68  Aligned_cols=108  Identities=19%  Similarity=0.229  Sum_probs=73.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC--C---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG--A---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g--~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~   79 (120)
                      .+..|.+.+++||.++|||++....+. ..+  ..|+.+.  +   ..+++...+...+.  .....++..|++|.|+|+
T Consensus         4 l~v~d~~~~~~fY~~~lG~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           4 LYVDDQDKALAFYTEKLGFEVREDVPM-GGG--FRWVTVAPPGSPETSLVLAPPANPAAM--SGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             EEeCCHHHHHHHHHhccCeEEEEeecc-CCC--cEEEEEeCCCCCeeEEEEeCCCCcccc--ccccCCCceEEEEEehHH
Confidence            456788889999999999999633221 012  2354442  2   34555433322111  111223457999999999


Q ss_pred             HHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEe
Q 033399           80 SKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++++++|+++|+++...+   .+.+.+|++|||||.|||.|
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            999999999999997642   34588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.5e-16  Score=97.44  Aligned_cols=108  Identities=18%  Similarity=0.231  Sum_probs=76.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-HHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-VSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d-~d~~~~   84 (120)
                      ...|.+.+++||.++|||++. .++.  . ....++..++..+++.......... ......+..|+||.|++ ++++++
T Consensus        10 ~v~d~~~s~~Fy~~~lG~~~~-~~~~--~-~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~hi~~~~~~~~~~~~~   84 (125)
T cd07253          10 TVADIEATLDFYTRVLGMEVV-RFGE--E-VGRKALRFGSQKINLHPVGGEFEPA-AGSPGPGSDDLCLITEPPIDELVA   84 (125)
T ss_pred             EecCHHHHHHHHHHHhCceee-cccc--c-CCceEEEeCCEEEEEecCCCccCcC-ccCCCCCCceEEEEecccHHHHHH
Confidence            456889999999999999995 3322  1 1245677777777776533221111 11112346899999975 999999


Q ss_pred             HHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEee
Q 033399           85 ILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        85 ~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|+++|+++...+       ++.+++||+|||||+||+.++
T Consensus        85 ~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          85 HLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             HHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            9999999986521       235789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.73  E-value=7.9e-17  Score=101.86  Aligned_cols=102  Identities=20%  Similarity=0.249  Sum_probs=74.6

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC--HHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--VSKLKM   84 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--~d~~~~   84 (120)
                      .+|-+.+++||.++|||++....+      ..+++.+++..+.+...+.. + ..  ...++.+|+||.|++  ++++++
T Consensus         8 V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~-~-~~--~~~~~~~hiaf~v~~~dld~~~~   77 (131)
T cd08363           8 VSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDI-P-RN--EIRQSYTHIAFTIEDSEFDAFYT   77 (131)
T ss_pred             ECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCC-C-cC--CcCccceEEEEEecHHHHHHHHH
Confidence            467888999999999999953211      23567777777776543321 1 11  112356899999984  999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|+++|+++...    .++.+.+||+|||||+|||.+.
T Consensus        78 ~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~  115 (131)
T cd08363          78 RLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTG  115 (131)
T ss_pred             HHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecC
Confidence            999999998652    2456899999999999999875

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.73  E-value=1.4e-16  Score=98.98  Aligned_cols=99  Identities=24%  Similarity=0.330  Sum_probs=72.8

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|.+.+++||.+ |||++. .+..   . .-+++..++..++|...+...     +.  ....|++|.|+|+++++++|
T Consensus        10 v~Dl~~s~~FY~~-lG~~~~-~~~~---~-~~~~~~~~~~~l~l~~~~~~~-----~~--~~~~~~~~~v~dvd~~~~~l   76 (120)
T cd08350          10 SRDLDATEAFYAR-LGFSVG-YRQA---A-GYMILRRGDLELHFFAHPDLD-----PA--TSPFGCCLRLPDVAALHAEF   76 (120)
T ss_pred             cCCHHHHHHHHHH-cCCEEE-ecCC---C-CEEEEEcCCEEEEEEecCcCC-----CC--CCcceEEEEeCCHHHHHHHH
Confidence            4678899999999 999995 3322   1 223455677788887643211     11  12358999999999999999


Q ss_pred             HHCCCeEE-------ec----CCCccEEEEeCCCCCeEEEEee
Q 033399           87 DKAGISYT-------LS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        87 ~~~Gv~~~-------~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++.       ..    ++|.+.++|+|||||.|||.|.
T Consensus        77 ~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          77 RAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            99999842       11    3788999999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.4e-16  Score=98.34  Aligned_cols=96  Identities=15%  Similarity=0.120  Sum_probs=70.8

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|-+.+++||.+ |||++.... .     ..+++..++..+.|...... .     . . ...|++|.|+|+++++++|
T Consensus         9 v~Dl~~s~~FY~~-LGf~~~~~~-~-----~~~~l~~~~~~l~l~~~~~~-~-----~-~-~~~~~~~~v~did~~~~~l   73 (113)
T cd08356           9 AKDFAESKQFYQA-LGFELEWEN-D-----NLAYFRLGNCAFYLQDYYVK-D-----W-A-ENSMLHLEVDDLEAYYEHI   73 (113)
T ss_pred             cccHHHHHHHHHH-hCCeeEecC-C-----CEEEEEcCCEEEEeecCCCc-c-----c-c-cCCEEEEEECCHHHHHHHH
Confidence            3577889999987 999995322 1     24677777777766432111 0     1 1 2358999999999999999


Q ss_pred             HHCCCeEE------e---cCCCccEEEEeCCCCCeEEEEe
Q 033399           87 DKAGISYT------L---SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        87 ~~~Gv~~~------~---~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++|+++.      .   .++|.+.++|+|||||+|+|.+
T Consensus        74 ~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          74 KALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            99998752      1   2578899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=1.5e-16  Score=102.17  Aligned_cols=104  Identities=14%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCC-CceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH--
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK--   81 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~--   81 (120)
                      .+-+|.+.+..||.++|||++......... .....|+..++. .+.+.....      +  .++.+|+||.|+|+++  
T Consensus        12 l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~------~--~~~~~Hiaf~v~d~~~l~   82 (143)
T cd07243          12 LTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG------P--DGKLHHFSFFLESWEDVL   82 (143)
T ss_pred             EecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC------C--CCCceEEEEEcCCHHHHH
Confidence            466788889999999999997422111001 123457765443 233222110      1  1347899999999887  


Q ss_pred             -HHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEe
Q 033399           82 -LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 -~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~  117 (120)
                       +.++|+++|+++...+     ++.+++||+|||||.|||++
T Consensus        83 ~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          83 KAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             HHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence             5689999999986532     34578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.72  E-value=3.4e-16  Score=95.40  Aligned_cols=103  Identities=26%  Similarity=0.325  Sum_probs=74.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-++.+.+++||.++|||++.....    ....+++..++..++|.......+.    . .....|++|.|+|+++++++
T Consensus         5 ~v~d~~~s~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~   75 (112)
T cd08349           5 PVSDIERSLAFYRDVLGFEVDWEHP----EPGYAFLSRGGAQLMLSEHDGDEPV----P-LGRGGSVYIEVEDVDALYAE   75 (112)
T ss_pred             EECCHHHHHHHHHhccCeEEEEEcC----CCcEEEEEeCCEEEEEeccCCCCCC----C-CCCcEEEEEEeCCHHHHHHH
Confidence            3467889999999999999953221    1223456666677877654332110    1 12346999999999999999


Q ss_pred             HHHCCCe-EEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           86 LDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        86 l~~~Gv~-~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      |+++|++ +...    .++.+.++++||+||.|||+|
T Consensus        76 l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          76 LKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            9999998 4432    366789999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.72  E-value=2.6e-16  Score=100.32  Aligned_cols=103  Identities=19%  Similarity=0.239  Sum_probs=75.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~~   83 (120)
                      .-.|-+.+++||.++|||++. .+.     ...+++..++..+.+...+.. +   .....++.+|++|.|+  |+++++
T Consensus        11 ~v~Dl~~s~~FY~~~lG~~~~-~~~-----~~~~~~~~~g~~l~l~~~~~~-~---~~~~~~~~~hiaf~v~~~dv~~~~   80 (139)
T PRK04101         11 SVSNLEKSIEFYEKVLGAKLL-VKG-----RKTAYFDLNGLWIALNEEKDI-P---RNEIHQSYTHIAFSIEEEDFDHWY   80 (139)
T ss_pred             EecCHHHHHHHHHhccCCEEE-eec-----CeeEEEecCCeEEEeeccCCC-C---CccCCCCeeEEEEEecHHHHHHHH
Confidence            346778888999999999995 221     134677777776666432211 1   1111234579999998  999999


Q ss_pred             HHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...    .++.+.+||+|||||+|||.+.
T Consensus        81 ~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         81 QRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             HHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            9999999998652    2467999999999999999864

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.72  E-value=1.9e-16  Score=102.15  Aligned_cols=109  Identities=20%  Similarity=0.226  Sum_probs=71.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      .-.|.+.+++||.++|||++.............+++..++.    .+++.......+    .....+..|++|.|+|+++
T Consensus        24 ~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~g~~hi~f~v~dld~   99 (150)
T TIGR00068        24 RVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEK----YDLGNGFGHIAIGVDDVYK   99 (150)
T ss_pred             EecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCc----ccCCCceeEEEEecCCHHH
Confidence            45788899999999999998532221111222344544431    233322111111    1112346799999999999


Q ss_pred             HHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...+     .+.+.+||+|||||+|||++.
T Consensus       100 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (150)
T TIGR00068       100 ACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQR  141 (150)
T ss_pred             HHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEC
Confidence            9999999999886532     234678999999999999985

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.71  E-value=2.8e-16  Score=99.26  Aligned_cols=104  Identities=15%  Similarity=0.154  Sum_probs=72.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCC-CCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHD-KLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~-~~~-~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~   81 (120)
                      .-.|.+.+++||.++|||++.. +... ... ....|+..++..+++.+...       +. ....+|+||.|+  |+++
T Consensus        11 ~V~dl~~s~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-------~~-~~~~~Hiaf~v~~~~ld~   81 (131)
T cd08364          11 IVKDLNKTTAFLQNIFNAREVY-SSGDKTFSLSKEKFFLIGGLWIAIMEGDS-------LQ-ERTYNHIAFKISDSDVDE   81 (131)
T ss_pred             EeCCHHHHHHHHHHHhCCeeEE-ecccccccccceeEEEcCCeEEEEecCCC-------CC-CCCceEEEEEcCHHHHHH
Confidence            4467888899999999998843 3221 011 11234555666777753221       11 124689999998  7999


Q ss_pred             HHHHHHHCCCeEEec---CC-CccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLS---KS-GRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~---~~-g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...   .. +.+++||+|||||.|||.+.
T Consensus        82 ~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          82 YTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             HHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            999999999998653   23 35899999999999999863

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.71  E-value=7.8e-16  Score=94.40  Aligned_cols=103  Identities=17%  Similarity=0.120  Sum_probs=73.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      .-+|.+.+++||.++|||++......   ...-+++..++ ..+.++......     +. .+...|++|.|+|++++++
T Consensus         7 ~v~d~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~f~v~di~~~~~   77 (114)
T cd07247           7 PTTDPERAKAFYGAVFGWTFEDMGDG---GGDYAVFSTGGGAVGGLMKAPEPA-----AG-SPPGWLVYFAVDDVDAAAA   77 (114)
T ss_pred             eCCCHHHHHHHHHhccCceeeeccCC---CCceEEEEeCCccEEEEecCCCCC-----CC-CCCeEEEEEEeCCHHHHHH
Confidence            34678889999999999999532211   11224455554 456665543221     11 1234699999999999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +|+++|+++...    +++.+.++|+|||||.|||+|
T Consensus        78 ~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          78 RVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            999999998763    345689999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.4e-16  Score=95.76  Aligned_cols=109  Identities=13%  Similarity=0.039  Sum_probs=72.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCC--CC-CCC---CCCCCCCCcceEEEEECCH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN--PD-PLS---GRPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~--~~-~~~---~~~~~~~~~~hi~f~v~d~   79 (120)
                      .-.|.+.+.+||.++|||++....+.   . .-..+..++..+.+.....  .. +..   ..+...+...|++|.|+|+
T Consensus         7 ~v~D~~~s~~FY~~~lG~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~di   82 (125)
T cd07264           7 YVEDVEKTLEFYERAFGFERRFLHES---G-DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFVTDDV   82 (125)
T ss_pred             EEcCHHHHHHHHHHhhCCeEEeecCC---C-cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEEcCCH
Confidence            45788999999999999998522221   1 1112333455555543211  00 000   1111112235999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++++++|+++...    ++|.+.++++|||||.|||.++
T Consensus        83 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          83 AAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             HHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999998653    4777889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.70  E-value=2.5e-16  Score=95.59  Aligned_cols=97  Identities=26%  Similarity=0.430  Sum_probs=68.1

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      +|.+.+++||.++|||++....+      ..+.+..+..    ...+.+.+..      +....+..|++|.|+|+++++
T Consensus         4 ~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~dv~~~~   71 (108)
T PF12681_consen    4 SDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDP------PGPPGGGFHLCFEVEDVDALY   71 (108)
T ss_dssp             SSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESS------SSSSSSEEEEEEEESHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCcc------ccCCCceeEEEEEEcCHHHHH
Confidence            57788999999999999964221      2244555421    2333333211      111234579999999999999


Q ss_pred             HHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEE
Q 033399           84 MILDKAGISYTL----SKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        84 ~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++|+++|+++..    .++|.+.++|.|||||+|||+
T Consensus        72 ~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   72 ERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            999999999765    257789999999999999985

...

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.69  E-value=1.2e-15  Score=94.77  Aligned_cols=97  Identities=19%  Similarity=0.198  Sum_probs=70.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~--i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      +-.|-+.+++||.++|||++. .++.    ...+|+..++..  +.|...+         .  .+..|++|.|++   ++
T Consensus         9 ~v~Dl~~s~~FY~~~LG~~~~-~~~~----~~~~~~~~~~~~~~~~l~~~~---------~--~~~~~~~f~v~~~~dl~   72 (120)
T cd07252           9 ESSDLDAWRRFATDVLGLQVG-DRPE----DGALYLRMDDRAWRIAVHPGE---------A--DDLAYAGWEVADEAALD   72 (120)
T ss_pred             EeCCHHHHHHHHHhccCceec-cCCC----CCeEEEEccCCceEEEEEeCC---------C--CceeEEEEEECCHHHHH
Confidence            456778889999999999984 3322    134677776543  4442211         1  135799999974   88


Q ss_pred             HHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...       ..+.+.+||+|||||.||++..
T Consensus        73 ~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          73 ALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence            9999999999999752       1334789999999999999863

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.69  E-value=6.2e-16  Score=94.63  Aligned_cols=101  Identities=19%  Similarity=0.206  Sum_probs=72.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~~   83 (120)
                      +-.|.+.+++||.++|||++. .+.+     ...|+..++..+.+...+.. +     ...+...|++|.|+  |+++++
T Consensus         5 ~v~d~~~s~~Fy~~~lg~~~~-~~~~-----~~~~~~~~~~~l~~~~~~~~-~-----~~~~~~~hiaf~v~~~d~~~~~   72 (113)
T cd08345           5 IVKDLNKSIAFYRDILGAELI-YSSS-----KEAYFELAGLWICLMEEDSL-Q-----GPERTYTHIAFQIQSEEFDEYT   72 (113)
T ss_pred             EECCHHHHHHHHHHhcCCeee-eccC-----ceeEEEecCeEEEeccCCCc-C-----CCCCCccEEEEEcCHHHHHHHH
Confidence            456788899999999999995 3322     23566666666555432211 1     11234589999994  799999


Q ss_pred             HHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...    ..+.+.+|++|||||+|||...
T Consensus        73 ~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          73 ERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            9999999998652    2356899999999999999863

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.69  E-value=6.6e-16  Score=109.21  Aligned_cols=111  Identities=24%  Similarity=0.283  Sum_probs=75.5

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      .+-.|.+.+++||+++|||++..........+..+|+..++.    .+++.......    ......+..|+||.|+|++
T Consensus        30 l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~----~~~~~~g~~hia~~v~dvd  105 (286)
T PLN02300         30 YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVD----KYDIGTGFGHFGIAVEDVA  105 (286)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCC----ccccCCCccEEEEEeCCHH
Confidence            345788999999999999999532111112334567766532    34443221111    1112235689999999999


Q ss_pred             HHHHHHHHCCCeEEec----CC-CccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|+++...    +. +.+.+||+|||||.|||++..
T Consensus       106 ~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300        106 KTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             HHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            9999999999998753    22 356789999999999999864

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.9e-15  Score=92.57  Aligned_cols=97  Identities=16%  Similarity=0.087  Sum_probs=69.9

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      -.|.+.+++||.++|||+.... .    + ..+++..++   ..+.+......         .....|++|.|+|+++++
T Consensus         8 v~Dl~~s~~FY~~~lG~~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d~~~~~   72 (112)
T cd07238           8 VADPEAAAAFYADVLGLDVVMD-H----G-WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDDVDAAL   72 (112)
T ss_pred             cCCHHHHHHHHHHhcCceEEEc-C----C-ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCCHHHHH
Confidence            3578889999999999998521 1    1 123344322   34555432110         112469999999999999


Q ss_pred             HHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...    .+|.+.+||.|||||.|||+++
T Consensus        73 ~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          73 ARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            9999999998763    4677899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.68  E-value=3.8e-16  Score=101.21  Aligned_cols=107  Identities=12%  Similarity=0.031  Sum_probs=70.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCC-CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      .-+|-+.+++||+++|||++...-... ......+|+.+++.  .+......   . ...+  .++.+|+||.|+|++++
T Consensus         8 ~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l-~~~~--~~g~~Hiaf~v~die~~   81 (153)
T cd07257           8 EVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLA---L-AQGP--ESGVHHAAFEVHDFDAQ   81 (153)
T ss_pred             ecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHH---H-hcCC--CCceeEEEEEcCCHHHH
Confidence            456788899999999999985211100 01234567776432  11110000   0 0011  23579999999999998


Q ss_pred             H---HHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           83 K---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~---~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .   ++|+++|+++...+     ....++|++|||||+|||+..
T Consensus        82 ~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          82 GLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             HHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            6   99999999987531     224567999999999999863

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.68  E-value=9.5e-16  Score=95.36  Aligned_cols=100  Identities=23%  Similarity=0.261  Sum_probs=71.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--CCHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v--~d~d~~~   83 (120)
                      .-+|-+.+++||.++|||++....+      ...|+..++..+.+...+..      +. .+...|+||.|  +|+++++
T Consensus         8 ~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~------~~-~~~~~hi~f~v~~~dl~~~~   74 (121)
T cd07244           8 AVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANV------GP-AKDYTHYAFSVSEEDFASLK   74 (121)
T ss_pred             EECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCC------CC-CCCeeeEEEEeCHHHHHHHH
Confidence            3467889999999999999853221      23566666655555322211      11 12457999999  5799999


Q ss_pred             HHHHHCCCeEEecC-CCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...+ ...+.+||.|||||.|||++.
T Consensus        75 ~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          75 EKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence            99999999986632 235789999999999999863

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.68  E-value=1.5e-15  Score=96.12  Aligned_cols=98  Identities=18%  Similarity=0.236  Sum_probs=69.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      .-.|-+.+++||.++|||++. .+..    ...+|+..++    ..+.|...+.         ...+.+|+||.|+|+++
T Consensus        10 ~v~dl~~s~~FY~~vlGl~~~-~~~~----~~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hiaf~v~d~~~   75 (134)
T cd08360          10 FVPDVEAAEAFYRDRLGFRVS-DRFK----GRGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAAFEVGDIDE   75 (134)
T ss_pred             EcCCHHHHHHHHHHhcCCEEE-EEec----CcEEEEECCCCCCCcEEEEecCCC---------CCCcceEEEEEeCCHHH
Confidence            346788899999999999985 3221    1356777642    2444433221         12357899999999887


Q ss_pred             HH---HHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEe
Q 033399           82 LK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 ~~---~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +.   ++|+++|+++...+     .+..++||+||+||.|||..
T Consensus        76 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          76 VMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             HHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            76   59999999986421     23467899999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.68  E-value=1.7e-15  Score=94.19  Aligned_cols=98  Identities=14%  Similarity=0.100  Sum_probs=68.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-C-e--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-A-E--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~-~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-+|.+.+++||.++|||++....++     ..+|+... + .  .+.+.  ..        . ..+..|+||.|+   |
T Consensus        11 ~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~--~~--------~-~~~~~hiaf~v~~~~d   74 (122)
T cd07265          11 RVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLR--EA--------D-TAGLDFMGFKVLDDAD   74 (122)
T ss_pred             EeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEec--cC--------C-CCCeeEEEEEeCCHHH
Confidence            45678899999999999998522111     23555542 1 1  23331  11        0 123589999997   7


Q ss_pred             HHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           79 VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++++|+++|+++...     +...+++||+|||||.|||.+..
T Consensus        75 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          75 LEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             HHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            999999999999998652     12357899999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.68  E-value=1.4e-15  Score=94.20  Aligned_cols=109  Identities=17%  Similarity=0.264  Sum_probs=73.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCC-CceeEEEEe----CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---   77 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~-~~~~~~l~~----g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---   77 (120)
                      .-.+.+.+++||.++|||++....+.... .....++..    ++..++|+..+.....  .+...++..|+||.|+   
T Consensus         8 ~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~f~v~~~~   85 (126)
T cd08346           8 ITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIAFSVPSEA   85 (126)
T ss_pred             EcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEEEEcCCHH
Confidence            35678899999999999998533222000 111223332    2346778765432210  1111234689999998   


Q ss_pred             CHHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEE
Q 033399           78 DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++++++++++|+++...  ..+.+.+||+||+||+|||+
T Consensus        86 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          86 SLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             HHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            4799999999999998652  35678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=3.4e-15  Score=92.47  Aligned_cols=103  Identities=18%  Similarity=0.243  Sum_probs=70.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~~   82 (120)
                      +-.|.+.+++||.++|||+.. .+.+   . ...| ..++..+.+.....+..    +.  ++..|++|.|+|   ++++
T Consensus         8 ~v~d~~~a~~FY~~~lG~~~~-~~~~---~-~~~~-~~~~~~~~~~~~~~~~~----~~--~~~~h~~f~v~~~~dl~~~   75 (120)
T cd07254           8 NVDDLEASIAFYSKLFGVEPT-KVRD---D-YAKF-LLEDPRLNFVLNERPGA----PG--GGLNHLGVQVDSAEEVAEA   75 (120)
T ss_pred             EeCCHHHHHHHHHHHhCCeEe-cccC---C-eeEE-EecCCceEEEEecCCCC----CC--CCeeEEEEEeCCHHHHHHH
Confidence            446788899999999999984 2221   1 1233 33333333322211110    11  346899999987   7889


Q ss_pred             HHHHHHCCCeEEecC------CCccEEEEeCCCCCeEEEEeeCC
Q 033399           83 KMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~~------~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++|.++|+++...+      ...+++|++||+||.|||.+.+|
T Consensus        76 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  119 (120)
T cd07254          76 KARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTLG  119 (120)
T ss_pred             HHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEeec
Confidence            999999999987632      12467999999999999999876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.67  E-value=1.3e-15  Score=94.76  Aligned_cols=111  Identities=19%  Similarity=0.206  Sum_probs=75.1

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCC-CCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEECCHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~i~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      -.|.+.+++||.++|||+.....+.. ......+++..++..++|++.........  ......+..|+||.|+|+++++
T Consensus         8 v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v~d~~~~~   87 (128)
T cd07249           8 VPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEVDDIDAAL   87 (128)
T ss_pred             eCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEeCCHHHHH
Confidence            46788999999999999995322221 12233566777777888887433221100  0012235689999999999999


Q ss_pred             HHHHHCCCeEEecC-----CCccEEEEeCCC--CCeEEEEe
Q 033399           84 MILDKAGISYTLSK-----SGRPAIFTRDPD--ANALEFTQ  117 (120)
Q Consensus        84 ~~l~~~Gv~~~~~~-----~g~~~~~~~DPd--Gn~iEl~~  117 (120)
                      ++|+++|+++...+     +|...+|+.|||  ||+|||++
T Consensus        88 ~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          88 ARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             HHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999987642     344545554555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.67  E-value=3e-15  Score=93.34  Aligned_cols=99  Identities=16%  Similarity=0.224  Sum_probs=71.4

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSK   81 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~   81 (120)
                      .+-.|.+.+++||.++|||++.. . .   + ..+++..++ ..+.+...+.          .....|++|.|+  |+++
T Consensus        10 l~v~Dl~~s~~FY~~~lG~~~~~-~-~---~-~~~~~~~~~~~~l~~~~~~~----------~~~~~h~a~~v~~~dl~~   73 (123)
T cd08351          10 VPARDREASAEFYAEILGLPWAK-P-F---G-PFAVVKLDNGVSLDFAQPDG----------EIPPQHYAFLVSEEEFDR   73 (123)
T ss_pred             EEcCCHHHHHHHHHHhcCCEeee-c-c---C-CEEEEEcCCCcEEEEecCCC----------CCCcceEEEEeCHHHHHH
Confidence            45678888999999999999952 1 1   1 123445443 3555543210          112479999997  6999


Q ss_pred             HHHHHHHCCCeEEec-----------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           82 LKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~-----------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++|+++|+++...           .+|.+.+||+|||||.|||++.+
T Consensus        74 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          74 IFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            999999999998541           25679999999999999999865

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=3.1e-15  Score=93.44  Aligned_cols=108  Identities=20%  Similarity=0.178  Sum_probs=75.9

Q ss_pred             eeccchhhhhhhhhhcc---CceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 033399            5 YKRKKREINKHQRFNLL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vL---G~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---   77 (120)
                      .+-.|.+.++.||.++|   ||++.. +..    ....|+.. ++..+.|.+.......... ....+..|+||.|+   
T Consensus         7 i~v~d~~~~~~Fy~~~l~~~G~~~~~-~~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~g~~hia~~v~~~~   80 (128)
T cd07242           7 LTVRDLERSRAFYDWLLGLLGFEEVK-EWE----DGRSWRAGDGGTYLVLQQADGESAGRHD-RRNPGLHHLAFRAPSRE   80 (128)
T ss_pred             EEeCCHHHHHHHHHHHHhhcCCEEEE-eec----cCceEEecCCceEEEEEecccCCCcccc-cCCcCeeEEEEEcCCHH
Confidence            34567888999999999   999963 221    12345554 5567888765433211011 11234689999997   


Q ss_pred             CHHHHHHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEee
Q 033399           78 DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      |+++++++|+++|+++...+       .+.+.+||+|||||+|||+.+
T Consensus        81 d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          81 AVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             HHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            48899999999999987631       346799999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.66  E-value=3e-15  Score=92.10  Aligned_cols=97  Identities=15%  Similarity=0.122  Sum_probs=70.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-.|.+.+++||.+ |||++. .+..     ..+|+..++....++.....       . .+...|++|.|+|.+++.+.
T Consensus        10 ~v~Dl~~s~~FY~~-lGl~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~af~v~~~~~~~~~   74 (113)
T cd07267          10 EHPDLDKAERFLTD-FGLEVA-ARTD-----DELYYRGYGTDPFVYVARKG-------E-KARFVGAAFEAASRADLEKA   74 (113)
T ss_pred             ccCCHHHHHHHHHH-cCCEEE-EecC-----CeEEEecCCCccEEEEcccC-------C-cCcccEEEEEECCHHHHHHH
Confidence            45678889999999 999984 3321     34677665433233222111       0 12467999999999999999


Q ss_pred             HHHCCCeEEec---CCCccEEEEeCCCCCeEEEEe
Q 033399           86 LDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        86 l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++.|+.+...   +++.+++||+|||||.|||+.
T Consensus        75 ~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          75 AALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             HHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999987653   456789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=6.3e-15  Score=91.11  Aligned_cols=107  Identities=25%  Similarity=0.429  Sum_probs=75.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCC-C-CCCCCCCcceEEEEE--CCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLS-G-RPEHGGRDRHTCIAI--RDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~-~-~~~~~~~~~hi~f~v--~d~d   80 (120)
                      +..+.+.++.||.++|||++. .+++    ...+++..++ ..+.++......+.. . .+....+..|++|.|  +|++
T Consensus         7 ~v~d~~~s~~Fy~~~lG~~~~-~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dl~   81 (122)
T cd08354           7 YVDDLEAAEAFYEDVLGLELM-LKED----RRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPAEELA   81 (122)
T ss_pred             EeCCHHHHHHHHHhccCCEEe-ecCC----CceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCHHHHH
Confidence            456788999999999999995 3332    1235677776 456555532211100 0 011123467999999  4799


Q ss_pred             HHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++++++.++|+++...   .++.+.+||+|||||+|||++
T Consensus        82 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          82 EWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             HHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEec
Confidence            9999999999988663   356788999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.66  E-value=6.2e-15  Score=92.25  Aligned_cols=96  Identities=17%  Similarity=0.262  Sum_probs=69.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      .-.|.+.+.+||.++|||++. .+..     ..+|+..++.  .+.+....            ....|+||+|+|   ++
T Consensus        13 ~v~d~~~s~~FY~~vLG~~~~-~~~~-----~~~~l~~~~~~~~i~l~~~~------------~~~~~iaf~v~~~~dv~   74 (124)
T cd08361          13 GTRDLAGATRFATDILGLQVA-ERTA-----KATYFRSDARDHTLVYIEGD------------PAEQASGFELRDDDALE   74 (124)
T ss_pred             eeCCHHHHHHHHHhccCceec-cCCC-----CeEEEEcCCccEEEEEEeCC------------CceEEEEEEECCHHHHH
Confidence            456788899999999999985 3221     2467777543  33332110            124799999985   99


Q ss_pred             HHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|+++...       ..+.+.+||+|||||.||++..+
T Consensus        75 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          75 SAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             HHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            9999999999998662       23356789999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=9.1e-15  Score=90.91  Aligned_cols=104  Identities=25%  Similarity=0.287  Sum_probs=72.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      .-.+.+.+++||.++|||++.. ...     ..+++..++  ..+.|...+....   ......+..|++|.|+   +++
T Consensus         9 ~v~d~~~~~~Fy~~~lG~~~~~-~~~-----~~~~l~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~f~v~~~~~v~   79 (125)
T cd07255           9 RVADLERSLAFYQDVLGLEVLE-RTD-----STAVLGTGGKRPLLVLEEDPDAPP---APPGATGLYHFAILLPSRADLA   79 (125)
T ss_pred             EECCHHHHHHHHHhccCcEEEE-cCC-----CEEEEecCCCeEEEEEEeCCCCCc---ccCCCCcEEEEEEECCCHHHHH
Confidence            3467788999999999999963 211     245666665  3455544332110   1111234689999997   489


Q ss_pred             HHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...  ....+++||+|||||+|||...
T Consensus        80 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          80 AALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             HHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEe
Confidence            9999999999988653  2224789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.65  E-value=7.4e-15  Score=92.54  Aligned_cols=102  Identities=17%  Similarity=0.245  Sum_probs=71.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS---   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d---   80 (120)
                      .-++.+.+++||.++|||++...... +.....+|+..++.  .+.+....         . ..+..|++|.|+|++   
T Consensus         6 ~V~dl~~a~~Fy~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~---------~-~~~~~hl~~~v~d~~~~~   74 (131)
T cd08343           6 RTPDVAATAAFYTEVLGFRVSDRVGD-PGVDAAAFLRCDEDHHDLALFPGP---------E-RPGLHHVAFEVESLDDIL   74 (131)
T ss_pred             EcCCHHHHHHHHHhcCCCEEEEEEcc-CCceeEEEEEcCCCcceEEEEcCC---------C-CCCeeEEEEEcCCHHHHH
Confidence            45678888999999999999532221 11134567777643  34443211         0 124689999999864   


Q ss_pred             HHHHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...    + .+.+++||+|||||+|||.+.
T Consensus        75 ~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~  117 (131)
T cd08343          75 RAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAE  117 (131)
T ss_pred             HHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcC
Confidence            7889999999998763    2 235788999999999999874

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=9.2e-15  Score=89.68  Aligned_cols=102  Identities=19%  Similarity=0.197  Sum_probs=71.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~   81 (120)
                      .-.|-+.+++||.++||+++....+      ..+++.. ++..+.+...+...+.   +...++..|++|.|+|   +++
T Consensus         5 ~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~   75 (114)
T cd07261           5 YVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEPA---SDATGGGSELAFMVDDGAAVDA   75 (114)
T ss_pred             EECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCCC---CCCCCCceEEEEEcCCHHHHHH
Confidence            3467788889999999999853211      1234555 3457777654322111   1112245799999985   889


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++++++++|+++...    .+| +.++|+|||||.|||+.
T Consensus        76 ~~~~~~~~g~~v~~~~~~~~~g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          76 LYAEWQAKGVKIIQEPTEMDFG-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHCCCeEecCccccCCc-cEEEEECCCCCEEEeeC
Confidence            999999999998763    344 67899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=3.7e-15  Score=92.91  Aligned_cols=107  Identities=15%  Similarity=0.011  Sum_probs=70.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-CeEEEEEecCCCC---CCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPD---PLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~i~l~~~~~~~---~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-+|-+.+++||.+ |||++....+.    ...+++..+ +..|.|+......   .........+...|++|.|+   +
T Consensus         7 ~V~Dl~~s~~FY~~-lGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~~~~   81 (124)
T cd09012           7 PVKDLEKSTAFYTA-LGFEFNPQFSD----EKAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADSREE   81 (124)
T ss_pred             ecCCHHHHHHHHHH-CCCEEccccCC----CCeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCCHHH
Confidence            34678889999976 99998421111    123555555 4567776532111   00000011223469999998   5


Q ss_pred             HHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEe
Q 033399           79 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++++++++|+++..++   .+.+.+||+|||||+|||+.
T Consensus        82 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          82 VDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            8899999999999987632   33468899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.64  E-value=5.9e-15  Score=95.73  Aligned_cols=103  Identities=15%  Similarity=0.198  Sum_probs=71.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCC---CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      .-+|.+.+++||.++|||++.......   ......+|+..++.  .+.+...+         . ..+.+|+||.|+|++
T Consensus        16 ~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~---------~-~~g~~Hiaf~V~d~~   85 (154)
T cd07237          16 ATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP---------G-PKRIHHLMLEVTSLD   85 (154)
T ss_pred             EeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC---------C-CceeEEEEEEcCCHH
Confidence            456888899999999999985211110   01234567776542  34443221         1 134789999998755


Q ss_pred             ---HHHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           81 ---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ---~~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                         +++++|+++|+++...+     .+.+++|++|||||+|||...
T Consensus        86 ~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          86 DVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             HHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence               68999999999987632     356899999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.64  E-value=6.7e-15  Score=96.62  Aligned_cols=104  Identities=20%  Similarity=0.255  Sum_probs=69.6

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~   81 (120)
                      -.|.+.+++||.++|||++.............+|+...+.  ++.+.....       .. .++.+|+||.|+|   +++
T Consensus        14 V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-------~~-~~~~~hiaf~v~~~~~l~~   85 (166)
T cd09014          14 ASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA-------GA-RGRLHHLAYALDTREDVLR   85 (166)
T ss_pred             cCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC-------CC-CCCceEEEEECCCHHHHHH
Confidence            4577889999999999998522111111223568777543  344422111       11 1346899999986   557


Q ss_pred             HHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...+     ....++||+|||||+|||++.
T Consensus        86 ~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          86 AADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             HHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            8899999999986421     223468999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.4e-14  Score=91.31  Aligned_cols=103  Identities=17%  Similarity=0.145  Sum_probs=68.1

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCC--------Ccee----EEEEeC----CeEEEEEecCCCCCCCCCCCCCCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKL--------PYRG----AWLWVG----AEMIHLMELPNPDPLSGRPEHGGR   68 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~--------~~~~----~~l~~g----~~~i~l~~~~~~~~~~~~~~~~~~   68 (120)
                      .|-+|.+.+.+||.++|||++. .+.+.+.        ..++    .++..+    +..++|.......+    .. .+.
T Consensus         8 irV~DlerSi~FY~~vLG~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~~-~g~   81 (127)
T cd08358           8 FKVGNRNKTIKFYREVLGMKVL-RHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----YE-LGN   81 (127)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEE-eeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----CC-CCC
Confidence            4678899999999999999984 3322111        1112    224332    23677765322111    11 122


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                       .|++|.|++. ++.++|+++|+++...+.+  .+|++||||+.|||+.
T Consensus        82 -~~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 -DFLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             -CEEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence             3778888777 5569999999999986654  8899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.64  E-value=9.4e-15  Score=87.68  Aligned_cols=104  Identities=25%  Similarity=0.269  Sum_probs=76.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      ..++.+.++.||.++||+++......  .....+++..++..++|...+.....    ...+...|++|.|+|+++++++
T Consensus         5 ~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~   78 (112)
T cd06587           5 TVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDAAYER   78 (112)
T ss_pred             eeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHHHHHH
Confidence            45678889999999999999533221  11234456656678888765432211    1223468999999999999999


Q ss_pred             HHHCCCeEEec----CCCccEEEEeCCCCCeEEE
Q 033399           86 LDKAGISYTLS----KSGRPAIFTRDPDANALEF  115 (120)
Q Consensus        86 l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl  115 (120)
                      |+++|+.+...    ..+.+.+++.||+||.|||
T Consensus        79 l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          79 LKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            99999988763    3567899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.64  E-value=1.1e-14  Score=93.38  Aligned_cols=101  Identities=12%  Similarity=0.171  Sum_probs=71.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH---H
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV---S   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~---d   80 (120)
                      .+-.|-+.+.+||.++|||+++ .+..    ...+|+...+ ...+++....        ...++++|+||.|+|+   +
T Consensus         5 l~V~Dle~s~~Fy~~vLG~~~~-~~~~----~~~~~l~~~~~~~~h~~~~~~--------~~~~gl~Hiaf~v~~~~~v~   71 (141)
T cd07258           5 IGSENFEASRDSLVEDFGFRVS-DLIE----DRIVFMRCHPNPFHHTFAVGP--------ASSSHFHHVNFMVTDIDDIG   71 (141)
T ss_pred             EecCCHHHHHHHHHhcCCCEee-eeeC----CEEEEEEcCCCCCcceeeecc--------CCCCceEEEEEECCCHHHHH
Confidence            3557888999999999999985 3322    2346776543 2223332211        1124679999999865   5


Q ss_pred             HHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...     ..+.+.+||+|||||.|||...
T Consensus        72 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  114 (141)
T cd07258          72 KALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFG  114 (141)
T ss_pred             HHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeC
Confidence            6799999999998652     2456789999999999999753

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.64  E-value=1.8e-14  Score=90.76  Aligned_cols=106  Identities=22%  Similarity=0.227  Sum_probs=73.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-C--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH-
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-A--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS-   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d-   80 (120)
                      .+..|.+.+++||.++|||++.. +.+   .....|+..+ +  ..+.++..+....    +...++..|++|.|+|++ 
T Consensus         7 l~v~D~~~s~~FY~~~lG~~~~~-~~~---~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~v~~~~~   78 (134)
T cd08348           7 LYVRDLEAMVRFYRDVLGFTVTD-RGP---LGGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFEVDSLDD   78 (134)
T ss_pred             EEecCHHHHHHHHHHhcCCEEEe-ecc---CCcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEEeCCHHH
Confidence            35678889999999999999853 222   1133566554 2  3566655432211    111234689999998765 


Q ss_pred             --HHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           81 --KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 --~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                        +++++|.++|+++...  ..+.+.+||+||+||.|||++.
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  120 (134)
T cd08348          79 LRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVD  120 (134)
T ss_pred             HHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEc
Confidence              5889999999998763  2345889999999999999863

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.63  E-value=1e-14  Score=93.76  Aligned_cols=97  Identities=13%  Similarity=0.155  Sum_probs=69.3

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH-
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK-   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~-   83 (120)
                      -.|.+.+++||.++|||++. .+.    ....+|+..++.  .+.+...+           .++..|++|.|+|++++. 
T Consensus        12 V~Dle~s~~FY~~~LG~~~~-~~~----~~~~~~l~~~~~~~~~~l~~~~-----------~~~~~hiaf~v~d~~~l~~   75 (144)
T cd07239          12 SPDVDKTVAFYEDVLGFRVS-DWL----GDQMAFLRCNSDHHSIAIARGP-----------HPSLNHVAFEMPSIDEVMR   75 (144)
T ss_pred             CCCHHHHHHHHHhcCCCEEE-Eee----CCeEEEEECCCCcceEEEccCC-----------CCceEEEEEECCCHHHHHH
Confidence            45778889999999999984 221    113467777643  34442110           124689999999888775 


Q ss_pred             --HHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           84 --MILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        84 --~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                        ++|+++|+++...     ..+.+.+||+||+||.|||++..
T Consensus        76 ~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          76 GIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             HHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence              8999999998653     12346789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.63  E-value=1e-14  Score=90.12  Aligned_cols=99  Identities=17%  Similarity=0.171  Sum_probs=70.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CCHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RDVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d~d~~   82 (120)
                      ...|.+.+++||.++|||++. .+..     ..+|+..++...+++.....       . .....|++|.|   ++++++
T Consensus        10 ~v~d~~~s~~FY~~~lG~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~v~~~~~l~~~   75 (120)
T cd08362          10 GVPDLAAAAAFYREVWGLSVV-AEDD-----GIVYLRATGSEHHILRLRRS-------D-RNRLDVVSFSVASRADVDAL   75 (120)
T ss_pred             ecCCHHHHHHHHHhCcCcEEE-EecC-----CEEEEECCCCccEEEEeccC-------C-CCCCceEEEEeCCHHHHHHH
Confidence            457889999999999999985 2221     24566654433333332211       0 11357999999   478999


Q ss_pred             HHHHHHCCCeEEec------CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...      +++.+.++|+||+||.|||+..
T Consensus        76 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          76 ARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             HHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            99999999998652      2456789999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.63  E-value=1.1e-14  Score=92.97  Aligned_cols=102  Identities=23%  Similarity=0.379  Sum_probs=66.2

Q ss_pred             hhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCC-CC-----CCCCCCCCCcceEEEEECCHHHHHHHHHH
Q 033399           15 HQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-PL-----SGRPEHGGRDRHTCIAIRDVSKLKMILDK   88 (120)
Q Consensus        15 ~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~-~~-----~~~~~~~~~~~hi~f~v~d~d~~~~~l~~   88 (120)
                      .||..+||++.....|. ......+|....+..++|.-..... +.     +++... .+.+||||+|+|+++++++|++
T Consensus        58 ~Fsl~fL~~~~~~~vP~-~~~~~~v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~p-rGfgHIci~V~di~sac~~lke  135 (170)
T KOG2944|consen   58 KFSLYFLGAEVSEDVPK-PEHGVSVFVFSRNAKLELTHNWGTESPPDQAYLNGNKEP-RGFGHICIEVDDINSACERLKE  135 (170)
T ss_pred             hhHHHhhcccccccCcc-CCCCCceEEecccCceeeecCCCCCCCcchhhcCCCCCC-CccceEEEEeCCHHHHHHHHHH
Confidence            34445555554322222 1222336777777778885432221 11     122221 2579999999999999999999


Q ss_pred             CCCeEEec-CCC--ccEEEEeCCCCCeEEEEee
Q 033399           89 AGISYTLS-KSG--RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        89 ~Gv~~~~~-~~g--~~~~~~~DPdGn~iEl~~~  118 (120)
                      +||++... ..|  ...+|+.||||+.|||...
T Consensus       136 kGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  136 KGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             hCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            99998774 334  3679999999999999764

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=8.1e-15  Score=90.95  Aligned_cols=106  Identities=19%  Similarity=0.198  Sum_probs=67.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCC--CCCCCC-CCCCCCcceEEE--EECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP--DPLSGR-PEHGGRDRHTCI--AIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~--~~~~~~-~~~~~~~~hi~f--~v~d~d   80 (120)
                      .-.|-+.+++||.++|||++.. ...     .-+.+..++..+.+......  ...... ........|++|  .++|++
T Consensus         6 ~v~Dl~~s~~FY~~~lG~~~~~-~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dv~   79 (125)
T cd08357           6 PVRDLEAARAFYGDVLGCKEGR-SSE-----TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEEFD   79 (125)
T ss_pred             EeCCHHHHHHHHHHhcCCEEee-ccC-----CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHHHH
Confidence            3467788889999999999942 211     11223344444444322111  100000 111123468764  568999


Q ss_pred             HHHHHHHHCCCeEEec--------CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~--------~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++|+++|+++...        +++.+.+||+|||||.|||..
T Consensus        80 ~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          80 ALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            9999999999998752        133588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.62  E-value=1.3e-14  Score=94.77  Aligned_cols=101  Identities=21%  Similarity=0.240  Sum_probs=66.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      .-.|.+.+++||.++|||++..............|+..++.  .+.+...           ...+.+|+||.|+|   ++
T Consensus        10 ~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~-----------~~~~~~Hiaf~v~~~~~v~   78 (161)
T cd07256          10 RVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG-----------NGPRLHHVAFWVPEPHNII   78 (161)
T ss_pred             ecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC-----------CCCceeEEEEEcCCHHHHH
Confidence            45678899999999999998521111011222456655432  2333211           01246899999986   77


Q ss_pred             HHHHHHHHCCCeEE--ecC-----CCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYT--LSK-----SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~--~~~-----~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++|+++|+...  ..+     ++.+++||+|||||+|||++
T Consensus        79 ~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~  122 (161)
T cd07256          79 RTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYT  122 (161)
T ss_pred             HHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEee
Confidence            88899999999642  211     23567999999999999985

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.62  E-value=2.2e-14  Score=88.00  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=72.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      ..-.+.+.+++||.++|||++.. +.+     ..+|+..+ +..+.+.-...+       .  .+..|++|.|+   +++
T Consensus         8 l~v~d~~~~~~FY~~~lg~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~-------~--~~~~h~~~~v~~~~~v~   72 (117)
T cd07240           8 LEVPDLERALEFYTDVLGLTVLD-RDA-----GSVYLRCSEDDHHSLVLTEGD-------E--PGVDALGFEVASEEDLE   72 (117)
T ss_pred             EecCCHHHHHHHHHhccCcEEEe-ecC-----CeEEEecCCCCcEEEEEEeCC-------C--CCceeEEEEcCCHHHHH
Confidence            34578899999999999999963 221     24677776 333333221111       1  23589999997   688


Q ss_pred             HHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...    +++.+.+||.||+||.||++..
T Consensus        73 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          73 ALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             HHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            9999999999998763    3456899999999999999853

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.62  E-value=1.9e-14  Score=89.27  Aligned_cols=104  Identities=14%  Similarity=0.102  Sum_probs=67.8

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCC-CCCCCCCCCCcceEEEEEC---CHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR---DVSKL   82 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~i~l~~~~~~~~-~~~~~~~~~~~~hi~f~v~---d~d~~   82 (120)
                      .|-+.+++||. .|||++. ....   ....+++..+ +..+.|........ ....+...+...|++|.|+   |++++
T Consensus         9 ~D~~~a~~FY~-~LGf~~~-~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dvd~~   83 (122)
T cd07235           9 ADMAKSLDFYR-RLGFDFP-EEAD---DEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCETPAEVDAL   83 (122)
T ss_pred             ccHHHHHHHHH-HhCceec-CCcC---CCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCCHHHHHHH
Confidence            57788899996 5999984 2211   1123445555 45555533221110 0011111223468999875   89999


Q ss_pred             HHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEE
Q 033399           83 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~  116 (120)
                      +++|+++|+++...    ++|.+.++|+|||||+|||+
T Consensus        84 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          84 YAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            99999999987653    46778899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.62  E-value=2e-14  Score=89.22  Aligned_cols=97  Identities=20%  Similarity=0.184  Sum_probs=68.4

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-e---EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-E---MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~---~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---   77 (120)
                      ..-.|.+.+++||.++|||++. .+..     ..+|+...+ .   .+.+...         +  ..+.+|+||.|+   
T Consensus        12 l~v~dl~~a~~FY~~~lG~~~~-~~~~-----~~~~l~~~~~~~~~~~~l~~~---------~--~~~~~h~af~v~~~~   74 (121)
T cd09013          12 LLTPKPEESLWFFTDVLGLEET-GREG-----QSVYLRAWGDYEHHSLKLTES---------P--EAGLGHIAWRASSPE   74 (121)
T ss_pred             EEeCCHHHHHHHHHhCcCCEEE-eecC-----CeEEEEeccCCCccEEEEeeC---------C--CCceEEEEEEcCCHH
Confidence            4456788889999999999995 3321     235665533 1   2333211         1  124689999997   


Q ss_pred             CHHHHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEee
Q 033399           78 DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++++|+++|+++...   +....++||+|||||.|||+..
T Consensus        75 ~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          75 ALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             HHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            5889999999999997532   3445789999999999999863

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=2.3e-14  Score=88.39  Aligned_cols=106  Identities=16%  Similarity=0.109  Sum_probs=72.3

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCC--CCCCCCCCCCcceEEEEE---CCHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--LSGRPEHGGRDRHTCIAI---RDVSK   81 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~--~~~~~~~~~~~~hi~f~v---~d~d~   81 (120)
                      -.|.+.++.||.++|||++. .++.    ....++..++..+++.+.+....  ............|++|.+   +|+++
T Consensus         6 v~d~~~a~~FY~~~lg~~~~-~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   80 (121)
T cd07251           6 VADLARSRAFYEALLGWKPS-ADSN----DGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEVDA   80 (121)
T ss_pred             eCCHHHHHHHHHHhcCceec-ccCC----CceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHHHH
Confidence            46778899999999999994 3321    12356777777788775432110  000001111224676665   57999


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++++.|+++...    ++|.+.+|++||+||+|||..
T Consensus        81 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          81 VLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            999999999998753    356789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.60  E-value=1.1e-15  Score=94.67  Aligned_cols=111  Identities=23%  Similarity=0.285  Sum_probs=71.5

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC-C-CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCC-CCCCcceEEEEEC---C
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP-H-DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIAIR---D   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~-~-~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~-~~~~~~hi~f~v~---d   78 (120)
                      .+-+|.+.+.+||+++|||+++.... . ........++..++..++|.....+.+...... ......|+++.+.   |
T Consensus         7 i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d   86 (128)
T PF00903_consen    7 IRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFLAFDVDD   86 (128)
T ss_dssp             EEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEEESSHHH
T ss_pred             EEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEEeccHHH
Confidence            35678899999999999999974333 1 011122345566666777766433221110000 0002467777775   6


Q ss_pred             HHHHHHHHHHCCCeEEec----CC-CccEEEEeCCCCCeEEE
Q 033399           79 VSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEF  115 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn~iEl  115 (120)
                      +++++++|++.|+++...    .. ....+|++||+||.|||
T Consensus        87 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   87 LDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             HHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             HHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            778999999999998773    23 34556799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.2e-13  Score=85.77  Aligned_cols=100  Identities=20%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             ccchhhhhhhhhhc---cCceEeccCCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 033399            7 RKKREINKHQRFNL---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   78 (120)
Q Consensus         7 ~~~~~~~~~fy~~v---LG~~~~~~~~~~~~~~~~~~l~~g--~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---   78 (120)
                      -.+.+.++.||.++   |||++. .++.   + ..+++..+  +..+.|.......+    +. .+...|+||.|+|   
T Consensus         8 v~d~~~s~~FY~~~f~~lg~~~~-~~~~---~-~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~~~~hi~f~v~~~~~   77 (123)
T cd07262           8 VNDLERARAFYDAVLAPLGIKRV-MEDG---P-GAVGYGKGGGGPDFWVTKPFDGEP----AT-AGNGTHVAFAAPSREA   77 (123)
T ss_pred             cCcHHHHHHHHHHHHhhcCceEE-eecC---C-ceeEeccCCCCceEEEeccccCCC----CC-CCCceEEEEECCCHHH
Confidence            46788899999988   799984 2221   1 12233333  34666654321111    11 1234699999986   


Q ss_pred             HHHHHHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEE
Q 033399           79 VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~  116 (120)
                      +++++++++++|+.+...+       .+.+++||+|||||.|||+
T Consensus        78 v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          78 VDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             HHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            7889999999999986532       2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.55  E-value=1.7e-13  Score=86.43  Aligned_cols=98  Identities=18%  Similarity=0.109  Sum_probs=64.9

Q ss_pred             eccchhhhhhhhhhcc---CceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CCH
Q 033399            6 KRKKREINKHQRFNLL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RDV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d~   79 (120)
                      .-.|-+.+++||.++|   |++... .        .. +..++..+.|......   .  +. ..+..|+||.|   +++
T Consensus        14 ~V~Dle~s~~FY~~vlg~lg~~~~~-~--------~~-~~~g~~~l~l~~~~~~---~--~~-~~g~~h~af~v~~~~dv   77 (128)
T PRK06724         14 WVANLEESISFYDMLFSIIGWRKLN-E--------VA-YSTGESEIYFKEVDEE---I--VR-TLGPRHICYQAINRKVV   77 (128)
T ss_pred             EeCCHHHHHHHHHHHHhhCCcEEee-e--------Ee-eeCCCeeEEEecCCcc---c--cC-CCCceeEEEecCChHHH
Confidence            4567888999999865   666520 0        01 1123334444322211   0  11 12358999998   689


Q ss_pred             HHHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           80 SKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++++|+++|+++...       .+|.+++||+|||||.|||...+
T Consensus        78 d~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         78 DEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             HHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            99999999999998642       14558899999999999998654

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.55  E-value=1e-13  Score=97.84  Aligned_cols=96  Identities=18%  Similarity=0.201  Sum_probs=69.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      .-+|.+.+++||.++|||++. .+..    ....|+.+++.  .+.+...+         .  .+..|++|.|+|   ++
T Consensus        10 ~V~Dl~~s~~FY~~~LGl~~~-~~~~----~~~~~~~~~~~~~~~~l~~~~---------~--~~~~~~~f~V~~~~~l~   73 (286)
T TIGR03213        10 GVSDVDAWREFATEVLGMMVA-SEGE----NDALYLRLDSRAHRIAVHPGE---------S--DDLAYAGWEVADEAGLD   73 (286)
T ss_pred             EeCCHHHHHHHHHhccCcccc-cCCC----CceEEEEcCCCceEEEEEECC---------c--CCeeeEeeeeCCHHHHH
Confidence            456788899999999999984 2221    12246677643  34443221         1  135799999998   88


Q ss_pred             HHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.++|+++|+++...       ..+.+.++|.|||||.|||+.
T Consensus        74 ~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        74 QVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             HHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            9999999999998762       234688999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.54  E-value=1.3e-13  Score=98.02  Aligned_cols=101  Identities=22%  Similarity=0.256  Sum_probs=66.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCc-eeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---H
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPY-RGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---V   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~   79 (120)
                      .-+|.+.+++||.++|||++........... ...|+..++.  .+.+...         +. .+..+|+||.|+|   +
T Consensus       152 ~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~g~~~Hiaf~v~~~~~v  221 (303)
T TIGR03211       152 YGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGD---------PE-PGKLHHVSFFLDSWEDV  221 (303)
T ss_pred             EeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecC---------CC-CCceEEEEEEcCCHHHH
Confidence            3467889999999999999852211100111 3456655432  2222111         11 2346899999996   5


Q ss_pred             HHHHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEE
Q 033399           80 SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++++|+++|+++...+     .+.+++||+|||||+|||.
T Consensus       222 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       222 LKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             HHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            557889999999987532     1357899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.52  E-value=3.3e-13  Score=83.51  Aligned_cols=96  Identities=17%  Similarity=0.178  Sum_probs=67.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-C-e--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-A-E--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~-~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-.|-+.+++||.++|||++. .+.+     ..+|+... + .  .+.+...          . ..+..|++|.|.   |
T Consensus        11 ~v~d~~~~~~Fy~~~lG~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~hi~~~v~~~~d   73 (121)
T cd07266          11 RVTDLEKSREFYVDVLGLVET-EEDD-----DRIYLRGLEEFIHHSLVLTKA----------P-VAGLGHIAFRVRSEED   73 (121)
T ss_pred             EcCCHHHHHHHHHhccCCEEe-ccCC-----CeEEEEecCCCceEEEEEeeC----------C-CCceeEEEEECCCHHH
Confidence            346788899999999999995 3221     23455432 2 1  2222211          0 123579999994   7


Q ss_pred             HHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...     ++..+++|+.|||||.|||+..
T Consensus        74 v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          74 LDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             HHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            899999999999998642     2335789999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.51  E-value=2.7e-13  Score=93.53  Aligned_cols=105  Identities=18%  Similarity=0.269  Sum_probs=77.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      -+.+|.+..++||+++|||++. ++.     ...+.+.+++. -+.|.+.+.....  .+. ..+..|+||.+++   +.
T Consensus        16 L~vrdL~~~~~FY~~ilGL~v~-~~~-----~~~v~L~vgg~~LL~L~q~~~a~~~--~~~-~aGLyH~AfLlP~r~~L~   86 (265)
T COG2514          16 LNVRDLDSMTSFYQEILGLQVL-EET-----DGSVTLGVGGTPLLTLEQFPDARRP--PPR-AAGLYHTAFLLPTREDLA   86 (265)
T ss_pred             EEeccHHHHHHHHHHhhCCeee-ecc-----CceEEEeeCCEEEEEEEeCCCCCCC--Ccc-ccceeeeeeecCCHHHHH
Confidence            3678999999999999999995 332     23466788877 4555444433211  122 2356899999985   77


Q ss_pred             HHHHHHHHCCCeEEe--cCCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~--~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .++.++...|+.+..  ...-..++||.||+||-||++..
T Consensus        87 ~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          87 RVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             HHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEec
Confidence            888999999999974  34557899999999999999864

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.50  E-value=8.9e-13  Score=93.10  Aligned_cols=102  Identities=13%  Similarity=0.197  Sum_probs=68.7

Q ss_pred             eccchhhhhhhhhhccCceEeccC--CCC-CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEAR--PHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~--~~~-~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      +-.|.+.+++||.++|||+++...  +.. ......+|+.+++.  .+.+...+         . .++.+|+||+|+|++
T Consensus       149 ~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~---------~-~~~~~Hiaf~v~d~~  218 (286)
T TIGR03213       149 RVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP---------S-EKRLNHLMLEVDTLD  218 (286)
T ss_pred             EcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC---------C-CCceEEEEEEcCCHH
Confidence            456778889999999999985211  110 01123567776543  23332111         1 234789999999877


Q ss_pred             H---HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           81 K---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~---~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +   ++++|+++|+.....    .++.+++||+||+||+||+..
T Consensus       219 ~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       219 DVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             HHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            6   799999999933321    245678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.50  E-value=6.2e-13  Score=81.56  Aligned_cols=93  Identities=22%  Similarity=0.289  Sum_probs=62.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCe--EEEEEecCCCCCCCCCCCCCCCcce--EEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRH--TCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~--~i~l~~~~~~~~~~~~~~~~~~~~h--i~f~v~d~d   80 (120)
                      .-.|-+.+++||. +|||++. .+.+      ..++.. ++.  .+.+.+.+         .  ....|  ++|.++|++
T Consensus         9 ~v~d~~~s~~FY~-~lG~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~d~~   69 (112)
T cd08344           9 EVPDLEVARRFYE-AFGLDVR-EEGD------GLELRTAGNDHRWARLLEGA---------R--KRLAYLSFGIFEDDFA   69 (112)
T ss_pred             ecCCHHHHHHHHH-HhCCcEE-eecC------ceEEEecCCCceEEEeecCC---------C--CceeeEEEEeEhhhHH
Confidence            4467889999996 7999995 3221      234433 322  23332111         1  11345  445568999


Q ss_pred             HHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++|+++|+++...  .++.+.+||.|||||.|||..
T Consensus        70 ~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          70 AFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             HHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEec
Confidence            9999999999998764  345678999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PLN02300 lactoylglutathione lyase

Probab=99.48  E-value=7.4e-13  Score=93.67  Aligned_cols=110  Identities=15%  Similarity=0.092  Sum_probs=74.2

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      ..|.+.+.+||.++||+++..........+..+++..++    ..+++.......    .+....+..|++|.|+|++++
T Consensus       162 ~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~----~~~~g~~~~~i~~~v~di~~~  237 (286)
T PLN02300        162 VGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVT----EYTKGNAYAQIAIGTDDVYKT  237 (286)
T ss_pred             eCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCC----ccccCCceeEEEEecCCHHHH
Confidence            467888999999999999952111111234445555432    234443311111    111123467999999999999


Q ss_pred             HHHHHHCCCeEEec----CC-CccEEEEeCCCCCeEEEEeeCC
Q 033399           83 KMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++++++|+++...    ++ +.+.++|+|||||.|+|++..|
T Consensus       238 ~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        238 AEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             HHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccch
Confidence            99999999998763    22 2478899999999999998654

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.46  E-value=1.9e-12  Score=91.56  Aligned_cols=96  Identities=18%  Similarity=0.163  Sum_probs=68.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-e---EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-E---MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~---~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-.|.+.++.||.++|||++.. +..     ..+|+...+ .   .+.+...         +.  .+..|++|.|+   |
T Consensus        11 ~v~Dl~~s~~FY~~vLGl~~~~-~~~-----~~~~~~~~~~~~~~~l~l~~~---------~~--~~~~hiaf~v~~~~d   73 (294)
T TIGR02295        11 RVTDLDKSREFYVDLLGFRETE-SDK-----EYIYLRGIEEFQHHSLVLTKA---------PS--AALSYIGFRVSKEED   73 (294)
T ss_pred             EeCCHHHHHHHHHHccCCEEEE-ecC-----CeEEEeccCcCCceEEEeeeC---------CC--cCccEEEEEeCCHHH
Confidence            4568889999999999999852 211     235554321 1   2222211         11  23589999997   7


Q ss_pred             HHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...  +.+.+++||+|||||.|||++.
T Consensus        74 l~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        74 LDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             HHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            899999999999998763  3446899999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.44  E-value=1.7e-12  Score=91.82  Aligned_cols=102  Identities=25%  Similarity=0.260  Sum_probs=65.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      .-.|-+.+++||.++|||++..............|+..++.  .+.+.  .         ....+.+|+||.|+|   ++
T Consensus       143 ~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~Hiaf~v~d~~~v~  211 (294)
T TIGR02295       143 FVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALT--N---------GNGPRLHHIAYWVHDPLNII  211 (294)
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEee--c---------CCCCceeeEEEEcCCHHHHH
Confidence            34677888999999999998522111111122345544322  22221  1         011347899999998   55


Q ss_pred             HHHHHHHHCCCe--EEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~--~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|++  +...+     .+..++|++||+||+|||+..
T Consensus       212 ~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       212 KACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             HHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            568999999997  43321     124579999999999999763

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.43  E-value=2e-12  Score=91.88  Aligned_cols=97  Identities=16%  Similarity=0.166  Sum_probs=68.5

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---   77 (120)
                      ..-.|.+.+++||.++|||++. .+..     ..+++.. ++   ..+.+...         +  ..+..|+||.|+   
T Consensus        10 l~V~Dle~s~~FY~~~LG~~~~-~~~~-----~~~~~~~~~~~~~~~~~l~~~---------~--~~g~~hiaf~v~~~~   72 (303)
T TIGR03211        10 LRVLDLEESLKHYTDVLGLEET-GRDG-----QRVYLKAWDEWDHYSVILTEA---------D--TAGLDHMAFKVESEA   72 (303)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEe-eecC-----ceEEEEeccccccceEeeccC---------C--CCceeEEEEEeCCHH
Confidence            3457888999999999999995 3322     1344443 21   23333211         0  123689999998   


Q ss_pred             CHHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           78 DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      |+++++++|+++|+++...     ....+.+||+|||||.|||.+.
T Consensus        73 dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        73 DLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             HHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            7899999999999998652     2235789999999999999874

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.36  E-value=2.5e-12  Score=78.80  Aligned_cols=89  Identities=19%  Similarity=0.209  Sum_probs=65.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      +.-+|.+.+.+||.++||++..........+...+++..++  ..|+|++........  ....++++||||.|+|++++
T Consensus         5 i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~--~~~~~gi~Hia~~v~D~d~~   82 (109)
T PF13669_consen    5 IVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPL--DRGGGGIHHIAFEVDDLDAA   82 (109)
T ss_dssp             EEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHH--HHTSSEEEEEEEEESHHHHH
T ss_pred             EEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCccc--ccCCCCEEEEEEEeCCHHHH
Confidence            34568899999999999998853222223456778888887  489999865432100  01345689999999999999


Q ss_pred             HHHHHHCCCeEEe
Q 033399           83 KMILDKAGISYTL   95 (120)
Q Consensus        83 ~~~l~~~Gv~~~~   95 (120)
                      .++|+++|+++..
T Consensus        83 ~~~l~~~G~~~~~   95 (109)
T PF13669_consen   83 IARLEAQGFRVLD   95 (109)
T ss_dssp             HHHHHHTTECEEE
T ss_pred             HHHHHHCCCEEcc
Confidence            9999999999876

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.27  E-value=7.2e-11  Score=71.97  Aligned_cols=106  Identities=25%  Similarity=0.371  Sum_probs=68.8

Q ss_pred             eeeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC--CeEEEEEecCCCCC-CCCC-CCCCCCcceEE--EEEC
Q 033399            4 KYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDP-LSGR-PEHGGRDRHTC--IAIR   77 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~i~l~~~~~~~~-~~~~-~~~~~~~~hi~--f~v~   77 (120)
                      ++--.|.+.++.||.++||++.-  |.      ...|+.+.  +.++..-..+.++. ..+. ....-...|++  |.++
T Consensus         9 A~pV~Dl~~tr~FYgevlG~~~G--Rs------td~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~e   80 (138)
T COG3565           9 AIPVNDLDETRRFYGEVLGCKEG--RS------TDTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPVE   80 (138)
T ss_pred             eeeccccHHHHhhhhhhcccccc--cc------cceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEHH
Confidence            45567889999999999999993  21      22565553  44332222222211 1111 11111235766  5667


Q ss_pred             CHHHHHHHHHHCCCeEEec--------CCCccEEEEeCCCCCeEEEEe
Q 033399           78 DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~--------~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      |.-++.++|+++|+.+..+        +...+.+|+.||.||.+|+..
T Consensus        81 dW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          81 DWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             HHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            8999999999999988652        344789999999999999864

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.25  E-value=3.8e-10  Score=70.89  Aligned_cols=106  Identities=12%  Similarity=0.027  Sum_probs=72.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   74 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f   74 (120)
                      +=.++.+...+||.++||+++....+...          .....+-+.+++..|.+.......+.    . .+...++++
T Consensus         6 ~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~----~-~~~~~~l~i   80 (128)
T cd06588           6 WFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF----T-FGNGISLSV   80 (128)
T ss_pred             eeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC----C-CCCCEEEEE
Confidence            34578899999999999999974322100          11123457778888877653321110    1 122358999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEE
Q 033399           75 AIRD---VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        75 ~v~d---~d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      .|+|   +++++++|++.| ++..    .++|.+...|+||+|+.|+|.
T Consensus        81 ~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          81 ECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             ECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            9986   778889998877 5544    358888999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.96  E-value=6.7e-08  Score=61.44  Aligned_cols=109  Identities=17%  Similarity=0.054  Sum_probs=75.7

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   76 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v   76 (120)
                      +++.....+||.++||+++....+.++          ...-.+-|.+++..|.+.......+   ....++...-|-+.+
T Consensus         9 ~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~l~~~~   85 (136)
T COG2764           9 NGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLSLDLYV   85 (136)
T ss_pred             CCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEEEEEEe
Confidence            457788899999999999964333322          1223345777887777754221111   111112234677788


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           77 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        77 ~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|++++++++.+.|++++.+    .||.+.-.++||.|+.+-|...
T Consensus        86 ~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~  131 (136)
T COG2764          86 EDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTP  131 (136)
T ss_pred             hHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecC
Confidence            89999999999999888773    6899999999999999998764

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.95  E-value=5e-08  Score=61.21  Aligned_cols=105  Identities=14%  Similarity=0.004  Sum_probs=68.4

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      ..|-+..++||..|+|.+.. ...+. .......+..++ ...-.+.....    ..+.  +..-++-|.|+|++++++|
T Consensus        17 ~~D~~ra~~FY~~vFgW~~~-~~~~~-~~~~y~~f~~~~~~~gG~l~~~~~----~~p~--~~~~~iy~~v~did~~l~r   88 (127)
T COG3324          17 VSDLERAKAFYEKVFGWTFE-DYFDM-GEMRYAVFPADGAGAGGGLMARPG----SPPG--GGGWVIYFAVDDIDATLER   88 (127)
T ss_pred             cCCHHHHHHHHHHhhCceec-ccccC-CCceEEEEECCCccccceeccCCc----CCCC--CCCEEEEEecCChHHHHHH
Confidence            57889999999999999995 22110 112222232222 11111111100    0111  2235788999999999999


Q ss_pred             HHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      .+++|-+++.+    +.+.+.+.+.||+||+|-|.+..
T Consensus        89 v~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          89 VVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             HHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            99999999874    33667888999999999998865

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.89  E-value=8.3e-09  Score=69.25  Aligned_cols=88  Identities=15%  Similarity=0.026  Sum_probs=56.3

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCC--CCceeEEEEeCC--eEEEEEecCCC-CCCC-C---CCCCCCCcceEEEEECC
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDK--LPYRGAWLWVGA--EMIHLMELPNP-DPLS-G---RPEHGGRDRHTCIAIRD   78 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~--~~~~~~~l~~g~--~~i~l~~~~~~-~~~~-~---~~~~~~~~~hi~f~v~d   78 (120)
                      .+.+.+.+||.++|||+.........  .+.....+..++  ..+.|.+...+ .... .   ....+.+.+||||.|+|
T Consensus        14 ~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~Gv~HIAf~vdD   93 (191)
T cd07250          14 GEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGAGVQHIALATDD   93 (191)
T ss_pred             hHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCCceeEEEEECCC
Confidence            47788899999999999853221111  122333455433  46777654321 1100 0   00113467899999999


Q ss_pred             HHHHHHHHHHCCCeEEe
Q 033399           79 VSKLKMILDKAGISYTL   95 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~   95 (120)
                      +++++++|+++|+++..
T Consensus        94 I~~~~~~L~~~Gv~~l~  110 (191)
T cd07250          94 IFATVAALRARGVEFLP  110 (191)
T ss_pred             HHHHHHHHHHcCCeecc
Confidence            99999999999999965

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.83  E-value=1.5e-08  Score=69.24  Aligned_cols=107  Identities=21%  Similarity=0.204  Sum_probs=72.2

Q ss_pred             ceeeccchhhhhhhhhhccCceEeccCC--C-------CC--CCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCC
Q 033399            3 YKYKRKKREINKHQRFNLLGLEINEARP--H-------DK--LPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGG   67 (120)
Q Consensus         3 ~~~~~~~~~~~~~fy~~vLG~~~~~~~~--~-------~~--~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~   67 (120)
                      |-||-++++.+..||+++|||++..++.  +       ++  ..+..+++..|+.    .++|.-.-.-    ....-+.
T Consensus        21 ~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV----~~YelGn   96 (299)
T KOG2943|consen   21 YVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGV----SKYELGN   96 (299)
T ss_pred             EeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCc----cceeccC
Confidence            6789999999999999999999964321  1       11  1223344666653    3555321111    1122234


Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .+.||.+.++|+-...+.++..|-    ...|...+++.||||+.++|.+
T Consensus        97 dfg~i~I~s~dv~~~ve~v~~p~~----~~~g~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   97 DFGGITIASDDVFSKVEKVNAPGG----KGSGCGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             CcccEEEeHHHHHHHHHHhcCcCC----cccceEEEEEECCCCcEEEEec
Confidence            578999999998888887766554    3345667889999999999986

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.77  E-value=1.1e-07  Score=69.23  Aligned_cols=87  Identities=13%  Similarity=0.071  Sum_probs=55.2

Q ss_pred             cchhhhhhhhhhccCceEeccCCC--CC-CCceeEEEEe--CCeEEEEEecCCCC-CCC-C---CCCCCCCcceEEEEEC
Q 033399            8 KKREINKHQRFNLLGLEINEARPH--DK-LPYRGAWLWV--GAEMIHLMELPNPD-PLS-G---RPEHGGRDRHTCIAIR   77 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~--~~-~~~~~~~l~~--g~~~i~l~~~~~~~-~~~-~---~~~~~~~~~hi~f~v~   77 (120)
                      .+.+.+..||.++|||++.. +.+  .. ......++..  ++..|+|.+..... ... .   ....+.+++||||.|+
T Consensus       169 ~dl~~~~~fY~~~lGf~~~~-~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~~~g~Gv~HiAf~vd  247 (353)
T TIGR01263       169 GQMEPWAEFYEKIFGFREIR-SFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGAGVQHIALNTD  247 (353)
T ss_pred             ccHHHHHHHHHHHhCCceee-EEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHHcCCCCccEEEEEcC
Confidence            47889999999999999852 211  00 1111223333  33577776532111 110 0   0111346789999999


Q ss_pred             CHHHHHHHHHHCCCeEEe
Q 033399           78 DVSKLKMILDKAGISYTL   95 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~   95 (120)
                      |+++++++|+++|+++..
T Consensus       248 Di~~~~~~l~~~Gv~~l~  265 (353)
T TIGR01263       248 DIVRTVRALRARGVEFLD  265 (353)
T ss_pred             CHHHHHHHHHHcCCccCc
Confidence            999999999999999875

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.75  E-value=1.3e-07  Score=68.88  Aligned_cols=88  Identities=14%  Similarity=0.074  Sum_probs=58.3

Q ss_pred             ccchhhhhhhhhhccCceEecc-CCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEECCHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~-~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      -.|.+.+.+||++.|||+.... ...  .......+..|+..+.|.....+.....  ...++.+..|+||.|+|+++++
T Consensus        10 V~D~~~a~~~y~~~LGf~~~~~~~~~--~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~Dv~~a~   87 (353)
T TIGR01263        10 VGDAKQAAYYYFTRFGFEKVAKETGH--REKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVDDAAAAF   87 (353)
T ss_pred             eCCHHHHHHHHHHhcCCcEEEEeecC--CceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEECCHHHHH
Confidence            4567788999999999999632 111  1112233555777888875433221000  0122345789999999999999


Q ss_pred             HHHHHCCCeEEec
Q 033399           84 MILDKAGISYTLS   96 (120)
Q Consensus        84 ~~l~~~Gv~~~~~   96 (120)
                      ++++++|+++...
T Consensus        88 ~~l~~~Ga~~v~~  100 (353)
T TIGR01263        88 EAAVERGAEPVQA  100 (353)
T ss_pred             HHHHHCCCEeccC
Confidence            9999999998653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.60  E-value=1.1e-07  Score=58.14  Aligned_cols=49  Identities=24%  Similarity=0.417  Sum_probs=37.7

Q ss_pred             cceEEEEECC---HHHHHHHHHHCCCeEEecCC--CccEEEEeCCCCCeEEEEe
Q 033399           69 DRHTCIAIRD---VSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d---~d~~~~~l~~~Gv~~~~~~~--g~~~~~~~DPdGn~iEl~~  117 (120)
                      ..|++|.+++   ...........|..+.....  ....+||+||||++|||.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          85 LGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             cCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence            5799999998   66777777788888755321  1128999999999999974

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.59  E-value=1.1e-06  Score=54.59  Aligned_cols=107  Identities=18%  Similarity=0.115  Sum_probs=65.5

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCcceEEEEECC---HHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~---~~~~~~~~hi~f~v~d---~d~   81 (120)
                      +|.+.+++|| ..|||+.. ..+.  .......+..++..+.|++......-..+   ....++-.-+|+.+.+   +|+
T Consensus        12 kDL~~S~~Fy-~alGfk~N-pq~s--de~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s~eevd~   87 (133)
T COG3607          12 KDLEASKAFY-TALGFKFN-PQFS--DEDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGSREEVDE   87 (133)
T ss_pred             hhHHHHHHHH-HHhCcccC-CCcc--cccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCcHHHHHH
Confidence            4667777887 67999994 2222  11122234445666667653221100000   1112233578999874   888


Q ss_pred             HHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +.++..+.|.+...++   ......-|.|||||.+|+.-.
T Consensus        88 ~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m  127 (133)
T COG3607          88 LVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             HHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEe
Confidence            8999999999886542   335666789999999999753

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.45  E-value=1.2e-05  Score=49.69  Aligned_cols=106  Identities=16%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             eeeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            4 KYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      ..|-.+++.+.+||.++|||++..+. +     ..+++....  ..+-|-+.|...  +..-.......++-+.|++..+
T Consensus         5 vlRVnnR~~ni~FY~~~LGfkll~EE-n-----a~a~lg~~~~~erlvlEESP~~r--tr~V~G~KKl~~ivIkv~~~~E   76 (125)
T PF14506_consen    5 VLRVNNRDLNIDFYQKTLGFKLLSEE-N-----ALAILGDQQKEERLVLEESPSMR--TRAVEGPKKLNRIVIKVPNPKE   76 (125)
T ss_dssp             EEEESSHHHHHHHHTTTT--EEEEEE-T-----TEEEEE-TT--EEEEEEE--TTT---B--SSS-SEEEEEEEESSHHH
T ss_pred             eEEEcCHHHhHHHHHhccCcEEeecc-c-----cEEEecCCCCceEEEEecCCccc--cccccCcceeeEEEEEcCCHHH
Confidence            35778999999999999999996321 1     234444432  234443333321  1011111235789999987665


Q ss_pred             HHHHHHHCCCeEEe--cCCCccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~--~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +-+-| ++|..+..  ......++-..+|+|+.+.|...
T Consensus        77 Ie~LL-ar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   77 IEALL-ARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             HHHHH-HC-S--SEEEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             HHHHH-hcccccceeEEcCCceEEEEECCCCCEEEEEEc
Confidence            54443 44554433  23345667788999999999764

>PRK10148 hypothetical protein; Provisional

Probab=98.34  E-value=4.9e-05  Score=49.05  Aligned_cols=110  Identities=13%  Similarity=-0.041  Sum_probs=71.2

Q ss_pred             ceeeccchhhhhhhhhhccCceEecc-----CCCC---------------CCCceeEEEEeCCeEEEEEecCCCCCCCCC
Q 033399            3 YKYKRKKREINKHQRFNLLGLEINEA-----RPHD---------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGR   62 (120)
Q Consensus         3 ~~~~~~~~~~~~~fy~~vLG~~~~~~-----~~~~---------------~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~   62 (120)
                      |=+=.++......||.++||.++...     .|..               ....-.+-|.+++..|.+...... .    
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~-~----   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPS-G----   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCC-c----
Confidence            33445678889999999999998521     1110               011224557778877666432111 0    


Q ss_pred             CCCCCCcceEEEEECCHHH---HHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           63 PEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        63 ~~~~~~~~hi~f~v~d~d~---~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +... ...++++.++|.++   +++.| +.|.++..    ..||.+...|+||.|+.|.|...+
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~~  142 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVK  142 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEecC
Confidence            1111 23588888888776   56777 57777765    368888899999999999997643

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.17  E-value=1.4e-05  Score=59.12  Aligned_cols=87  Identities=9%  Similarity=-0.025  Sum_probs=55.5

Q ss_pred             chhhhhhhhhhccCceEecc--CCCC---CCCceeEEEEeCC--eEEEEEecCCC--CCCC-C---CCCCCCCcceEEEE
Q 033399            9 KREINKHQRFNLLGLEINEA--RPHD---KLPYRGAWLWVGA--EMIHLMELPNP--DPLS-G---RPEHGGRDRHTCIA   75 (120)
Q Consensus         9 ~~~~~~~fy~~vLG~~~~~~--~~~~---~~~~~~~~l~~g~--~~i~l~~~~~~--~~~~-~---~~~~~~~~~hi~f~   75 (120)
                      +-+....||.++|||+....  .++-   ..+..+..+..++  ..|.|.+....  .... .   ....+.+++||||.
T Consensus       190 ~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~  269 (398)
T PLN02875        190 NLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALK  269 (398)
T ss_pred             hHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEee
Confidence            45667889999999988521  1110   0123445566654  46777664321  1100 0   01123578999999


Q ss_pred             ECCHHHHHHHHHHC----CCeEEe
Q 033399           76 IRDVSKLKMILDKA----GISYTL   95 (120)
Q Consensus        76 v~d~d~~~~~l~~~----Gv~~~~   95 (120)
                      |+|+.++.++|+++    |+++..
T Consensus       270 tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        270 SDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             cCCHHHHHHHHHhccccCCeecCC
Confidence            99999999999999    999865

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=97.93  E-value=7.7e-05  Score=54.11  Aligned_cols=94  Identities=10%  Similarity=0.024  Sum_probs=58.7

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSKLK   83 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~~~   83 (120)
                      -+|.+.+++||..+|||.. ....       .+. ..++..+.++... .+     +. ...-.-+|+.+++   +|+++
T Consensus       255 V~DL~rS~~FYt~LF~~n~-Fsde-------~a~-cm~dtI~vMllt~-~D-----~~-~~~evLl~Ls~~Sre~VD~lv  318 (357)
T PRK01037        255 VQDLRRAKKFYSKMFGLEC-WDGD-------KLF-LLGKTSLYLQQTK-AE-----KK-NRGTTTLSLELECEHDFVRFL  318 (357)
T ss_pred             eCCHHHHHHHHHHHhCCCC-CCCC-------ccc-cccCcEEEEEecC-CC-----CC-CcceEEEEeccCCHHHHHHHH
Confidence            4678889999999988876 3221       111 2244433332221 11     11 1223579999985   77888


Q ss_pred             HHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEe
Q 033399           84 MILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        84 ~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++..++|......  ..|. .--|.||||+++|+.-
T Consensus       319 ~~A~aaGG~~~~~~~D~Gf-~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        319 RRWEMLGGELGEQADGHFP-LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             HHHHHcCCCCCCCcccccC-cceeECCCCCEEEEEE
Confidence            8999999866442  2343 3346899999999964

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.75  E-value=0.00015  Score=44.08  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=40.4

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEe----cCCCccEEEEeCCCC-CeEEEEeeC
Q 033399           70 RHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDA-NALEFTQVD  119 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~-~Gv~~~~----~~~g~~~~~~~DPdG-n~iEl~~~~  119 (120)
                      +|++|.|+|++++.+.+.+ .|+....    +..+.+..++.-++| ..|||+++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 9987654    245567777888888 689999864

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.72  E-value=7.6e-05  Score=49.22  Aligned_cols=85  Identities=16%  Similarity=0.206  Sum_probs=47.1

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCC--CCCC------CCCCCcceEEEEECCH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--SGRP------EHGGRDRHTCIAIRDV   79 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~--~~~~------~~~~~~~hi~f~v~d~   79 (120)
                      .+.+...++|.+.|||++.........+..++.+.+++.-|||+......+.  ..+.      ....+..++||.++|+
T Consensus         9 ~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~t~d~   88 (175)
T PF13468_consen    9 RDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYGWALRTDDI   88 (175)
T ss_dssp             TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEEEEEE-S-H
T ss_pred             CCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEEEEEecCCH
Confidence            4677778888899999997432222346677788888779999885322111  1110      1234568999999999


Q ss_pred             HHHHHHHHHCCCe
Q 033399           80 SKLKMILDKAGIS   92 (120)
Q Consensus        80 d~~~~~l~~~Gv~   92 (120)
                      ++..++|++.|+.
T Consensus        89 ~~~~~~l~~~G~~  101 (175)
T PF13468_consen   89 EAVAARLRAAGLD  101 (175)
T ss_dssp             HHHHHHHHTTT-E
T ss_pred             HHHHHHHHhcCCC
Confidence            9999999999986

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=97.55  E-value=0.00057  Score=47.83  Aligned_cols=89  Identities=21%  Similarity=0.126  Sum_probs=55.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCC-CCCCCCCCCcceEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~-~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      |-++.+..+.||.++|||+++ .+..     ...|+..|+..-|+......... ..++....+...+.+.+++-.....
T Consensus       175 ~v~~l~eA~~fY~~~LG~~~~-~~~~-----~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~~~~~~l~~  248 (265)
T COG2514         175 KVADLEEAEQFYEDVLGLEVT-ARGP-----SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHTPDPEKLDA  248 (265)
T ss_pred             EeCCHHHHHHHHHHhcCCeee-ecCC-----cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEcCCcccccc
Confidence            456788899999999999996 3321     24688889887666543333221 1112223456788888886333221


Q ss_pred             HHHHCCCeEEecCCCccEEEEeCCCCCeEEEE
Q 033399           85 ILDKAGISYTLSKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        85 ~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      .....                .||.|+.|.+.
T Consensus       249 ~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         249 TGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             cccce----------------ecCCCceEEEe
Confidence            11111                89999999875

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.42  E-value=0.00034  Score=48.34  Aligned_cols=103  Identities=19%  Similarity=0.208  Sum_probs=64.3

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEE--CCHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKL   82 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v--~d~d~~   82 (120)
                      -.|.+.++.||.+.|||++. +..   .....+.+..++.  .++|......   ..+   ..++..++|.+  +++..+
T Consensus       157 VgdL~ks~kyw~~~lgM~il-eke---ek~t~~~mgYgd~q~~LElt~~~~~---id~---~kg~griafaip~d~~~~l  226 (299)
T KOG2943|consen  157 VGDLQKSIKYWEKLLGMKIL-EKE---EKYTRARMGYGDEQCVLELTYNYDV---IDR---AKGFGRIAFAIPTDDLPKL  226 (299)
T ss_pred             ehhHHHHHHHHHHHhCcchh-hhh---hhhhhhhhccCCcceEEEEEeccCc---ccc---cccceeEEEeccccccccH
Confidence            45677788899999999995 321   2334455666654  4555433211   111   12345677766  478888


Q ss_pred             HHHHHHCCCeEEe------cCC--CccEEEEeCCCCCeEEEEeeC
Q 033399           83 KMILDKAGISYTL------SKS--GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        83 ~~~l~~~Gv~~~~------~~~--g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      .+.++..+-++..      .+.  +...+-+-||||+.|-|+...
T Consensus       227 ~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  227 QEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             HHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            8888888665533      232  245666789999999887643

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.41  E-value=0.00043  Score=50.14  Aligned_cols=86  Identities=15%  Similarity=0.111  Sum_probs=49.8

Q ss_pred             hhhhhhhhhhccCceEecc--CCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCC---CCCCCCCcceEEEEECCHHHH
Q 033399           10 REINKHQRFNLLGLEINEA--RPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSG---RPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus        10 ~~~~~~fy~~vLG~~~~~~--~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~---~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      -+.-..||+.+|||+....  -+.......+--+...+.  +|-|-+..+.....+   +...+.+++||||.++|+-++
T Consensus       180 md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA~~T~dI~~t  259 (363)
T COG3185         180 MDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIAFGTDDIYAT  259 (363)
T ss_pred             HHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEEecccHHHHH
Confidence            3455679999999998521  111001112222333333  333322221111000   112345789999999999999


Q ss_pred             HHHHHHCCCeEEe
Q 033399           83 KMILDKAGISYTL   95 (120)
Q Consensus        83 ~~~l~~~Gv~~~~   95 (120)
                      .++|+++|+++..
T Consensus       260 v~~lr~rG~~fl~  272 (363)
T COG3185         260 VAALRERGVKFLP  272 (363)
T ss_pred             HHHHHHcCCccCC
Confidence            9999999999855

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.34  E-value=0.0022  Score=41.06  Aligned_cols=103  Identities=13%  Similarity=-0.007  Sum_probs=56.9

Q ss_pred             hhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHHHHCCC
Q 033399           12 INKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI   91 (120)
Q Consensus        12 ~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv   91 (120)
                      .....|+..|||+......+    .....++-|+..+-|-..+......-...++.+..-++|+|+|.++++++..++|.
T Consensus        21 ~~l~~~~~~lGF~~~a~hrs----k~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~Da~~A~~rA~~~GA   96 (139)
T PF14696_consen   21 QALAQLFTALGFQPVARHRS----KDVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVDDAAAAYERAVALGA   96 (139)
T ss_dssp             TSCHHHHCCCCEEEECCECC----CSEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES-HHHHHHHHHHTT-
T ss_pred             HHHHHHHHHhCcceEEecCC----cceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeCCHHHHHHHHHHcCC
Confidence            34445668899999632222    12223344555555533221100000012234567899999999999999999999


Q ss_pred             eEEecC---CCccEEEEeCCCCCeEEEEee
Q 033399           92 SYTLSK---SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        92 ~~~~~~---~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +....+   .....--++-++|.++-|++.
T Consensus        97 ~~~~~~~~~~e~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   97 EPVQEPTGPGELNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             -EEEEEEETT-BEEEEEE-CCC-EEEEEE-
T ss_pred             cCcccCCCCCcEeeeeEEccCCCEEEEEec
Confidence            986642   224455577888888888775

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=96.98  E-value=0.022  Score=42.50  Aligned_cols=114  Identities=14%  Similarity=0.076  Sum_probs=65.3

Q ss_pred             eeccchhhhhhhhhhccCceEecc-CCCCCC-CceeEEEEeCCeEEEEEecCCCC--C-----CC--CCC----------
Q 033399            5 YKRKKREINKHQRFNLLGLEINEA-RPHDKL-PYRGAWLWVGAEMIHLMELPNPD--P-----LS--GRP----------   63 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~-~~~~~~-~~~~~~l~~g~~~i~l~~~~~~~--~-----~~--~~~----------   63 (120)
                      |--.++...+.+|...|||+.... .+.... ......+.-|+..+-|.....+.  .     ..  ..+          
T Consensus         6 f~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   85 (398)
T PLN02875          6 FWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSDAARRF   85 (398)
T ss_pred             EEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcHHHHHH
Confidence            345677788889989999999632 211111 11122233344444443321110  0     00  000          


Q ss_pred             --CCCCCcceEEEEECCHHHHHHHHHHCCCeEEecCC--------C-ccEEEEeCCCCCeEEEEee
Q 033399           64 --EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--------G-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        64 --~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~--------g-~~~~~~~DPdGn~iEl~~~  118 (120)
                        .++.++.-+||+|+|+++++++..++|++....+.        | ....-+.-++|.++-|++.
T Consensus        86 ~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         86 FAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             HHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence              12234567999999999999999999998866321        1 2334466777777777664

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.0048  Score=44.38  Aligned_cols=88  Identities=14%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             chhhhhhhhhhccCceEeccCC-C-CCCCceeEEEEeCCeEEEEEecCCCCC--CC-CCCCCCCCcceEEEEECCHHHHH
Q 033399            9 KREINKHQRFNLLGLEINEARP-H-DKLPYRGAWLWVGAEMIHLMELPNPDP--LS-GRPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         9 ~~~~~~~fy~~vLG~~~~~~~~-~-~~~~~~~~~l~~g~~~i~l~~~~~~~~--~~-~~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      .+-..+.||+..|||+....+- + +.......-+.-|....-+...-+++.  .. ..+.++-+..-+||+|+|.+++.
T Consensus        27 na~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~HgdgvkdvafeVeD~da~~  106 (381)
T KOG0638|consen   27 NAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVKDVAFEVEDADAIF  106 (381)
T ss_pred             CcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchhceEEEecchHHHH
Confidence            4456678999999999963221 0 000000011222332222222222211  11 11233334678999999999999


Q ss_pred             HHHHHCCCeEEec
Q 033399           84 MILDKAGISYTLS   96 (120)
Q Consensus        84 ~~l~~~Gv~~~~~   96 (120)
                      +.++++|+.+..+
T Consensus       107 ~~~va~Ga~v~~~  119 (381)
T KOG0638|consen  107 QEAVANGAKVVRP  119 (381)
T ss_pred             HHHHHcCCcccCC
Confidence            9999999998664

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.43  E-value=0.023  Score=35.59  Aligned_cols=51  Identities=20%  Similarity=0.283  Sum_probs=37.2

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecC---------------CCccEEEEeCCCC-CeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---------------~g~~~~~~~DPdG-n~iEl~~~  118 (120)
                      .++|+++.|.|++++.+...+.|.++....               .+.+..++..|+| ..|||.+.
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~   69 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKF   69 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEe
Confidence            368999999999999999888998764321               1124456666665 57898874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=95.69  E-value=0.085  Score=34.24  Aligned_cols=52  Identities=12%  Similarity=0.089  Sum_probs=38.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec-----C----------------C-CccEEEEeCCCCCeEEEEeeC
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----K----------------S-GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~-----~----------------~-g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++.|+++.|.|+++..+-.++ .|.++...     .                + ..+.+++.-++|..||+.+..
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            368999999999999998866 79876421     0                0 134556666778889999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.20  E-value=0.24  Score=29.68  Aligned_cols=50  Identities=18%  Similarity=0.056  Sum_probs=35.4

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEec---CC-CccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTLS---KS-GRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~---~~-g~~~~~~~DPdGn~iEl~~  117 (120)
                      +.+|+++.|.|++++.+..+ ..|.++...   .. ....+.+..+++..||+.+
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            36899999999999999887 489988653   11 1222334556677888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=95.16  E-value=0.41  Score=29.55  Aligned_cols=101  Identities=18%  Similarity=0.126  Sum_probs=60.8

Q ss_pred             ceeeccchhhhhhhhhhccCc-eEec--cCCCCC----CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 033399            3 YKYKRKKREINKHQRFNLLGL-EINE--ARPHDK----LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   75 (120)
Q Consensus         3 ~~~~~~~~~~~~~fy~~vLG~-~~~~--~~~~~~----~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~   75 (120)
                      |=|=.+..+....||.++||- ++..  .-|+..    ...-.+.+.+++..+........     .+.  +....+++.
T Consensus         6 yL~F~g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~-----~~~--~~~~sl~i~   78 (116)
T PF06983_consen    6 YLWFNGNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPD-----FPF--GNNISLCIE   78 (116)
T ss_dssp             EEEESS-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS-----------TTEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCC-----CCC--CCcEEEEEE
Confidence            334457788889999999994 3321  122211    12234567888888777654311     011  123588899


Q ss_pred             ECCH---HHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEE
Q 033399           76 IRDV---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        76 v~d~---d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++|.   +.++++|.+.|-     .++ ..-.+.|.-|..+.|+
T Consensus        79 ~~~~ee~~~~f~~Ls~gG~-----~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   79 CDDEEEIDRIFDKLSEGGQ-----WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             ESSHHHHHHHHHHHHTTTE-----TCC-EEEEEE-TTS-EEEEE
T ss_pred             cCCHHHHHHHHHHHHcCCC-----ccc-eeEEEEeCCCCEEEeC
Confidence            9874   456788877776     334 7778999999999875

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=95.07  E-value=0.12  Score=29.88  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHHCCCeEEe---cCCCccEEEEeCCCCCeEEEEe
Q 033399           78 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~---~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +.+++.+.|++.|+++..   ...+...+...|+||+.+|+.-
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            799999999999998766   2456788889999999999964

This is family M4 in the peptidase classification.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.89  E-value=0.21  Score=32.27  Aligned_cols=50  Identities=10%  Similarity=0.096  Sum_probs=34.5

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeC-CCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~D-PdGn~iEl~~~  118 (120)
                      ++|+++.|.|+++..+-..+ .|.++.....+...++..+ .++..|+|.+.
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            58999999999999998865 5888765433322222222 35788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=94.85  E-value=0.056  Score=35.50  Aligned_cols=47  Identities=26%  Similarity=0.280  Sum_probs=27.4

Q ss_pred             cceEEEEECCHHHHHHHH-HHCCCeEEec----CCCc--cEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMIL-DKAGISYTLS----KSGR--PAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l-~~~Gv~~~~~----~~g~--~~~~~~DPdGn~iEl~~~  118 (120)
                      +.|+.+.|+|++++.+++ +..|..+...    .+|.  ..++|  +++ .|||+..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i   54 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAI   54 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEe
Confidence            369999999999999999 8889998762    2343  44554  677 9999874

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.61  E-value=0.2  Score=29.23  Aligned_cols=50  Identities=12%  Similarity=0.149  Sum_probs=34.1

Q ss_pred             cceEEEEECCHHHHHHHHH-HCCCeEEecCC-CccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILD-KAGISYTLSKS-GRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~~~-g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++.|+|++++.+... -.|.+...... .....++..+++..++|.+.
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            3799999999999998875 77877654322 12334555555557787754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.41  E-value=0.43  Score=28.63  Aligned_cols=50  Identities=20%  Similarity=0.249  Sum_probs=34.4

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++.|+|+++..+-..+ .|.+....    ..+....|+.-++|..++|.+.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            47999999999999988766 58876431    2233344554446778888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.32  E-value=0.45  Score=28.54  Aligned_cols=50  Identities=18%  Similarity=0.248  Sum_probs=35.7

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEec---CC--CccEEEEeCC---CCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLS---KS--GRPAIFTRDP---DANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~~--g~~~~~~~DP---dGn~iEl~~~  118 (120)
                      ++|+++.|+|++++.+..++ .|.+....   ..  +...+++.+.   .+..++|.+.
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            57999999999999998875 69887653   11  1234555554   5678888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.24  E-value=0.38  Score=29.23  Aligned_cols=49  Identities=14%  Similarity=0.174  Sum_probs=33.8

Q ss_pred             cceEEEEECCHHHHHHHHHHC----CCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~----Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++.|+|++++.+...+.    |.+......+ ...|+...++..|+|.+.
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            589999999999999988776    8887664322 223333345567777653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=94.18  E-value=0.054  Score=39.18  Aligned_cols=85  Identities=15%  Similarity=0.095  Sum_probs=50.2

Q ss_pred             hhhhhhhhhhccCceEeccCCCCCCCce--e--EE-EEeCCeEEEEEecCCCCCCCCC---------CCCCCCcceEEEE
Q 033399           10 REINKHQRFNLLGLEINEARPHDKLPYR--G--AW-LWVGAEMIHLMELPNPDPLSGR---------PEHGGRDRHTCIA   75 (120)
Q Consensus        10 ~~~~~~fy~~vLG~~~~~~~~~~~~~~~--~--~~-l~~g~~~i~l~~~~~~~~~~~~---------~~~~~~~~hi~f~   75 (120)
                      .+-...||.+.|||.....-++...+..  .  +| +...+..|.+ ..+++.+....         .-.+++++|||+.
T Consensus       191 m~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~m-pinEp~~G~k~ksQIqeyv~y~gG~GvQHiaL~  269 (381)
T KOG0638|consen  191 MESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKM-PINEPAPGKKKKSQIQEYVEYHGGAGVQHIALN  269 (381)
T ss_pred             chHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEE-eccCCCCCCccHHHHHHHHHhcCCCceeeeeec
Confidence            3456779999999998543333111110  0  11 2222333333 22332221111         1123568999999


Q ss_pred             ECCHHHHHHHHHHCCCeEEe
Q 033399           76 IRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      ++|+=++.+.|+++|.++..
T Consensus       270 tedIi~Ai~~lr~rG~eFLs  289 (381)
T KOG0638|consen  270 TEDIIEAIRGLRARGGEFLS  289 (381)
T ss_pred             chHHHHHHHHHHhcCCcccc
Confidence            99999999999999999965

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=94.00  E-value=0.34  Score=27.87  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.9

Q ss_pred             eEEEEECCHHHHHHHHHH-CCCeEEecCC--CccEEEEeCCCCCeEEEEeeC
Q 033399           71 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        71 hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~--g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+.+.|.|++++.+.+.+ .|.+......  ....+++.++ +..|+|.+..
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            889999999999999987 9998876532  3456666665 7888887643

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.65  E-value=0.5  Score=27.89  Aligned_cols=47  Identities=13%  Similarity=0.157  Sum_probs=34.0

Q ss_pred             eEEEEECCHHHHHHHHHH-CCCeEEecC---CCccEEEEeCCCC--CeEEEEe
Q 033399           71 HTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDA--NALEFTQ  117 (120)
Q Consensus        71 hi~f~v~d~d~~~~~l~~-~Gv~~~~~~---~g~~~~~~~DPdG--n~iEl~~  117 (120)
                      |+++.|.|++++.+..++ .|.++....   .+...+.+.+|++  ..++|.+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAP   53 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeC
Confidence            899999999999998876 899887632   3445556667764  3555554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=93.65  E-value=0.5  Score=28.45  Aligned_cols=49  Identities=16%  Similarity=0.142  Sum_probs=35.8

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|++|.|+|++++.+...+ .|.+.....     .+...+++.. ++..++|.+.
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   55 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEP   55 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEE
Confidence            36999999999999998876 888876521     1234455553 6788888875

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=93.61  E-value=0.4  Score=32.08  Aligned_cols=51  Identities=18%  Similarity=0.173  Sum_probs=38.3

Q ss_pred             CcceEEEEEC--CHHHHHHHHHH-CCCeEEec------CCCccEEEEeCCCC-CeEEEEee
Q 033399           68 RDRHTCIAIR--DVSKLKMILDK-AGISYTLS------KSGRPAIFTRDPDA-NALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~--d~d~~~~~l~~-~Gv~~~~~------~~g~~~~~~~DPdG-n~iEl~~~  118 (120)
                      .++|+++.|+  |++++.+..++ .|.+....      ..+.++..+..|+| ..|+|.++
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~   63 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEP   63 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecC
Confidence            3689999999  99999998854 88877542      13466778888875 56788764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=93.49  E-value=0.85  Score=27.98  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.8

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCC--CCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DP--dGn~iEl~~~  118 (120)
                      +.|+.+.|+|++++.+...+ .|.++.....+....|+..+  .+..+++.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999998876 89887664332244555543  3456776653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=93.35  E-value=0.51  Score=28.43  Aligned_cols=46  Identities=15%  Similarity=0.248  Sum_probs=29.7

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEE
Q 033399           70 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  115 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl  115 (120)
                      +|+++.|+|+++..+-.+..|.++.........+.+.-++|..|.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            6999999999999998887888765432211223344444544443

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=93.15  E-value=0.62  Score=27.83  Aligned_cols=48  Identities=23%  Similarity=0.318  Sum_probs=34.2

Q ss_pred             ceEEEEECCHHHHHHHHHHC-CCeEEec---CC-CccEEEEeCCC---CCeEEEEe
Q 033399           70 RHTCIAIRDVSKLKMILDKA-GISYTLS---KS-GRPAIFTRDPD---ANALEFTQ  117 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~-Gv~~~~~---~~-g~~~~~~~DPd---Gn~iEl~~  117 (120)
                      .|+++.|.|++++.+..++. |.++...   .. +...+++..++   +..+++.+
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~   57 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTY   57 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEe
Confidence            69999999999999999764 9987652   22 23345555554   57788764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.98  E-value=1  Score=27.14  Aligned_cols=48  Identities=6%  Similarity=0.042  Sum_probs=33.5

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCC-CCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPd-Gn~iEl~~~  118 (120)
                      ++|+.+.|+|++++.+...+ .|.++.....  ..+++..++ +..|.|.+.
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~~   52 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEED   52 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEeC
Confidence            57999999999999998875 7988876532  234444444 456666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=92.60  E-value=1.1  Score=27.82  Aligned_cols=48  Identities=8%  Similarity=0.117  Sum_probs=33.0

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecC--CCccEEEEeCCCCCeEEEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSK--SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~--~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++|+++.|+|++++.+..++ .|.++....  .+....++.+ ++..++|.+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~-g~~~l~l~~   51 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQ-GDINFVLNS   51 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEc-CCEEEEEec
Confidence            37999999999999999988 999886632  1233344433 345566654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=91.87  E-value=2.5  Score=28.29  Aligned_cols=28  Identities=18%  Similarity=0.096  Sum_probs=23.9

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      ..+|+++.|.|+++.++-.. ..|.++..
T Consensus        27 ~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~   55 (185)
T PLN03042         27 IMQQTMFRIKDPKASLDFYSRVLGMSLLK   55 (185)
T ss_pred             EEEEEEEeeCCHHHHHHHHHhhcCCEEEE
Confidence            56899999999999999775 57998755

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=91.42  E-value=1.5  Score=26.05  Aligned_cols=29  Identities=10%  Similarity=0.195  Sum_probs=24.7

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~   96 (120)
                      .+.|+++.|+|++++.+.....|.++...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            36899999999999999888889888653

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF15067 FAM124: FAM124 family

Probab=91.37  E-value=0.61  Score=32.35  Aligned_cols=92  Identities=18%  Similarity=0.125  Sum_probs=48.9

Q ss_pred             hhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEE--EecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399           10 REINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHL--MELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus        10 ~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l--~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      =+-+..||.-+|+=+....+++    +-..-+.. .+..|.|  =..+.    ...+... ...-+.|.|.|+-+++--|
T Consensus       141 ~~d~vr~Yelil~~~~~~~k~~----FC~F~lys~~~~~iQlsLK~lp~----~~~p~p~-esavLqF~V~~igqLvpLL  211 (236)
T PF15067_consen  141 YEDMVRFYELILQREPTQQKED----FCFFTLYSQPGLDIQLSLKQLPP----GMSPEPT-ESAVLQFRVEDIGQLVPLL  211 (236)
T ss_pred             HHHHHHHHHHHhccCcceeeCC----cEEEEEecCCCeEEEEEeccCCC----CCCcccc-cceEEEEEecchhhhcccC
Confidence            3567789999999888533332    21111222 2333333  22321    1112211 2357999999999887665


Q ss_pred             HHCCCeEEecCCCccEEEEeCCCCCeEEE
Q 033399           87 DKAGISYTLSKSGRPAIFTRDPDANALEF  115 (120)
Q Consensus        87 ~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl  115 (120)
                      =.--.++....|     -..|||||.|-|
T Consensus       212 Pnpc~PIS~~rW-----qT~D~DGNkILL  235 (236)
T PF15067_consen  212 PNPCSPISETRW-----QTEDYDGNKILL  235 (236)
T ss_pred             CCCcccccCCcc-----eeeCCCCCEecc
Confidence            332222222222     258999999854

>PRK11478 putative lyase; Provisional

Probab=91.35  E-value=1.6  Score=26.41  Aligned_cols=50  Identities=12%  Similarity=-0.016  Sum_probs=32.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecC--C--CccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK--S--GRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~--~--g~~~~~~~DPdGn~iEl~~  117 (120)
                      +.+|+++.|+|++++.+..++ .|.++....  .  +.....+.-.++..+|+.+
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~   60 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFS   60 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEE
Confidence            368999999999999998854 798875321  1  1111112223456788775

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.98  E-value=1.7  Score=25.82  Aligned_cols=29  Identities=14%  Similarity=0.225  Sum_probs=24.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      +++|+.+.|+|+++..+-.++ .|.+....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~   32 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRF   32 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecc
Confidence            368999999999999998877 79887664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=90.68  E-value=1.9  Score=25.88  Aligned_cols=49  Identities=14%  Similarity=0.176  Sum_probs=33.5

Q ss_pred             cceEEEEECCHHHHHHHHH-HCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILD-KAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +.|+++.|+|++++.+..+ ..|.++...    ..+.... +..+++..|+|.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVV-FIALGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEE-EEecCCEEEEEEec
Confidence            5799999999999999887 478887542    1233333 33344677888653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=90.31  E-value=2.6  Score=25.38  Aligned_cols=47  Identities=13%  Similarity=0.097  Sum_probs=30.9

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCC-CCeEEEE
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFT  116 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPd-Gn~iEl~  116 (120)
                      +.|+++.|+|++++.+-..+ .|.+......+ ..+|+..++ +..+.+.
T Consensus         3 l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           3 LGYLGVESSDLDAWRRFATDVLGLQVGDRPED-GALYLRMDDRAWRIAVH   51 (120)
T ss_pred             ccEEEEEeCCHHHHHHHHHhccCceeccCCCC-CeEEEEccCCceEEEEE
Confidence            57999999999999998866 68877554222 234444433 3444443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=90.15  E-value=2.7  Score=25.99  Aligned_cols=49  Identities=18%  Similarity=0.240  Sum_probs=33.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCC---CCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD---ANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPd---Gn~iEl~~  117 (120)
                      .+.|+++.|+|+++..+-.++ .|.++...... ...|+.-++   ...|++..
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-~~~~~~~~~~~~~~~i~l~~   55 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-RGAFLRAAGGGDHHNLFLIK   55 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-cEEEEECCCCCCCcEEEEec
Confidence            468999999999999998865 69887653222 234555432   35666654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.84  E-value=2.6  Score=25.29  Aligned_cols=47  Identities=15%  Similarity=0.242  Sum_probs=31.6

Q ss_pred             ceEEEEECCHHHHHHHHHH----CCCeEEecCCCccEEEEeCCC-CCeEEEEe
Q 033399           70 RHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  117 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~----~Gv~~~~~~~g~~~~~~~DPd-Gn~iEl~~  117 (120)
                      .|+++.|.|++++.+-.++    .|.+......+. .+++..++ +..+.|..
T Consensus         2 ~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~-~~~~~~~~~~~~~~l~~   53 (123)
T cd07262           2 DHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPG-AVGYGKGGGGPDFWVTK   53 (123)
T ss_pred             cEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCc-eeEeccCCCCceEEEec
Confidence            6999999999999988877    588876543122 23344443 45566654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=89.59  E-value=3.8  Score=30.27  Aligned_cols=93  Identities=14%  Similarity=0.108  Sum_probs=53.2

Q ss_pred             hhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCC--CCCCCCCCCcceEEEEECCHHHHHHHHHHC
Q 033399           12 INKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--SGRPEHGGRDRHTCIAIRDVSKLKMILDKA   89 (120)
Q Consensus        12 ~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~--~~~~~~~~~~~hi~f~v~d~d~~~~~l~~~   89 (120)
                      ....-++..|||+.......     ..+.+.-.+ .|.|+-...+...  .....++.+..-++|.|+|.+.++++..+.
T Consensus        35 ~~l~~l~~~lGF~~~~~Hrs-----k~v~l~rQG-dinlvvn~~~~s~a~~f~~~Hgps~~a~a~~V~DA~~A~a~A~a~  108 (363)
T COG3185          35 EALGALLGQLGFTAVAKHRS-----KAVTLYRQG-DINLVVNAEPDSFAAEFLDKHGPSACAMAFRVDDAEQALARALAL  108 (363)
T ss_pred             HHHHHHHHHhCccccccccc-----cceeEEEeC-CEEEEEcCCCcchhhHHHHhcCCchheeEEeeCCHHHHHHHHHHc
Confidence            33445678999999632222     134444322 2333332222210  001123334578999999999999999999


Q ss_pred             CCeEEec-------------CCCccEEEEeCCCC
Q 033399           90 GISYTLS-------------KSGRPAIFTRDPDA  110 (120)
Q Consensus        90 Gv~~~~~-------------~~g~~~~~~~DPdG  110 (120)
                      |.+....             .-|...+||-|+.|
T Consensus       109 gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185         109 GARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             CCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            9955331             13456678888773

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=88.84  E-value=3.3  Score=24.38  Aligned_cols=47  Identities=13%  Similarity=0.208  Sum_probs=32.7

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCC-C-CCeEEEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP-D-ANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DP-d-Gn~iEl~~  117 (120)
                      +.|+.|.|+|+++..+-.++ .|.++.....  ..+|+..+ + ...+.+.+
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~   52 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRDA--GSVYLRCSEDDHHSLVLTE   52 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeecC--CeEEEecCCCCcEEEEEEe
Confidence            57999999999999998887 8888876432  24555554 2 33444443

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>PLN02367 lactoylglutathione lyase

Probab=87.51  E-value=4.9  Score=28.03  Aligned_cols=28  Identities=18%  Similarity=0.066  Sum_probs=23.7

Q ss_pred             CcceEEEEECCHHHHHHHH-HHCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMIL-DKAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l-~~~Gv~~~~   95 (120)
                      ...|.+++|.|+++.++-. +..|.++..
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~  103 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLK  103 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeE
Confidence            4689999999999999877 458998765

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=87.49  E-value=2.5  Score=25.08  Aligned_cols=27  Identities=19%  Similarity=0.240  Sum_probs=23.0

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      ++|+++.|.|++++.+...+ .|.++..
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~   29 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVE   29 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEe
Confidence            58999999999999987765 7888765

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

Probab=87.44  E-value=3.5  Score=23.27  Aligned_cols=36  Identities=14%  Similarity=0.057  Sum_probs=27.8

Q ss_pred             HHHHHHHHHHCCCeEEec----C--CCccEEEEeCCCCCeEE
Q 033399           79 VSKLKMILDKAGISYTLS----K--SGRPAIFTRDPDANALE  114 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~----~--~g~~~~~~~DPdGn~iE  114 (120)
                      +..+.+-|.+.|+.+...    .  .-.-.||+.|++|+.|+
T Consensus        15 L~~i~~~l~~~gl~I~~AkIsT~Gerv~DvFyV~d~~g~kl~   56 (72)
T cd04895          15 LLEAVQVLTDLDLCITKAYISSDGGWFMDVFHVTDQLGNKLT   56 (72)
T ss_pred             HHHHHHHHHHCCcEEEEEEEeecCCeEEEEEEEECCCCCCCC
Confidence            667788899999999762    1  22477999999998763

This CD includes the N-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain

Probab=87.15  E-value=3.9  Score=25.03  Aligned_cols=52  Identities=23%  Similarity=0.348  Sum_probs=36.4

Q ss_pred             cceEEEEE------CCHHHHHHHHHHCCCeEEe--c----------CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           69 DRHTCIAI------RDVSKLKMILDKAGISYTL--S----------KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        69 ~~hi~f~v------~d~d~~~~~l~~~Gv~~~~--~----------~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      ..-+++.+      ++.+++.+.++++++.+..  .          ..+....|+.|++|+++....-+|
T Consensus        57 ~~vi~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~D~~~~~~~~~~v~~~P~~~vid~~G~v~~~~~G~~  126 (126)
T cd03012          57 LVVIGVHSPEFAFERDLANVKSAVLRYGITYPVANDNDYATWRAYGNQYWPALYLIDPTGNVRHVHFGEG  126 (126)
T ss_pred             eEEEEeccCccccccCHHHHHHHHHHcCCCCCEEECCchHHHHHhCCCcCCeEEEECCCCcEEEEEecCC
Confidence            34555554      3577788888898887632  1          134578899999999998776554

Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.43  E-value=6.9  Score=24.49  Aligned_cols=27  Identities=11%  Similarity=0.075  Sum_probs=22.9

Q ss_pred             cceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           69 DRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      ..|+++.|.|++..++--. ..|.+...
T Consensus         3 ~~Hv~irV~DlerSi~FY~~vLG~~~~~   30 (127)
T cd08358           3 ALHFVFKVGNRNKTIKFYREVLGMKVLR   30 (127)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEe
Confidence            5799999999999999884 58998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=84.88  E-value=2.6  Score=22.31  Aligned_cols=25  Identities=16%  Similarity=0.271  Sum_probs=22.3

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeE
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISY   93 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~   93 (120)
                      ...+.|.+++.+.+.+.|+++|+++
T Consensus        40 ~~~v~~~ve~~~~~~~~L~~~G~~v   64 (65)
T cd04882          40 KALLIFRTEDIEKAIEVLQERGVEL   64 (65)
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCceE
Confidence            3678999999999999999999875

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=84.74  E-value=7.7  Score=24.45  Aligned_cols=28  Identities=18%  Similarity=0.207  Sum_probs=22.9

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      .+.|+++.|+|++++.+-.+ ..|.++..
T Consensus         4 ~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~   32 (144)
T cd07239           4 KISHVVLNSPDVDKTVAFYEDVLGFRVSD   32 (144)
T ss_pred             eeeEEEEECCCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999998884 47877654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=84.55  E-value=8.2  Score=24.58  Aligned_cols=50  Identities=12%  Similarity=0.170  Sum_probs=33.6

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---C----CCccEEEEe-CCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K----SGRPAIFTR-DPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~----~g~~~~~~~-DPdGn~iEl~~  117 (120)
                      ++.|+++.|+|++++.+-..+ .|.++...   .    .+....|++ ++....|.+.+
T Consensus         9 ~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~   67 (154)
T cd07237           9 GLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAE   67 (154)
T ss_pred             ccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEc
Confidence            578999999999999998865 88887542   1    122344443 44556666644

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=84.31  E-value=7.4  Score=23.93  Aligned_cols=27  Identities=7%  Similarity=0.036  Sum_probs=22.2

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      ++|+++.|+|++++.+...+ .|.++..
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~   28 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLV   28 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEec
Confidence            36999999999999988875 5877654

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=83.78  E-value=6.5  Score=25.02  Aligned_cols=27  Identities=11%  Similarity=0.073  Sum_probs=22.6

Q ss_pred             cceEEEEECCHHHHHHHH-HHCCCeEEe
Q 033399           69 DRHTCIAIRDVSKLKMIL-DKAGISYTL   95 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l-~~~Gv~~~~   95 (120)
                      +.|+++.|+|+++..+.. +..|.++..
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~   29 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSD   29 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEe
Confidence            579999999999998877 458988754

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.74  E-value=7.3  Score=23.41  Aligned_cols=26  Identities=12%  Similarity=0.280  Sum_probs=22.2

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEe
Q 033399           70 RHTCIAIRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      .++.+.|+|+++..+-.+..|.+...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~   27 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNP   27 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEcc
Confidence            47899999999999988888888754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=83.66  E-value=6.8  Score=22.98  Aligned_cols=27  Identities=11%  Similarity=0.073  Sum_probs=22.8

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           70 RHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      .|+++.|.|+++..+-..+ .|.++...
T Consensus         2 ~hi~l~v~d~~~s~~FY~~~lG~~~~~~   29 (114)
T cd07247           2 VWFELPTTDPERAKAFYGAVFGWTFEDM   29 (114)
T ss_pred             EEEEeeCCCHHHHHHHHHhccCceeeec
Confidence            6999999999999998876 49887653

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=82.95  E-value=8.3  Score=23.53  Aligned_cols=48  Identities=19%  Similarity=0.260  Sum_probs=31.7

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEecCC--C-ccEEEEeCCC-CCeEEEEe
Q 033399           70 RHTCIAIRDVSKLKMILDK-AGISYTLSKS--G-RPAIFTRDPD-ANALEFTQ  117 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~--g-~~~~~~~DPd-Gn~iEl~~  117 (120)
                      .|+++.|.|++++.+-..+ .|.+......  + ....|++..+ +..+++..
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFP   53 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEc
Confidence            4999999999999998865 7988754211  2 2344555433 34566654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=82.78  E-value=8  Score=23.12  Aligned_cols=29  Identities=14%  Similarity=0.151  Sum_probs=24.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      ++.|++|.|+|++++.+-..+ .|.++...
T Consensus         4 ~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~   33 (122)
T cd07265           4 RPGHVQLRVLDLEEAIKHYREVLGLDEVGR   33 (122)
T ss_pred             eEeEEEEEeCCHHHHHHHHHhccCCEeeee
Confidence            368999999999999998865 89887654

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=82.02  E-value=8.6  Score=22.98  Aligned_cols=47  Identities=13%  Similarity=0.195  Sum_probs=31.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeC-C--CCCeEEEE
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-P--DANALEFT  116 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~D-P--dGn~iEl~  116 (120)
                      .++|+++.|+|++++.+-..+ .|.++.....  ..+|++- +  ....+++.
T Consensus         6 ~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~--~~~~l~~~~~~~~~~~~l~   56 (121)
T cd09013           6 HLAHVELLTPKPEESLWFFTDVLGLEETGREG--QSVYLRAWGDYEHHSLKLT   56 (121)
T ss_pred             EeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC--CeEEEEeccCCCccEEEEe
Confidence            468999999999999998876 4888765432  2344542 2  23455554

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=81.61  E-value=9.1  Score=23.01  Aligned_cols=48  Identities=19%  Similarity=0.268  Sum_probs=30.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ...|+++.|.|++++.+-.++ .|.+..... +. ..++.-.+|..+++..
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~-~~-~~~~~~~~~~~l~~~~   52 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPF-GP-FAVVKLDNGVSLDFAQ   52 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeecc-CC-EEEEEcCCCcEEEEec
Confidence            358999999999999988854 588776532 21 2233333455555544

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=81.56  E-value=9.4  Score=23.13  Aligned_cols=47  Identities=15%  Similarity=0.211  Sum_probs=30.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEe-CCCCCeEEEE
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFT  116 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~-DPdGn~iEl~  116 (120)
                      .+.|+++.|+|++++.+...+ .|.+......+  .+|+. ++++..+-+.
T Consensus         6 ~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~i~l~   54 (124)
T cd08361           6 DIAYVRLGTRDLAGATRFATDILGLQVAERTAK--ATYFRSDARDHTLVYI   54 (124)
T ss_pred             EeeEEEEeeCCHHHHHHHHHhccCceeccCCCC--eEEEEcCCccEEEEEE
Confidence            357999999999999998876 58887554222  33443 3344444443

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=80.92  E-value=10  Score=23.22  Aligned_cols=28  Identities=14%  Similarity=0.208  Sum_probs=23.2

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      +++|+++.|+|+++..+-..+ .|.+...
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~   32 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVY   32 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEE
Confidence            468999999999999988865 8887644

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=80.77  E-value=11  Score=23.36  Aligned_cols=28  Identities=14%  Similarity=0.309  Sum_probs=23.1

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      ++.|+++.|+|++++.+-.. ..|.++..
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~   32 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLV   32 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEe
Confidence            36899999999999999885 47877754

>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]

Probab=80.66  E-value=12  Score=24.56  Aligned_cols=48  Identities=21%  Similarity=0.222  Sum_probs=39.0

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEe------------c----C--------CCccEEEEeCCCCCeEEEE
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTL------------S----K--------SGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~------------~----~--------~g~~~~~~~DPdGn~iEl~  116 (120)
                      ...+++++|+.++..+-.+++|+++.-            .    .        .-.|+.|+.||||.+..+.
T Consensus        65 a~V~GIS~Ds~~~~~~F~~k~~L~f~LLSD~~~~v~~~ygv~~~k~~~gk~~~~~~R~TfvId~dG~I~~~~  136 (157)
T COG1225          65 AVVLGISPDSPKSHKKFAEKHGLTFPLLSDEDGEVAEAYGVWGEKKMYGKEYMGIERSTFVIDPDGKIRYVW  136 (157)
T ss_pred             CEEEEEeCCCHHHHHHHHHHhCCCceeeECCcHHHHHHhCcccccccCccccccccceEEEECCCCeEEEEe
Confidence            478999999999999999999998743            0    0        1248899999999998876

>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed

Probab=80.66  E-value=8.9  Score=24.23  Aligned_cols=49  Identities=20%  Similarity=0.192  Sum_probs=36.1

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEe--c-------CCC---------------ccEEEEeCCCCCeEEEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTL--S-------KSG---------------RPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~--~-------~~g---------------~~~~~~~DPdGn~iEl~~  117 (120)
                      ..-+++.+++.+++.+.+++.|+++..  .       ..|               .+..|+.||+|.++....
T Consensus        65 v~vi~Is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~  137 (154)
T PRK09437         65 VVVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVAEQFGVWGEKKFMGKTYDGIHRISFLIDADGKIEHVFD  137 (154)
T ss_pred             CEEEEEcCCCHHHHHHHHHHhCCCCeEEECCCchHHHHhCCCcccccccccccCcceEEEEECCCCEEEEEEc
Confidence            567888888888888888888887633  1       011               145689999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-17
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-17
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	4e-14
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-11
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-09
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	3e-09
3ghj_A	141	Putative integron gene cassette protein; integron	4e-09
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-07
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-07
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	9e-07
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	9e-07
3huh_A	152	Virulence protein STM3117; structural genomics, ny	2e-06
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-05
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-05
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-04
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-04
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-04
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	6e-04
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-04
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	8e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 72.1 bits (177), Expect = 1e-17
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
             LG E+       +       L +G++ + +            PE  G  RH    +  
Sbjct: 25  EKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGL-RHLAFKVEH 83

Query: 79  VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ 117
           + ++   L++ GI     +    +G+   F  DPD   LE  +
Sbjct: 84  IEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 71.0 bits (174), Expect = 3e-17
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
             +G+E    +P +     G W   G + IH+    N +P         +  H    +  
Sbjct: 32  ETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQNFNP--------AKRAHPAFYVLK 82

Query: 79  VSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQ 117
           + + K  L K GI      +       +  DP  N +EF +
Sbjct: 83  IDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 62.8 bits (153), Expect = 4e-14
 Identities = 23/110 (20%), Positives = 31/110 (28%), Gaps = 11/110 (10%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------ELPNPDPLSGRPEHGGRDRH 71
           N LG E+       K       L  G   + +            P      P      RH
Sbjct: 25  NQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRH 84

Query: 72  TCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPDANALEFTQ 117
               + DV   +  L   GI          +G+   F  DPD   LE  +
Sbjct: 85  LAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 55.9 bits (135), Expect = 2e-11
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 12/100 (12%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR- 77
            LLGL ++           GA+L  G   + L            P       H    +  
Sbjct: 24  ELLGLTLHARWNT------GAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAE 74

Query: 78  -DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 115
            D   L   L++AG++    +KS   + +  DPD + LE 
Sbjct: 75  EDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 51.3 bits (123), Expect = 1e-09
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 11/98 (11%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
           +LLG  +      +    +GA+L +G+  + L   P      G P          IA  D
Sbjct: 24  DLLGFRL------EARWDQGAYLELGSLWLCLSREPQY----GGPAADYTHYAFGIAAAD 73

Query: 79  VSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 115
            ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 74  FARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 50.6 bits (121), Expect = 3e-09
 Identities = 19/111 (17%), Positives = 31/111 (27%), Gaps = 13/111 (11%)

Query: 19  NLLGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEH-GGRDR 70
            +LGL                   + A        ++ L   P   P    PE    R  
Sbjct: 39  TILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTFTRAY 98

Query: 71  HTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTRDPDANALEFT 116
           H    I      + +  + +  I+       RP    ++  DPD   +E  
Sbjct: 99  HLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIR 149

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 50.0 bits (120), Expect = 4e-09
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 18/104 (17%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI-- 76
            +LG E        +  +   W+   A M+ L E           +   + +H    +  
Sbjct: 48  EILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE----------EKENWQQQHFSFRVEK 95

Query: 77  RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 116
            ++  LK  L+  G+S     +       +++  DP+ +ALEFT
Sbjct: 96  SEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFT 139

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.9 bits (109), Expect = 2e-07
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDR-HTCI 74
           ++ GLE        KLP +  +   G +M+ L +       D  +  P HG   + H C 
Sbjct: 28  DVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFCF 82

Query: 75  AIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEFTQ 117
                 +V + K   +   I    Y    +G  +++ RDP  N++E  +
Sbjct: 83  YADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGE 131

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 45.1 bits (107), Expect = 3e-07
 Identities = 21/102 (20%), Positives = 33/102 (32%), Gaps = 7/102 (6%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
            +L  +       D   +       G   I L E              G D H   ++  
Sbjct: 25  EILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGGGTDLFDETRPGLD-HLSFSVES 82

Query: 79  VSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDANALEF 115
           ++ L ++   L KAG ++T          +  RD D  ALE 
Sbjct: 83  MTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEA 124

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 43.6 bits (103), Expect = 9e-07
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP---LSGRPEHGGRDRHTCIA 75
           N+LG +++EA P  +      ++ +G   + L+     D       +    G   H CI 
Sbjct: 25  NILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIE 84

Query: 76  IRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPDANALEFTQ 117
           + +++   M L K  I        +   G+P IF   +D     +E  Q
Sbjct: 85  VDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ 133

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 13/106 (12%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
            +LG      + +         L  GA+ I+L +              G      I    
Sbjct: 43  EVLGFSAVTFKQNR------KALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITSTP 96

Query: 79  VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDANALEFTQ 117
           ++ +   + +AGIS       R        +I+ RDPD N +E +Q
Sbjct: 97  INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQ 142

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 13/104 (12%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
            +LG++                L  G + I+L +L N      +    G      I    
Sbjct: 30  KVLGMKAVSFGAG------RIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDTV 83

Query: 79  VSKLKMILDKAGISYTLSKSGR-------PAIFTRDPDANALEF 115
           +S     ++  G++       R        + + RDPD N +E 
Sbjct: 84  LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEV 127

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-PLSGRPEHGGRDRHTCIAIR 77
            L  +E +E    +       ++  G   + L+     D P++   + G    H C  + 
Sbjct: 27  RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVE 86

Query: 78  DVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANALEFTQ 117
           D+ K    + + G +         +   R   F    D   +E  +
Sbjct: 87  DIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE 132

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 10/106 (9%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR 77
              G   N+   +    +   +L       + +M   +    +     G    H  I+  
Sbjct: 23  TYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWA--HIAISTG 80

Query: 78  DVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDANALEFT 116
               +  +   L + G +      ++  G       DP+ N +E T
Sbjct: 81  TKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT 126

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 11/102 (10%)

Query: 19  NLLGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR 77
            +       A   ++    R  +  +G   + +M+           E         I   
Sbjct: 24  GVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------AERSYNHIAFKIDDA 77

Query: 78  DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF 115
           D  +    + K G+     +        +I+  D D +  E 
Sbjct: 78  DFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFEL 119

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 13/104 (12%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
            +LG+E+   +           L  G +  +L E+             G      I    
Sbjct: 47  KILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVP 100

Query: 79  VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDANALEF 115
           + ++   L    +        R        +I+ RDPD N +E 
Sbjct: 101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEV 144

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 21/115 (18%)

Query: 19  NLLGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSGRPEHG-GRDRHTCI 74
           ++LG E+   RP ++  Y    G  +     M+  +   +   LSG  E   G   +   
Sbjct: 25  DVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSGDLEFPLGSGVNFQW 79

Query: 75  AIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDPDANALEFTQ 117
            + D+  L   ++++                  S + +     + PD     F Q
Sbjct: 80  DVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQ 134

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 36.3 bits (84), Expect = 6e-04
 Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 11/102 (10%)

Query: 19  NLLGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR 77
           N+   E   +         +  +  +    I +ME  +        E         I   
Sbjct: 24  NIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------QERTYNHIAFQIQSE 77

Query: 78  DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF 115
           +V +    +   G+     +        +I+  D D +  E 
Sbjct: 78  EVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFEL 119

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 36.4 bits (84), Expect = 6e-04
 Identities = 13/112 (11%), Positives = 28/112 (25%), Gaps = 11/112 (9%)

Query: 16  QRFNLLGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPEHGGRD---R 70
            R N+ G                A +    G   I L     P  ++             
Sbjct: 38  GRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPVNALGYL 97

Query: 71  HTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEFTQ 117
                + D+ ++   L K G    + +  +        + R  +   +   +
Sbjct: 98  RVMFTVEDIDEMVSRLTKHGAE-LVGEVVQYENSYRLCYIRGVEGILIGLAE 148

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 36.0 bits (83), Expect = 8e-04
 Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 9/108 (8%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAI 76
             L L++           + A+L +G   I L+E  + +        + G    H  I +
Sbjct: 28  GSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGV 87

Query: 77  RDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDANALEFTQ 117
           + + +    + + G+            G    F   R       EF +
Sbjct: 88  KSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCE 135

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.87
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.84
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.83
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.81
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.81
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.8
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.8
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.8
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.79
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.79
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.78
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.77
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.77
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.76
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.76
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.76
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.76
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.76
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.76
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.75
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.75
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.75
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.75
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.75
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.75
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.74
3ghj_A	141	Putative integron gene cassette protein; integron	99.74
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.74
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.73
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.72
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.72
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.72
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.71
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.68
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.66
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.64
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.64
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.64
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.6
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.59
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.58
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.57
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.56
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.56
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.55
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.55
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.55
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.55
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.54
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.54
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.54
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.54
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.53
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.53
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.51
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.5
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.5
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.5
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.49
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.49
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.48
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.48
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.47
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.46
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.46
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.45
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.44
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.43
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.42
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.41
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.39
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.3
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.27
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.25
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.22
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.21
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.21
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.16
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.08
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.07
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.99
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.99
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.94
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.9
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.66
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.65
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.65
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.54
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.97
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.05
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	96.08
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	96.08
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	95.74
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	95.73
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	95.69
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	95.53
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	95.53
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	95.42
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	95.37
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	94.9
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	94.85
3ghj_A	141	Putative integron gene cassette protein; integron	94.58
2p25_A	126	Glyoxalase family protein; structural genomics, MC	94.53
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	94.1
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	93.94
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	93.85
3huh_A	152	Virulence protein STM3117; structural genomics, ny	93.48
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	93.27
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	93.17
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	93.1
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	92.93
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	92.73
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	92.36
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	92.32
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	92.19
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	92.04
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	92.0
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	91.75
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	91.73
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	91.7
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	90.92
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	90.01
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	89.72
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	89.01
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	88.72
3drn_A	161	Peroxiredoxin, bacterioferritin comigratory prote	88.45
1nki_A	135	Probable fosfomycin resistance protein; potassium	88.19
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	87.89
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	87.86
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	87.41
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	86.7
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	86.15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	86.01
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	84.95
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	84.3
3gkn_A	163	Bacterioferritin comigratory protein; BCP, PRX, at	83.64
3ixr_A	179	Bacterioferritin comigratory protein; alpha beta p	83.24
3p7x_A	166	Probable thiol peroxidase; thioredoxin fold, oxido	80.21

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.87  E-value=6.3e-21  Score=117.94  Aligned_cols=113  Identities=20%  Similarity=0.170  Sum_probs=82.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEec-------CCCCCCCCCCCCCCCcceEEEEEC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL-------PNPDPLSGRPEHGGRDRHTCIAIR   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~-------~~~~~~~~~~~~~~~~~hi~f~v~   77 (120)
                      ..-+|.+.+++||.++|||++....+........+++..++..++|+..       +........+....+..|+||.|+
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~   90 (134)
T 3l7t_A           11 LIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVE   90 (134)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCSEEEEEEEECS
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCCCeEEEEEEEC
Confidence            3457888999999999999996322111122234678888889999882       222111111212345689999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           78 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      |+++++++|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        91 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           91 DVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            9999999999999998652    467789999999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.84  E-value=4.6e-20  Score=113.19  Aligned_cols=112  Identities=18%  Similarity=0.213  Sum_probs=80.0

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      ..-.|.+.+.+||.++|||++.............+++..++..++|++.+.+......+. ..+..|++|.|+|++++++
T Consensus        11 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~g~~~~~~~v~d~~~~~~   89 (126)
T 2p25_A           11 INASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPE-ALGLRHLAFKVEHIEEVIA   89 (126)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSSC-CSSCCCEEEECSCHHHHHH
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCCC-CccceEEEEEeCCHHHHHH
Confidence            345788899999999999998532111001122356788887888987543221111111 2345799999999999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        90 ~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           90 FLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             HHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             HHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            999999998652    367789999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.83  E-value=3.1e-20  Score=115.54  Aligned_cols=113  Identities=15%  Similarity=0.166  Sum_probs=82.2

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC-CCCCCceeEEEEeCCeEEEEEecCCCCCCCCC-CCCCCCcceEEEEECCHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP-HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~-~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~-~~~~~~~~hi~f~v~d~d~~   82 (120)
                      ..-+|.+.+++||. +|||++..... ....+...+|+..++..|+|++.......... .....+.+|+||.|+|++++
T Consensus        13 i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~di~~~   91 (133)
T 3hdp_A           13 YAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVEDIQKS   91 (133)
T ss_dssp             EECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEEESCHHHH
T ss_pred             EEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEEEcCCHHHH
Confidence            34578899999999 99999953211 11134456778888889999885432211000 01134568999999999999


Q ss_pred             HHHHHHCCCeEEec------CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...      .+|.+.+||+|||||+|||+|.
T Consensus        92 ~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           92 IEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             HHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             HHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            99999999998652      3677899999999999999973

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.83  E-value=1.4e-19  Score=111.83  Aligned_cols=103  Identities=21%  Similarity=0.318  Sum_probs=79.4

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILD   87 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l~   87 (120)
                      +|.+.+++||.++|||++. .++........+|+..++..++|...+...     +   .+..|++|.|+|+++++++|+
T Consensus        21 ~D~~~a~~FY~~~lG~~~~-~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~---~~~~~~~f~v~d~~~~~~~l~   91 (126)
T 2qqz_A           21 GCEEEARAFYGETIGMEEI-PKPEELKKRGGCWFKCGNQEIHIGVEQNFN-----P---AKRAHPAFYVLKIDEFKQELI   91 (126)
T ss_dssp             TTHHHHHHHHTTTTCCEEE-CCCGGGGGGCCEEEEETTEEEEEEECTTCC-----C---CSSSCEEEEETTHHHHHHHHH
T ss_pred             ccHHHHHHHHHhcCCCEEe-cCcccccCCCceEEEeCCEEEEEEecCCCC-----C---CCceEEEEEcCCHHHHHHHHH
Confidence            6888899999999999995 332200012347888888888887642111     1   235799999999999999999


Q ss_pred             HCCCeEEec--CCCccEEEEeCCCCCeEEEEeeC
Q 033399           88 KAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        88 ~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++|+++...  .+|.+.+||+|||||.|||.++.
T Consensus        92 ~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           92 KQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             HTTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             HcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            999998764  35678999999999999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=7.9e-20  Score=112.95  Aligned_cols=114  Identities=22%  Similarity=0.287  Sum_probs=81.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCcceEEEEECCHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~---~~~~~~~~hi~f~v~d~d~   81 (120)
                      ..-+|.+.+++||.++|||++....+....+...+|+..++..++|++..........   ....++..|++|.|+|+++
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d~~~   90 (134)
T 3rmu_A           11 IAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIEVDNINA   90 (134)
T ss_dssp             EECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEEEEESCHHH
T ss_pred             EEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEEEEcCCHHH
Confidence            3457888999999999999995221111123456788888888999875432211000   0112356899999999999


Q ss_pred             HHHHHHHCCCeEEec-----CCCccEEEE--eCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~-----~~g~~~~~~--~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...     .+|.+.+|+  +|||||.|||+|.
T Consensus        91 ~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           91 AVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             HHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             HHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999998542     346667777  8999999999873

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=3.6e-19  Score=109.53  Aligned_cols=109  Identities=17%  Similarity=0.166  Sum_probs=79.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~   81 (120)
                      .-+|.+.+++||.++|||++.........+...+|+..+ +..|+|++.+...+.. . ....+..|++|.|+|   +++
T Consensus        10 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~-~-~~~~g~~hi~~~v~d~~~v~~   87 (127)
T 3e5d_A           10 WTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT-T-GENLGWAHIAISTGTKEAVDE   87 (127)
T ss_dssp             ECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC-C-SSCSSCCCEEEECSSHHHHHH
T ss_pred             EECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC-C-cCCCceEEEEEEcCCHHHHHH
Confidence            457888999999999999995321110123455677774 4588888765332211 1 122346899999999   889


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEE
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++|+++|+++...    .+|.+.+||+|||||.|||+
T Consensus        88 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           88 LTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             HHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            999999999998662    46678999999999999996

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.81  E-value=4.8e-19  Score=109.65  Aligned_cols=108  Identities=16%  Similarity=0.167  Sum_probs=80.2

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-HHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-VSKLK   83 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d-~d~~~   83 (120)
                      ..-.|.+.+++||.++|||++.. +.     ...+++..++..++|........... .....+..|++|.|+| +++++
T Consensus        16 l~v~D~~~a~~FY~~~lG~~~~~-~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~v~dd~~~~~   88 (133)
T 3ey7_A           16 LTVADIPTTTNFYEKVLGMKAVS-FG-----AGRIALEFGHQKINLHQLGNEFEPKA-QNVRVGSADLCFITDTVLSDAM   88 (133)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEE-ET-----TTEEEEEETTEEEEEEETTSCCSSCC-TTCCTTCCEEEEECSSCHHHHH
T ss_pred             EEECCHHHHHHHHHHccCceEEE-ec-----CCeEEEEcCCEEEEEEcCCCCccccC-CCCCCCccEEEEEeCcHHHHHH
Confidence            34578899999999999999963 22     13467888888888887543321111 1112345899999997 99999


Q ss_pred             HHHHHCCCeEEec----CC---CccEEEEeCCCCCeEEEEeeC
Q 033399           84 MILDKAGISYTLS----KS---GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~---g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++|+++|+++...    .+   +.+.+||+|||||.|||++++
T Consensus        89 ~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           89 KHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             HHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             HHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            9999999998652    11   238999999999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.81  E-value=2.1e-18  Score=109.34  Aligned_cols=114  Identities=14%  Similarity=0.148  Sum_probs=80.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCC------CCceeEEEEeCC-eEEEEEecCCCCCCCCCC-CCCCCcceEEEEEC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGRP-EHGGRDRHTCIAIR   77 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~------~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~-~~~~~~~hi~f~v~   77 (120)
                      .-.|.+.+++||.++|||++........      .....+|+..++ ..++|++.+...+....+ ....+..|+||.|+
T Consensus        26 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~h~~~~v~  105 (156)
T 3kol_A           26 NVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDID  105 (156)
T ss_dssp             EESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTCCCSSCCEEEEECC
T ss_pred             EeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCCCCCceEEEEEEec
Confidence            4568889999999999999953111000      012347788865 688998865432211111 12235689999999


Q ss_pred             --CHHHHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEeeC
Q 033399           78 --DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        78 --d~d~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                        |+++++++|+++|+++...   ....+.+||+|||||.|||++.+
T Consensus       106 ~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A          106 PQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             GGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence              9999999999999998652   22335999999999999999864

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.81  E-value=6.8e-20  Score=117.46  Aligned_cols=107  Identities=16%  Similarity=0.177  Sum_probs=69.6

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe--C-C-e-EEEEEecCCCCCCCC--CCCCCCCcceEEEEECCHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV--G-A-E-MIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~--g-~-~-~i~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~d~d   80 (120)
                      +|-+.+++||+++|||++....+.  .+  ..|+.+  . + . .+.+...........  .....++..|++|.|+|++
T Consensus        35 ~Dle~A~~FY~dvLGf~v~~d~~~--~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~f~VdDvd  110 (155)
T 4g6x_A           35 DDQAKAESFYTGKLGFLVKADVPV--GA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASFAVDDIA  110 (155)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEEEEE--TT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred             CCHHHHHHHHHHHhCCEEEEeecC--CC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEEeeechhh
Confidence            688889999999999998533332  11  233322  2 2 2 222222221110000  0001124579999999999


Q ss_pred             HHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++..+   ..+.+.+||+|||||+|||.|.
T Consensus       111 a~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          111 AEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             HHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC
T ss_pred             hhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEE
Confidence            9999999999998653   2334789999999999999995

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.80  E-value=3.9e-19  Score=113.99  Aligned_cols=115  Identities=14%  Similarity=0.118  Sum_probs=83.7

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCC--------------CCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGR   68 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~--~~~~~~   68 (120)
                      ..-+|.+.+++||.++|||++.......              ......+++..|+..|+|++..........  .....+
T Consensus        25 i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~~~~~l~~~~~g  104 (159)
T 3gm5_A           25 IVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTWREFLDKNGEG  104 (159)
T ss_dssp             EECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCHHHHHHHHHCSE
T ss_pred             EEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCChhHHHhhcCCce
Confidence            4557889999999999999984211100              123455778888889999886432110000  001235


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEec--CCCccEEEEeCCC--CCeEEEEeeC
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  119 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPd--Gn~iEl~~~~  119 (120)
                      .+|+||.|+|+++++++|+++|+++...  ..+.+.+||+|||  |++|||+|.+
T Consensus       105 ~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A          105 IHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             EEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            7899999999999999999999999663  3578999999999  9999999863

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.80  E-value=2e-18  Score=108.05  Aligned_cols=110  Identities=18%  Similarity=0.172  Sum_probs=78.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcc-eEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~-hi~f~v~d~d~~~~   84 (120)
                      .-+|.+.+++||.++|||++....+.. .....+.+..++..+.|.......+.  .+. .+... |++|.|+|++++++
T Consensus         9 ~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~--~~~-~~~~~~~~~~~v~dv~~~~~   84 (137)
T 3itw_A            9 AYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV--SCA-GGHTCKQVIVWVSDVDEHFM   84 (137)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC--EEC-CCCCCCEEEEEESCHHHHHH
T ss_pred             EECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc--cCC-CCCcEEEEEEEeCCHHHHHH
Confidence            346888999999999999996332221 12224556667778888663221111  111 12234 99999999999999


Q ss_pred             HHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           85 ILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +|+++|+++...    ++|.+.++|+|||||.|||.+..
T Consensus        85 ~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           85 RSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            999999998652    46779999999999999999853

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.80  E-value=2.6e-18  Score=106.69  Aligned_cols=110  Identities=17%  Similarity=0.221  Sum_probs=78.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      .-.|.+.+++||.++|||++....+.....+..+++..++    ..++|.......+   .+ ...+..|++|.|+|+++
T Consensus         9 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~-~~~~~~~~~~~v~d~~~   84 (135)
T 1f9z_A            9 RVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK---YE-LGTAYGHIALSVDNAAE   84 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC---CC-CCSSEEEEEEECSCHHH
T ss_pred             EeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc---cc-CCCCccEEEEEeCCHHH
Confidence            4578889999999999999963221111233456777764    5688875432211   11 12245799999999999


Q ss_pred             HHHHHHHCCCeEEec----CCCc-cEEEEeCCCCCeEEEEeeC
Q 033399           82 LKMILDKAGISYTLS----KSGR-PAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~-~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++|+++|+++...    .+|. +.+||+|||||.|||.+..
T Consensus        85 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           85 ACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             HHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             HHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            999999999998752    3554 6789999999999999853

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.79  E-value=1.9e-18  Score=108.12  Aligned_cols=104  Identities=21%  Similarity=0.208  Sum_probs=75.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-+|.+.+++||.++|||++....+      ..+++..++..|+|........   .+... ...|++|.|+|+++++++
T Consensus        14 ~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~~~-~~~~l~~~v~dv~~~~~~   83 (134)
T 3fcd_A           14 HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPDGI-ARVAICIDVSDIDSLHTK   83 (134)
T ss_dssp             EESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSCHHHHHHH
T ss_pred             EECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCCCC-ceEEEEEEeCCHHHHHHH
Confidence            4568889999999999999963322      2467888888899887543211   11111 236999999999999999


Q ss_pred             HHHCCCe----EEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGIS----YTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~----~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++|+.    +..    .++|.+.++|+|||||.|||.+..
T Consensus        84 l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           84 LSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            9976653    322    357778999999999999999853

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.79  E-value=1.8e-18  Score=109.15  Aligned_cols=108  Identities=16%  Similarity=0.162  Sum_probs=78.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      .-+|.+.+++||.++|||++.............+|+..++    ..|+|++......   .+. ..+..|++|.|+|+++
T Consensus        15 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~---~~~-~~~~~h~~f~v~d~~~   90 (144)
T 2c21_A           15 RVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS---YKH-DEAYGHIAIGVEDVKE   90 (144)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC---CCC-CSSEEEEEEEESCHHH
T ss_pred             EeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC---CCC-CCCceEEEEEeCCHHH
Confidence            4578888999999999999953211100123446787764    5788877543211   111 2345899999999999


Q ss_pred             HHHHHHHCCCeEEecCCCccEE-EEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~~~g~~~~-~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++... +|.+.+ ||+|||||.|||.+.
T Consensus        91 ~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           91 LVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             HHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEH
T ss_pred             HHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEc
Confidence            999999999998777 666555 999999999999874

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.79  E-value=3.3e-19  Score=111.56  Aligned_cols=112  Identities=21%  Similarity=0.110  Sum_probs=78.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CCHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RDVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d~d~~   82 (120)
                      .-+|.+.+++||.++|||++....+.....+..+++. ++..|+|++......... .....+..|++|.|   +|++++
T Consensus        12 ~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~-~~~~~g~~h~~f~v~~~~d~~~~   89 (136)
T 2rk0_A           12 TVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLF-DETRPGLDHLSFSVESMTDLDVL   89 (136)
T ss_dssp             ECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCC-CTTSSEEEEEEEEESSHHHHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCC-CCCCCCcceEEEEeCCHHHHHHH
Confidence            4578889999999999999953222110112233444 667888887543211111 11123457999999   899999


Q ss_pred             HHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           83 KMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++|+++|+++...   ++| +.+||+|||||+|||.+..+
T Consensus        90 ~~~l~~~G~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           90 EERLAKAGAAFTPTQELPFG-WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             HHHHHHHTCCBCCCEEETTE-EEEEEECTTCCEEEEEEECT
T ss_pred             HHHHHHCCCcccCccccCCc-eEEEEECCCCCEEEEEEcCC
Confidence            99999999997642   355 88999999999999998754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.79  E-value=1.1e-19  Score=117.09  Aligned_cols=115  Identities=15%  Similarity=0.160  Sum_probs=82.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCcceEEEEECCHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~--~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      .-+|.+.+++||.++|||++.........+...+++..++..|+|++..........  .....+..|+||.|+|+++++
T Consensus        15 ~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hiaf~V~Did~~~   94 (161)
T 3oa4_A           15 AVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGVKSIEERI   94 (161)
T ss_dssp             ECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEEEECSCHHHHH
T ss_pred             EECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEEEEECCHHHHH
Confidence            456888999999999999995321111123456788888889999875433210000  011235789999999999999


Q ss_pred             HHHHHCCCeEEec-----CCCccEEEE--eCCCCCeEEEEeeCC
Q 033399           84 MILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVDG  120 (120)
Q Consensus        84 ~~l~~~Gv~~~~~-----~~g~~~~~~--~DPdGn~iEl~~~~~  120 (120)
                      ++|+++|+++...     .+|.+.+|+  +|||||+|||++..+
T Consensus        95 ~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           95 QEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             HHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             HHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            9999999998653     245677777  499999999999753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=6.5e-18  Score=107.42  Aligned_cols=106  Identities=20%  Similarity=0.214  Sum_probs=78.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-CHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-DVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-d~d~~~~   84 (120)
                      .-+|.+.+++||.++|||++. .+.+     ..+++..++..++|........... .....+..|++|.++ |++++++
T Consensus        30 ~v~D~~~a~~FY~~vLG~~~~-~~~~-----~~~~l~~~~~~l~l~~~~~~~~~~~-~~~~~g~~hi~f~~~~dl~~~~~  102 (152)
T 3huh_A           30 TVSDISTTIRFYEEVLGFSAV-TFKQ-----NRKALIFGAQKINLHQQEMEFEPKA-SRPTPGSADLCFITSTPINDVVS  102 (152)
T ss_dssp             EESCHHHHHHHHHHTTCCEEE-EETT-----TEEEEEETTEEEEEEETTBCCSSCC-SSCCTTCCEEEEEESSCHHHHHH
T ss_pred             EeCCHHHHHHHHHhcCCCEEE-EccC-----CeEEEEeCCeEEEEeccCCcCCCcC-cCCCCCccEEEEEecCCHHHHHH
Confidence            356888999999999999996 3322     3467888888888887543211111 111234589999997 9999999


Q ss_pred             HHHHCCCeEEec----CC--C-ccEEEEeCCCCCeEEEEee
Q 033399           85 ILDKAGISYTLS----KS--G-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        85 ~l~~~Gv~~~~~----~~--g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|+++|+++...    .+  | .+.+||+|||||+|||++.
T Consensus       103 ~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~  143 (152)
T 3huh_A          103 EILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQY  143 (152)
T ss_dssp             HHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEec
Confidence            999999997542    22  2 4889999999999999985

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.77  E-value=4.9e-18  Score=111.42  Aligned_cols=114  Identities=14%  Similarity=0.146  Sum_probs=78.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-------------------eEEEEEecCCCC--CCCC---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNPD--PLSG---   61 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-------------------~~i~l~~~~~~~--~~~~---   61 (120)
                      .-+|.+.+++||.++|||++..........+...++..++                   ..++|+......  +...   
T Consensus        41 ~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~  120 (187)
T 3vw9_A           41 RVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHN  120 (187)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGGCTTCCCCC
T ss_pred             EeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCCCCcccccc
Confidence            4578888999999999999963222111234445555543                   478886533211  1000   


Q ss_pred             CCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeC
Q 033399           62 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        62 ~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ......+..|++|.|+|+++++++|+++|+++...+   ...+.+||+|||||+|||++..
T Consensus       121 g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          121 GNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             SSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            001123568999999999999999999999998742   2245689999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.77  E-value=3.9e-18  Score=107.93  Aligned_cols=115  Identities=11%  Similarity=0.091  Sum_probs=80.1

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC-C----------CCCCceeEEEEeCC--eEEEEEecCCCCCC--C-CCCCCCCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP-H----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL--S-GRPEHGGR   68 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~-~----------~~~~~~~~~l~~g~--~~i~l~~~~~~~~~--~-~~~~~~~~   68 (120)
                      ..-+|.+.+++||.+ |||++..... .          .......+++..++  ..|+|++...+...  . ..+....+
T Consensus        17 l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~g   95 (153)
T 1ss4_A           17 IVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPVNALG   95 (153)
T ss_dssp             EECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCCSSSBE
T ss_pred             EEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCCCCCCCc
Confidence            345788899999999 9999952211 0          00123446677754  58888774222111  0 01111234


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      .+|++|.|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||++..+
T Consensus        96 ~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           96 YLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEECC
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEeccC
Confidence            5799999999999999999999998653    367789999999999999998753

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.76  E-value=1.2e-17  Score=103.92  Aligned_cols=104  Identities=15%  Similarity=0.138  Sum_probs=71.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEE-eCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      .-+|.+.+++||.+ |||++......  . ...+++. .++..+.|.......     .. .+...|++|.|+|++++++
T Consensus        13 ~v~D~~~a~~FY~~-LG~~~~~~~~~--~-~~~~~~~~~~~~~l~l~~~~~~~-----~~-~~~~~~l~f~v~dvd~~~~   82 (128)
T 3g12_A           13 NTSHLQGMLGFYRI-IGFQFTASKVD--K-GSEVHRAVHNGVEFSLYSIQNPQ-----RS-QIPSLQLGFQITDLEKTVQ   82 (128)
T ss_dssp             EESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS-----SC-CCCSEEEEEEESCHHHHHH
T ss_pred             EcCCHHHHHHHHHH-CCCEEecccCC--C-CCEEEEEeCCCeEEEEEECCCCc-----CC-CCCceEEEEEeCCHHHHHH
Confidence            35788899999999 99999532121  1 1234565 567777775543211     11 1233689999999999999


Q ss_pred             HHHHCCCe-EEe----cCCCccEEEEeCCCCCeEEEEeeCC
Q 033399           85 ILDKAGIS-YTL----SKSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        85 ~l~~~Gv~-~~~----~~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +|+++|++ +..    .++|.+ ++|+|||||+|||.+..+
T Consensus        83 ~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           83 ELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             HHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC---
T ss_pred             HHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEecc
Confidence            99999999 653    346777 999999999999998753

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.76  E-value=1.5e-17  Score=102.72  Aligned_cols=98  Identities=11%  Similarity=0.066  Sum_probs=75.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-.|.+.+++||.++|||++.. +..     ..+++..++..++|...+..      +.  +...|++|.|+|+++++++
T Consensus        12 ~v~D~~~a~~FY~~~lG~~~~~-~~~-----~~~~~~~~~~~l~l~~~~~~------~~--~~~~~~~~~v~dv~~~~~~   77 (124)
T 1xrk_A           12 TARDVAEAVEFWTDRLGFSRVF-VED-----DFAGVVRDDVTLFISAVQDQ------VV--PDNTQAWVWVRGLDELYAE   77 (124)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-ECS-----SEEEEEETTEEEEEEECSCT------TT--GGGCEEEEEEECHHHHHHH
T ss_pred             EcCCHHHHHHHHHHccCceEEe-cCC-----CEEEEEECCEEEEEEcCCCC------CC--CCceEEEEEECCHHHHHHH
Confidence            4478889999999999999963 221     23557778888888764321      11  2236999999999999999


Q ss_pred             HHHC------CC--eEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           86 LDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        86 l~~~------Gv--~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      |+++      |+  ++...    ++| +.+||+|||||.|||.+.
T Consensus        78 l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           78 WSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             HTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC
T ss_pred             HHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEe
Confidence            9999      99  76542    466 899999999999999885

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.76  E-value=2.5e-17  Score=103.57  Aligned_cols=104  Identities=22%  Similarity=0.269  Sum_probs=79.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~~   83 (120)
                      .-.|.+.+++||.++|||++.. +..     ..+|+..++..++|.......+   .+....+..|++|.|+  |+++++
T Consensus        11 ~v~D~~~a~~FY~~~LG~~~~~-~~~-----~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~~~v~~~d~~~~~   81 (141)
T 1npb_A           11 AVSDLQKSVTFWHELLGLTLHA-RWN-----TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAEEDFEPLS   81 (141)
T ss_dssp             EESCHHHHHHHHHTTSCCEEEE-EET-----TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEECCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHhccCCEEEe-ecC-----CcEEEEECCEEEEEEECCCCCC---CCCCCCCceEEEEEeCHHHHHHHH
Confidence            4578889999999999999953 211     2467888888888876542211   1111234589999996  999999


Q ss_pred             HHHHHCCCeEEecC-CCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...+ .+.+.+||+|||||.|||.+.
T Consensus        82 ~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~  117 (141)
T 1npb_A           82 QRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (141)
T ss_dssp             HHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEEC
Confidence            99999999987743 456899999999999999985

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.76  E-value=3.2e-17  Score=102.39  Aligned_cols=101  Identities=20%  Similarity=0.227  Sum_probs=78.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~~   83 (120)
                      .-.|.+.+++||.++|||++....+      ..+|+..++..++|...+..      +....+..|++|.|+  |+++++
T Consensus        11 ~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~v~~~d~~~~~   78 (135)
T 1nki_A           11 AVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFGIAAADFARFA   78 (135)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEEECHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEEccHHHHHHHH
Confidence            4568889999999999999953211      24678888888888764321      111234589999997  999999


Q ss_pred             HHHHHCCCeEEecC-CCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...+ .+.+.+||+|||||.|||.+.
T Consensus        79 ~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           79 AQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             HHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             HHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEEC
Confidence            99999999997743 356899999999999999875

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.76  E-value=4.1e-17  Score=100.88  Aligned_cols=100  Identities=20%  Similarity=0.207  Sum_probs=76.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-+|.+.+++||.+ |||++.. +..     ..+++..++..++|...+...     +.  .+..|++|.|+|+++++++
T Consensus        10 ~v~D~~~a~~FY~~-LG~~~~~-~~~-----~~~~~~~~~~~l~l~~~~~~~-----~~--~~~~~~~~~v~dv~~~~~~   75 (126)
T 1ecs_A           10 PSRDFDSTAAFYER-LGFGIVF-RDA-----GWMILQRGDLMLEFFAHPGLD-----PL--ASWFSCCLRLDDLAEFYRQ   75 (126)
T ss_dssp             EESCHHHHHHHHHT-TTCEEEE-ECS-----SEEEEEETTEEEEEEECTTCC-----GG--GCCCEEEEEESCHHHHHHH
T ss_pred             EeCCHHHHHHHHHH-CCCEEEe-cCC-----CEEEEEeCCEEEEEEeCCCCC-----CC--CcceEEEEEECCHHHHHHH
Confidence            45788899999998 9999963 211     235577788888887643211     11  2357999999999999999


Q ss_pred             HHHCCCeE-------Ee----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGISY-------TL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~~-------~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++|+++       ..    .++|.+.+||+|||||.|||.+..
T Consensus        76 l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           76 CKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999984       33    246778999999999999999853

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.76  E-value=8.5e-18  Score=103.96  Aligned_cols=106  Identities=18%  Similarity=0.152  Sum_probs=75.5

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe--CC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV--GA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~--g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      ..-+|.+.+++||.++|||++....+.   .....|+.+  ++  ..++|........    +...++..|++|.|+|++
T Consensus        19 l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~~~v~d~~   91 (133)
T 4hc5_A           19 IIVSDQEKALDFYVNTLGFEKVFDNQL---DPNMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYTGISLITRDID   91 (133)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEE---ETTEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEEEEEEEESCHH
T ss_pred             EEECCHHHHHHHHHhCcCCcEeeeccc---CCCceEEEEECCCCceEEEEecCccccc----ccCCCCeEEEEEEeCCHH
Confidence            345788899999999999999632211   011244433  32  4677766432111    111234689999999999


Q ss_pred             HHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++++|+++|+++..    .++|.+.+||+|||||.|||+|
T Consensus        92 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           92 EAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             HHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             HHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            999999999999874    2467799999999999999987

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.76  E-value=1.6e-17  Score=105.41  Aligned_cols=105  Identities=19%  Similarity=0.268  Sum_probs=76.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCC-CCCCCCCCCCCcceEEEEEC-CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-PLSGRPEHGGRDRHTCIAIR-DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~-~~~~~~~~~~~~~hi~f~v~-d~d~~~   83 (120)
                      .-+|.+.+++||.++|||++.. ..+     ...++.+++..+.|....... +....+.  .+..|++|.+. |+++++
T Consensus        34 ~v~Dl~~a~~FY~~vLG~~~~~-~~~-----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~dl~~~~  105 (147)
T 3zw5_A           34 TVKSIKDTTMFYSKILGMEVMT-FKE-----DRKALCFGDQKFNLHEVGKEFEPKAAHPV--PGSLDICLITEVPLEEMI  105 (147)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEE-ETT-----TEEEEEETTEEEEEEETTSCCSSCCSSCC--TTCCEEEEECSSCHHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEe-cCC-----CceEEEECCcEEEEEEcCCCcCcccCCCC--CCCceEEEEeccCHHHHH
Confidence            4578889999999999999962 221     235688888888887643321 1111111  23479999886 999999


Q ss_pred             HHHHHCCCeEEec----C--CC-ccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLS----K--SG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~--~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++...    .  .| .+.+||+|||||.|||.++
T Consensus       106 ~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A          106 QHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             HHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9999999998642    1  12 3689999999999999874

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.76  E-value=2.1e-17  Score=102.94  Aligned_cols=102  Identities=16%  Similarity=0.040  Sum_probs=75.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~   81 (120)
                      .-+|-+.+++||.++|||++....+      ..+++..+ +..+.|.....+.     +...++..|++|.|+|   +++
T Consensus        20 ~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~v~~~~dv~~   88 (132)
T 3sk2_A           20 YVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEIGIMLPTGEDVDK   88 (132)
T ss_dssp             ECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEEEEEESSHHHHHH
T ss_pred             EECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceEEEEeCCHHHHHH
Confidence            4578888999999999999953221      23445544 4678887654211     1112345799999986   999


Q ss_pred             HHHHHHH---CCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           82 LKMILDK---AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        82 ~~~~l~~---~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++|++   +|+++...    .+| +.+||+|||||.|||++++
T Consensus        89 ~~~~l~~~~~~G~~~~~~p~~~~~g-~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           89 LFNEWTKQKSHQIIVIKEPYTDVFG-RTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             HHHHHHHCSSSCCEEEEEEEEETTE-EEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHhhhcCCCEEeeCCcccCce-EEEEEECCCCCEEEEEeCC
Confidence            9999999   99998752    466 8999999999999999863

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.76  E-value=1.4e-17  Score=101.65  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=75.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-+|.+.+++||.++|||++.... .     ..+++..++..+.+.... ..+.   .....+ .|++|.|+|+++++++
T Consensus        12 ~v~D~~~a~~FY~~~lG~~~~~~~-~-----~~~~~~~~~~~l~l~~~~-~~~~---~~~~~~-~~~~~~v~d~~~~~~~   80 (118)
T 2i7r_A           12 IVSNVPQVCADLEHILDKKADYAN-D-----GFAQFTIGSHCLMLSQNH-LVPL---ENFQSG-IIIHIEVEDVDQNYKR   80 (118)
T ss_dssp             ECSCHHHHHHHHHHHHTSCCSEEE-T-----TEEEEEETTEEEEEESSC-SSSC---CCCCSC-EEEEEECSCHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHhCCeeEEeC-C-----CEEEEEeCCeEEEEEcCC-CCCc---ccCCCe-EEEEEEECCHHHHHHH
Confidence            457888999999999999995221 1     145677787776553221 1111   111122 5899999999999999


Q ss_pred             HHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++|+++..    .++|.+.+||+|||||.|||.+.+
T Consensus        81 l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           81 LNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             HHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             HHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999854    246778999999999999999853

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.75  E-value=2.8e-18  Score=110.50  Aligned_cols=110  Identities=17%  Similarity=0.255  Sum_probs=79.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCC-CCC--CCCC-CCCCCcceEEEEE---C
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP-DPL--SGRP-EHGGRDRHTCIAI---R   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~-~~~--~~~~-~~~~~~~hi~f~v---~   77 (120)
                      ..-+|.+.+++||.++|||++....+     ...+|+..++..+.++..... .+.  ...+ ....+..|++|.|   +
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~f~V~~~~   88 (160)
T 3r4q_A           14 LYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFCFYADDKA   88 (160)
T ss_dssp             EECSCHHHHHHHHHHHSCCEEEEEET-----TTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEEEEESSHH
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEecC-----CcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEEEEeCCHH
Confidence            34578889999999999999963222     134677778877777753221 100  0111 1112358999999   8


Q ss_pred             CHHHHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEeeC
Q 033399           78 DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++++++|+++|+++...   ..+.+.+||+|||||.|||++.+
T Consensus        89 dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           89 EVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             HHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             HHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            9999999999999998652   35789999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.75  E-value=1.2e-17  Score=102.85  Aligned_cols=98  Identities=18%  Similarity=0.171  Sum_probs=75.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-.|.+.+++||.++|||++.. +..     ..+++..++..++|...+..      +.  +...|++|.|+|+++++++
T Consensus        12 ~v~D~~~a~~FY~~~LG~~~~~-~~~-----~~~~~~~~~~~l~l~~~~~~------~~--~~~~~~~~~v~dvd~~~~~   77 (122)
T 1qto_A           12 TAVDVPANVSFWVDTLGFEKDF-GDR-----DFAGVRRGDIRLHISRTEHQ------IV--ADNTSAWIEVTDPDALHEE   77 (122)
T ss_dssp             EESSHHHHHHHHHHTTCCEEEE-ECS-----SEEEEEETTEEEEEEECSCH------HH--HTTCEEEEEESCHHHHHHH
T ss_pred             EcCCHHHHHHHHHhccCcEEee-CCC-----CEEEEEECCEEEEEEcCCCC------CC--CCceEEEEEECCHHHHHHH
Confidence            4578889999999999999953 221     23567778888888764321      11  1236999999999999999


Q ss_pred             HHHC------CC--eEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           86 LDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        86 l~~~------Gv--~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      |+++      |+  ++...    ++| +.++|+|||||.|||.+.
T Consensus        78 l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           78 WARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999      99  77542    466 889999999999999985

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.75  E-value=4.8e-18  Score=108.09  Aligned_cols=108  Identities=13%  Similarity=-0.029  Sum_probs=79.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCC--CCCCCCCCCCCcceEEEEE---CCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAI---RDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~--~~~~~~~~~~~~~hi~f~v---~d~d   80 (120)
                      .-+|.+.+++||.++|||++.. +.     ...+++..++..|.|++.....  ....... ..+..|++|.|   +|++
T Consensus        12 ~v~D~~~a~~FY~~~LG~~~~~-~~-----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~-~~~~~~l~f~v~~~~dv~   84 (150)
T 3bqx_A           12 GIGDLEASARFYGEGFGWAPVF-RN-----PEIIFYQMNGFVLATWLVQNLQEDVGVAVTS-RPGSMALAHNVRAETEVA   84 (150)
T ss_dssp             EESCHHHHHHHHHHTSCCCCSE-EC-----SSEEEEECSSSEEEEEEHHHHHHHHSSCCCS-SCCSCEEEEECSSGGGHH
T ss_pred             EcCCHHHHHHHHHHhcCCEeec-CC-----CCEEEEEcCCEEEEEEeccccccccCCCCCC-CCCeEEEEEEeCCHHHHH
Confidence            4578899999999999999952 21     1346677777788888743210  0000011 22457999999   8999


Q ss_pred             HHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           81 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++++|+++|+++...    ++|.+.+||+|||||.|||.+.++
T Consensus        85 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           85 PLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             HHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTT
T ss_pred             HHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCC
Confidence            9999999999998652    356789999999999999998653

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.75  E-value=2.9e-17  Score=101.94  Aligned_cols=105  Identities=13%  Similarity=0.139  Sum_probs=76.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCc-eeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~   82 (120)
                      .-.|.+.+++||.++|||++....+...... ...++..++..++|.+.+..      +  ..+..|++|.|+  |++++
T Consensus        11 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~--~~~~~h~~~~v~~~d~~~~   82 (133)
T 2p7o_A           11 IVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------Q--ERTYNHIAFQIQSEEVDEY   82 (133)
T ss_dssp             EESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC------C--CCCSCEEEEECCGGGHHHH
T ss_pred             EcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC------C--CCCeeEEEEEcCHHHHHHH
Confidence            4568889999999999999953222211110 11367778778888764321      1  124589999994  99999


Q ss_pred             HHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...    .++.+.+||+|||||.|||.+.
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (133)
T 2p7o_A           83 TERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAG  122 (133)
T ss_dssp             HHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECS
T ss_pred             HHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcC
Confidence            99999999999764    2456899999999999999875

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=8.4e-18  Score=105.52  Aligned_cols=105  Identities=13%  Similarity=0.160  Sum_probs=76.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCc-eeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~   82 (120)
                      .-+|.+.+++||.++|||++....+...... ...|+..++..|+|++.+..      +  ..+..|++|.|+  |++++
T Consensus        11 ~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~~v~~~d~~~~   82 (139)
T 1r9c_A           11 IVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAFKIDDADFDRY   82 (139)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEEECCGGGHHHH
T ss_pred             EeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEEEcCHHHHHHH
Confidence            4568889999999999999963222110110 11277778888888764211      1  124589999999  99999


Q ss_pred             HHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...    +++.+.+||+|||||.|||.+.
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           83 AERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             HHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            99999999998653    2467899999999999999874

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.75  E-value=1.3e-17  Score=105.80  Aligned_cols=105  Identities=15%  Similarity=0.179  Sum_probs=77.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d~   81 (120)
                      .-.|.+.+++||.++|||++....+      ..+++.+++ ..|.|+......+.   +...++..|++|.|+   |+++
T Consensus        32 ~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f~v~d~~dv~~  102 (144)
T 2kjz_A           32 YVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAFRVENDAQVDE  102 (144)
T ss_dssp             EESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEEECSSHHHHHH
T ss_pred             EeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEEEeCCHHHHHH
Confidence            4568889999999999999952221      235677764 57888764332111   111234589999997   5899


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      ++++|+++|+++...    ++| +.+||+|||||.|||.+..|
T Consensus       103 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A          103 TFAGWKASGVAMLQQPAKMEFG-YTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             HHHHHHHTTCCCCSCCEEETTE-EEEEECCTTCCEEEEEEECC
T ss_pred             HHHHHHHCCCeEecCceecCCc-eEEEEECCCCCEEEEEecCC
Confidence            999999999998653    355 88999999999999999876

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.74  E-value=2.9e-17  Score=104.29  Aligned_cols=107  Identities=14%  Similarity=0.129  Sum_probs=76.4

Q ss_pred             eccchhhhhhhh---hhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CH
Q 033399            6 KRKKREINKHQR---FNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~   79 (120)
                      .-+|.+.+++||   .++|||++....+.     ...|+. ++..|+|++...............+..|++|.|+   |+
T Consensus        27 ~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f~v~~~~dv  100 (146)
T 3ct8_A           27 NVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKV  100 (146)
T ss_dssp             EESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCCEEEEECSCHHHH
T ss_pred             EeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCceEEEEECCCHHHH
Confidence            456888999999   99999999532221     124666 7778888875421000000111124589999999   89


Q ss_pred             HHHHHHHHHCCCeEEec-----C--CCccEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLS-----K--SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~-----~--~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++|+++|+++...     .  ++.+.+||+|||||.|||+++
T Consensus       101 ~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A          101 DELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             HHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            99999999999998762     1  246899999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.74  E-value=3.9e-17  Score=103.07  Aligned_cols=98  Identities=27%  Similarity=0.390  Sum_probs=75.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~   81 (120)
                      .-.|.+.+++||.++|||++....+    ....+++.+++  ..|+|.+.+.          ..+..|++|.|+  |+++
T Consensus        35 ~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~----------~~~~~h~~~~v~~~dld~  100 (141)
T 3ghj_A           35 KVKNLEKSSQFYTEILGFEAGLLDS----ARRWNFLWVSGRAGMVVLQEEKE----------NWQQQHFSFRVEKSEIEP  100 (141)
T ss_dssp             EESCHHHHHHHHHHTSCCEEEEEET----TTTEEEEEETTTTEEEEEEECCS----------SCCCCEEEEEECGGGHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEecC----CCcEEEEEecCCCcEEEEeccCC----------CCCCceEEEEEeHHHHHH
Confidence            4578889999999999999963322    12346777764  5777776421          123579999997  9999


Q ss_pred             HHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           82 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++++|+++|+++...    .++.+.+||+|||||.|||++
T Consensus       101 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A          101 LKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             HHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            999999999998742    245689999999999999986

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.74  E-value=3.3e-17  Score=99.89  Aligned_cols=98  Identities=12%  Similarity=0.109  Sum_probs=72.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      .-+|.+.+++||.++|||++.. .+    + ..+++..++   ..+.+...+.       .  .....|++|.|+|++++
T Consensus        14 ~v~d~~~a~~FY~~~lG~~~~~-~~----~-~~~~~~~~~~~~~~l~l~~~~~-------~--~~~~~~~~~~v~d~~~~   78 (119)
T 2pjs_A           14 ATPEPARAQAFYGDILGMPVAM-DH----G-WIVTHASPLEAHAQVSFAREGG-------S--GTDVPDLSIEVDNFDEV   78 (119)
T ss_dssp             ECSCGGGGHHHHTTTTCCCEEE-EC----S-SEEEEEEEEEEEEEEEEESSSB-------T--TBCCCSEEEEESCHHHH
T ss_pred             EcCCHHHHHHHHHHhcCCEEEe-cC----C-EEEEEecCCCCcEEEEEEcCCC-------C--CCceeEEEEEECCHHHH
Confidence            3578889999999999999953 22    1 223555543   2455543211       0  12347999999999999


Q ss_pred             HHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++..    .++|.+.+||+|||||.|||.+.
T Consensus        79 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           79 HARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            9999999998754    24677899999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.73  E-value=9e-18  Score=105.69  Aligned_cols=114  Identities=12%  Similarity=0.136  Sum_probs=79.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC------eEEEEEecCCCCCCCC-C-CCCC--CCcceEEEE
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG-R-PEHG--GRDRHTCIA   75 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~------~~i~l~~~~~~~~~~~-~-~~~~--~~~~hi~f~   75 (120)
                      .-.|.+.+++||.++|||++.........+...+++..++      ..|+|++......... . ....  .+..|++|.
T Consensus        16 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~h~~~~   95 (148)
T 1jc4_A           16 ACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWR   95 (148)
T ss_dssp             ECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCCceEEEEEE
Confidence            4578889999999999999953211111233457788876      6788887543211000 0 0111  345799999


Q ss_pred             ECCHHHHHHHHHHCCCeEEe-c----CCCccEEEE--eCCCCCeEEEEeeC
Q 033399           76 IRDVSKLKMILDKAGISYTL-S----KSGRPAIFT--RDPDANALEFTQVD  119 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv~~~~-~----~~g~~~~~~--~DPdGn~iEl~~~~  119 (120)
                      |+|+++++++|+++|+++.. .    .+|.+.+|+  +|||||.|||.+.+
T Consensus        96 v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           96 VDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            99999999999999999873 2    356677777  99999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.73  E-value=3.9e-17  Score=103.19  Aligned_cols=109  Identities=17%  Similarity=0.161  Sum_probs=75.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCC-----CCCCCCCCCCcceEEEEECCH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-----LSGRPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~-----~~~~~~~~~~~~hi~f~v~d~   79 (120)
                      ..-.|.+.+++||.++|||++....+.    ...+++..++..++|.+......     ....+. ..+ .+++|.|+|+
T Consensus        11 l~v~Dl~~s~~FY~~~LG~~~~~~~~~----~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~v~dv   84 (145)
T 2rk9_A           11 LYCFDINVSQSFFVDVLGFEVKYERPD----EEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPL-GSG-VNFQWDVIDI   84 (145)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEEEGG----GTEEEEEETTEEEEEEEC-----------CCSST-TTT-EEEEEECSCH
T ss_pred             EEECCHHHHHHHHHhccCCEEEeecCC----CCEEEEEcCCeEEEEEeccCCCcccccCccccCC-CCc-eEEEEEECCH
Confidence            345788899999999999999532222    12366777888888876421110     001111 123 3599999999


Q ss_pred             HHHHHHHHH-CCCeEEec-----------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           80 SKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        80 d~~~~~l~~-~Gv~~~~~-----------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++++|++ +|+++...           .++.+.++|+|||||.|||.+..
T Consensus        85 d~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           85 EPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             HHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999 99998642           23458899999999999999853

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.73  E-value=1.5e-17  Score=105.71  Aligned_cols=103  Identities=13%  Similarity=0.126  Sum_probs=71.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      .-+|.+.+++||.++|||++...........  .....++  ++++..+....     . ..+..|++|.|+|+++++++
T Consensus        13 ~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~--~~l~~~~~~~~-----~-~~~~~hl~f~V~d~d~~~~~   82 (144)
T 3r6a_A           13 YVADLNPALEFYEELLETPVAMRFEIPQTGV--ELAQIST--ILLIAGSEEAL-----K-PFRNTQATFLVDSLDKFKTF   82 (144)
T ss_dssp             EESCHHHHHHHHHHHTTCCCCEECCCSCSSC--EEEEETT--EEEEESCHHHH-----G-GGGGCCEEEEESCHHHHHHH
T ss_pred             EECCHHHHHHHHHHhcCCEEEEEeccCCccE--EEEEecc--EEEecCCcccC-----C-CCcceEEEEEeCCHHHHHHH
Confidence            4568889999999999999853211100111  2233344  55655321100     1 11347999999999999999


Q ss_pred             HHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++|+++...    ++| +.+||+|||||.|||++..
T Consensus        83 l~~~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           83 LEENGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             HHHTTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEEC
T ss_pred             HHHcCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcC
Confidence            99999998653    456 8899999999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=6.2e-17  Score=103.17  Aligned_cols=105  Identities=17%  Similarity=0.172  Sum_probs=76.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      ..-+|.+.+++||.++|||++....+      ..+++.. ++..+.|+..+...+.   +...++..|++|.|+|   ++
T Consensus        12 l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f~v~d~~dvd   82 (148)
T 3rhe_A           12 FYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSFQVNSNEMVD   82 (148)
T ss_dssp             EEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEEECSCHHHHH
T ss_pred             EEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEEEcCCHHHHH
Confidence            34578889999999999999953221      2456777 5668888765432211   1112234799999987   99


Q ss_pred             HHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|+++...    ++| +.+||+|||||.|||++..
T Consensus        83 ~~~~~l~~~G~~i~~~p~~~~~G-~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           83 EIHRQWSDKEISIIQPPTQMDFG-YTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             HHHHHHHHTTCCEEEEEEEETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             HHHHHHHhCCCEEEeCCeecCCC-cEEEEECCCCCEEEEEEcC
Confidence            9999999999998652    456 8899999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.72  E-value=3.7e-16  Score=97.21  Aligned_cols=103  Identities=18%  Similarity=0.129  Sum_probs=73.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d~~   82 (120)
                      .-+|.+.+++||.++|||++.. +..     ..+.+..++..+.|........    +. ..+..|++|.++   |++++
T Consensus        16 ~v~Dl~~a~~FY~~~LG~~~~~-~~~-----~~~~~~~~g~~~~l~~~~~~~~----~~-~~~~~h~~~~~~~~~d~~~~   84 (135)
T 3rri_A           16 PARDLDEAYDFYVTKLGCKLAR-RYP-----DRITLDFFGDQLVCHLSDRWDR----EV-SMYPRHFGITFRDKKHFDNL   84 (135)
T ss_dssp             EESCHHHHHHHHTTTTCCEEEE-EET-----TEEEEEETTEEEEEEECSCSCS----SC-CSSSCEEEEECSSHHHHHHH
T ss_pred             EcCCHHHHHHHHHHhcCCEeec-cCC-----CcEEEEEeCCEEEEEEcCcccc----cC-CCCCCeEEEEEcChHhHHHH
Confidence            4578889999999999999952 211     1234555565666654332211    11 123579999996   59999


Q ss_pred             HHHHHHCCCeEEec--------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           83 KMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~--------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+++|+++...        +++.+++||+|||||+|||.++.
T Consensus        85 ~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           85 YKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             HHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             HHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            99999999998542        23457899999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.72  E-value=4.2e-17  Score=102.18  Aligned_cols=107  Identities=19%  Similarity=0.155  Sum_probs=75.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CCeEEEEEecCCC---CCCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP---DPLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~i~l~~~~~~---~~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-+|.+.+++||.+ |||++....+.    ...+.+.. ++..+.|.+....   .+.. .+...++..|++|.|+   |
T Consensus        11 ~v~D~~~a~~FY~~-LG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~l~f~v~~~~d   84 (138)
T 2a4x_A           11 VVEDMAKSLEFYRK-LGVEIPAEADS----APHTEAVLDGGIRLAWDTVETVRSYDPEW-QAPTGGHRFAIAFEFPDTAS   84 (138)
T ss_dssp             EESCHHHHHHHHHT-TTCCCCGGGGG----CSEEEEECTTSCEEEEEEHHHHHHHCTTC-CCCBSSCSEEEEEECSSHHH
T ss_pred             EECCHHHHHHHHHH-cCCcEEecCCC----CceEEEEcCCCeEEEEecCccchhhCccc-CCCCCCCeEEEEEEeCCHHH
Confidence            45788899999998 99999532221    12344555 4567888763210   0100 0111234579999999   9


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...    ++|.+.+||+|||||.|||.+.
T Consensus        85 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  128 (138)
T 2a4x_A           85 VDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  128 (138)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeC
Confidence            999999999999998652    4677899999999999999885

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.72  E-value=9.7e-17  Score=105.13  Aligned_cols=114  Identities=16%  Similarity=0.158  Sum_probs=76.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-------------------CeEEEEEecCCC--CCCCC---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNP--DPLSG---   61 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-------------------~~~i~l~~~~~~--~~~~~---   61 (120)
                      .-.|.+.+++||.++|||++..........+...++..+                   +..|+|++....  .+...   
T Consensus        38 ~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~~~~~  117 (184)
T 2za0_A           38 RIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHN  117 (184)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCCC
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCCCccccccc
Confidence            456888899999999999995321110112233344432                   357888764321  11100   


Q ss_pred             CCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeC
Q 033399           62 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        62 ~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ......+..|++|.|+|+++++++|+++|+++...+   .+.+.+||+|||||+|||.+..
T Consensus       118 ~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          118 GNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             SSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            000113458999999999999999999999997742   2346799999999999998753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.72  E-value=5.9e-17  Score=101.62  Aligned_cols=110  Identities=11%  Similarity=0.057  Sum_probs=73.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCH---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV---   79 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~---   79 (120)
                      ..-+|.+.+++||.++|||++....+. ...+..+++..++.  .++|.......+.   +. ..+..|++|.|+|+   
T Consensus        17 l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~---~~-~~~~~hi~~~v~d~~~l   91 (139)
T 1twu_A           17 RPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGSTA---PV-PHPDSLLVFYVPNAVEL   91 (139)
T ss_dssp             EECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCCC---CC-CCTTCEEEEECCCHHHH
T ss_pred             eEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCCC---CC-CCCccEEEEEeCCcchH
Confidence            345788899999999999999532111 11234566666543  5666654322111   11 22457999999999   


Q ss_pred             HHHHHHHHHCCCeEEe--cC-CCccEEEEeCCCCCeEEEEeeC
Q 033399           80 SKLKMILDKAGISYTL--SK-SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~--~~-~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++++|+++|+++..  .+ .+....||+|||||.|||++..
T Consensus        92 ~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           92 AAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             HHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            9999999999999983  21 1111237999999999999853

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.71  E-value=2.4e-17  Score=105.06  Aligned_cols=106  Identities=12%  Similarity=0.041  Sum_probs=74.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCC---CCCCCCCCcceEEEEECCHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GRPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~---~~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      .-.|.+.+++||.++|||++.. .++    ...+++..++..++|+....+....   ..+.. .+ .|++|.|+|++++
T Consensus        32 ~v~Dl~~a~~FY~~vLG~~~~~-~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g-~~l~f~v~dld~~  104 (148)
T 2r6u_A           32 PFDDGDRARAFYRDAFGWAIAE-IPD----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV-TT-PVVTVDVESIESA  104 (148)
T ss_dssp             EESSHHHHHHHHHHHHCCEEEE-ETT----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSS-CS-CEEEEECSCHHHH
T ss_pred             EeCCHHHHHHHHHHccCcEEEE-CCC----CCEEEEEeCCcceeecccCCcccccceeecCCC-Ce-EEEEEEcCCHHHH
Confidence            4578889999999999999953 322    2346777776554443322111000   00111 23 4999999999999


Q ss_pred             HHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEeeC
Q 033399           83 KMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+++|+++...    + +| +.+||+|||||.|||.+..
T Consensus       105 ~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A          105 LERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             HHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            99999999998652    3 34 8899999999999999864

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.69  E-value=2.4e-16  Score=99.03  Aligned_cols=109  Identities=14%  Similarity=-0.015  Sum_probs=74.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCC---CCCCCCCCCCCCCcceEEEEEC---CH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIAIR---DV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~---~~~~~~~~~~~~~~~hi~f~v~---d~   79 (120)
                      .-+|.+.+++||.++|||++....+.  .  ..+++..++..+.+.....   .......+....+ .|++|.|+   |+
T Consensus        15 ~v~D~~~a~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~v~~~~dv   89 (141)
T 2rbb_A           15 FTRDIVAMSAFYQQVFGFQEIESIRS--P--IFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFDVDTKEAV   89 (141)
T ss_dssp             ECSCHHHHHHHHHHHHCCEECGGGCB--T--TEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEECSCHHHH
T ss_pred             EECCHHHHHHHHHHhcCCeeecccCC--C--ceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEEcCCHHHH
Confidence            45788889999999999999522211  1  1245666666676643210   0000000111223 49999999   59


Q ss_pred             HHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           80 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++++|+++|+++...    ++|.+.+||+|||||.|||.+..
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           90 DKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            99999999999998652    46789999999999999999854

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.68  E-value=2.4e-16  Score=95.30  Aligned_cols=98  Identities=12%  Similarity=0.080  Sum_probs=72.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CCHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RDVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d~d~   81 (120)
                      .-+|.+.+++||.++|||++.. ...    ...+|+..++ ..+.|.+.+..      +.  .+..|++|.|   +|+++
T Consensus        10 ~v~D~~~a~~FY~~~lG~~~~~-~~~----~~~~~~~~~~~~~l~l~~~~~~------~~--~~~~~~~~~v~~~~d~~~   76 (113)
T 1xqa_A           10 TVADVVAAREFLEKYFGLTCSG-TRG----NAFAVMRDNDGFILTLMKGKEV------QY--PKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEE-EET----TTEEEEECTTCCEEEEEECSSC------CC--CTTCCEEEECSSHHHHHH
T ss_pred             EeCCHHHHHHHHHHhCCCEEec-cCC----CcEEEEEcCCCcEEEEEeCCCC------CC--CceeEEEEEcCCHHHHHH
Confidence            4578889999999999999953 221    1236677654 46777654321      11  2357999999   88999


Q ss_pred             HHHHHHHCCCeEEec-CCCccEEEEeCCCCCeEEEE
Q 033399           82 LKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++|+++|+++... ..+.+.+||+|||||.|||+
T Consensus        77 ~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           77 INQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence            999999999997542 11268899999999999996

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.68  E-value=8.6e-16  Score=97.37  Aligned_cols=108  Identities=9%  Similarity=-0.092  Sum_probs=67.6

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCC---CCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~---~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      -+|.+.+++||.+++|+.. ....+   .....+...++..+.++....   .......+...+...|+||.|+   +++
T Consensus        17 V~Dl~~s~~FY~~lg~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~~~vd   92 (149)
T 4gym_A           17 VADVAASQAFFGTLGFEFN-PKFTD---ESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCVSAIDRDDVD   92 (149)
T ss_dssp             ESCHHHHHHHHHHTTCEEC-GGGCB---TTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEECSSHHHHH
T ss_pred             eCCHHHHHHHHHHhCCCcc-eeecC---CceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEEEeccHHHHH
Confidence            3678889999988655544 33322   112223333445555544211   1111111122234479999996   578


Q ss_pred             HHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++++|+.+...   .++.+++||+|||||+|||+..
T Consensus        93 ~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           93 RFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             HHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            8999999999998763   3456899999999999999853

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.66  E-value=1.2e-15  Score=108.89  Aligned_cols=111  Identities=15%  Similarity=0.148  Sum_probs=78.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCC-CCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~-~~~~~~~l~~g----~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d   78 (120)
                      .-+|.+.+++||.++|||++....++.+ .+....++...    +..|+|+..+...+  ..+. .++..|+||.|+  |
T Consensus        15 ~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~~~~-~~~~~hiaf~V~~~d   91 (335)
T 3oaj_A           15 IVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--GVIG-DGQVGVTSYVVPKGA   91 (335)
T ss_dssp             EESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--CBCC-BSEEEEEEEEECTTC
T ss_pred             EeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--CCCC-CCceEEEEEEecHHH
Confidence            4578899999999999999964322211 11111233322    35788887643221  1111 235689999999  9


Q ss_pred             HHHHHHHHHHCCCeEEe-cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           79 VSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~-~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++++|+++|+++.. ...+.+++||+|||||.|||++..
T Consensus        92 l~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           92 MAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             HHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             HHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            99999999999999875 346778999999999999999853

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.64  E-value=1e-15  Score=95.85  Aligned_cols=104  Identities=17%  Similarity=0.076  Sum_probs=68.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEE-----Eec-CCCCCCCCCCCCCCCcceEEEEECCH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l-----~~~-~~~~~~~~~~~~~~~~~hi~f~v~d~   79 (120)
                      .-+|.+.+++||.++|||++.. +..     ..+++. .+..++.     +.. +...+ .. .....+..|++|.|+|+
T Consensus        15 ~v~D~~~a~~FY~~~LG~~~~~-~~~-----~~~~~~-~g~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~v~dv   85 (141)
T 2qnt_A           15 FVRDINRSKSFYRDRLGLKILE-DFG-----SFVLFE-TGFAIHEGRSLEETIWRTSSD-AQ-EAYGRRNMLLYFEHADV   85 (141)
T ss_dssp             EESCHHHHHHHHHHTTCCCEEE-ECS-----SEEEET-TSCEEEEHHHHHHHHHSCCC---C-CCSCCSSCEEEEEESCH
T ss_pred             EECCHHHHHHHHHHhcCCEEEE-EcC-----CcEEEe-ccceeccCchhhhhccccCCc-cc-cccCCCceEEEEEeCcH
Confidence            3578889999999999999953 211     122332 2334431     110 10000 00 11123457999999999


Q ss_pred             HHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           80 SKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++++++|++ |+++..    .++|.+.+||+|||||.|||.+..
T Consensus        86 ~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           86 DAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             HHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            999999999 999755    246778999999999999999853

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.64  E-value=2.9e-15  Score=107.00  Aligned_cols=104  Identities=14%  Similarity=0.106  Sum_probs=74.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      +-+|.+.+.+||.++|||++. .+..     ..+++..|+  ..|+|+..+...+  ..+. .++++|+||.|+|   ++
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~-~~~~-----~~~~~~~g~~~~~l~l~~~~~~~~--~~~g-~g~~~HiAf~v~d~~~l~  230 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERV-GKEG-----DFVRYRSAGDIGNVIDLKLTPIGR--GQMG-AGTVHHIAWRANDDEDQL  230 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEE-EEET-----TEEEEECSSSSSCEEEEESSCCCB--CBCS-BTEEEEEEEEESSHHHHH
T ss_pred             EECCHHHHHHHHHHHhCCEEe-eccC-----CEEEEEeCCCCcEEEEEeCCCCCc--CCCC-CcceEEEEEEcCCHHHHH
Confidence            456888899999999999996 3221     124455553  4688876433211  1122 2457899999998   66


Q ss_pred             HHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...  ....+++||+|||||+|||...
T Consensus       231 ~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          231 DWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEES
T ss_pred             HHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeC
Confidence            7899999999987542  3456899999999999999875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.64  E-value=2.5e-15  Score=103.62  Aligned_cols=98  Identities=14%  Similarity=0.086  Sum_probs=76.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~~   83 (120)
                      ..+|.+.+++||.++|||++....+      ..+++..++..+.|...+..       .  .+..|+||.|+  ++++++
T Consensus        33 ~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~-------~--~~~~hiaf~V~~~dld~~~   97 (252)
T 3pkv_A           33 YTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG-------T--KPFYHIAINIAANHFQEGK   97 (252)
T ss_dssp             EESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT-------C--CCCCEEEEEECTTCHHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC-------C--CCeeEEEEEecHHHHHHHH
Confidence            4578899999999999999963222      24678888888888764321       1  13579999985  699999


Q ss_pred             HHHHHCCCeEEe---------cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           84 MILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        84 ~~l~~~Gv~~~~---------~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++|+++ +++..         ..++.+.+||+|||||.|||++.+
T Consensus        98 ~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           98 AWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             HHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             HHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            999999 98854         246789999999999999999864

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.60  E-value=8.3e-15  Score=92.77  Aligned_cols=102  Identities=14%  Similarity=-0.004  Sum_probs=66.4

Q ss_pred             eccchhhhhhhhhhccCceEec-cCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceE----------EE
Q 033399            6 KRKKREINKHQRFNLLGLEINE-ARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT----------CI   74 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi----------~f   74 (120)
                      .-+|.+.+++||.++|||++.. .+..  .+  ..++   +..|+|.. ..+..  . +... ...|+          +|
T Consensus        28 ~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~--~~~~---g~~l~l~~-~~~~~--~-~~~~-~~~~~~~g~~~~~~~~~   95 (148)
T 3bt3_A           28 FTKDMDKTVKWFEEILGWSGDIVARDD--EG--FGDY---GCVFDYPS-EVAVA--H-LTPF-RGFHLFKGEPIKGVAGF   95 (148)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECT--TS--CEEE---EEEESSCT-TTTSC--C---CC-CSEEEEESCCCSSEEEE
T ss_pred             EECCHHHHHHHHHhccCCEEEeeeecC--CC--ccEE---ccEEEEec-cCCCc--c-cccc-cccceeeccCCCccEEE
Confidence            4568888999999999999942 1111  11  2344   22344311 11110  0 0000 01232          65


Q ss_pred             -EECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           75 -AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        75 -~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                       .|+|+++++++|+++|+++...    ++|.+.+||+|||||.|||.+..
T Consensus        96 ~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           96 MMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             EEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence             9999999999999999987552    46778999999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.59  E-value=5.9e-15  Score=105.27  Aligned_cols=105  Identities=13%  Similarity=0.079  Sum_probs=74.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      ..+|-+.+.+||.++|||++.....+ ......+|+..++.  .+.+...+.+        ..++.+|+||.|+|   ++
T Consensus       160 ~v~D~~~a~~FY~~vLG~~~~~~~~~-~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~Hiaf~v~d~~~v~  230 (339)
T 3lm4_A          160 MSSDVTAVKDSFERHLGFRTTERVVD-GNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHHLAFFYGTGQHNI  230 (339)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEEEEEE-TTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEEEEEECCCHHHHH
T ss_pred             EcCCHHHHHHHHHHhCCCeEEEEEec-CCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeEEEEEeCCHHHHH
Confidence            34678889999999999999632111 11224567777653  5666653211        12357899999999   88


Q ss_pred             HHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|+++...     ..+.+++||+|||||.|||++..
T Consensus       231 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          231 DAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             HHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            8899999999998642     12357799999999999998643

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.58  E-value=1.5e-14  Score=102.90  Aligned_cols=103  Identities=16%  Similarity=0.217  Sum_probs=74.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~   81 (120)
                      .-+|.+.+.+||.++|||++....+.    ...+|+..++.  .+++......  .    ....+..|++|.|+  |+++
T Consensus       166 ~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~~~~l~~g~~~~~l~l~~~~~~--~----~~~~~~~hiaf~v~~~dld~  235 (330)
T 3zi1_A          166 AVSDLQKSLNYWCNLLGMKIYENDEE----KQRALLGYADNQCKLELQGVKGG--V----DHAAAFGRIAFSCPQKELPD  235 (330)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEETT----TTEEEEESSTTSCEEEEEECSSC--C----CCBTTCCEEEEEECGGGHHH
T ss_pred             ECCCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEeCCceEEEEECCCCCC--C----CCCCCCceEEEEEEcccHHH
Confidence            35688899999999999999643322    12467887764  4555433211  1    11123579999995  7999


Q ss_pred             HHHHHHHCCCeEEec--------CCCccEEEEeCCCCCeEEEEee
Q 033399           82 LKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~--------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++|+++|+++...        ..+.+++||+|||||.|||++.
T Consensus       236 ~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          236 LEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             HHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             HHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            999999999997542        2356899999999999999985

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.57  E-value=2.4e-14  Score=100.51  Aligned_cols=103  Identities=17%  Similarity=0.207  Sum_probs=71.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCC-CCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH-
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK-   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~-   81 (120)
                      .-+|.+.+++||.++|||++........ ......|+..++.  .+.+...+         . .++.+|+||.|+|+++ 
T Consensus       158 ~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~Hiaf~v~d~~~v  227 (309)
T 3hpy_A          158 YGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP---------E-KGKLHHCSFLLESWEQV  227 (309)
T ss_dssp             EESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS---------S-TTEEEEEEEECSSHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC---------C-CCceeEEEEECCCHHHH
Confidence            3467888999999999999853211100 1234567777653  34444321         1 2346899999998664 


Q ss_pred             --HHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           82 --LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        82 --~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                        ++++|+++|+++...     ..+.+++||+|||||+|||+..
T Consensus       228 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          228 LRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             HHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             HHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence              678999999998642     2346789999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.56  E-value=4.8e-14  Score=99.80  Aligned_cols=100  Identities=15%  Similarity=0.126  Sum_probs=70.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH--
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK--   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~--   81 (120)
                      .-.|-+.+++|| ++|||++..............|+..++  ..+.+...+         .  .+.+|+||.|+|+++  
T Consensus       159 ~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~---------~--~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          159 VTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------G--PRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------B--SEEEEEEEECSSHHHHH
T ss_pred             ecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC---------C--CCceEEEEECCCHHHHH
Confidence            346778889999 999999853211111122345676643  245554321         1  146899999999998  


Q ss_pred             -HHHHHHHCCC--eEEe-----cCCCccEEEEeCCCCCeEEEEe
Q 033399           82 -LKMILDKAGI--SYTL-----SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        82 -~~~~l~~~Gv--~~~~-----~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                       ++++|+++|+  ++..     ..++..++||+|||||.|||+.
T Consensus       227 ~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          227 QICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             HHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence             9999999999  8864     1345678999999999999985

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.56  E-value=6.8e-14  Score=90.73  Aligned_cols=105  Identities=10%  Similarity=-0.009  Sum_probs=68.9

Q ss_pred             hhhhhhhhhhccCceEeccC-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC--CCcceEEEEECCHH
Q 033399           10 REINKHQRFNLLGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG--GRDRHTCIAIRDVS   80 (120)
Q Consensus        10 ~~~~~~fy~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~--~~~~hi~f~v~d~d   80 (120)
                      .+.+++||.++||+++....       +........+.+..++..|.+.... +..  ..+...  +...|++|.|+|++
T Consensus        37 ~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~-~~~--~~~~~~~~~~g~~l~~~vdDvd  113 (166)
T 1xy7_A           37 VGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS-SLP--GFSTAKSEGSGVTFLLGTKDAE  113 (166)
T ss_dssp             HHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGG-GST--TCCCCCTTSCCCEEEEECSCHH
T ss_pred             HHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCC-ccc--CCccccCCCCcEEEEEEcCCHH
Confidence            78889999999999995221       1100112223466677777665421 110  001100  12249999999999


Q ss_pred             HHHHHHHHCCCeEEec------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|++ ..+      ++ .+.++|+||+||.|+|.+..
T Consensus       114 a~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          114 AAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             HHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC--
T ss_pred             HHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeec
Confidence            999999999999 653      35 68899999999999998853

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.55  E-value=7.3e-14  Score=97.53  Aligned_cols=103  Identities=11%  Similarity=0.175  Sum_probs=71.4

Q ss_pred             eccchhhhhhhhhhccCceEeccC--CC-------CCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 033399            6 KRKKREINKHQRFNLLGLEINEAR--PH-------DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI   74 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~--~~-------~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f   74 (120)
                      .-+|.+.+++||.++|||++....  +.       ........|+..++  ..+.+.+.+         . ..+.+|+||
T Consensus       149 ~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~g~~h~af  218 (300)
T 2zyq_A          149 STRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP---------T-SSGIVHLMV  218 (300)
T ss_dssp             ECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC---------C-SSSEEEEEE
T ss_pred             EeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC---------C-CCCceEEEE
Confidence            356888899999999999985211  10       00012346677654  246655321         1 124689999


Q ss_pred             EECCHHH---HHHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEee
Q 033399           75 AIRDVSK---LKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        75 ~v~d~d~---~~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .|+|+++   ++++|+++|+++...    . .+.+++||+|||||+|||.+.
T Consensus       219 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          219 EVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            9999665   599999999998652    2 336789999999999999863

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.55  E-value=1e-13  Score=96.69  Aligned_cols=105  Identities=14%  Similarity=0.063  Sum_probs=72.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      ..+|.+.+++||.++||+++.. .... .....+.+..++..+..+ .... +    +. .....|++|.|+|+++++++
T Consensus       171 ~v~D~~~a~~FY~~vlG~~~~~-~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~----~~-~~~~~~~~~~v~dvd~~~~~  241 (282)
T 3oxh_A          171 LTDKPDLALAFYEAVVGLTHSS-MEIA-AGQNYRVLKAGDAEVGGC-MEPP-M----PG-VPNHWHVYFAVDDADATAAK  241 (282)
T ss_dssp             ECSCHHHHHHHHHHHHCCEEEE-C--------CEEEEETTEEEEEE-ECCS-S----TT-CCSEEEEEEECSCHHHHHHH
T ss_pred             EcCCHHHHHHHHHHHhCCeeee-ccCC-CCcceEEEEcCCccEeee-cCCC-C----CC-CCCeEEEEEEeCCHHHHHHH
Confidence            3468889999999999999952 2200 111224456666543332 2211 1    11 11236899999999999999


Q ss_pred             HHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           86 LDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        86 l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      |+++|+++...    +++.+.+||+|||||.|||++..
T Consensus       242 ~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          242 AAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             HHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecC
Confidence            99999998652    45678999999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.55  E-value=2.9e-14  Score=99.45  Aligned_cols=97  Identities=15%  Similarity=0.076  Sum_probs=73.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~--i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      .-.|.+.+++||.++|||++.. +..     ..+++..++..  +.+...+           ..+..|++|.|+   |++
T Consensus        11 ~v~Dl~~s~~FY~~~LG~~~~~-~~~-----~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~f~v~~~~dl~   73 (297)
T 1lgt_A           11 AVSDVAAWRSFLTQKLGLMEAG-TTD-----NGDLFRIDSRAWRIAVQQGE-----------VDDLAFAGYEVADAAGLA   73 (297)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-EET-----TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEEESSHHHHH
T ss_pred             EcCCHHHHHHHHHHccCCEEee-cCC-----CeEEEEeCCCcEEEEEecCC-----------CCCccEEEEEeCCHHHHH
Confidence            4578899999999999999953 221     13677776543  3332211           124579999998   999


Q ss_pred             HHHHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++|+++...+       .+.+.+||+|||||.|||++..
T Consensus        74 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           74 QMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             HHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            99999999999987632       5678999999999999999853

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.55  E-value=6.1e-14  Score=98.19  Aligned_cols=102  Identities=17%  Similarity=0.196  Sum_probs=70.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCce-eEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYR-GAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DV   79 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~-~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~   79 (120)
                      .-+|.+.+++||.++|||++....... .+.. ..|+..++  ..+.+...+         . .+...|+||.|+   |+
T Consensus       157 ~v~D~~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~---------~-~g~~~hi~f~v~d~~dv  225 (307)
T 1mpy_A          157 YGDELPATYDLFTKVLGFYLAEQVLDE-NGTRVAQFLSLSTKAHDVAFIHHP---------E-KGRLHHVSFHLETWEDL  225 (307)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECT-TCCEEEEEEESSSBSCSEEEEECS---------S-SSEEEEEEEECSCHHHH
T ss_pred             EcCCHHHHHHHHHHHcCCeeEeeeecC-CCcEEEEEEEcCCCceeEEEecCC---------C-CCcceEEEEEcCCHHHH
Confidence            346788899999999999995321111 1212 24666643  245554321         1 123589999999   56


Q ss_pred             HHHHHHHHHCCCeEEec----CC-CccEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++|+++|+++...    .. ..+++||+|||||+|||.+.
T Consensus       226 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          226 LRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            67789999999998542    12 25689999999999999884

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.54  E-value=6.3e-14  Score=98.38  Aligned_cols=98  Identities=16%  Similarity=0.091  Sum_probs=72.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--   78 (120)
                      ..-+|.+.+++||.++|||++. .+..    ...+|+.. ++   ..+.+...+           ..+..|++|.|+|  
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~-~~~~----~~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~h~a~~v~~~~   77 (309)
T 3hpy_A           14 VRVLNLEEGIHFYRNVLGLVET-GRDD----QGRVYFKCWDERDHSCYIIREAD-----------TAGIDFFGFKVLDKA   77 (309)
T ss_dssp             EEESSHHHHHHHHHHTSCCEEE-EECT----TSCEEEECTTCCBSCSEEEEECS-----------SCEEEEEEEEESCHH
T ss_pred             EEcCCHHHHHHHHHhccCCEEE-EEcC----CCeEEEEeccCCCceEEEEEeCC-----------CCceeEEEEEECCHH
Confidence            3457889999999999999995 3321    12366765 43   244443321           1246899999986  


Q ss_pred             -HHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           79 -VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 -~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                       +++++++|+++|+++...     ..+.+++||+|||||.|||++.
T Consensus        78 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (309)
T 3hpy_A           78 TLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAE  123 (309)
T ss_dssp             HHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEc
Confidence             999999999999998763     3457899999999999999874

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.54  E-value=2.6e-14  Score=99.44  Aligned_cols=98  Identities=14%  Similarity=0.090  Sum_probs=72.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d~~   82 (120)
                      .-.|.+.+++||.++|||++.. +..     ..+|+..++..+.+......         ..+..|++|.|+   |++++
T Consensus        11 ~v~Dl~~a~~FY~~~lG~~~~~-~~~-----~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v~~~~dl~~~   75 (292)
T 1kw3_B           11 AVKDVPAWDHFLTKSVGLMAAG-SAG-----DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEVDDAAALERM   75 (292)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-EET-----TEEEEESSSBSCSEEEEECT---------TCEEEEEEEECSSHHHHHHH
T ss_pred             EeCCHHHHHHHHHhcCCCEEee-cCC-----CeEEEEcCCceEEEEEccCC---------CCCccEEEEEECCHHHHHHH
Confidence            4578889999999999999953 221     23567766543222211110         123579999998   89999


Q ss_pred             HHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...+       ++.+++||+|||||.|||++.
T Consensus        76 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  118 (292)
T 1kw3_B           76 ADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (292)
T ss_dssp             HHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEEC
Confidence            999999999987632       457889999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.54  E-value=6.4e-14  Score=99.65  Aligned_cols=103  Identities=13%  Similarity=0.166  Sum_probs=71.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC--Ce--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---C
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG--AE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---D   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d   78 (120)
                      .-+|.+.+++||.++|||++.. +..     ..+++..+  +.  .++.+....  +. ..+. .++..|+||.|+   |
T Consensus       187 ~v~Dl~~a~~FY~~~LG~~~~~-~~~-----~~~~~~~~~~g~~~~~~~~~~~~--~~-~~~~-~~~~~hiaf~v~~~~d  256 (338)
T 1zsw_A          187 TVRRLDKMASTLTEIFGYTEVS-RND-----QEAIFQSIKGEAFGEIVVKYLDG--PT-EKPG-RGSIHHLAIRVKNDAE  256 (338)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-ECS-----SEEEEESSTTCSTTCEEEEECCS--SB-CBCC-BTCEEEEEEEESSHHH
T ss_pred             EECCHHHHHHHHHHhcCCEEEe-ecC-----CeEEEEecCCCCceEEEEeccCC--CC-CCCC-CCceEEEEEEeCCHHH
Confidence            4578888999999999999953 221     12445552  32  444443311  10 1111 234689999998   6


Q ss_pred             HHHHHHHHHHCCCeEEe--cCCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~--~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++..  ...+.+.+||+|||||.|||++.
T Consensus       257 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          257 LAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             HHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEc
Confidence            99999999999999853  13567889999999999999975

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.54  E-value=2e-13  Score=94.76  Aligned_cols=100  Identities=14%  Similarity=0.038  Sum_probs=70.1

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-CHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-DVSKL   82 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-d~d~~   82 (120)
                      .|.+.+++||.++||+++....++   ....+.+..++    ..+.+...+.        ...+...+++|.|+ |++++
T Consensus       192 ~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v~~dvd~~  260 (301)
T 2zw5_A          192 RDVAATLRLVEAALGARTAFAIGD---PPEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHLDAAGTADSL  260 (301)
T ss_dssp             SCHHHHHHHHHHHSCCEEEEEEET---TEEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEEEEESCHHHH
T ss_pred             CCHHHHHHHHHHhcCCeEeeecCC---CccEEEEEcCCCccccccccccCCC--------cCCCCceEEEEEcCccHHHH
Confidence            678889999999999999522111   11112355555    3333322111        11112358999999 99999


Q ss_pred             HHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++...    ++|.+.++|+|||||.|||.++
T Consensus       261 ~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          261 HRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            99999999998652    4678899999999999999885

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.53  E-value=8.7e-14  Score=98.01  Aligned_cols=96  Identities=14%  Similarity=0.141  Sum_probs=71.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH-
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL-   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~-   82 (120)
                      .-.|.+.+.+||.++|||++.. +..    ...+|+.+++.  .+.+.+.         +   .+.+|++|.|+|++++ 
T Consensus       148 ~v~D~~~a~~FY~~~LG~~~~~-~~~----~~~~fl~~~~~~~~l~l~~~---------~---~g~~hi~f~v~d~d~~~  210 (310)
T 3b59_A          148 HSPNHQDMVKFFTDVLGFKVSD-WLG----DFMCFLRCNSAHHRIAILPG---------P---PCLNHVAYDMLSVDDMM  210 (310)
T ss_dssp             EETTHHHHHHHHHHTSCCEEEE-EET----TTEEEEESSSBSCSEEEEES---------S---SEEEEEEEECSSHHHHH
T ss_pred             ecCCHHHHHHHHHhCCCCEEEE-eeC----CeEEEEecCCCcceEEEECC---------C---CceEEEEEEcCCHHHHH
Confidence            3467888899999999999952 211    13567777543  4555432         1   2368999999998777 


Q ss_pred             --HHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEee
Q 033399           83 --KMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 --~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                        +++|+++|+++...    . .+.+++||+|||||.|||.+.
T Consensus       211 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          211 RGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             HHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence              99999999987552    2 345789999999999999874

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.53  E-value=4.9e-14  Score=100.22  Aligned_cols=109  Identities=15%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeE-E--EEeC----CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGA-W--LWVG----AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   77 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~-~--l~~g----~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-   77 (120)
                      .-+|.+.+++||.++|||++......  ...... +  +..+    +..+.+++.+....  .. ....+..|++|.|+ 
T Consensus        37 ~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~--~~-~~~~~~~hiaf~v~~  111 (338)
T 1zsw_A           37 VTKNANENNHFYKNVLGLRRVKMTVN--QDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--TY-RGTNAITRIGLLVPS  111 (338)
T ss_dssp             EESCHHHHHHHHHTTTCCEEEEEEEE--TTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--CB-CCBSEEEEEEEEESC
T ss_pred             EcCCHHHHHHHHHHhcCCEEEEeecc--cCCCceEEEEEcCCCCCCCCEEEEEECCCCcc--Cc-CCCCCeeeEEEEcCC
Confidence            45788999999999999999532111  111222 2  2222    24677766433211  01 11234679999998 


Q ss_pred             --CHHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEeeC
Q 033399           78 --DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        78 --d~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                        |+++++++|+++|+++...  .+|.+.+||+|||||.|||++..
T Consensus       112 ~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          112 EDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             HHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             HHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence              6999999999999998653  35668999999999999999853

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.51  E-value=1.7e-13  Score=96.00  Aligned_cols=97  Identities=13%  Similarity=0.160  Sum_probs=73.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      .-.|.+.+++||.++|||++...+..     ..+|+..++  ..+.|...+           ..+..|++|.|+   |++
T Consensus        13 ~v~Dl~~a~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~f~v~~~~dl~   76 (305)
T 2wl9_A           13 SVSNLDAWRDYAAGIMGMQVVDDGED-----DRIYLRMDRWHHRIVLHADG-----------SDDLAYIGWRVAGPVELD   76 (305)
T ss_dssp             ECSCHHHHHHHHTTTTCCEEECCSCT-----TEEEEECSSBSCSEEEECSS-----------CCEEEEEEEECSSHHHHH
T ss_pred             EeCCHHHHHHHHHhccCCEEeeccCC-----CeEEEEeCCCeEEEEEEECC-----------CCCeEEEEEEECCHHHHH
Confidence            45788889999999999999531221     246777766  456664321           123589999997   699


Q ss_pred             HHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...       .++.+.+||+|||||.|||++.
T Consensus        77 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           77 ELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             HHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            9999999999998753       2346889999999999999875

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.50  E-value=1.2e-13  Score=98.39  Aligned_cols=105  Identities=11%  Similarity=0.019  Sum_probs=72.4

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCC-----------CCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCc
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHD-----------KLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   69 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~   69 (120)
                      -+-+|.+.+++||.++|||++.......           ...+..+++..++    ..++|.......+    .....+.
T Consensus        33 l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~----~~~~~g~  108 (330)
T 3zi1_A           33 FKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGD----YKLGNDF  108 (330)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCC----CCBCSSE
T ss_pred             EEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCc----cccCCCe
Confidence            4567899999999999999985322110           1123345666642    3577765332211    1112356


Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           70 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .|+||.|+|+   .++++++|+++...+.  ..+||+|||||.|||++.
T Consensus       109 ~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~  152 (330)
T 3zi1_A          109 MGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNR  152 (330)
T ss_dssp             EEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESS
T ss_pred             eEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEec
Confidence            8999999987   6788899999987543  489999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.50  E-value=1.3e-13  Score=96.18  Aligned_cols=97  Identities=15%  Similarity=0.174  Sum_probs=71.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d   80 (120)
                      .-.|.+.+++||.++|||++...+..     ..+|+..++.  .+.+...+           ..+..|++|.|+|   ++
T Consensus        12 ~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~~~v~~~~dl~   75 (300)
T 2zyq_A           12 EATDMAAWREYGLKVLGMVEGKGAPE-----GALYLRMDDFPARLVVVPGE-----------HDRLLEAGWECANAEGLQ   75 (300)
T ss_dssp             EESCHHHHHHHHHHTSCCEECSSCCS-----SCEEEESSSSSCSEEEEECS-----------SCEEEEEEEECSSHHHHH
T ss_pred             EeCCHHHHHHHHHHccCCEEeccCCC-----CeEEEEeCCCcEEEEEecCC-----------CCCcceEEEEeCCHHHHH
Confidence            45788899999999999999521221     2367777653  34443311           1245799999975   88


Q ss_pred             HHHHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...+       ++.+.+||+|||||.|||++.
T Consensus        76 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           76 EIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             HHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            99999999999987531       557889999999999999985

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.50  E-value=2.6e-13  Score=94.60  Aligned_cols=107  Identities=17%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCc-eeEEEEeCCeE-EEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPY-RGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~-i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~   83 (120)
                      .-.|.+.+++||.++||+++....+.  .+. ...++..++.. ..+...+...     +.......|++|.|+|+++++
T Consensus        39 ~v~D~~~a~~FY~~vlG~~~~~~~~~--~~~~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~v~d~d~~~  111 (282)
T 3oxh_A           39 QTTDQSAAKKFYTSLFGWGYDDNPVP--GGGGVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIAVDDVDAVV  111 (282)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEEEC-------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEECSCHHHHH
T ss_pred             ecCCHHHHHHHHHHhcCcEEeecCCC--CCccCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEEeCCHHHHH
Confidence            35688899999999999999532211  110 23445666653 3344332211     111122368999999999999


Q ss_pred             HHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           84 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        84 ~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++|+++|+++...    ....+.++|+||+||.|||++..
T Consensus       112 ~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          112 DKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             TTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             HHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            9999999998653    23458899999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.49  E-value=1.6e-13  Score=96.14  Aligned_cols=97  Identities=16%  Similarity=0.080  Sum_probs=71.9

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      .-.|.+.+++||.++|||++. .+..    ....|+.+++  ..+.|...+           ..+..|++|.|+   |++
T Consensus        16 ~v~Dl~~a~~FY~~~LG~~~~-~~~~----~~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~~~v~~~~dl~   79 (302)
T 2ehz_A           16 SVKDPDAWKSFATDMLGLQVL-DEGE----KDRFYLRMDYWHHRIVVHHNG-----------QDDLEYLGWRVAGKPEFE   79 (302)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEE-CCSC----SSEEEEESSSBSCSEEEESSC-----------CSEEEEEEEEESSHHHHH
T ss_pred             EeCCHHHHHHHHHhcCCCEEE-eccC----CcceEEEeCCCceEEEEecCC-----------CCCeeEEEEEECCHHHHH
Confidence            457888999999999999995 3221    1346777643  345553211           123579999995   699


Q ss_pred             HHHHHHHHCCCeEEecC-------CCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~-------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...+       ++.+.+||+|||||.|||++.
T Consensus        80 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           80 ALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             HHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             HHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            99999999999987642       346889999999999999875

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.49  E-value=2.4e-13  Score=95.29  Aligned_cols=102  Identities=15%  Similarity=0.095  Sum_probs=68.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCC---CCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPH---DKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--   78 (120)
                      .-+|.+.+++|| ++|||++......   .......+|+..++.  .+.+...         +. .++.+|+||.|+|  
T Consensus       153 ~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~hiaf~v~d~~  221 (305)
T 2wl9_A          153 REDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG---------PM-DKRINHLMIEYTHLD  221 (305)
T ss_dssp             CCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS---------CC-SSSEEEEEEEESSHH
T ss_pred             ECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC---------CC-CCCceEEEEEcCCHH
Confidence            346788889999 9999999521110   000123456766542  3444221         11 1346899999998  


Q ss_pred             -HHHHHHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEee
Q 033399           79 -VSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 -~d~~~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                       +++++++|+++|+++...    . .+.+++||+|||||.|||++.
T Consensus       222 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          222 DLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence             567888999999998753    1 235678999999999999863

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.48  E-value=1e-13  Score=97.05  Aligned_cols=99  Identities=14%  Similarity=0.068  Sum_probs=72.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d~d   80 (120)
                      .-.|.+.+++||.++|||++.. +..    ...+++..++  ..+.|......       .  .+..|++|.|   +|++
T Consensus        14 ~v~Dl~~a~~FY~~~lG~~~~~-~~~----~~~~~l~~~~~~~~~~l~~~~~~-------~--~~~~~~~f~v~~~~dv~   79 (307)
T 1mpy_A           14 RVLDMSKALEHYVELLGLIEMD-RDD----QGRVYLKAWTEVDKFSLVLREAD-------E--PGMDFMGFKVVDEDALR   79 (307)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-ECT----TSCEEEECTTCCBSCSEEEEECS-------S--CEEEEEEEEESCHHHHH
T ss_pred             EeCCHHHHHHHHHHccCCEEEe-ecC----CCcEEEEecCCCCceEEEEccCC-------C--CCcceEEEEeCCHHHHH
Confidence            4578889999999999999953 321    1236777643  23333322211       1  1357999999   7999


Q ss_pred             HHHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...+     ++.+.++|+|||||.|||++.
T Consensus        80 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           80 QLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             HHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            99999999999987632     356889999999999999984

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.48  E-value=5.8e-13  Score=92.81  Aligned_cols=102  Identities=10%  Similarity=0.131  Sum_probs=69.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCC---CCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~---~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      .-.|.+.+++||.++|||++......   ........|+..++  ..+.+.+.+         . .++.+|++|.|+|++
T Consensus       149 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~---------~-~~~~~hiaf~v~d~~  218 (297)
T 1lgt_A          149 CVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFP---------L-PKRIHHFMLEVASLD  218 (297)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCC---------C-SSSEEEEEEEBSCHH
T ss_pred             ecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcCC---------C-CCCceEEEEeCCCHH
Confidence            34678888999999999999521100   00012345666654  345554321         1 124689999999988


Q ss_pred             HHH---HHHHHCCCeEEec----CCC-ccEEEEeCCCCCeEEEEee
Q 033399           81 KLK---MILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~---~~l~~~Gv~~~~~----~~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++.   ++ +++|+++...    +.+ ..++||+|||||+|||++.
T Consensus       219 ~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          219 DVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             HHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            776   88 9999998653    233 5569999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.47  E-value=2.1e-13  Score=97.76  Aligned_cols=110  Identities=10%  Similarity=0.091  Sum_probs=74.8

Q ss_pred             chhhhhhhhhhccCceEeccC--CCCCCCceeEEEEeCC--eEEEEEecCCCCCCCC-----CCCCCCCcceEEEEECCH
Q 033399            9 KREINKHQRFNLLGLEINEAR--PHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSG-----RPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         9 ~~~~~~~fy~~vLG~~~~~~~--~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~-----~~~~~~~~~hi~f~v~d~   79 (120)
                      |-+.+.+||.++|||++....  +.........|+..++  ..|+|++.........     ......+.+||||.|+|+
T Consensus       170 D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~~g~~Hiaf~v~Di  249 (357)
T 2r5v_A          170 DLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQHIAFNSNDA  249 (357)
T ss_dssp             CHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHHHHTSSEEEEEEEECSCH
T ss_pred             hHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHHhcCCCCccEEEEEcCCH
Confidence            788889999999999996321  0100122446677743  4788876432211000     000123579999999999


Q ss_pred             HHHHHHHHHCCCeEEecC------CCc---------------cEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLSK------SGR---------------PAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~~------~g~---------------~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++|+++|+++...+      ++.               ..+|++||||++|||++.
T Consensus       250 ~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          250 VRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            999999999999986632      121               379999999999999983

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.46  E-value=3.5e-13  Score=94.37  Aligned_cols=102  Identities=13%  Similarity=0.108  Sum_probs=67.1

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      .-+|.+.+++|| ++|||++.......  .. .....|+..++.  .+.+...         +. .++.+|+||.|+|++
T Consensus       156 ~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~hiaf~v~d~~  224 (302)
T 2ehz_A          156 RQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAM---------PA-AKRLNHLMLEYTHME  224 (302)
T ss_dssp             CCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSC---------CC-SSSEEEEEEEESSHH
T ss_pred             EcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecC---------CC-CCceeEEEEEcCCHH
Confidence            346788889999 99999984211000  00 123356665532  3333211         11 134689999999876


Q ss_pred             H---HHHHHHHCCCeEEec----C-CCccEEEEeCCCCCeEEEEee
Q 033399           81 K---LKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~---~~~~l~~~Gv~~~~~----~-~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +   ++++|+++|+++...    . .+.+++||+|||||.|||+..
T Consensus       225 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          225 DLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             HHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            5   677999999998752    2 345789999999999999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.46  E-value=5.2e-13  Score=94.03  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=73.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RD   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d   78 (120)
                      ...|.+.+++||.++|||++.. +..     ..+++..++    ..+.|.+.+           ..+..|++|.|   +|
T Consensus        15 ~v~Dl~~a~~FY~~vlG~~~~~-~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~~~~~~v~~~~d   77 (310)
T 3b59_A           15 GVKDFDAEKAFYADVWGLEPVG-EDA-----NNAWFKAQGADEHHVVQLRRAD-----------ENRIDVIALAADSRSD   77 (310)
T ss_dssp             EESSHHHHHHHHHHTTCCEEEE-ECS-----SEEEEECTTSCCSCSEEEEECS-----------SCEEEEEEEEESSHHH
T ss_pred             ecCCHHHHHHHHHhCcCCEEee-ecC-----CeEEEEECCCCCCEEEEEEECC-----------CCCeeEEEEEeCCHHH
Confidence            4578899999999999999953 221     246777765    456665421           12357999999   68


Q ss_pred             HHHHHHHHHHCCCeEEec------CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...      +++.+.++|+||+||.|||++.
T Consensus        78 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  123 (310)
T 3b59_A           78 VDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSD  123 (310)
T ss_dssp             HHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEc
Confidence            999999999999998652      3467889999999999999874

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.45  E-value=1.5e-12  Score=92.81  Aligned_cols=97  Identities=14%  Similarity=0.123  Sum_probs=71.5

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeC-C---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVG-A---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g-~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--   78 (120)
                      ..-.|.+.+++||.++|||++.. +..     ..+|+... +   ..+.+...+           ..+..|++|.|+|  
T Consensus        17 l~v~Dl~~a~~FY~~vLG~~~~~-~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~g~~~~af~v~~~~   79 (339)
T 3lm4_A           17 LFSPKPQETLDFFTKFLGMYVTH-REG-----QSVYLRGYEDPYPWSLKITEAP-----------EAGMGHAAMRTSSPE   79 (339)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEE-EET-----TEEEEECTTCSSSCSEEEEECS-----------SCEEEEEEEEESSHH
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEE-ecC-----CEEEEEecCCCCceEEEEeeCC-----------CCCcceEEEEeCCHH
Confidence            34578899999999999999953 211     23566652 2   234443221           1236899999997  


Q ss_pred             -HHHHHHHHHHCCCeEEec---CCCccEEEEeCCCCCeEEEEee
Q 033399           79 -VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 -~d~~~~~l~~~Gv~~~~~---~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                       +++++++|+++|+++...   .++.+.++|+|||||.|||+..
T Consensus        80 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           80 ALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence             999999999999999763   3447899999999999999763

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.44  E-value=2.4e-12  Score=92.86  Aligned_cols=96  Identities=18%  Similarity=0.157  Sum_probs=71.1

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--   78 (120)
                      .+-.|.+.+++||.++|||+++ .+.+     ..+||..++.    .+.|...+           ..+..|++|.|.+  
T Consensus        23 l~V~DLe~s~~FY~dvLGL~~~-~~~~-----~~~~lr~~~~~~~~~l~l~~~~-----------~~gl~~~a~~v~s~~   85 (365)
T 4ghg_A           23 LVVTDLAKSRNFYVDVLGLHVS-YEDE-----NQIYLRSFEEFIHHNLVLTKGP-----------VAALKAMAFRVRTPE   85 (365)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEE-EECS-----SEEEEECTTCCSSCSEEEEECS-----------SCEEEEEEEEESSHH
T ss_pred             EEeCCHHHHHHHHhhCCCCEEE-EEcC-----CEEEEEeCCCCcceEEEeccCC-----------CCCcceEEEEeCCHH
Confidence            3457889999999999999996 3322     3467776542    24443221           1246899999974  


Q ss_pred             -HHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEe
Q 033399           79 -VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        79 -~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                       ++++.++|+++|+++...     +.+.+.++|+|||||.|||+.
T Consensus        86 dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           86 DVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             HHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             HHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence             888999999999998762     234678999999999999985

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.43  E-value=6.3e-13  Score=92.44  Aligned_cols=101  Identities=15%  Similarity=0.131  Sum_probs=68.1

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCC---CCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHD---KLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   81 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~---~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~   81 (120)
                      -.|.+.+++||.++|||++.......   ......+|+..++  ..+.+.+.+         . .++.+|+||.|+|+++
T Consensus       150 v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~hiaf~v~d~~~  219 (292)
T 1kw3_B          150 VPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP---------I-PKRIHHFMLQANTIDD  219 (292)
T ss_dssp             CSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS---------C-SSSEEEEEEEBSSHHH
T ss_pred             cCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCC---------C-CCceEEEEEEcCCHHH
Confidence            46788889999999999995211100   0012335666653  245554321         1 1246899999998765


Q ss_pred             ---HHHHHHHCCCeEEec----CC-CccEEEEeCCCCC-eEEEEee
Q 033399           82 ---LKMILDKAGISYTLS----KS-GRPAIFTRDPDAN-ALEFTQV  118 (120)
Q Consensus        82 ---~~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn-~iEl~~~  118 (120)
                         ++++|+ +|+++...    .. +.+++||+||||| .|||.+.
T Consensus       220 v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          220 VGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             HHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             HHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence               677999 99988653    22 3567899999999 9999874

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.42  E-value=1.7e-12  Score=91.75  Aligned_cols=96  Identities=14%  Similarity=0.109  Sum_probs=72.0

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEE---CC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RD   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d   78 (120)
                      .-.|.+.+++||.++|||++. .+..     ..+++.. ++   ..+.+.+..           ..+..|++|.|   +|
T Consensus        24 ~v~Dl~~a~~FY~~vlG~~~~-~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~~~~f~v~~~~d   86 (323)
T 1f1u_A           24 VVTDLAKSREFYVDVLGLHVT-EEDE-----NTIYLRSLEEFIHHNLVLRQGP-----------IAAVAAFAYRVKSPAE   86 (323)
T ss_dssp             EESCHHHHHHHHTTTTCCEEE-EECS-----SEEEEECTTCCSSCSEEEEECS-----------SCEEEEEEEEESSHHH
T ss_pred             EeCCHHHHHHHHHhCCCCEEe-eecC-----CEEEEEecCCCCcEEEEEEECC-----------CCCeeEEEEEeCCHHH
Confidence            457888999999999999995 3221     2467765 32   245554321           11357999999   78


Q ss_pred             HHHHHHHHHHCCCeEEecC-----CCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~~-----~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...+     ++.+.++|+||+||.|||++.
T Consensus        87 l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           87 VDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             HHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            9999999999999987632     346889999999999999874

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=9.8e-12  Score=79.12  Aligned_cols=109  Identities=12%  Similarity=-0.073  Sum_probs=72.9

Q ss_pred             eeccchhhhhhhhhhccCceEecc-C-CCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEA-R-PHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   72 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~-~-~~~~----------~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi   72 (120)
                      +=.+|.+.+.+||.++||+++... + .+.+          .....+-+.+++..+.+.... +..  ..+. ..+ .++
T Consensus        10 ~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~--~~~~-~~g-~~l   84 (149)
T 1u6l_A           10 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY--PYEG-IKG-CSI   84 (149)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS--CCCC-CCS-EEE
T ss_pred             EECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc--CCCC-CCc-eEE
Confidence            334688999999999999998521 1 0100          011223366677766665421 110  1111 112 489


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           73 CIAIRD---VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        73 ~f~v~d---~d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +|.|+|   +++++++|+ .|.++..    .+||.+.++|+||+||.|+|.+..
T Consensus        85 ~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           85 SLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             EEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             EEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence            999998   789999985 7888765    368888999999999999998754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.39  E-value=2.5e-11  Score=75.96  Aligned_cols=104  Identities=12%  Similarity=0.059  Sum_probs=71.9

Q ss_pred             chhhhhhhhhhcc-CceEecc-C-CCC----CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 033399            9 KREINKHQRFNLL-GLEINEA-R-PHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   78 (120)
Q Consensus         9 ~~~~~~~fy~~vL-G~~~~~~-~-~~~----~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---   78 (120)
                      |.+.+.+||.++| |+++... + ++.    ......+-+.+++..+.+...... +.  .+.  +....++|.|+|   
T Consensus        17 d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~-~~--~~~--~~~~~l~~~v~d~~e   91 (136)
T 1u7i_A           17 QAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVR-HA--FDF--TPAFSFFVDCESNAQ   91 (136)
T ss_dssp             CHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSC-CS--CCC--CTTEEEEEECCCHHH
T ss_pred             CHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCC-CC--CCC--CCceEEEEEcCCHHH
Confidence            8899999999999 9999521 1 110    011122346667776655543211 10  011  122479999999   


Q ss_pred             HHHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+ +|.++..    .++|.+..+|+||+||.|+|.+.
T Consensus        92 vd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           92 IERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             HHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            999999999 9999876    35788889999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.30  E-value=4e-11  Score=86.83  Aligned_cols=115  Identities=11%  Similarity=0.059  Sum_probs=77.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC--CCCCCceeEEEEeCCeEEEEEecCCCCCC----CCC--CCCCCCcceEEEEE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPL----SGR--PEHGGRDRHTCIAI   76 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~i~l~~~~~~~~~----~~~--~~~~~~~~hi~f~v   76 (120)
                      +.-.|.+.+.+||.++|||++.....  .+........+..++..+.|....++...    ...  ..++.+..|+||+|
T Consensus        28 i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~gv~~iaf~V  107 (381)
T 1t47_A           28 FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEV  107 (381)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEEEEEEC
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcCCceEEEEEEE
Confidence            34578888999999999999963210  11012233445667777777763222110    000  01123578999999


Q ss_pred             CCHHHHHHHHHHCCCeEEecC------CC-ccEEEEeCCCCCeEEEEeeC
Q 033399           77 RDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        77 ~d~d~~~~~l~~~Gv~~~~~~------~g-~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +|+++++++|+++|+++...+      .| .+.++|+||+|+.++|++..
T Consensus       108 ~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A          108 PDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            999999999999999987532      12 35788999999999999864

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.27  E-value=1e-10  Score=73.85  Aligned_cols=105  Identities=9%  Similarity=0.028  Sum_probs=71.0

Q ss_pred             eeeccchhhhhhhhhhcc-CceEecc-C-CCC----CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 033399            4 KYKRKKREINKHQRFNLL-GLEINEA-R-PHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   76 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vL-G~~~~~~-~-~~~----~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v   76 (120)
                      -|=.++.+...+||.++| |+++... + .+.    ......+-+.+++..+.+.... +.    .+  . . ..+++.|
T Consensus        10 l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~----~~--~-~-~sl~~~~   80 (139)
T 1tsj_A           10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SG----TE--L-P-ISLFVTV   80 (139)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-CCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CC----CC--c-e-EEEEEEC
Confidence            344568899999999999 9999521 1 110    0122234466777765554321 10    01  1 1 4689999


Q ss_pred             CC---HHHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           77 RD---VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        77 ~d---~d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|   +++++++|+ .|.++..    .+||.+..+|+||+|+.|+|...
T Consensus        81 ~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           81 KDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            87   788899998 6998876    36999999999999999999874

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.25  E-value=5.1e-11  Score=85.98  Aligned_cols=101  Identities=17%  Similarity=0.147  Sum_probs=66.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH-
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL-   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~-   82 (120)
                      .-.|.+.+..||. .|||.++............+|+.+++.  .+.+...+           .++++|+||+|+|++++ 
T Consensus       159 ~v~D~~~t~~Fy~-~LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~-----------~~~lhHvaf~v~d~d~v~  226 (365)
T 4ghg_A          159 VTPDVPRGRKYLE-DLGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGN-----------GPRLHHVAFSTHEKHNII  226 (365)
T ss_dssp             EESCHHHHHHHHH-HTTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESS-----------BSEEEEEEEECSSHHHHH
T ss_pred             eecCHHHHHHHHH-hcCCEEEEEEecCCCceeEEeeecCCcccceeeecCC-----------CCceeEEEEecCCHHHHH
Confidence            3456777888985 599998632111112234567777543  45554321           13579999999987764 


Q ss_pred             --HHHHHHCCCeE--Eec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           83 --KMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 --~~~l~~~Gv~~--~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                        +++|+++|+..  ...     .....++||+||+||+||+...
T Consensus       227 ~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          227 QICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             HHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence              57889999853  221     2446789999999999999763

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.22  E-value=2.1e-11  Score=87.29  Aligned_cols=113  Identities=13%  Similarity=0.053  Sum_probs=75.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEECCHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRDVSKL   82 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~d~d~~   82 (120)
                      +.-.|.+.+.+||.++|||+++...... .+ ....+..|+..+.|.....+.....  ...+..+..|+||.|+|++++
T Consensus        11 ~~v~D~~~a~~fy~~~LGf~~~~~~~~~-~g-~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf~V~D~~~~   88 (357)
T 2r5v_A           11 MYVENLEVAAFSWVDKYAFAVAGTSRSA-DH-RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAMATSDVAAA   88 (357)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEET-TE-EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEEEESCHHHH
T ss_pred             EEECCHHHHHHHHHHcCCCeEEEEEcCC-Cc-eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEEEECCHHHH
Confidence            3457888899999999999996322110 11 2233555776777754222211000  001123568999999999999


Q ss_pred             HHHHHHCCCeEEecC----CC-ccEEEEeCCCCCeEEEEeeC
Q 033399           83 KMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~~----~g-~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++++|+++...+    .| .+.+.|+||+|..++|++..
T Consensus        89 ~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           89 YEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             HHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             HHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            999999999987522    23 46788999999999999864

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.21  E-value=1e-09  Score=69.18  Aligned_cols=108  Identities=10%  Similarity=-0.050  Sum_probs=74.1

Q ss_pred             eeeccchhhhhhhhhhccC-ceEecc-C-----CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 033399            4 KYKRKKREINKHQRFNLLG-LEINEA-R-----PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   76 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG-~~~~~~-~-----~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v   76 (120)
                      =|=+++.+....||.++|| .++... +     +........+.|.+++..|.+........    .. .+....++|.|
T Consensus        15 L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~----~~-~~~~~~l~l~~   89 (138)
T 3oms_A           15 LMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHN----FT-FTPAMSLYVTC   89 (138)
T ss_dssp             EEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCS----CC-CCTTSCEEEEE
T ss_pred             EEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCC----CC-CCCCEEEEEEc
Confidence            3445678999999999999 566311 1     11111233456788888887765321111    01 11235799999


Q ss_pred             CC---HHHHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEe
Q 033399           77 RD---VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        77 ~d---~d~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +|   +++++++|+ .|.++..    .+||.+..+|+||+|+.|+|..
T Consensus        90 ~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           90 ETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            99   999999996 5777765    3688899999999999999975

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.21  E-value=7.1e-10  Score=72.36  Aligned_cols=108  Identities=8%  Similarity=-0.120  Sum_probs=74.4

Q ss_pred             eeeccchhhhhhhhhhccCceEeccCC--CC------------CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 033399            4 KYKRKKREINKHQRFNLLGLEINEARP--HD------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   69 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG~~~~~~~~--~~------------~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~   69 (120)
                      =|=. +.+....||.++||+++....+  +.            ....-.+-|.+++..|.+.......     +... ..
T Consensus        31 L~f~-~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~~-----~~~~-~~  103 (172)
T 3l20_A           31 IAFE-NSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGRA-----DKIN-NG  103 (172)
T ss_dssp             EEES-CHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTCC-----CCCC-SS
T ss_pred             EEEC-CHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCCC-----CCCC-Cc
Confidence            3444 8888999999999999752211  10            0112335577888888776632111     1111 22


Q ss_pred             ceEEEEE--------CCHHHHHHHHHHCC-CeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           70 RHTCIAI--------RDVSKLKMILDKAG-ISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        70 ~hi~f~v--------~d~d~~~~~l~~~G-v~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ..+++.|        +|+++++++|++.| +++..    .+||.+..+|+||+|+.|+|...
T Consensus       104 ~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          104 ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            4677777        57899999999999 78766    36898999999999999999753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.16  E-value=3.6e-11  Score=88.36  Aligned_cols=116  Identities=12%  Similarity=0.018  Sum_probs=78.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCC--CCCCceeEEEEeCCeEEEEEecCCCCC--C-------CCCC----------
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDP--L-------SGRP----------   63 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~i~l~~~~~~~~--~-------~~~~----------   63 (120)
                      +.-.|.+.+.+||.++|||++......  +.......++..++..+.|.....+..  .       ...+          
T Consensus        31 i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  110 (424)
T 1sqd_A           31 FWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSF  110 (424)
T ss_dssp             EECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHHHHHHH
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccccccccchHHHHH
Confidence            345788999999999999998532211  011223344666777788876522210  0       0000          


Q ss_pred             --CCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC----CCccEEEEeCCCCCeEEEEeeCC
Q 033399           64 --EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        64 --~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~----~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                        .+..+..|+||+|+|+++++++|+++|+++...+    ...+...+++|+|++++|+++.|
T Consensus       111 ~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~g  173 (424)
T 1sqd_A          111 FSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  173 (424)
T ss_dssp             HHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             HHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecCC
Confidence              1124578999999999999999999999987632    33467788899999999998764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.08  E-value=2.9e-09  Score=72.53  Aligned_cols=102  Identities=15%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             eeeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe-EE-EEEecCCCCCCCCCCCCCCCcceE---EEEECC
Q 033399            4 KYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE-MI-HLMELPNPDPLSGRPEHGGRDRHT---CIAIRD   78 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~i-~l~~~~~~~~~~~~~~~~~~~~hi---~f~v~d   78 (120)
                      ..|-.+++.+.+||+++|||++..+ .     ...+++..++. .+ .|-+.+...     ..+..+..|+   ++.|++
T Consensus        15 ~LrV~nr~~~~~FY~~vlG~kll~e-e-----~~~a~lg~~~~~~~L~lEEsp~~~-----~~~~~Glkh~a~i~i~vp~   83 (244)
T 3e0r_A           15 TLKANNRKLNETFYIETLGMKALLE-E-----SAFLSLGDQTGLEKLVLEEAPSMR-----TRKVEGRKKLARLIVKVEN   83 (244)
T ss_dssp             EEEESSHHHHHHHHTTTTCCEEEEE-C-----SSEEEEECTTCCEEEEEEECCTTT-----CBCCCSSCSEEEEEEEESS
T ss_pred             EEEECCHHHHHHHHHhccCcEEeec-c-----CcEEEeecCCCcceEEEEeCCCcc-----cccccccceeeeEEEEcCC
Confidence            3577899999999999999998532 2     23466666443 22 232223211     1112345677   599998


Q ss_pred             HHHHHHHHHHCCCeEE--ecCCCccEEEEeCCCCCeEEEEe
Q 033399           79 VSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~--~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .+++-.-|.. +..+.  .......++|+.||+||.|||+.
T Consensus        84 ~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiya  123 (244)
T 3e0r_A           84 PLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHA  123 (244)
T ss_dssp             HHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEEC
T ss_pred             HHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEE
Confidence            8877766654 66553  22223458999999999999986

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.07  E-value=4.8e-10  Score=81.16  Aligned_cols=111  Identities=12%  Similarity=0.044  Sum_probs=71.7

Q ss_pred             cchhhhhhhhhhccCceEeccCC-----CCCCCceeEEEEeC--CeEEEEEecCCCCCCCC-----CCCCCCCcceEEEE
Q 033399            8 KKREINKHQRFNLLGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG-----RPEHGGRDRHTCIA   75 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~-----~~~~~~~~~~l~~g--~~~i~l~~~~~~~~~~~-----~~~~~~~~~hi~f~   75 (120)
                      .|-+.+.+||.++|||++.....     .........++..+  ...|.|.+.........     .....++++||||.
T Consensus       195 ~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~~~~g~Gv~HiAf~  274 (381)
T 1t47_A          195 GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYGGAGVQHIALN  274 (381)
T ss_dssp             TCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHTSCEEEEEEEE
T ss_pred             ccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHHHhCCCCcceEEEe
Confidence            37888999999999999953210     11112234455543  24677766432111000     00112457999999


Q ss_pred             ECCHHHHHHHHHHCCCeEEecCCC---------------------ccEEEEeCCCCCeEEEEee
Q 033399           76 IRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv~~~~~~~g---------------------~~~~~~~DPdGn~iEl~~~  118 (120)
                      |+|+++++++|+++|+++...+..                     ...++-+||+|.+++|++.
T Consensus       275 vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          275 TGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             CSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             cCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence            999999999999999998663210                     1247779999999988764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.99  E-value=3.6e-10  Score=81.08  Aligned_cols=110  Identities=11%  Similarity=-0.031  Sum_probs=72.4

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM   84 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~   84 (120)
                      +.-.|.+.+++|| ++|||+++....+    .....+..++..+.+...+..........++.+..|+||+|+|++++++
T Consensus        18 ~~V~D~~~~~~fy-~~LGf~~~~~~~~----~~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~iaf~V~D~~~~~~   92 (357)
T 1cjx_A           18 FASPTPGTLEPIF-EIMGFTKVATHRS----KNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRVKDSQKAYN   92 (357)
T ss_dssp             EECSSTTSSHHHH-HHTTCEEEEEESS----SSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHH-HHCCCEEEEEeCC----eeEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEEEEeCCHHHHHH
Confidence            3457888999999 8999999632221    1223355566565554322110000000112357899999999999999


Q ss_pred             HHHHCCCeEEecCC--C-ccEEEEeCCCCCeEEEEeeC
Q 033399           85 ILDKAGISYTLSKS--G-RPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        85 ~l~~~Gv~~~~~~~--g-~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++++|+++...+.  | ...+.+++|+|..++|+++.
T Consensus        93 ~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           93 RALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             HHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             HHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            99999999866432  2 35567899999999998764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.99  E-value=9.5e-11  Score=84.09  Aligned_cols=111  Identities=13%  Similarity=0.019  Sum_probs=70.2

Q ss_pred             cchhhhhhhhhhccCceEeccC--CCCCCCceeEEEE--eCCeEEEEEec-CCCCCCCC---CCCCCCCcceEEEEECCH
Q 033399            8 KKREINKHQRFNLLGLEINEAR--PHDKLPYRGAWLW--VGAEMIHLMEL-PNPDPLSG---RPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~--~~~~~~~~~~~l~--~g~~~i~l~~~-~~~~~~~~---~~~~~~~~~hi~f~v~d~   79 (120)
                      .|.+.+.+||.++|||++....  +....+....++.  .++..|+|.+. ........   ......+.+|+||.|+|+
T Consensus       169 ~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~g~g~~HiAf~v~Di  248 (357)
T 1cjx_A          169 GRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGIQHVAFLTDDL  248 (357)
T ss_dssp             THHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBCCEEEEEESCH
T ss_pred             hhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcCCCCeeEEEEEcCCH
Confidence            3778889999999999985321  1100111112233  24457888765 22111000   000123579999999999


Q ss_pred             HHHHHHHHHCCCeEEe-cC-------------CCc--------cEEEEeC----CCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~-~~-------------~g~--------~~~~~~D----PdGn~iEl~~~  118 (120)
                      ++++++|+++|+++.. .+             .+.        ..++-+|    |+|++++|++.
T Consensus       249 ~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~  313 (357)
T 1cjx_A          249 VKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSE  313 (357)
T ss_dssp             HHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBC
T ss_pred             HHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEecc
Confidence            9999999999999866 32             111        1477788    88999999874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.94  E-value=8.8e-09  Score=75.53  Aligned_cols=114  Identities=11%  Similarity=-0.031  Sum_probs=75.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCC-C-CCCCceeEEEEeCCeEEEEEecCCCCC-----CCC----C------CCCCCC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARP-H-DKLPYRGAWLWVGAEMIHLMELPNPDP-----LSG----R------PEHGGR   68 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~-~-~~~~~~~~~l~~g~~~i~l~~~~~~~~-----~~~----~------~~~~~~   68 (120)
                      .-.|.+.+.+||.++|||++..... + +........+..|+..+.|.....+..     +..    .      ..++.+
T Consensus        38 ~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~~~~~~~~~hg~g  117 (418)
T 1sp8_A           38 WCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRFAADHGLA  117 (418)
T ss_dssp             ECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHHHHHHSSE
T ss_pred             EeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccchhHHHHHhhcCCe
Confidence            4567888999999999999863321 1 001233344666777888876432210     000    0      011235


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEecC----CCccEEEEeCCCCCeEEEEeeC
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~----~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ..|+||+|+|+++++++++++|+++...+    .+.+...+++|+|..++|+++.
T Consensus       118 v~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          118 VRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence            78999999999999999999999987632    2345667788888888887754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.90  E-value=1.6e-08  Score=73.63  Aligned_cols=114  Identities=11%  Similarity=0.042  Sum_probs=77.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC-C-CCCCceeEEEEeCCeEEEEEecCCCCC-CCC--CCCCCCCcceEEEEECCH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP-H-DKLPYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHGGRDRHTCIAIRDV   79 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~-~-~~~~~~~~~l~~g~~~i~l~~~~~~~~-~~~--~~~~~~~~~hi~f~v~d~   79 (120)
                      +.-.|.+.+.+||+++|||++..... + +........+..|+..+.|.....++. ...  ...++.+.+|+||+|+|+
T Consensus        17 i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~~iAf~VdDv   96 (393)
T 3isq_A           17 FWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDC   96 (393)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEEEEEECH
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEEEEEEEeCCH
Confidence            34567889999999999999964221 1 111122345667888888876432211 000  001223578999999999


Q ss_pred             HHHHHHHHHCCCeEEecC------CC-ccEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~~------~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++++++|+++..++      .| .+..-|++|.|+++.|++.
T Consensus        97 daa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           97 DYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             HHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            999999999999997642      23 4667789999999988874

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.66  E-value=1.1e-07  Score=69.87  Aligned_cols=110  Identities=14%  Similarity=0.092  Sum_probs=69.5

Q ss_pred             cchhhhhhhhhhccCceEeccCCCC-----CCCceeEEEEeC--CeEEEEEecCCC--CCCCC-C---CCCCCCcceEEE
Q 033399            8 KKREINKHQRFNLLGLEINEARPHD-----KLPYRGAWLWVG--AEMIHLMELPNP--DPLSG-R---PEHGGRDRHTCI   74 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~-----~~~~~~~~l~~g--~~~i~l~~~~~~--~~~~~-~---~~~~~~~~hi~f   74 (120)
                      .+.+.+..||.++|||++.......     ..+....|+..+  ...|.|.+....  ..... .   ...+.+++||||
T Consensus       211 ~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf  290 (424)
T 1sqd_A          211 PELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLAL  290 (424)
T ss_dssp             SCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEE
T ss_pred             CCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEE
Confidence            4678888999999999996322110     123344566654  347888775311  11000 0   012336799999


Q ss_pred             EECCHHHHHHHHHH----CCCeEEecC-----------CC-------------ccEEEEeCCCCCeEEEEe
Q 033399           75 AIRDVSKLKMILDK----AGISYTLSK-----------SG-------------RPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        75 ~v~d~d~~~~~l~~----~Gv~~~~~~-----------~g-------------~~~~~~~DPdGn~iEl~~  117 (120)
                      .|+|+++++++|++    +|+++...+           -+             ...++-+|.+|.+++|++
T Consensus       291 ~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift  361 (424)
T 1sqd_A          291 MSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFT  361 (424)
T ss_dssp             EESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEB
T ss_pred             EeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEEEc
Confidence            99999999999999    899987632           00             123566777777777765

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.65  E-value=5.8e-08  Score=76.73  Aligned_cols=115  Identities=17%  Similarity=0.146  Sum_probs=72.5

Q ss_pred             cceeeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC--eEEEEEecCCCCC-----------CC--CCCCCC
Q 033399            2 LYKYKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDP-----------LS--GRPEHG   66 (120)
Q Consensus         2 ~~~~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~-----------~~--~~~~~~   66 (120)
                      ||++-...-+.+..||.++|+|+.. ...+  .-.-..+|.-.+  ..+++.-.+....           ..  .....|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW   91 (941)
T 3opy_B           15 LFAPNISLLQASIDFYTNFLGFAIR-KNSN--QKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDW   91 (941)
T ss_dssp             EECCC-CC-HHHHHHHHHTTCCEEC-SSCS--CCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC--------
T ss_pred             EEeCCHHHHHHHHHHHHhhccceec-cccC--CcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccc
Confidence            5677777888899999999999984 2211  101122332222  2455532211110           00  001223


Q ss_pred             -CCcceEEEEECCHHHHHHHHHHCCCeEEecCC--CccEEEEeCCCCCeEEEEeeC
Q 033399           67 -GRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        67 -~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~--g~~~~~~~DPdGn~iEl~~~~  119 (120)
                       +...|++|.++|++++.+.|.+.+.++...+.  +...+|+.||+||+|+|.+.+
T Consensus        92 ~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           92 RSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             --CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             cccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence             34569999999999999999999999988665  788999999999999998753

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.65  E-value=9.7e-08  Score=70.02  Aligned_cols=89  Identities=11%  Similarity=0.009  Sum_probs=57.7

Q ss_pred             cchhhhhhhhhhccCceEeccCC--C---CCCCceeEEEEeCC--eEEEEEecCCC--CCCCC-CC---CCCCCcceEEE
Q 033399            8 KKREINKHQRFNLLGLEINEARP--H---DKLPYRGAWLWVGA--EMIHLMELPNP--DPLSG-RP---EHGGRDRHTCI   74 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~--~---~~~~~~~~~l~~g~--~~i~l~~~~~~--~~~~~-~~---~~~~~~~hi~f   74 (120)
                      .+.+.+..||.++|||++.....  +   ...+....|+..++  ..|.|.+....  ..... ..   ..+.+++||||
T Consensus       208 ~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf  287 (418)
T 1sp8_A          208 PELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMAL  287 (418)
T ss_dssp             SCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHTSSEEEEEEE
T ss_pred             CCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhccCCCCcCEEEE
Confidence            47788889999999999963211  1   00133456776643  46777764311  11000 00   11336799999


Q ss_pred             EECCHHHHHHHHHH----CCCeEEec
Q 033399           75 AIRDVSKLKMILDK----AGISYTLS   96 (120)
Q Consensus        75 ~v~d~d~~~~~l~~----~Gv~~~~~   96 (120)
                      .|+|+++++++|++    +|+++...
T Consensus       288 ~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          288 ASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             EETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             EeCCHHHHHHHHhhhhccCCeEEccC
Confidence            99999999999999    79998763

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.54  E-value=1.2e-07  Score=69.02  Aligned_cols=88  Identities=11%  Similarity=0.013  Sum_probs=56.0

Q ss_pred             cchhhhhhhhhhccCceEeccCC----CC-CCCceeEEEEeCC--eEEEEEecCCCCCCCC--C---CCCCCCcceEEEE
Q 033399            8 KKREINKHQRFNLLGLEINEARP----HD-KLPYRGAWLWVGA--EMIHLMELPNPDPLSG--R---PEHGGRDRHTCIA   75 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~----~~-~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~--~---~~~~~~~~hi~f~   75 (120)
                      .+.+....||.++|||+......    .. ..+.....+..++  .+|+|.+.........  .   ...+.+++||||.
T Consensus       184 ~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~fL~~~~G~Gi~HiA~~  263 (393)
T 3isq_A          184 QEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNGGAGVQHIALK  263 (393)
T ss_dssp             TCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHHHHHHTSSEEEEEEEE
T ss_pred             cHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHHHHHcCCCCcceEEEE
Confidence            34788899999999999853211    10 0122223344433  5788887532111000  0   0013458999999


Q ss_pred             ECCHHHHHHHHHHCCCeEEe
Q 033399           76 IRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      |+|+++++++|+++|+++..
T Consensus       264 ~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          264 TEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             ESCHHHHHHHHHHTTCCBCC
T ss_pred             cCCHHHHHHHHHHcCCccCC
Confidence            99999999999999999865

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.97  E-value=0.00025  Score=45.63  Aligned_cols=103  Identities=12%  Similarity=-0.035  Sum_probs=68.8

Q ss_pred             ceeeccchhhhhhhhhhcc-CceEec-cC-CC----C-CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 033399            3 YKYKRKKREINKHQRFNLL-GLEINE-AR-PH----D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   74 (120)
Q Consensus         3 ~~~~~~~~~~~~~fy~~vL-G~~~~~-~~-~~----~-~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f   74 (120)
                      |=|=.++++....||.++| |.++.. .+ ++    . ....-.+-|.+++..+.+.... +.    .+. ..+ ..+++
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p~----~~~-~~~-~sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PA----FRH-SEA-FSFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TT----CCC-CTT-EEEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-CC----cCC-CCc-eEEEE
Confidence            4455678899999999999 999862 12 11    0 1123345688888877776431 11    111 112 37888


Q ss_pred             EECC---HHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           75 AIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        75 ~v~d---~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .|+|   ++.+.++|.+.|.++.  ..|    .++||.|+.|.|...
T Consensus        83 ~~~d~~e~d~~~~~L~~~Gg~v~--~~G----~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           83 ATDDQAETDRLWNAIVDNGGEES--ACG----WCRDKWGISWQITPR  123 (163)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEC--STT----EEECTTSCEEEEEEH
T ss_pred             EeCCHHHHHHHHHHHHhCCCEEE--EEE----EEECCCCCEEEEEeE
Confidence            9987   6777899987788777  222    589999999998753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.05  E-value=0.00032  Score=48.71  Aligned_cols=75  Identities=9%  Similarity=0.184  Sum_probs=51.1

Q ss_pred             hccC-----ceEecc--CCCCCCCceeEEEEeCCeEEEEEecCCCC----------C--CCCC----CCCCCCcceEEEE
Q 033399           19 NLLG-----LEINEA--RPHDKLPYRGAWLWVGAEMIHLMELPNPD----------P--LSGR----PEHGGRDRHTCIA   75 (120)
Q Consensus        19 ~vLG-----~~~~~~--~~~~~~~~~~~~l~~g~~~i~l~~~~~~~----------~--~~~~----~~~~~~~~hi~f~   75 (120)
                      +.||     |++...  .|.  ++..+..+.+++.-|||+......          +  .-..    .....+..|+|+.
T Consensus        36 ~~lG~~~~~f~~~~GG~H~~--~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alr  113 (274)
T 3p8a_A           36 DRFSFPGDVIKLHSGGYHHK--YGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLH  113 (274)
T ss_dssp             GGCCCGGGSSCCEEEEEETT--TTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEE
T ss_pred             HHcCCccceEEeCCCccCCC--CCCEEEEEeeCCEEEEEEeecCcccccccccccCccchHHHHhhhhccCCCeEEEEEe
Confidence            5567     887531  232  566777788877889998854321          0  0000    0122467999999


Q ss_pred             ECCHHHHHHHHHHCCCeEEe
Q 033399           76 IRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      |+|+++..++|+++|+.+..
T Consensus       114 t~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A          114 TNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             CSCHHHHHHHHHTTTCEEEE
T ss_pred             cCCHHHHHHHHHHcCCCcCC
Confidence            99999999999999998754

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=96.08  E-value=0.023  Score=33.83  Aligned_cols=51  Identities=12%  Similarity=0.128  Sum_probs=38.7

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      .++|+++.|+|++++.+.....|.++...     ..+.+.+++.. ++..|||.+..
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            47899999999999999888889887542     23445566555 57889998753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=96.08  E-value=0.063  Score=32.59  Aligned_cols=52  Identities=12%  Similarity=0.203  Sum_probs=40.5

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecC----------CCccEEEEeCCCCCeEEEEee
Q 033399           67 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~----------~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+++|+++.|.|++++.+...+ .|.++....          .....+++.-++|..|+|.+.
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGE   80 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEEC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEec
Confidence            4578999999999999999987 899987620          123456777778899999875

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=95.74  E-value=0.043  Score=32.20  Aligned_cols=51  Identities=16%  Similarity=0.129  Sum_probs=39.5

Q ss_pred             cceEEEEECCHHHHHHHHH-HCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           69 DRHTCIAIRDVSKLKMILD-KAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++|+++.|.|++++.+... -.|.++...    ..+...+++.-++|..|+|.+.+
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            4 IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            6899999999999999885 568887653    23446677777778999998754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=95.73  E-value=0.081  Score=30.48  Aligned_cols=49  Identities=22%  Similarity=0.349  Sum_probs=37.7

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +.|+++.|.|++++.+...+ .|.++.... +....++..++|..+++.+.
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            4 IKHLNLTVADVVAAREFLEKYFGLTCSGTR-GNAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEE-TTTEEEEECTTCCEEEEEEC
T ss_pred             eEEEEEEeCCHHHHHHHHHHhCCCEEeccC-CCcEEEEEcCCCcEEEEEeC
Confidence            68999999999999998876 899887643 22456677777778888764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=95.69  E-value=0.044  Score=32.24  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=37.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+..++ .|.++...    ..+...+++.. ++..++|.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            468999999999999999988 89988652    22445555554 5678888774

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=95.53  E-value=0.032  Score=33.90  Aligned_cols=51  Identities=12%  Similarity=0.251  Sum_probs=39.2

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecC---------------CCccEEEEeCCCC-CeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---------------~g~~~~~~~DPdG-n~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+..++.|.++....               .+...+++.-++| ..|||.+.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            468999999999999998887899886421               2345677777776 78888763

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=95.53  E-value=0.045  Score=33.03  Aligned_cols=51  Identities=12%  Similarity=0.051  Sum_probs=39.8

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEec---C-CCccEEEEeCCCC-----CeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTLS---K-SGRPAIFTRDPDA-----NALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~---~-~g~~~~~~~DPdG-----n~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+... ..|.++...   . .+...+++..+++     ..|+|.+.
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            57899999999999999887 489988653   1 2445677777775     78999874

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=95.42  E-value=0.058  Score=33.30  Aligned_cols=52  Identities=17%  Similarity=0.148  Sum_probs=37.8

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec------------------CCCccEEEEeCCCCCeEEEEeeC
Q 033399           67 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS------------------KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~------------------~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      .+++|+++.|.|++++.+...+ .|.++...                  ..+.+.+++.. .+..|||.+..
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~   88 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPD   88 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEEC
Confidence            3579999999999999999976 89876431                  12345555544 47789998753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=95.37  E-value=0.061  Score=33.44  Aligned_cols=50  Identities=12%  Similarity=0.107  Sum_probs=38.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++.|+++.|.|++++.+..++ .|.++...    ..+.+.+++.. ++..|||.+.
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~   62 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEP   62 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEE
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeE
Confidence            578999999999999999988 89988652    23445666654 4678888875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=94.90  E-value=0.13  Score=30.03  Aligned_cols=49  Identities=12%  Similarity=0.020  Sum_probs=36.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---C-CCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~-~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++|+++.|.|++++.+...+ .|.++...   . .+...+++..+ +..++|.+
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-TEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-CeEEEEEe
Confidence            468999999999999999965 89998652   2 23345556554 44888877

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=94.85  E-value=0.26  Score=28.98  Aligned_cols=50  Identities=16%  Similarity=0.122  Sum_probs=37.0

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEec---CCC-ccEEEEeCCC---CCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLS---KSG-RPAIFTRDPD---ANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~~g-~~~~~~~DPd---Gn~iEl~~~  118 (120)
                      +.|+++.|.|++++.+..++ .|.++...   +.+ ...+++.-++   +..|+|.+.
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            58999999999999999876 89988653   222 3445565444   688998763

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=94.58  E-value=0.24  Score=30.00  Aligned_cols=52  Identities=13%  Similarity=0.121  Sum_probs=37.4

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEE-eCCCCCeEEEEee
Q 033399           67 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFT-RDPDANALEFTQV  118 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~-~DPdGn~iEl~~~  118 (120)
                      .++.|+++.|.|++++.+...+ .|.++..........++ .+..+..|+|.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            4578999999999999999865 89998775322223333 3445788888764

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=94.53  E-value=0.13  Score=29.90  Aligned_cols=50  Identities=12%  Similarity=0.034  Sum_probs=36.1

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .++|+++.|.|++++.+...+ .|.++...    ..+...+++.-+++ .|+|.+.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            468999999999999999976 89988652    12333444555555 8888763

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=94.10  E-value=0.12  Score=30.80  Aligned_cols=49  Identities=6%  Similarity=-0.029  Sum_probs=36.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCC-C---ccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G---RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~-g---~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++.|+++.|.|++++.+...+ .|.++..... .   ...+++.  ++..|+|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP--GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT--TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc--CCCEEEEEeC
Confidence            368999999999999998866 7998865321 1   2334444  6788999875

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=93.94  E-value=0.15  Score=30.62  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=35.5

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .+.|+++.|.|++++.+..++.|.++.........+.+.-++|..|+|.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            36899999999999999888788887653211123334445677788765

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=93.85  E-value=0.37  Score=30.35  Aligned_cols=44  Identities=14%  Similarity=0.025  Sum_probs=33.1

Q ss_pred             CCcceEEEEECCHHHHHHHH-HHCCCeEEec----CCCccEEEEeCCCC
Q 033399           67 GRDRHTCIAIRDVSKLKMIL-DKAGISYTLS----KSGRPAIFTRDPDA  110 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l-~~~Gv~~~~~----~~g~~~~~~~DPdG  110 (120)
                      -.++|+++.|.|++++.+.. +-.|.++...    ..+...+|+..+++
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~   81 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDK   81 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCc
Confidence            35789999999999999988 5689988652    23356667776664

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=93.48  E-value=0.35  Score=29.34  Aligned_cols=47  Identities=21%  Similarity=0.219  Sum_probs=34.1

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+++.|.|++++.+...+ .|.++.....+.  .++.- +|..|+|.+
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~--~~l~~-~~~~l~l~~   70 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR--KALIF-GAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCe--EEEEe-CCeEEEEec
Confidence            468999999999999999988 899987753322  22322 346676665

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=93.27  E-value=0.41  Score=27.96  Aligned_cols=47  Identities=15%  Similarity=0.212  Sum_probs=33.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+++.|.|++++.+...+ .|.++.....+  .+++.- +|..|+|.+
T Consensus        10 ~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A           10 HLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG--RIALEF-GHQKINLHQ   57 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT--EEEEEE-TTEEEEEEE
T ss_pred             ccCEEEEEECCHHHHHHHHHHccCceEEEecCC--eEEEEc-CCEEEEEEc
Confidence            578999999999999998887 89998775322  222222 345666654

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=93.10  E-value=0.55  Score=28.19  Aligned_cols=51  Identities=20%  Similarity=0.202  Sum_probs=37.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---CC-CccEEEEeCCC---CCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD---ANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~~-g~~~~~~~DPd---Gn~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+...+ .|.++...   +. +...+++.-++   +..|+|.+.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            468999999999999998875 89988653   22 23445666554   588998875

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=92.93  E-value=0.55  Score=29.53  Aligned_cols=51  Identities=20%  Similarity=0.190  Sum_probs=37.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---CC-CccEEEEeCCC------------------CCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD------------------ANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~---~~-g~~~~~~~DPd------------------Gn~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+..++ .|.++...   .. +...+++..++                  +..|||.+.
T Consensus        31 ~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           31 LLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            568999999999999999876 89988653   11 23345555553                  578998764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=92.73  E-value=0.7  Score=27.29  Aligned_cols=48  Identities=2%  Similarity=-0.085  Sum_probs=34.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ...|+++.|.|++++.+..++ .|.++.....  ..+.+...+|..+.|.+
T Consensus        13 ~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           13 TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             eeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            578999999999999988875 7887755322  23334555667777764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=92.36  E-value=1.3  Score=29.87  Aligned_cols=78  Identities=15%  Similarity=0.131  Sum_probs=50.9

Q ss_pred             eeEEEEeC-CeEEEEEecCCCCCCCCC---CCCCCCcceEEEEECCHHHHHHHHHHCCCeEEec-CCCccEEEEeCCCCC
Q 033399           37 RGAWLWVG-AEMIHLMELPNPDPLSGR---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDAN  111 (120)
Q Consensus        37 ~~~~l~~g-~~~i~l~~~~~~~~~~~~---~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn  111 (120)
                      ...++.-. +..++|++.+...+....   +...-++.|+.+.|+|++++.+.+...|.+.... ....+..+.-| +|.
T Consensus       123 ~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~v~d~~~~~~fl~~LG~~~~~~~~~~~~f~~~G~-~g~  201 (252)
T 3pkv_A          123 YSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPAGLNFIGD-QDL  201 (252)
T ss_dssp             EEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEECSCHHHHHHHHHHTTCCCCGGGCCTTSCEEEEE-TTE
T ss_pred             EEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEEeCCHHHHHHHHHHcCCCcccCCCChheEEEcCC-CcE
Confidence            33445444 458999885432211111   1112357899999999999999998899988764 23455566677 777


Q ss_pred             eEEE
Q 033399          112 ALEF  115 (120)
Q Consensus       112 ~iEl  115 (120)
                      .|-+
T Consensus       202 ~i~v  205 (252)
T 3pkv_A          202 FLLL  205 (252)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7766

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=92.32  E-value=0.31  Score=28.98  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=33.9

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec-CCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .+.|+++.|.|++++.+-..+.|.++... ......+++.-.+|..++|..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            46899999999999998887789888765 221123444424566777754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=92.19  E-value=0.64  Score=27.06  Aligned_cols=50  Identities=12%  Similarity=0.092  Sum_probs=35.8

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEec---CCCccEEEEeCCCC-CeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTLS---KSGRPAIFTRDPDA-NALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~~---~~g~~~~~~~DPdG-n~iEl~~  117 (120)
                      .+.|+++.|.|++++.+... ..|.++...   ..+...+.+..++| ..|++.+
T Consensus        13 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~   67 (133)
T 4hc5_A           13 YVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGL   67 (133)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEEC
T ss_pred             ceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEec
Confidence            57899999999999999885 589988663   13444555555544 4577765

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=92.04  E-value=0.88  Score=27.52  Aligned_cols=48  Identities=15%  Similarity=0.094  Sum_probs=35.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+.|+.+.|.|++++.+...+ .|.++.... + ..+++.- +|..|+|.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~-~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN-P-EIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC-S-SEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC-C-CEEEEEc-CCEEEEEEec
Confidence            468999999999999998876 898876543 2 3444544 5778888763

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=92.00  E-value=1.1  Score=27.05  Aligned_cols=48  Identities=17%  Similarity=0.111  Sum_probs=35.1

Q ss_pred             CcceEEEEECCHHHHHHHH----HHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l----~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+.|+++.|.|++++.+..    ...|.++....... ..|+.  ++..|+|.+.
T Consensus        20 ~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~-~~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           20 MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG-KSYKH--GKTYLVFVQT   71 (146)
T ss_dssp             SCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTE-EEEEE--TTEEEEEEEC
T ss_pred             ceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCC-ceEec--CCeEEEEEEc
Confidence            5789999999999998877    66899987642222 23555  5678888764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=91.75  E-value=0.73  Score=27.85  Aligned_cols=30  Identities=20%  Similarity=0.359  Sum_probs=26.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecC
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK   97 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~   97 (120)
                      ++.|+++.|.|++++.+..++ .|.++....
T Consensus        27 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~   57 (147)
T 3zw5_A           27 RLDHIVMTVKSIKDTTMFYSKILGMEVMTFK   57 (147)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEecC
Confidence            578999999999999999887 899987643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=91.73  E-value=2.1  Score=29.04  Aligned_cols=47  Identities=11%  Similarity=0.134  Sum_probs=35.3

Q ss_pred             CcceEEEEEC--CHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIR--DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~--d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +...+-|.|+  |+.++.++|++.|.-+..   ....+.+.||.|+.|=|.+
T Consensus       195 gLe~l~~~v~~~dl~~l~~~L~~~g~~idk---k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          195 DLSMLKFLVNELDIASLRQKFESTEYFIPK---SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SEEEEEEEESSCCHHHHHHHTTTSCEECCT---TCCEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEeCHHHHHHHHHHHHhCCceEcc---cCCEEEEECCCCCEEEEEE
Confidence            4578888886  588999999998773322   2357788999999887654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=91.70  E-value=0.62  Score=28.24  Aligned_cols=48  Identities=8%  Similarity=-0.001  Sum_probs=34.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .+.|+++.|.|++++.+...+ .|.++.....+  ..++.-++|..|+|.+
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~   73 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWS   73 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEe
Confidence            468999999999999998876 78887553222  3344544577788765

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=90.92  E-value=0.83  Score=27.86  Aligned_cols=48  Identities=6%  Similarity=-0.077  Sum_probs=35.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+.+.|.|++++.+-..+ .|.++.....  ..+++.-++|..++|.+
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~   54 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWA   54 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEec
Confidence            468999999999999988876 8888765432  24455555777777754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=90.01  E-value=1.4  Score=27.01  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=33.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+++.|.|++++.+...+ .|.++.....+ ..+++.. ++..+++.+
T Consensus         8 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-~~~~~~~-g~~~~~l~~   56 (160)
T 3r4q_A            8 AIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-QLVFFKC-GRQMLLLFD   56 (160)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-TEEEEEE-TTEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-cEEEEeC-CCEEEEEEe
Confidence            578999999999999998887 89998774322 2344443 345566553

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=89.72  E-value=1.2  Score=26.42  Aligned_cols=50  Identities=14%  Similarity=0.107  Sum_probs=33.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCcc-----EEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRP-----AIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~-----~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++.|.|++++.+...+ .|.++.....+..     ..++. .+|..|++.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~g~~~l~l~~~   59 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQG   59 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEE-ECCEEEEEEeC
Confidence            368999999999999998865 8998866321111     11332 24667887653

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=89.01  E-value=1.3  Score=31.49  Aligned_cols=46  Identities=13%  Similarity=-0.045  Sum_probs=35.2

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEe----cC----------CCccEEEEeCCCCCeE
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTL----SK----------SGRPAIFTRDPDANAL  113 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~----~~----------~g~~~~~~~DPdGn~i  113 (120)
                      ..+|+..+|.|++++.+.|+++|+++..    ++          .-...+.|.|.+|..+
T Consensus       235 ~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~~v  294 (340)
T 3iuz_A          235 AFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGETV  294 (340)
T ss_dssp             SCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSCEE
T ss_pred             ccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCcee
Confidence            5689999999999999999999999854    22          1234466788887543

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=88.72  E-value=1.5  Score=25.62  Aligned_cols=28  Identities=14%  Similarity=0.205  Sum_probs=24.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      ++.|+++.|.|++++.+...+ .|.++..
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   32 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIY   32 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEee
Confidence            468999999999999998876 8988765

>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=88.45  E-value=2.4  Score=25.90  Aligned_cols=49  Identities=14%  Similarity=0.153  Sum_probs=38.4

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEe--c----------CCC----ccEEEEeCCCCCeEEEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTL--S----------KSG----RPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~--~----------~~g----~~~~~~~DPdGn~iEl~~  117 (120)
                      ..-+++.+++.+++.+.+++.++++..  .          ..+    ....|+.||+|.++....
T Consensus        64 v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~  128 (161)
T 3drn_A           64 VVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYN  128 (161)
T ss_dssp             EEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEE
T ss_pred             CEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEe
Confidence            567888999999999999999988643  1          134    577999999999987754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=88.19  E-value=2.5  Score=24.86  Aligned_cols=47  Identities=11%  Similarity=0.082  Sum_probs=32.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+.+.|.|++++.+-..+ .|.++......  ..|+.- +|..|+|.+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~l~l~~   51 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ--GAYLEL-GSLWLCLSR   51 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEEE-TTEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCC--ceEEec-CCEEEEEEe
Confidence            368999999999999998887 89988764211  234432 345666654

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=87.89  E-value=2.7  Score=24.79  Aligned_cols=50  Identities=16%  Similarity=0.174  Sum_probs=36.1

Q ss_pred             cceEEEEECCHHHHHHHH-HHCCCeEEec--C-CCccEEEEeCCCC-CeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMIL-DKAGISYTLS--K-SGRPAIFTRDPDA-NALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l-~~~Gv~~~~~--~-~g~~~~~~~DPdG-n~iEl~~~  118 (120)
                      ..|+++.|.|++++.+.. +..|.++...  . .+...+++..+++ ..||+.+.
T Consensus        12 ~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   66 (139)
T 1twu_A           12 QIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQY   66 (139)
T ss_dssp             CEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEE
T ss_pred             eeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeec
Confidence            468999999999999988 4679988653  1 3345677777764 45787653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=87.86  E-value=2.2  Score=25.28  Aligned_cols=48  Identities=10%  Similarity=0.079  Sum_probs=33.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++.|+++.|.|++++.+...+ .|.++......  ..|+.- +|..|+|.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~-~~~~l~l~~~   52 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT--GAYLTC-GDLWVCLSYD   52 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT--EEEEEE-TTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC--cEEEEE-CCEEEEEEEC
Confidence            468999999999999999876 89988764221  234443 4556777653

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=87.41  E-value=2.2  Score=25.63  Aligned_cols=29  Identities=14%  Similarity=0.291  Sum_probs=24.1

Q ss_pred             CCcceEEEEECCHHHHHHHHHHCCCeEEe
Q 033399           67 GRDRHTCIAIRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      .+..||++.|.|+++..+-..+.|.....
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~lg~~~~~   36 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGTLGFEFNP   36 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHTTCEECG
T ss_pred             ccEEEEEEEeCCHHHHHHHHHHhCCCcce
Confidence            35689999999999999988888776654

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=86.70  E-value=2.6  Score=25.57  Aligned_cols=43  Identities=16%  Similarity=0.147  Sum_probs=30.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec--CCCccEEEEeCCCC
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS--KSGRPAIFTRDPDA  110 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~--~~g~~~~~~~DPdG  110 (120)
                      .+.|+++.|+|++++.+-..+ .|.++...  ..+.+.+.+..|++
T Consensus        26 ri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~~~~~~   71 (155)
T 4g6x_A           26 RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEA   71 (155)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTC
T ss_pred             EEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceEEEEeccCC
Confidence            368999999999999998854 89988652  23344444554543

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=86.15  E-value=3.5  Score=24.04  Aligned_cols=29  Identities=17%  Similarity=0.114  Sum_probs=24.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      .+.|+++.|.|++++.+-..+ .|.++...
T Consensus         9 ~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            9 DVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             SEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            478999999999999999865 89988553

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=86.01  E-value=2  Score=24.83  Aligned_cols=49  Identities=8%  Similarity=0.061  Sum_probs=33.6

Q ss_pred             CcceEEEEE--CCHHHHHHHHHH-CCCeEEecCC---CccEEEEeCCCCCeEEEEe
Q 033399           68 RDRHTCIAI--RDVSKLKMILDK-AGISYTLSKS---GRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v--~d~d~~~~~l~~-~Gv~~~~~~~---g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.|+++.|  .|++++.+...+ .|.++.....   +....++.- ++..++|.+
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~   64 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKC-GNQEIHIGV   64 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEE-TTEEEEEEE
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEe-CCEEEEEEe
Confidence            468999999  899999999865 8998876421   112234443 356677765

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=84.95  E-value=4  Score=23.61  Aligned_cols=46  Identities=13%  Similarity=0.196  Sum_probs=32.4

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           70 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .|+.+.|.|++++.+..++.|.++.....  ..+++.. ++..|+|.+.
T Consensus         5 ~~~~l~v~D~~~a~~FY~~LG~~~~~~~~--~~~~~~~-~~~~l~l~~~   50 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYERLGFGIVFRDA--GWMILQR-GDLMLEFFAH   50 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCEEEEECS--SEEEEEE-TTEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCEEEecCC--CEEEEEe-CCEEEEEEeC
Confidence            58999999999999988889998876422  2333433 3566777653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=84.30  E-value=3.2  Score=24.56  Aligned_cols=28  Identities=14%  Similarity=0.106  Sum_probs=24.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      .+.|+++.|.|++++.+...+ .|.++..
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   36 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIE   36 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECG
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeec
Confidence            468999999999999998876 8998864

>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A

Probab=83.64  E-value=2.7  Score=25.57  Aligned_cols=48  Identities=13%  Similarity=0.208  Sum_probs=36.3

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEe--c-------CCC---------------ccEEEEeCCCCCeEEEE
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTL--S-------KSG---------------RPAIFTRDPDANALEFT  116 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~--~-------~~g---------------~~~~~~~DPdGn~iEl~  116 (120)
                      ..-+++.+++.+.+.+.+++.++.+..  .       ..+               ....|+.||+|+++...
T Consensus        70 ~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~  141 (163)
T 3gkn_A           70 AKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW  141 (163)
T ss_dssp             CEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE
T ss_pred             CEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE
Confidence            567889999999888888888876532  1       011               45689999999998776

>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}

Probab=83.24  E-value=2.1  Score=26.87  Aligned_cols=48  Identities=15%  Similarity=0.170  Sum_probs=36.1

Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEe--c-------CCC---------------ccEEEEeCCCCCeEEEE
Q 033399           69 DRHTCIAIRDVSKLKMILDKAGISYTL--S-------KSG---------------RPAIFTRDPDANALEFT  116 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~~Gv~~~~--~-------~~g---------------~~~~~~~DPdGn~iEl~  116 (120)
                      ..-+++.+++.+.+.+.+++.++++..  .       ..+               ....|+.||+|+++...
T Consensus        86 ~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~  157 (179)
T 3ixr_A           86 ATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW  157 (179)
T ss_dssp             EEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE
Confidence            567888999988888888888877632  1       011               24589999999998776

>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0

Probab=80.21  E-value=6.5  Score=24.06  Aligned_cols=49  Identities=18%  Similarity=0.111  Sum_probs=36.7

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCC-eEEe--cC--------CC---------ccEEEEeCCCCCeEEEE
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGI-SYTL--SK--------SG---------RPAIFTRDPDANALEFT  116 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv-~~~~--~~--------~g---------~~~~~~~DPdGn~iEl~  116 (120)
                      +..-+++.+++.+++.+.+++.|+ .+..  ..        .|         ....|+.||+|+++...
T Consensus        77 ~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~  145 (166)
T 3p7x_A           77 EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE  145 (166)
T ss_dssp             TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE
T ss_pred             CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE
Confidence            457789999999998888888888 5532  11        11         46789999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	7e-05
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-04
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	0.002
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.003

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 37.7 bits (86), Expect = 7e-05
 Identities = 19/99 (19%), Positives = 32/99 (32%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
             LG+++       +  Y   +L  G EM   +     +      +H     H  I + D
Sbjct: 23  ERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVED 82

Query: 79  VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 117
           V +L   + K  +            F  DPD   +E   
Sbjct: 83  VKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 36.9 bits (84), Expect = 1e-04
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 7/109 (6%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWV---GAEMIHLMELPNPDPLSGRPEHGGRDR--HTC 73
           N+LGL   +   +   P      +    G+    L     P             R     
Sbjct: 26  NVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLV 85

Query: 74  IAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVDG 120
            +   +   K   +K  + ++   + + RPA+   D +   L     +G
Sbjct: 86  PSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG 134

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 33.5 bits (75), Expect = 0.002
 Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 5/104 (4%)

Query: 19  NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 78
            +LG+++     + +  Y  A++  G E    +     +    + E G    H  +++ +
Sbjct: 22  KVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN 81

Query: 79  VSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEFTQ 117
            ++    + + G + T              F  DPD   +E  +
Sbjct: 82  AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 33.0 bits (74), Expect = 0.003
 Identities = 12/113 (10%), Positives = 25/113 (22%), Gaps = 11/113 (9%)

Query: 10  REINKHQRF--NLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG 67
           R++ +   F  + LG                A +      + +  + +            
Sbjct: 13  RDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQAWVW 66

Query: 68  RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 117
                 +       +      A          +P       RDP  N + F  
Sbjct: 67  VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.83
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.82
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.81
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.78
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.77
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.76
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.75
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.74
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.74
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.74
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.74
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.73
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.73
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.73
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.72
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.71
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.7
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.68
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.61
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.61
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.61
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.6
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.58
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.57
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.57
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.55
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.5
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.44
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.22
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.13
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.7
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.69
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.59
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.58
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.42
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.11
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.07
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	96.07
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.05
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.44
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	95.26
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	94.98
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	93.98
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	93.59
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	93.08
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	92.3
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	91.79
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	91.64
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	91.45
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.42
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	91.17
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	91.08
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	90.8
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	89.65
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	89.26
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	87.94
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	87.14
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	85.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	84.44
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	83.88
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	83.86
d1st9a_	137	Thiol-disulfide oxidoreductase ResA {Bacillus subt	83.51
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	82.9
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	82.3
d1lu4a_	134	Soluble secreted antigen MPT53 {Mycobacterium tube	81.23
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	80.79

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=2.8e-20  Score=112.74  Aligned_cols=102  Identities=16%  Similarity=0.117  Sum_probs=78.4

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|-+.+.+||.++||+++....+      .-+++..|+..+.|.+.... +  . +. .+...|++|.|+|+++++++|
T Consensus        10 V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~-~--~-~~-~~~~~~~~f~v~D~d~~~~~l   78 (115)
T d2i7ra1          10 VSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLV-P--L-EN-FQSGIIIHIEVEDVDQNYKRL   78 (115)
T ss_dssp             CSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSS-S--C-CC-CCSCEEEEEECSCHHHHHHHH
T ss_pred             ECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccC-C--C-CC-CCcceEEEEEECCHHHHHHHH
Confidence            357788899999999999953211      23678889988888754321 1  1 11 122368999999999999999


Q ss_pred             HHCCCeEEe----cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           87 DKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        87 ~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+++..    .++|.+.+||+|||||+|||+|.+
T Consensus        79 ~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          79 NELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             HHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             HhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence            999999876    357889999999999999999874

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=2.6e-20  Score=115.87  Aligned_cols=108  Identities=12%  Similarity=0.077  Sum_probs=76.5

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSKL   82 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~~   82 (120)
                      .|.+.+.+||.++|||++.. +.....++..+++..++.  .+.+...+...+    +...+..+|++|.|+|   ++++
T Consensus        18 ~Dle~s~~FY~~vLG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~hlaf~v~~~~dv~~~   92 (137)
T d1twua_          18 GQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYVPNAVELAAI   92 (137)
T ss_dssp             SCHHHHHHHHTTTSCCCEEE-EEEEETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEECCCHHHHHHH
T ss_pred             CCHHHHHHHHHhccCCceee-eeccccceeEEEecCCCCceeeeccccccccc----ccccccCceEEEEeCCHHHHHHH
Confidence            47788999999999999953 221113455667777654  344443332211    1122346899999976   7788


Q ss_pred             HHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeCC
Q 033399           83 KMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++|+++|+++..++   ++.+.+||+|||||.|||.+..|
T Consensus        93 ~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          93 TSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence            999999999988742   56789999999999999998654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.81  E-value=2e-19  Score=112.52  Aligned_cols=113  Identities=12%  Similarity=0.093  Sum_probs=78.6

Q ss_pred             ccchhhhhhhhhhccCceEeccCCC-C----------CCCceeEEEEeCC--eEEEEEecCCCCCC---CCCCCCCCCcc
Q 033399            7 RKKREINKHQRFNLLGLEINEARPH-D----------KLPYRGAWLWVGA--EMIHLMELPNPDPL---SGRPEHGGRDR   70 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~-~----------~~~~~~~~l~~g~--~~i~l~~~~~~~~~---~~~~~~~~~~~   70 (120)
                      -+|-+.+.+||++ |||++....+. +          ......+++...+  ..++|++.......   ...+....+.+
T Consensus        17 v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   95 (149)
T d1ss4a_          17 VESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPVNALGYL   95 (149)
T ss_dssp             CSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCCSSSBEEE
T ss_pred             eCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccCCCCccee
Confidence            4688899999998 99998632211 0          1112334555543  47788764322211   11112223568


Q ss_pred             eEEEEECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           71 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        71 hi~f~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      |+||.|+|+++++++|+++|+++...    .++.+.+|++|||||+|||+|..|
T Consensus        96 hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~~  149 (149)
T d1ss4a_          96 RVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEELG  149 (149)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEECC
T ss_pred             EEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEccC
Confidence            99999999999999999999999653    466788999999999999999877

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.78  E-value=1.7e-18  Score=103.30  Aligned_cols=99  Identities=13%  Similarity=0.142  Sum_probs=69.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      ...|-+.+++||.++|||++....+     . ...+..++....++......+     . .....|++|.|+|+++++++
T Consensus         9 ~v~d~~~a~~FY~~~lG~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~dvd~~~~~   76 (111)
T d2pjsa1           9 ATPEPARAQAFYGDILGMPVAMDHG-----W-IVTHASPLEAHAQVSFAREGG-----S-GTDVPDLSIEVDNFDEVHAR   76 (111)
T ss_dssp             ECSCGGGGHHHHTTTTCCCEEEECS-----S-EEEEEEEEEEEEEEEEESSSB-----T-TBCCCSEEEEESCHHHHHHH
T ss_pred             EeCCHHHHHHHHHHhhCCceeeccc-----c-eeEeccccccceeeecccccC-----C-CCceeEEEEEecCHHHHHHH
Confidence            3568889999999999999963221     1 123333333323322211111     1 11246999999999999999


Q ss_pred             HHHCCCeEEe----cCCCccEEEEeCCCCCeEEEE
Q 033399           86 LDKAGISYTL----SKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        86 l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      |+++|+++..    .++|.+.+|++|||||+|||+
T Consensus        77 l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          77 ILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999754    367889999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=1.5e-18  Score=108.31  Aligned_cols=111  Identities=17%  Similarity=0.189  Sum_probs=75.1

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEE-EEeC--C----eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAW-LWVG--A----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~-l~~g--~----~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~   77 (120)
                      ...+|-+.+++||.++|||++....+.  ...+..+ +..+  .    ..+.+...+...+  ..+. .++.+|+||.|+
T Consensus        12 l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-~~~~~Hiaf~v~   86 (144)
T d1zswa1          12 MVTKNANENNHFYKNVLGLRRVKMTVN--QDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--TYRG-TNAITRIGLLVP   86 (144)
T ss_dssp             EEESCHHHHHHHHHTTTCCEEEEEEEE--TTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--CBCC-BSEEEEEEEEES
T ss_pred             EEeCCHHHHHHHHHHHhCCeeEeeecc--ccCCceeEEEecccccceeeEEeecccccccC--CccC-CCceeEEEEecC
Confidence            356788999999999999999633222  1222222 2222  1    2344444332211  1111 235689999999


Q ss_pred             C---HHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           78 D---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        78 d---~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      |   ++++.++|+++|+.+...  .++.+++||+|||||.|||++..|
T Consensus        87 ~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          87 SEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             CchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            8   778899999999988552  467889999999999999988654

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=2.8e-18  Score=105.28  Aligned_cols=105  Identities=13%  Similarity=0.111  Sum_probs=76.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCC-CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DVSKL   82 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~-~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~d~~   82 (120)
                      .-.|.+.+..||+++|||++...... ........++..++..+++.....+       . .....|+||.|+  |++++
T Consensus        11 ~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~f~v~~~dv~~~   82 (130)
T d1r9ca_          11 IVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL-------A-ERSYNHIAFKIDDADFDRY   82 (130)
T ss_dssp             EESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC-------S-SCCSCEEEEECCGGGHHHH
T ss_pred             EeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeecccccc-------c-ccceeeeeecccHHHHHHH
Confidence            35678899999999999999643222 1123455678888877777654321       1 123579999875  79999


Q ss_pred             HHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           83 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|+++|+++...    .++.+.+||+|||||+|||.+.
T Consensus        83 ~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          83 AERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             HHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEEC
Confidence            99999999998653    3567899999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.76  E-value=1.2e-17  Score=103.76  Aligned_cols=104  Identities=23%  Similarity=0.280  Sum_probs=76.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--CCHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKLK   83 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v--~d~d~~~   83 (120)
                      .-+|.+.+++||.++|||++.. ...     ...++..++..+.+........   .+.......|++|.+  +|+++++
T Consensus        11 ~v~d~~~~~~FY~~vLG~~~~~-~~~-----~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~~~~~d~~~~~   81 (140)
T d1npba_          11 AVSDLQKSVTFWHELLGLTLHA-RWN-----TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAEEDFEPLS   81 (140)
T ss_dssp             EESCHHHHHHHHHTTSCCEEEE-EET-----TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEECCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHhCCEEEE-Eec-----cccccccccccceeeccccccc---CCCcCCccceeeeechHHHHHHHH
Confidence            4578899999999999999953 211     2356777777666644322211   111223467999988  5899999


Q ss_pred             HHHHHCCCeEEec-CCCccEEEEeCCCCCeEEEEee
Q 033399           84 MILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        84 ~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+++|+++... .++.+++||+|||||.|||.+.
T Consensus        82 ~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          82 QRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            9999999999774 4667899999999999999763

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.75  E-value=2.4e-18  Score=110.80  Aligned_cols=105  Identities=12%  Similarity=0.191  Sum_probs=70.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   78 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---   78 (120)
                      .+-.|.+.+++||.++|||++. .+.+    ....+...++.   .+.+.....+   ...+. .++.+||||.|+|   
T Consensus        18 L~V~Dle~s~~FY~~vLG~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~l~HiAf~V~~~~~   88 (170)
T d1zswa2          18 LTVRRLDKMASTLTEIFGYTEV-SRND----QEAIFQSIKGEAFGEIVVKYLDGP---TEKPG-RGSIHHLAIRVKNDAE   88 (170)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEE-EECS----SEEEEESSTTCSTTCEEEEECCSS---BCBCC-BTCEEEEEEEESSHHH
T ss_pred             EEeCCHHHHHHHHHHHhCCEEE-eecC----ceEEEEeccCccceEEEecccccc---ccccC-ccccceEEEEeCChHH
Confidence            3457889999999999999996 3322    12233333222   2222222211   11122 2357899999986   


Q ss_pred             HHHHHHHHHHCCCeEEec--CCCccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~--~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...  ....+++||+|||||+|||+..
T Consensus        89 l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          89 LAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             HHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            778899999999998652  4567899999999999999873

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=5.1e-17  Score=100.15  Aligned_cols=101  Identities=21%  Similarity=0.274  Sum_probs=75.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--CCHHHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKL   82 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v--~d~d~~   82 (120)
                      ...+|-+.+++||.++||+++....+      ...++..++..++.........    +.  ....|++|.+  +|++++
T Consensus        10 l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~h~~~~~~~~dl~~~   77 (134)
T d1nkia_          10 LAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGG----PA--ADYTHYAFGIAAADFARF   77 (134)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCC----CC--SSSCEEEEEECHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeeccccc----cc--cccccchhccccchHHHH
Confidence            45678899999999999999963322      2467888887777765432211    11  2346777666  589999


Q ss_pred             HHHHHHCCCeEEec-CCCccEEEEeCCCCCeEEEEe
Q 033399           83 KMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        83 ~~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++|+++|+++... .++.+.+||+|||||.|||.+
T Consensus        78 ~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          78 AAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             HHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEES
T ss_pred             HHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEE
Confidence            99999999999775 455788999999999999976

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=5.3e-18  Score=103.63  Aligned_cols=111  Identities=15%  Similarity=0.173  Sum_probs=72.1

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-e---EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-E---MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~---~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      -+-+|.+.+.+||+++|||++....+.........++.... .   .......... .  . ........|+++.+++++
T Consensus         8 i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~~   83 (135)
T d1f9za_           8 LRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV-D--K-YELGTAYGHIALSVDNAA   83 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC-C--C-CCCCSSEEEEEEECSCHH
T ss_pred             EEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc-c--c-ccccccceeeccchHHHH
Confidence            35678899999999999999963222211222222333322 1   1111111111 0  1 111234589999999999


Q ss_pred             HHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           81 KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      ++.++++++|+.+...     ..+.+.+||+|||||+|||+|.+
T Consensus        84 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          84 EACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             HHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             HHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            9999999999998662     24578899999999999999853

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.74  E-value=3.6e-17  Score=99.09  Aligned_cols=99  Identities=20%  Similarity=0.208  Sum_probs=75.0

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|-+.+++||++ |||++....+      ..+++..++..+.+.......+     .  ....|+++.|+|++++++++
T Consensus        10 v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~d~~~~~~~~   75 (120)
T d1ecsa_          10 SRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDP-----L--ASWFSCCLRLDDLAEFYRQC   75 (120)
T ss_dssp             ESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCG-----G--GCCCEEEEEESCHHHHHHHH
T ss_pred             eCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceecccccccccccc-----C--CCCcEEEEEECCHHHHHHHH
Confidence            3678889999987 9999963221      2356677777777766543221     1  12368999999999999999


Q ss_pred             HHCCCeEEe-----------cCCCccEEEEeCCCCCeEEEEeeC
Q 033399           87 DKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        87 ~~~Gv~~~~-----------~~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+.+..           .++|.+.+||+|||||+|||.|.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          76 KSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             hhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999988632           357889999999999999999964

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.7e-17  Score=105.05  Aligned_cols=114  Identities=14%  Similarity=0.145  Sum_probs=73.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-------------------eEEEEEecCCCC-----CCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNPD-----PLS   60 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-------------------~~i~l~~~~~~~-----~~~   60 (120)
                      .+-+|-+.+.+||.++|||++.............++...+.                   ....+.......     ...
T Consensus        29 l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (176)
T d1qipa_          29 LRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH  108 (176)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCB
T ss_pred             EEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccccCcCcc
Confidence            46788899999999999999853222111233333333221                   112222211111     111


Q ss_pred             CCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCccEEEEeCCCCCeEEEEee
Q 033399           61 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        61 ~~~~~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .......+..|+||.|+|+++++++|+++|+++...+   .+...+||+|||||.|||+|.
T Consensus       109 ~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~  169 (176)
T d1qipa_         109 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNP  169 (176)
T ss_dssp             CSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECT
T ss_pred             CCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeC
Confidence            1111123568999999999999999999999998842   345678999999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=1.4e-17  Score=99.70  Aligned_cols=98  Identities=12%  Similarity=0.084  Sum_probs=69.5

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---HHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---VSK   81 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---~d~   81 (120)
                      .-.|-+.+++||.++|||++. .++.   + ...++..++ ..+.++..+...        .++..|++|.|+|   +++
T Consensus        10 ~v~Dl~~a~~FY~~~lG~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v~~~~~v~~   76 (113)
T d1xqaa_          10 TVADVVAAREFLEKYFGLTCS-GTRG---N-AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             EESCHHHHHHHHHHHHCCEEE-EEET---T-TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEECSSHHHHHH
T ss_pred             EeCCHHHHHHHHHHhhCCEEE-Eeec---C-cceeeeecceeeeeeeeeeccc--------ccccceeeeeeccccchhh
Confidence            456788999999999999995 3332   1 123333333 366665543211        1235799999987   677


Q ss_pred             HHHHHHHCCCeEEec-CCCccEEEEeCCCCCeEEEE
Q 033399           82 LKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        82 ~~~~l~~~Gv~~~~~-~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++++|+++|+++... ..+.+++||+|||||.|||.
T Consensus        77 ~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          77 INQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             hhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEE
Confidence            899999999998664 34568899999999999995

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.73  E-value=3.7e-18  Score=105.98  Aligned_cols=115  Identities=11%  Similarity=0.125  Sum_probs=77.3

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEE------eCCeEEEEEecCCCCCCC----CCCCCCCCcceEEE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLS----GRPEHGGRDRHTCI   74 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~------~g~~~i~l~~~~~~~~~~----~~~~~~~~~~hi~f   74 (120)
                      ..-+|.+.+.+||+++||++..........+....+..      .++..+++++...+....    .......+.+|+||
T Consensus        13 i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~g~~Hia~   92 (145)
T d1jc4a_          13 YACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAW   92 (145)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCCcceEEEE
Confidence            34578889999999999999853211111222222222      245688888754332210    01112345799999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec-----CCCccEEEE--eCCCCCeEEEEeeC
Q 033399           75 AIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  119 (120)
Q Consensus        75 ~v~d~d~~~~~l~~~Gv~~~~~-----~~g~~~~~~--~DPdGn~iEl~~~~  119 (120)
                      .|+|+++++++|+++|+++...     ..|.+.+|+  +||+|++|||+|.+
T Consensus        93 ~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          93 RVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             ECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             ecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            9999999999999999998642     345566666  79999999999965

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.73  E-value=1.4e-17  Score=100.95  Aligned_cols=99  Identities=17%  Similarity=0.123  Sum_probs=76.6

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI   85 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~   85 (120)
                      ..+|.+.+++||.++|||++.. +++     ..+++..++.++++.......+        ....|++|.|+|+++++++
T Consensus        12 ~v~Dl~~s~~FY~~vLG~~~~~-~~~-----~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~~~   77 (122)
T d1jifa_          12 TAVDVPANVSFWVDTLGFEKDF-GDR-----DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALHEE   77 (122)
T ss_dssp             EESSHHHHHHHHHHTTCCEEEE-ECS-----SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHHHH
T ss_pred             EcCCHHHHHHHHHhhhCCceEe-cCC-----ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHHHH
Confidence            4578899999999999999963 322     2467888888999876543211        1236899999999999999


Q ss_pred             HHHCCCeEEe-----------cCCCccEEEEeCCCCCeEEEEee
Q 033399           86 LDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        86 l~~~Gv~~~~-----------~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++....           ..++.+++||+|||||+|||.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          78 WARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999877632           13567899999999999999874

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.72  E-value=5.1e-17  Score=100.20  Aligned_cols=95  Identities=16%  Similarity=0.098  Sum_probs=72.4

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~d   80 (120)
                      +-.|-+.+++||+++|||++. .++.     ..+|+..++.  .+.+...+           ..+..|++|.|.   |++
T Consensus        11 ~V~Dl~~s~~FY~~vLG~~~~-~~~~-----~~~~l~~~~~~~~l~l~~~~-----------~~~~~h~~f~v~~~~dl~   73 (131)
T d1lgta1          11 AVSDVAAWRSFLTQKLGLMEA-GTTD-----NGDLFRIDSRAWRIAVQQGE-----------VDDLAFAGYEVADAAGLA   73 (131)
T ss_dssp             EESCHHHHHHHHHHTTCCEEE-EEET-----TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEEESSHHHHH
T ss_pred             EeCCHHHHHHHHHHhhCCcee-ecCC-----cceEEeecCCceEEEEecCC-----------CCCceEEEEEEccHHHHH
Confidence            457889999999999999995 3322     3578887764  45554321           124689999996   477


Q ss_pred             HHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++.++|+++|+++...       ..+.+.+||+|||||.|||+.
T Consensus        74 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          74 QMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             HHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            8899999999999763       245688999999999999975

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=1.7e-17  Score=101.60  Aligned_cols=108  Identities=15%  Similarity=0.163  Sum_probs=73.2

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEe--CCe---EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWV--GAE---MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~--g~~---~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      +-+|.+.+++||.++|||++......  ......++..  ...   ............   .........|+++.+++++
T Consensus        10 ~V~Dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   84 (139)
T d2c21a1          10 RVGDLDRSIKFYTERLGMKVLRKWDV--PEDKYTLVFLGYGPEMSSTVLELTYNYGVT---SYKHDEAYGHIAIGVEDVK   84 (139)
T ss_dssp             ECSCHHHHHHHHHHTTCCEEEEEEEE--GGGTEEEEEEESSCTTTSCEEEEEEETTCC---CCCCCSSEEEEEEEESCHH
T ss_pred             EeCCHHHHHHHHHHHhCCEeeccccc--cccceeeeeecccccccccccccccccCcc---cccCCCccceeeeehhhHH
Confidence            45788999999999999999632211  1112233332  221   111111111111   1111234578999999999


Q ss_pred             HHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++...++++...+.+.+++||+|||||+|||++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          85 ELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             HHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             HHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999888889999999999999999984

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.71  E-value=4.7e-17  Score=103.72  Aligned_cols=103  Identities=15%  Similarity=0.165  Sum_probs=69.8

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS---   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d---   80 (120)
                      .-+|.+.+++||.++|||++....+.........|+..+..  ...+...+         . .++.+|++|.+.+++   
T Consensus        12 ~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~h~~~~~~~~~~~~   81 (162)
T d1mpya2          12 YGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP---------E-KGRLHHVSFHLETWEDLL   81 (162)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS---------S-SSEEEEEEEECSCHHHHH
T ss_pred             ECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccC---------C-CCccceeEEEEeeehhhh
Confidence            45788999999999999999532222222333344454443  22222111         1 124689999998765   


Q ss_pred             HHHHHHHHCCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++|+++|+++...     ..+.+++||+|||||.|||+..
T Consensus        82 ~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          82 RAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             HHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             hHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            7789999999998652     2346899999999999999863

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.70  E-value=5e-17  Score=99.45  Aligned_cols=106  Identities=18%  Similarity=0.147  Sum_probs=70.4

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCC-eEEEEEecCC---CCCCCCCCCCCCCcceEEEEECC---H
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPN---PDPLSGRPEHGGRDRHTCIAIRD---V   79 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~i~l~~~~~---~~~~~~~~~~~~~~~hi~f~v~d---~   79 (120)
                      -+|-+.+++||++ |||.+......    ...+.+..++ ..+.+.....   ..+. ..+...+...|++|.|++   +
T Consensus        10 V~D~~~s~~FY~~-Lg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~v~~~~~l   83 (128)
T d1klla_          10 VEDMAKSMEFYRK-MGVEIPAEADS----APHTEAVLDGGIRLAWDTVETVRSYDPE-WQAPTGGHRFAIAFEFPDTASV   83 (128)
T ss_dssp             ESCHHHHHHHHHH-TTCCCCTTGGG----CSEEEEECGGGCEEEEEEHHHHHHHCTT-CCCCCSSCSCEEEEECSSHHHH
T ss_pred             cCCHHHHHHHHHH-hCCcccccccc----ccceeeeccceeeeeecccccccccCCC-CCCCccccceeEeeeeccchhh
Confidence            4678889999966 89998533322    1223344443 3555543211   0111 111112334799999987   6


Q ss_pred             HHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEee
Q 033399           80 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++++++|+++|+++...    ++|.+.+||+|||||+|||+++
T Consensus        84 ~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          84 DKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEE
T ss_pred             HHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEec
Confidence            77899999999998662    5788999999999999999975

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.68  E-value=6.3e-17  Score=99.95  Aligned_cols=96  Identities=15%  Similarity=0.107  Sum_probs=72.7

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CH
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DV   79 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---d~   79 (120)
                      .+-.|.+.+++||.++|||++. .+..     ..+|+..++.  .+.+...+           ..+..|++|.|+   |+
T Consensus        10 i~v~Dl~~s~~FY~~vLG~~~~-~~~~-----~~~~l~~~~~~~~l~~~~~~-----------~~~~~h~~f~v~~~~dl   72 (132)
T d1kw3b1          10 FAVKDVPAWDHFLTKSVGLMAA-GSAG-----DAALYRADQRAWRIAVQPGE-----------LDDLAYAGLEVDDAAAL   72 (132)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEE-EEET-----TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEECSSHHHH
T ss_pred             EEeCCHHHHHHHHHHHhCCcee-cccc-----ceeeeeeeecceeeeeeccC-----------CCCceEEEEEeccHHHH
Confidence            4567889999999999999995 3322     3578888764  34443221           124689999996   57


Q ss_pred             HHHHHHHHHCCCeEEec-------CCCccEEEEeCCCCCeEEEEe
Q 033399           80 SKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        80 d~~~~~l~~~Gv~~~~~-------~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +++.++|+++|+++...       ....+++||+|||||.|||+.
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          73 ERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             HHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            88999999999999863       134578999999999999975

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.61  E-value=3.3e-15  Score=89.66  Aligned_cols=97  Identities=10%  Similarity=0.032  Sum_probs=71.2

Q ss_pred             ccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            7 RKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      -+|-+.+++||.++|||++.. +..     ..+++..++..+++.......+        ....++.+.+++++...+++
T Consensus        12 v~D~~~s~~FY~~~LG~~~~~-~~~-----~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~   77 (120)
T d1xrka_          12 ARDVAEAVEFWTDRLGFSRVF-VED-----DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDELYAEW   77 (120)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEE-ECS-----SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHHHHHHH
T ss_pred             ECCHHHHHHHHHHhhCCeEEE-ECC-----CeeEEecccceeeccccccccC--------CCCceEEEeeccHHHHHHHH
Confidence            367888999999999999963 221     2467788888888876543211        12468999999999999988


Q ss_pred             HHCCCeEEe--------c---CCCccEEEEeCCCCCeEEEEe
Q 033399           87 DKAGISYTL--------S---KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        87 ~~~Gv~~~~--------~---~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      .++......        .   ..+.+++||+|||||.|||++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          78 SEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             TTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            877655422        1   133478999999999999986

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=9.3e-15  Score=89.99  Aligned_cols=109  Identities=10%  Similarity=-0.074  Sum_probs=74.6

Q ss_pred             cchhhhhhhhhhccCceEeccCCCC-------CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHD-------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~-------~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      .+.+.+.+||.++||+++....+..       ......+-+.+++..+.+........... +...+...|+++.|+|++
T Consensus        16 ~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~v~d~~   94 (135)
T d1xy7a_          16 QKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFST-AKSEGSGVTFLLGTKDAE   94 (135)
T ss_dssp             TCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCC-CCTTSCCCEEEEECSCHH
T ss_pred             CCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeecccccccccccc-CCCCCcceEEEEeecCcc
Confidence            4677888999999999985322110       01112345677887777765321111111 111223359999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEe
Q 033399           81 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      ++++++.++|+++..+    ++|.+.++|+||+||.++|.|
T Consensus        95 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          95 AAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             HHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            9999999999999874    478899999999999999976

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.61  E-value=6.5e-15  Score=92.00  Aligned_cols=97  Identities=13%  Similarity=0.104  Sum_probs=68.8

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---   77 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~---   77 (120)
                      ..-+|.+.+++||.++|||++. .+..     ...++...+.    .+.+...+           ..+.+|++|.+.   
T Consensus        22 l~v~Dl~~s~~FY~~~lG~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~h~~~~~~~~~   84 (146)
T d1f1ua1          22 IVVTDLAKSREFYVDVLGLHVT-EEDE-----NTIYLRSLEEFIHHNLVLRQGP-----------IAAVAAFAYRVKSPA   84 (146)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEE-EECS-----SEEEEECTTCCSSCSEEEEECS-----------SCEEEEEEEEESSHH
T ss_pred             EEeCCHHHHHHHHHhccCcEEE-eecC-----CceeeecccccccceeeccccC-----------CCCCceeeEeeccch
Confidence            3457889999999999999996 3322     2345544322    12221111           124689999996   


Q ss_pred             CHHHHHHHHHHCCCeEEec----CC-CccEEEEeCCCCCeEEEEee
Q 033399           78 DVSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~~----~~-g~~~~~~~DPdGn~iEl~~~  118 (120)
                      |++++.++|+++|+++...    .. +.+++||+|||||.|||+..
T Consensus        85 dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          85 EVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             HHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             hHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            6889999999999998652    23 35889999999999999863

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.60  E-value=2.6e-15  Score=95.15  Aligned_cols=104  Identities=15%  Similarity=0.142  Sum_probs=67.7

Q ss_pred             eeeccchhhhhhhhhhccCceEeccC--CC-CCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 033399            4 KYKRKKREINKHQRFNLLGLEINEAR--PH-DKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   78 (120)
Q Consensus         4 ~~~~~~~~~~~~fy~~vLG~~~~~~~--~~-~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d   78 (120)
                      ..+-+|.+.+++||+++|||+++...  +. ........|+..+..  .+.+...+         . ..+++|+||+|++
T Consensus        15 ~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~---------~-~~gl~Hiaf~v~~   84 (156)
T d1kw3b2          15 VRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP---------I-PKRIHHFMLQANT   84 (156)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS---------C-SSSEEEEEEEBSS
T ss_pred             EEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCC---------C-CCceeEEEEECCC
Confidence            34668899999999999999985211  00 001112234554433  23332211         1 1257999999986


Q ss_pred             HH---HHHHHHHHCCCeEEec----CCCccEEEEeCCCCC-eEEEEe
Q 033399           79 VS---KLKMILDKAGISYTLS----KSGRPAIFTRDPDAN-ALEFTQ  117 (120)
Q Consensus        79 ~d---~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn-~iEl~~  117 (120)
                      ++   +++++|+++|+.+...    .....++|++||||| .+|+..
T Consensus        85 ~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          85 IDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             HHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             HHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            55   5789999999876442    244689999999998 589864

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-15  Score=94.52  Aligned_cols=115  Identities=12%  Similarity=0.051  Sum_probs=78.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCC--CCCCCceeEEEEeCCeEEEEEecCCCCCCC-CC--CCCCCCcceEEEEECCHH
Q 033399            6 KRKKREINKHQRFNLLGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLS-GR--PEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~-~~--~~~~~~~~hi~f~v~d~d   80 (120)
                      .-+|.+.+.+||.++|||++.....  ..........+..++..+.|+......... ..  .....+.+|+||.|+|++
T Consensus        18 ~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hiaf~V~di~   97 (149)
T d1sqia1          18 WVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCE   97 (149)
T ss_dssp             ECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEEEEEECHH
T ss_pred             EcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEEEEEeccHH
Confidence            3478888999999999999963211  111222223355567788887644322110 00  011235789999999999


Q ss_pred             HHHHHHHHCCCeEEec------CCC-ccEEEEeCCCCCeEEEEeeCC
Q 033399           81 KLKMILDKAGISYTLS------KSG-RPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~~------~~g-~~~~~~~DPdGn~iEl~~~~~  120 (120)
                      +++++|+++|+++..+      ..| .+.++++.|+|..+||+|+.|
T Consensus        98 ~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          98 HIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             HHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             HHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            9999999999998663      223 367889999999999999764

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.57  E-value=5.1e-15  Score=94.05  Aligned_cols=114  Identities=12%  Similarity=0.082  Sum_probs=78.7

Q ss_pred             eeccchhhhhhhhhhccCceEeccCC--CCCCCceeEEEEeCCeEEEEEecCCCCCCCC-----C-CCCCCCcceEEEEE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSG-----R-PEHGGRDRHTCIAI   76 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~-----~-~~~~~~~~hi~f~v   76 (120)
                      +.-.|.+.+.+||+++|||++.....  ..........+..++..+.|.+.........     . .....+..||||.|
T Consensus        13 i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~~hiaf~V   92 (163)
T d1t47a1          13 FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEV   92 (163)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCceEEEEEee
Confidence            34578899999999999999963221  1112223344566777888877543221000     0 01123578999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec------CCC-ccEEEEeCCCCCeEEEEee
Q 033399           77 RDVSKLKMILDKAGISYTLS------KSG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        77 ~d~d~~~~~l~~~Gv~~~~~------~~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|+++++++|+++|+++...      ..| .+.+++++|+|..++|+++
T Consensus        93 dDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier  141 (163)
T d1t47a1          93 PDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  141 (163)
T ss_dssp             SCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEec
Confidence            99999999999999998663      122 5789999999998888885

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.57  E-value=3.8e-15  Score=96.06  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=67.3

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH---
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS---   80 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d---   80 (120)
                      .-+|-+.++.|| ++|||+++............+|+..++.  .+.+...+           ..+.+|++|.|.+++   
T Consensus        12 ~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~H~~f~~~~~~~v~   79 (176)
T d1f1ua2          12 VTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHHVAFATHEKHNII   79 (176)
T ss_dssp             EESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEEEEEECSSHHHHH
T ss_pred             EcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc-----------CCCccceeEEeccchhHH
Confidence            456788889999 7999999632222112334456665543  34443322           124689999998655   


Q ss_pred             HHHHHHHHCCCeEEe----c---CCCccEEEEeCCCCCeEEEEee
Q 033399           81 KLKMILDKAGISYTL----S---KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        81 ~~~~~l~~~Gv~~~~----~---~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      .+.++|+++|+....    .   .....++||+|||||+|||+..
T Consensus        80 ~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          80 QICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             HHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            566799999986422    1   2345789999999999999863

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.55  E-value=1.1e-15  Score=95.14  Aligned_cols=97  Identities=15%  Similarity=0.083  Sum_probs=63.7

Q ss_pred             eccchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEE---CC
Q 033399            6 KRKKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAI---RD   78 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v---~d   78 (120)
                      .-.|-+.+++||.++|||++.. +..   .. ..+....+.    .+.+...+         .  .+..|++|.+   +|
T Consensus        14 ~v~D~~~s~~FY~~vLG~~~~~-~~~---~~-~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~d   77 (145)
T d1mpya1          14 RVLDMSKALEHYVELLGLIEMD-RDD---QG-RVYLKAWTEVDKFSLVLREAD---------E--PGMDFMGFKVVDEDA   77 (145)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-ECT---TS-CEEEECTTCCBSCSEEEEECS---------S--CEEEEEEEEESCHHH
T ss_pred             EeCCHHHHHHHHHHhhCCEEEE-eec---cC-ccceecccccceeeccccccC---------c--ccceeeeeeehhHHH
Confidence            4467889999999999999963 322   11 122222221    12221111         0  1235666666   47


Q ss_pred             HHHHHHHHHHCCCeEEec----CCC-ccEEEEeCCCCCeEEEEee
Q 033399           79 VSKLKMILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        79 ~d~~~~~l~~~Gv~~~~~----~~g-~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++++++|+++|+++...    ..+ .+++||+|||||.|||++.
T Consensus        78 l~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          78 LRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             HHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             HHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            889999999999998652    233 4899999999999999863

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=1.6e-13  Score=87.21  Aligned_cols=116  Identities=13%  Similarity=0.013  Sum_probs=76.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCCCCCCceeEE--EEeCCeEEEEEecCCCCCC-------C--CCCC---------
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPHDKLPYRGAW--LWVGAEMIHLMELPNPDPL-------S--GRPE---------   64 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~--l~~g~~~i~l~~~~~~~~~-------~--~~~~---------   64 (120)
                      +.-.|.+.+.+||+++|||++...............  +..++..+.+.........       .  ..+.         
T Consensus        18 i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (167)
T d1sqda1          18 FWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSF   97 (167)
T ss_dssp             EECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccCCcchHHHh
Confidence            456788899999999999998533221111111122  3334444444322111000       0  0000         


Q ss_pred             ---CCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeCC
Q 033399           65 ---HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  120 (120)
Q Consensus        65 ---~~~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~~  120 (120)
                         +..+.+||||.|+|+++++++|+++|+++..+    ..+.+.++++.+++.+++|++++|
T Consensus        98 ~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          98 FSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             HHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             hhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence               12357999999999999999999999998774    367788999999999999999876

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.44  E-value=9.6e-13  Score=84.16  Aligned_cols=115  Identities=10%  Similarity=-0.051  Sum_probs=75.6

Q ss_pred             eeccchhhhhhhhhhccCceEeccCCC--CCCCceeEEEEeCCeEEEEEecCCCC-C----CCCCC----------CCCC
Q 033399            5 YKRKKREINKHQRFNLLGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPD-P----LSGRP----------EHGG   67 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~i~l~~~~~~~-~----~~~~~----------~~~~   67 (120)
                      +.-+|.+.+++||.++|||++......  .........+..++..+.+....... .    .....          .+..
T Consensus        19 i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   98 (172)
T d1sp8a1          19 LWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRFAADHGL   98 (172)
T ss_dssp             EECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHHHHHHSS
T ss_pred             EEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhhhhhhcCC
Confidence            345788999999999999999632221  11111111233455555554322111 0    00000          0123


Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec----CCCccEEEEeCCCCCeEEEEeeC
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~----~~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +..||||.|+|+++++++|+++|+++...    ..|.+.++++-|.+.+++|+++.
T Consensus        99 Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          99 AVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence            57899999999999999999999998764    36778899999988899999865

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.22  E-value=3e-10  Score=69.68  Aligned_cols=109  Identities=11%  Similarity=-0.083  Sum_probs=71.9

Q ss_pred             eeccchhhhhhhhhhccCceEeccC--CCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceE
Q 033399            5 YKRKKREINKHQRFNLLGLEINEAR--PHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   72 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~~~~~~~--~~~~----------~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi   72 (120)
                      +=.++.+...+||.++||+++....  .+..          .....+-+.+++..+.+.......+     ...+...++
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~-----~~~~~~~~~   83 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP-----YEGIKGCSI   83 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC-----CCCCCSEEE
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCccc-----ccCCCcEEE
Confidence            4466788899999999999985311  1100          0111234666776665544322111     112234689


Q ss_pred             EEEECCHH--HHHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           73 CIAIRDVS--KLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        73 ~f~v~d~d--~~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++.+++.|  +.+.+..++|.++..    .+||.+..+|+||+|+.++|...
T Consensus        84 ~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          84 SLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             EEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            99998755  446677788999876    36888999999999999999753

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.13  E-value=2.4e-11  Score=76.16  Aligned_cols=106  Identities=10%  Similarity=-0.097  Sum_probs=68.3

Q ss_pred             cchhhhhhhhhhccCceEeccCCCCCCCceeEEEEeCCeEEEEEecCCCCCCC-CCCCCCCCcceEEEEECCHHHHHHHH
Q 033399            8 KKREINKHQRFNLLGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS-GRPEHGGRDRHTCIAIRDVSKLKMIL   86 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~i~l~~~~~~~~~~-~~~~~~~~~~hi~f~v~d~d~~~~~l   86 (120)
                      .+.+....||.. |||+.+....+    .....+.-|+..+.+ ..+..++.. ....+..+.+|+||+|+|++++++++
T Consensus        18 ~d~~~~~~~~~~-lGF~~~~~~~~----~~~~l~~~G~i~ll~-~~~~~s~~~~~~~~hg~gv~hiaf~V~D~~~a~~~a   91 (150)
T d1cjxa1          18 PTPGTLEPIFEI-MGFTKVATHRS----KNVHLYRQGEINLIL-NNEPNSIASYFAAEHGPSVCGMAFRVKDSQKAYNRA   91 (150)
T ss_dssp             SSTTSSHHHHHH-TTCEEEEEESS----SSEEEEEETTEEEEE-ECCSSSHHHHHHHHHSSEEEEEEEEESCHHHHHHHH
T ss_pred             CCHHHHHHHHHH-hCCEEEecccc----eEEEEEecCcEEEEe-cCCCCCHhHhHHhhCCCceEEEEEEeCCHHHHHHHH
Confidence            456667778865 99999632221    223334445543322 222111100 00122346799999999999999999


Q ss_pred             HHCCCeEEecC---CCccEEEEeCCCCCeEEEEeeC
Q 033399           87 DKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  119 (120)
Q Consensus        87 ~~~Gv~~~~~~---~g~~~~~~~DPdGn~iEl~~~~  119 (120)
                      +++|+++...+   .......+++|+|.+|.|+++.
T Consensus        92 ~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          92 LELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             HHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             HHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcC
Confidence            99999987642   3355677899999999998864

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.70  E-value=1.1e-06  Score=53.31  Aligned_cols=104  Identities=10%  Similarity=-0.019  Sum_probs=66.5

Q ss_pred             cchhhhhhhhhhccCceEecc--C-CC---CC-CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 033399            8 KKREINKHQRFNLLGLEINEA--R-PH---DK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   80 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~--~-~~---~~-~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~d   80 (120)
                      ++.+...+||.++||.+....  + ++   .. ...-.+-|.+++..+.+.......+    .. .+...++++.+++.|
T Consensus        15 ~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~----~~-~~~~~s~~l~~~~~d   89 (134)
T d1u7ia_          15 VQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA----FD-FTPAFSFFVDCESNA   89 (134)
T ss_dssp             SCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS----CC-CCTTEEEEEECCCHH
T ss_pred             cCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCC----CC-CCCceEEEEEeccHH
Confidence            367778899999999875321  1 11   11 1223456788888888765432211    11 122357888888755


Q ss_pred             H---HHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEe
Q 033399           81 K---LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQ  117 (120)
Q Consensus        81 ~---~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~  117 (120)
                      +   +++.| +.|.++..    .++|.+...|+||.|+.+.|.-
T Consensus        90 ~~~~~~~~l-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          90 QIERLAEAL-SDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             HHHHHHHHH-HTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHH-hcCCEEecCcccccccceEEEEECCCCCEEEEEc
Confidence            4   44555 56777755    3688899999999999999853

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.69  E-value=1e-08  Score=66.85  Aligned_cols=90  Identities=13%  Similarity=0.009  Sum_probs=54.5

Q ss_pred             eccchhhhhhhhhhccCceEeccC--CCCCCCceeEEEEeCC--eEEEEEecCCCCCCC-CC---CCCCCCcceEEEEEC
Q 033399            6 KRKKREINKHQRFNLLGLEINEAR--PHDKLPYRGAWLWVGA--EMIHLMELPNPDPLS-GR---PEHGGRDRHTCIAIR   77 (120)
Q Consensus         6 ~~~~~~~~~~fy~~vLG~~~~~~~--~~~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~-~~---~~~~~~~~hi~f~v~   77 (120)
                      +..+.+....||+++|||+.....  +..........+...+  ..+.+...+...... ..   ...+.+.+||||.|+
T Consensus        14 ~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~GiqHIAf~vd   93 (203)
T d1cjxa2          14 YRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGIQHVAFLTD   93 (203)
T ss_dssp             CTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBCCEEEEEES
T ss_pred             ChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCCCceEEEEeC
Confidence            345778889999999999996321  1111122233344443  234443322211100 00   012346799999999


Q ss_pred             CHHHHHHHHHHCCCeEEe
Q 033399           78 DVSKLKMILDKAGISYTL   95 (120)
Q Consensus        78 d~d~~~~~l~~~Gv~~~~   95 (120)
                      |+.+++++|+++|+++..
T Consensus        94 DI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          94 DLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             CHHHHHHHHHHTTCCBCC
T ss_pred             CHHHHHHHHHhcCCcccc
Confidence            999999999999999854

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.59  E-value=2.9e-07  Score=59.69  Aligned_cols=89  Identities=10%  Similarity=0.015  Sum_probs=53.0

Q ss_pred             ccchhhhhhhhhhccCceEeccCC--C--CC-CCceeEEEEeCCe--EEEEEecCCCCCCCC--C--C-CCCCCcceEEE
Q 033399            7 RKKREINKHQRFNLLGLEINEARP--H--DK-LPYRGAWLWVGAE--MIHLMELPNPDPLSG--R--P-EHGGRDRHTCI   74 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~--~--~~-~~~~~~~l~~g~~--~i~l~~~~~~~~~~~--~--~-~~~~~~~hi~f   74 (120)
                      ..+.+....||+++|||+......  +  .. ....+.-+..++.  .+.+.+.......+.  .  . ..+++++||||
T Consensus        16 ~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~~~g~GiQHIAl   95 (199)
T d1t47a2          16 LGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYGGAGVQHIAL   95 (199)
T ss_dssp             TTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHTSCEEEEEEE
T ss_pred             hhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhhcCCCcceEEEE
Confidence            456677889999999999853211  1  01 1122222333332  444433221111000  0  0 12346899999


Q ss_pred             EECCHHHHHHHHHHCCCeEEe
Q 033399           75 AIRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        75 ~v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      .|+|+.++.++|+++|+++..
T Consensus        96 ~tdDI~~av~~L~~~G~~fL~  116 (199)
T d1t47a2          96 NTGDIVETVRTMRAAGVQFLD  116 (199)
T ss_dssp             ECSCHHHHHHHHHHTTCCBCC
T ss_pred             EcCCHHHHHHHHHHcCCCCCC
Confidence            999999999999999999865

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.58  E-value=3.1e-08  Score=65.51  Aligned_cols=85  Identities=11%  Similarity=-0.013  Sum_probs=51.3

Q ss_pred             cchhhhhhhhhhccCceEeccCCC-----CCCCceeEEEEeCC--eEEEEEecCCCCCCCCC------CCCCCCcceEEE
Q 033399            8 KKREINKHQRFNLLGLEINEARPH-----DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGR------PEHGGRDRHTCI   74 (120)
Q Consensus         8 ~~~~~~~~fy~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~--~~i~l~~~~~~~~~~~~------~~~~~~~~hi~f   74 (120)
                      .+.+...+||.++|||+.....+.     .........+..++  ..+.+.+...+......      ...+.+++||||
T Consensus        18 ~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~~g~GiqHIAf   97 (224)
T d1sp8a2          18 PELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMAL   97 (224)
T ss_dssp             SCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHTSSEEEEEEE
T ss_pred             cCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhccCCCceeEEE
Confidence            367888899999999997532111     01122223344433  46677664332211100      011246899999


Q ss_pred             EECCHHHHHHHHHHCCCe
Q 033399           75 AIRDVSKLKMILDKAGIS   92 (120)
Q Consensus        75 ~v~d~d~~~~~l~~~Gv~   92 (120)
                      .|+|++++++.|+++|+.
T Consensus        98 ~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          98 ASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             EETTHHHHHHHHHTSGGG
T ss_pred             EeCCHHHHHHHHHhcccc
Confidence            999999999999988644

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=2.2e-07  Score=60.69  Aligned_cols=89  Identities=12%  Similarity=0.036  Sum_probs=52.4

Q ss_pred             ccchhhhhhhhhhccCceEeccCC--C--C-CCCceeEEEEeCCe--EEEEEecCCCCCCCC--C---CCCCCCcceEEE
Q 033399            7 RKKREINKHQRFNLLGLEINEARP--H--D-KLPYRGAWLWVGAE--MIHLMELPNPDPLSG--R---PEHGGRDRHTCI   74 (120)
Q Consensus         7 ~~~~~~~~~fy~~vLG~~~~~~~~--~--~-~~~~~~~~l~~g~~--~i~l~~~~~~~~~~~--~---~~~~~~~~hi~f   74 (120)
                      ....+....||.++|||+......  +  . .....+..+..++.  .+.|.+.........  .   ...+.+++||||
T Consensus        34 ~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~~~~G~GiQHIAf  113 (210)
T d1sqia2          34 DQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHIAL  113 (210)
T ss_dssp             TTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHHHHTSSEEEEEEE
T ss_pred             chhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHhhcCCCCeeEEEE
Confidence            345677889999999999853211  1  0 01122334555443  444443221111000  0   012346899999


Q ss_pred             EECCHHHHHHHHHHCCCeEEe
Q 033399           75 AIRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        75 ~v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      .|+|+.++.++|+++|+++..
T Consensus       114 ~t~DI~~av~~L~~~Gv~fL~  134 (210)
T d1sqia2         114 RTEDIITTIRHLRERGMEFLA  134 (210)
T ss_dssp             EESCHHHHHHHHHHHTCCBCC
T ss_pred             EcCCHHHHHHHHHHcCCCCCC
Confidence            999999999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.11  E-value=6e-05  Score=45.07  Aligned_cols=106  Identities=8%  Similarity=-0.002  Sum_probs=66.1

Q ss_pred             ceeeccchhhhhhhhhhccCceEecc--C-CC----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 033399            3 YKYKRKKREINKHQRFNLLGLEINEA--R-PH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   75 (120)
Q Consensus         3 ~~~~~~~~~~~~~fy~~vLG~~~~~~--~-~~----~~~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~   75 (120)
                      |=|=.++.+...+||.++||-+.+..  + ++    .....-.+-|.+++..+.+...+...     +    ...++++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~-----~----~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGT-----E----LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCC-----C----CCEEEEec
Confidence            44456788899999999997643211  1 11    11122334577888877665432110     1    12357888


Q ss_pred             ECCHHH---HHHHHHHCCCeEEe----cCCCccEEEEeCCCCCeEEEEee
Q 033399           76 IRDVSK---LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        76 v~d~d~---~~~~l~~~Gv~~~~----~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++.++   +.++|.+ |.++..    .++|.+...|+||.|+.+.|..+
T Consensus        80 ~~~~~e~~~~~~~L~~-gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGLKD-EGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHHHT-TCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHhcc-CCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            887665   5567754 556655    36888889999999999999764

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.07  E-value=1.8e-06  Score=56.99  Aligned_cols=83  Identities=12%  Similarity=0.019  Sum_probs=48.9

Q ss_pred             chhhhhhhhhhccCceEeccCCCCC-----CCceeEEEEeCC--eEEEEEecCCCCC-CCC-----CCCCCCCcceEEEE
Q 033399            9 KREINKHQRFNLLGLEINEARPHDK-----LPYRGAWLWVGA--EMIHLMELPNPDP-LSG-----RPEHGGRDRHTCIA   75 (120)
Q Consensus         9 ~~~~~~~fy~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~--~~i~l~~~~~~~~-~~~-----~~~~~~~~~hi~f~   75 (120)
                      +.+...+||.++||++.....+..+     .......+..++  ..+.+.+...+.. ...     ....+.+++||||.
T Consensus        32 dld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~~~G~GiQHIAf~  111 (230)
T d1sqda2          32 ELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALM  111 (230)
T ss_dssp             CHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEE
T ss_pred             CHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhhccCCceeEEEEE
Confidence            4577888999999998864322111     111222233332  3666666432211 000     00123478999999


Q ss_pred             ECCHHHHHHHHHHCCC
Q 033399           76 IRDVSKLKMILDKAGI   91 (120)
Q Consensus        76 v~d~d~~~~~l~~~Gv   91 (120)
                      |+|+.++.+.|+++|+
T Consensus       112 tdDI~aav~~LrarG~  127 (230)
T d1sqda2         112 SEDIFRTLREMRKRSS  127 (230)
T ss_dssp             ESCHHHHHHHHHHHGG
T ss_pred             eCCHHHHHHHHHHhhc
Confidence            9999999999999743

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=96.07  E-value=0.022  Score=31.68  Aligned_cols=49  Identities=20%  Similarity=0.307  Sum_probs=38.7

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ++|+.+.|+|++++.+-.++ .|.++..... ...+++.++++..+.+.+.
T Consensus         4 i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            68999999999999998876 7998876433 3456677888888888764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.05  E-value=0.064  Score=32.49  Aligned_cols=101  Identities=12%  Similarity=-0.054  Sum_probs=61.1

Q ss_pred             eeccchhhhhhhhhhccCc-eEec--cCCC----CC-CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 033399            5 YKRKKREINKHQRFNLLGL-EINE--ARPH----DK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   76 (120)
Q Consensus         5 ~~~~~~~~~~~fy~~vLG~-~~~~--~~~~----~~-~~~~~~~l~~g~~~i~l~~~~~~~~~~~~~~~~~~~~hi~f~v   76 (120)
                      |=.+..+....||.++||- ++..  ..+.    +. ...-.+.+.+++..+.+...+ +.   . +  .+...++++.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~-~~---~-~--~~~~~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PA---F-R--HSEAFSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TT---C-C--CCTTEEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCC-CC---C-C--CCCCeEEEEec
Confidence            5567888899999999954 3321  1111    11 112345577787766554321 11   1 1  12236899999


Q ss_pred             CC---HHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEEee
Q 033399           77 RD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        77 ~d---~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +|   ++.+++.|.+.| ++.. +.|    .++|+-|..+.|..+
T Consensus        81 d~~eE~d~~f~~LsegG-~~~~-~~G----~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNG-GEES-ACG----WCRDKWGISWQITPR  119 (156)
T ss_dssp             SSHHHHHHHHHHHHHTT-CEEC-STT----EEECTTSCEEEEEEH
T ss_pred             CCHHHHHHHHHHHhccC-CCCC-CCe----EEECCCCCEEEeChH
Confidence            87   556677887666 3333 333    389999999999853

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.44  E-value=0.03  Score=32.63  Aligned_cols=50  Identities=12%  Similarity=0.259  Sum_probs=38.0

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec---------------CCCccEEEEeCCCC-CeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS---------------KSGRPAIFTRDPDA-NALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~---------------~~g~~~~~~~DPdG-n~iEl~~  117 (120)
                      +++|+++.|.|+++..+..++.|.++...               ......+++..++| ..+++.+
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~   74 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSR   74 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEE
T ss_pred             EEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEe
Confidence            47899999999999999998899887541               11235677788875 5777765

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=95.26  E-value=0.059  Score=32.24  Aligned_cols=51  Identities=12%  Similarity=0.113  Sum_probs=35.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec-----CCCccEEEEeCCCCCeEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~-----~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      +++|++|.|.|++++.+..++ .|.+....     .......++....+..++|.+.
T Consensus         7 ~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            579999999999999999975 79987652     1122333444445666777764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.043  Score=32.29  Aligned_cols=28  Identities=7%  Similarity=-0.011  Sum_probs=24.2

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      +++|++|.|.|++++.+... ..|.+...
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~   39 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLA   39 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEE
Confidence            57899999999999999885 57998765

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=93.98  E-value=0.22  Score=28.31  Aligned_cols=52  Identities=12%  Similarity=0.042  Sum_probs=35.3

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCccEEEEe-----CCCCCeEEEEee
Q 033399           67 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTR-----DPDANALEFTQV  118 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~----~~g~~~~~~~-----DPdGn~iEl~~~  118 (120)
                      .+++|+++.|.|++++.+..++ .|.+....    ..+....+..     ...+..+|+.+.
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~   67 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   67 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhh
Confidence            3579999999999999998866 77776542    2333333332     244668888764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=93.59  E-value=0.085  Score=29.94  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=32.9

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCccEEEEeCCCCCeEEEE
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      ++.|+++.|.|+++..+-.++.|..+.........+.+.-+++..+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            4689999999999999988888887755322222333444555555543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=93.08  E-value=0.14  Score=30.85  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=26.5

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecC
Q 033399           67 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK   97 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~   97 (120)
                      .+++||++.|.|+++..+...+ .|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            3579999999999999998887 799887753

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=92.30  E-value=0.33  Score=30.91  Aligned_cols=51  Identities=14%  Similarity=0.180  Sum_probs=37.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe---------cCCCccEEEEeCCCCC-eEEEEee
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL---------SKSGRPAIFTRDPDAN-ALEFTQV  118 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~---------~~~g~~~~~~~DPdGn-~iEl~~~  118 (120)
                      .+.||++.|+|++++....++ .|.....         ...+.++..+..|+|. .+++.+.
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~   70 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEP   70 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEE
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeee
Confidence            568999999999999998877 7886532         1245677888999974 4566553

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=91.79  E-value=0.051  Score=32.54  Aligned_cols=31  Identities=13%  Similarity=0.042  Sum_probs=27.0

Q ss_pred             CCcceEEEEECCHHHHHHHHHHCCCeEEecC
Q 033399           67 GRDRHTCIAIRDVSKLKMILDKAGISYTLSK   97 (120)
Q Consensus        67 ~~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~~   97 (120)
                      .++.||.|.|+|++++.+.+++.|.......
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~   38 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATH   38 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEecc
Confidence            3579999999999999999999999887643

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=91.64  E-value=0.31  Score=29.27  Aligned_cols=28  Identities=11%  Similarity=0.006  Sum_probs=24.6

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      +++|++|.|.|++++.+... ..|.+...
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~   41 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAA   41 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEE
Confidence            57999999999999999886 48998865

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.45  E-value=0.34  Score=28.72  Aligned_cols=28  Identities=14%  Similarity=0.181  Sum_probs=24.6

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      +++|++|.|.|++++.+..++ .|.+...
T Consensus        12 ~~dHv~i~V~Dle~a~~fY~~~LGf~~~~   40 (167)
T d1sqda1          12 RFHHIEFWCGDATNVARRFSWGLGMRFSA   40 (167)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEE
Confidence            579999999999999999975 8998755

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.42  E-value=0.21  Score=28.70  Aligned_cols=28  Identities=7%  Similarity=0.210  Sum_probs=24.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      +++|+++.|.|+++..+-..+ .|.++..
T Consensus         6 gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~   34 (144)
T d1zswa1           6 GHHHISMVTKNANENNHFYKNVLGLRRVK   34 (144)
T ss_dssp             SEEEEEEEESCHHHHHHHHHTTTCCEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHHhCCeeEe
Confidence            579999999999999998876 8998764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.17  E-value=0.29  Score=29.59  Aligned_cols=50  Identities=18%  Similarity=0.199  Sum_probs=33.4

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec---CCCc-cEEEEe-CCCCCeEEEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGR-PAIFTR-DPDANALEFTQ  117 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~~Gv~~~~~---~~g~-~~~~~~-DPdGn~iEl~~  117 (120)
                      +++|+++.|.|+++..+-.+..|.++...   ..+. ..++.. +...+.+.+..
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~   59 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG   59 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCccccceeccc
Confidence            46899999999999998888899998652   2332 233333 44445555543

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=91.08  E-value=0.38  Score=27.37  Aligned_cols=47  Identities=17%  Similarity=0.159  Sum_probs=32.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCccEEEEe-CCCCCeEEEE
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFT  116 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~~g~~~~~~~-DPdGn~iEl~  116 (120)
                      ++.|++|.|+|++++.+-..+ .|.++.....+  .++++ |-....+.+.
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~   52 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQ   52 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEe
Confidence            368999999999999999988 59988774332  23343 3333445444

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.80  E-value=0.46  Score=27.48  Aligned_cols=30  Identities=20%  Similarity=0.195  Sum_probs=25.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecC
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK   97 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~~   97 (120)
                      +++|+.|.|.|++++.+-..+ .|.++....
T Consensus        16 rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   46 (146)
T d1f1ua1          16 RCAYMEIVVTDLAKSREFYVDVLGLHVTEED   46 (146)
T ss_dssp             EEEEEEEEESCHHHHHHHHTTTTCCEEEEEC
T ss_pred             EEeEEEEEeCCHHHHHHHHHhccCcEEEeec
Confidence            568999999999999998865 898887743

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=89.65  E-value=0.29  Score=25.40  Aligned_cols=26  Identities=12%  Similarity=0.149  Sum_probs=23.8

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEe
Q 033399           70 RHTCIAIRDVSKLKMILDKAGISYTL   95 (120)
Q Consensus        70 ~hi~f~v~d~d~~~~~l~~~Gv~~~~   95 (120)
                      ..+.|.|+|.+.+.+.|+++|+++..
T Consensus        39 ~~~vl~vdd~~~a~~~L~~~G~~vl~   64 (71)
T d2f06a1          39 ANVVIRPSNMDKCIEVLKEKKVDLLA   64 (71)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEEEC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEEEc
Confidence            56899999999999999999999875

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=89.26  E-value=0.71  Score=26.30  Aligned_cols=29  Identities=21%  Similarity=0.130  Sum_probs=24.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      ++.|++|.|+|+++..+...+ .|.++...
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~   36 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDR   36 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEe
Confidence            368999999999999998875 79988764

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.94  E-value=0.75  Score=27.19  Aligned_cols=28  Identities=14%  Similarity=0.192  Sum_probs=24.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      .++|+++.|.|+++..+-.++ .|.++..
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~   51 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQ   51 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEee
Confidence            479999999999999998875 8998764

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=87.14  E-value=1.1  Score=25.31  Aligned_cols=29  Identities=28%  Similarity=0.260  Sum_probs=25.4

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      ++.|+++.|+|++++.+-..+ .|.++...
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~   33 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGS   33 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecc
Confidence            468999999999999999988 59998764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=85.71  E-value=1.9  Score=25.12  Aligned_cols=28  Identities=14%  Similarity=0.108  Sum_probs=23.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      ++.|+++.|.|+++..+-..+ .|.++..
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~   33 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAE   33 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEE
Confidence            468999999999999998775 8888765

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=84.44  E-value=0.75  Score=25.38  Aligned_cols=28  Identities=21%  Similarity=0.267  Sum_probs=23.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      .+.|+++.|.|+++..+-..+ .|.++..
T Consensus         3 r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~   31 (139)
T d2c21a1           3 RMLHTMIRVGDLDRSIKFYTERLGMKVLR   31 (139)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEEEeCCHHHHHHHHHHHhCCEeec
Confidence            468999999999999998876 8888754

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=83.88  E-value=1  Score=25.41  Aligned_cols=29  Identities=17%  Similarity=0.275  Sum_probs=25.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      +++|+++.|.|++++.+..++ .|.++...
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~   33 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHAR   33 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEE
Confidence            478999999999999998876 88888663

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=83.86  E-value=1.8  Score=23.88  Aligned_cols=28  Identities=18%  Similarity=0.256  Sum_probs=22.8

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILD-KAGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~-~~Gv~~~~   95 (120)
                      +++|+++.|.|++++.+... ..|.++..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~   32 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVY   32 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEE
Confidence            46899999999999888665 47888765

>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Thiol-disulfide oxidoreductase ResA
species: Bacillus subtilis [TaxId: 1423]

Probab=83.51  E-value=2  Score=24.24  Aligned_cols=48  Identities=10%  Similarity=0.296  Sum_probs=35.9

Q ss_pred             cceEEEEEC-CHHHHHHHHHHCCCeEEe------------cCCCccEEEEeCCCCCeEEEE
Q 033399           69 DRHTCIAIR-DVSKLKMILDKAGISYTL------------SKSGRPAIFTRDPDANALEFT  116 (120)
Q Consensus        69 ~~hi~f~v~-d~d~~~~~l~~~Gv~~~~------------~~~g~~~~~~~DPdGn~iEl~  116 (120)
                      +..+++.++ +.+++.+.+++.++++..            ...+....|+.|++|+++-..
T Consensus        59 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~liD~~G~i~~~~  119 (137)
T d1st9a_          59 VEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV  119 (137)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHTTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEE
T ss_pred             cccccccccchhhhHHHHHHHcCCCccccccccchhhhhhhccccceEEEECCCCEEEEEE
Confidence            567888885 588888888888887522            124567899999999987654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.90  E-value=0.99  Score=26.46  Aligned_cols=28  Identities=14%  Similarity=0.111  Sum_probs=24.1

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      ++.|+++.|.|+++..+-.++ .|.++..
T Consensus        10 GlgHv~l~v~D~e~t~~FY~~vLG~~~~~   38 (156)
T d1kw3b2          10 GIGHFVRCVPDTAKAMAFYTEVLGFVLSD   38 (156)
T ss_dssp             CSCEEEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             CcceEEEecCCHHHHHHHHHHhcCceeee
Confidence            578999999999999998775 8998754

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=82.30  E-value=1  Score=24.71  Aligned_cols=27  Identities=19%  Similarity=0.207  Sum_probs=23.1

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEe
Q 033399           69 DRHTCIAIRDVSKLKMILDK-AGISYTL   95 (120)
Q Consensus        69 ~~hi~f~v~d~d~~~~~l~~-~Gv~~~~   95 (120)
                      +.|+++.|.|++++.+...+ .|.++..
T Consensus         3 l~Hv~i~V~Dl~~s~~FY~~iLG~~~~~   30 (135)
T d1f9za_           3 LLHTMLRVGDLQRSIDFYTKVLGMKLLR   30 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEEcCCHHHHHHHHHHHhCCEEEe
Confidence            57999999999999998865 7988754

>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Soluble secreted antigen MPT53
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.23  E-value=2.9  Score=23.45  Aligned_cols=50  Identities=20%  Similarity=0.230  Sum_probs=36.0

Q ss_pred             cceEEEEEC-CHHHHHHHHHHCCCeEEe--c----------CCCccEEEEeCCCCCeEEEEee
Q 033399           69 DRHTCIAIR-DVSKLKMILDKAGISYTL--S----------KSGRPAIFTRDPDANALEFTQV  118 (120)
Q Consensus        69 ~~hi~f~v~-d~d~~~~~l~~~Gv~~~~--~----------~~g~~~~~~~DPdGn~iEl~~~  118 (120)
                      ..-+++.++ +.+.+.+.+++.|+.+..  .          ..+....++.||+|++..+...
T Consensus        56 v~~v~v~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~v~~~  118 (134)
T d1lu4a_          56 VTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNP  118 (134)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEEEECCS
T ss_pred             ccccccccccchhhhhhhhhhhccccceeeCchHHHHHHcCCCcCCEEEEEeCCCeEEEEecc
Confidence            455666664 688888888999987643  1          2456788999999998766543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.79  E-value=1.7  Score=24.17  Aligned_cols=29  Identities=14%  Similarity=0.171  Sum_probs=23.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec
Q 033399           68 RDRHTCIAIRDVSKLKMILDK-AGISYTLS   96 (120)
Q Consensus        68 ~~~hi~f~v~d~d~~~~~l~~-~Gv~~~~~   96 (120)
                      +++|++|.|.|++++.+..++ .|.++...
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~   33 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEAR   33 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEe
Confidence            468999999999999988865 77777653