Citrus Sinensis ID: 033504

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccEEEEEcccccccccccHHHHHHHHHHccccccccEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHcccccccccccHcHHccccccccEcccccccccccccccccccccHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHcHHHHHcHHHHHHHcc
Coil and Loop (DISEMBL)
MARSLSNLIFKGiasypsarssrivsgslyhngmkystdvpndpdthedfrptskvdasglslKEVVEqdvkenpvmlymkgvpefpqcgfssLAVRVLGAYSKFSYFCSFSIILHAC
Flexible Loop (DISEMBL)
MARSLSNLIFKgiasypsarssRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPtskvdasglslkEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Low Complexity Region (SEG)
MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Disordered region (IsUnstruct)
*******LIFKGIA********************************************************VKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILH**
Disordered Region (DISOPRED)
*****************************************************************VVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Disordered Region (DISEMBL)
MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Disordered Region (DISPRO)
***********************************************EDFRPTS***ASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSIILHAC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
Q8LBK6	169	Monothiol glutaredoxin-S1	yes	no	0.872	0.609	0.628	1e-30
Q0JM76	185	Monothiol glutaredoxin-S4	yes	no	0.847	0.540	0.427	2e-18
Q0JQ97	185	Monothiol glutaredoxin-S1	no	no	0.830	0.529	0.436	4e-18
Q555C8	143	Monothiol glutaredoxin-5,	yes	no	0.406	0.335	0.5	3e-07
P0AC72	115	Glutaredoxin-4 OS=Shigell	yes	no	0.364	0.373	0.477	3e-06
P0AC69	115	Glutaredoxin-4 OS=Escheri	N/A	no	0.364	0.373	0.477	3e-06
P0AC70	115	Glutaredoxin-4 OS=Escheri	yes	no	0.364	0.373	0.477	3e-06
P0AC71	115	Glutaredoxin-4 OS=Escheri	N/A	no	0.364	0.373	0.477	3e-06
Q6YFE4	143	Monothiol glutaredoxin-5,	N/A	no	0.313	0.258	0.513	4e-06
O30824	107	Glutaredoxin-4 OS=Haemoph	yes	no	0.279	0.308	0.545	1e-05

>sp|Q8LBK6|GRS15_ARATH Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana GN=GRXS15 PE=1 SV=2

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 83/105 (79%), Gaps = 2/105 (1%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYSTDVPNDPDTHEDFRPTSKVDA- 58
           MA SLS+ + KGIA+  + RSSR+ S S+Y NGM ++S+ VP+D DTH+DF+PT KV   
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKVPPD 60

Query: 59  SGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           S  SLK++VE DVK+NPVM+YMKGVPE PQCGFSSLAVRVL  Y+
Sbjct: 61  STDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYN 105

May only reduce GSH-thiol disulfides, but not protein disulfides.
Arabidopsis thaliana (taxid: 3702)

>sp|Q0JM76|GRXS4_ORYSJ Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica GN=GRXS4 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 17/117 (14%)

Query: 1   MARSLSNLIFKGIA-----------SYPSARSSRIVSGSLYHN----GMKYSTDVPNDPD 45
           MAR +S+ + +G+            + P+    R  S  L  +    G   ST V  DPD
Sbjct: 1   MARLMSSALIRGLVRSSCSPTVAAVAQPTIHQFRNYSSGLGGDSTATGDSSSTRVAADPD 60

Query: 46  THEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY 102
           TH+DF+PT+K  +S +S  ++V QD+KENPV++YMKG P+ P+CGFS+LAVRVL  Y
Sbjct: 61  THQDFQPTTK--SSNMSFDDIVSQDIKENPVLIYMKGYPDAPRCGFSALAVRVLKQY 115

May only reduce GSH-thiol disulfides, but not protein disulfides.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q0JQ97|GRXS1_ORYSJ Monothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica GN=GRXS1 PE=2 SV=2

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 21/119 (17%)

Query: 1   MARSLSNLIFKGIASYPSARSSRI--VSGSLYHNGMKYS---------------TDVPND 43
           MAR +S  + +G+    S+R+ R+  VS         YS               T V  D
Sbjct: 1   MARLVSTALMRGLVR--SSRAPRVAAVSQPAIQQFRNYSPGLGGDSRGSGDSSSTRVAAD 58

Query: 44  PDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY 102
           PDTH+DF+PTSK  +S +S  ++V QD+KENPV++YMKG PE P CGFS+LAV+VL  Y
Sbjct: 59  PDTHQDFQPTSK--SSNMSFDDIVAQDIKENPVLIYMKGFPESPMCGFSALAVKVLKLY 115

May only reduce GSH-thiol disulfides, but not protein disulfides.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q555C8|GLRX5_DICDI Monothiol glutaredoxin-5, mitochondrial OS=Dictyostelium discoideum GN=grx5 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 2/50 (4%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSII 114
           E VE  V E+P +LYMKG+PE P+CGFS+ AVR+L A    + F S++++
Sbjct: 39  EDVETQVAESPCILYMKGIPERPECGFSNTAVRILQAEG--AVFTSYNVL 86

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters. Required for normal iron homeostasis.

Dictyostelium discoideum (taxid: 44689)

>sp|P0AC72|GLRX4_SHIFL Glutaredoxin-4 OS=Shigella flexneri GN=grxD PE=3 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

Shigella flexneri (taxid: 623)

>sp|P0AC69|GLRX4_ECOLI Glutaredoxin-4 OS=Escherichia coli (strain K12) GN=grxD PE=1 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

Escherichia coli (strain K12) (taxid: 83333)

>sp|P0AC70|GLRX4_ECOL6 Glutaredoxin-4 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=grxD PE=3 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

>sp|P0AC71|GLRX4_ECO57 Glutaredoxin-4 OS=Escherichia coli O157:H7 GN=grxD PE=3 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

Escherichia coli O157:H7 (taxid: 83334)

>sp|Q6YFE4|GLRX5_LACKL Monothiol glutaredoxin-5, mitochondrial OS=Lachancea kluyveri GN=GRX5 PE=3 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 64  KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLG 100
           K+ +E  ++  PV+L+MKG PEFPQCGFS   + +LG
Sbjct: 33  KQAIESAIESAPVVLFMKGTPEFPQCGFSKATINMLG 69

Monothiol glutaredoxin involved in iron-sulfur biogenesis.

Lachancea kluyveri (taxid: 4934)

>sp|O30824|GLRX4_HAEDU Glutaredoxin-4 OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=grxD PE=3 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 67 VEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
          ++Q + ENP++LYMKG P+FP CGFS+ AV  +
Sbjct: 7  IKQQINENPILLYMKGSPKFPSCGFSARAVEAI 39

Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

Haemophilus ducreyi (strain 35000HP / ATCC 700724) (taxid: 233412)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
255553075	169	Monothiol glutaredoxin-4, putative [Rici	0.872	0.609	0.699	1e-37
225442841	170	PREDICTED: monothiol glutaredoxin-S15, m	0.872	0.605	0.689	1e-37
449469010	171	PREDICTED: monothiol glutaredoxin-S15, m	0.872	0.602	0.673	3e-36
147814938	409	hypothetical protein VITISV_033251 [Viti	0.872	0.251	0.601	2e-34
388494312	163	unknown [Lotus japonicus]	0.830	0.601	0.660	6e-31
317106758	148	JHL25H03.16 [Jatropha curcas]	0.669	0.533	0.721	3e-29
18400858	169	monothiol glutaredoxin-S15 [Arabidopsis	0.872	0.609	0.628	4e-29
297834440	169	glutaredoxin family protein [Arabidopsis	0.872	0.609	0.619	4e-29
21592763	169	unknown [Arabidopsis thaliana]	0.872	0.609	0.619	5e-29
357455115	158	Monothiol glutaredoxin-S15 [Medicago tru	0.796	0.594	0.591	2e-27

>gi|255553075|ref|XP_002517580.1| Monothiol glutaredoxin-4, putative [Ricinus communis] gi|223543212|gb|EEF44744.1| Monothiol glutaredoxin-4, putative [Ricinus communis]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 89/103 (86%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASG 60
           MA++LSN++ K IA   +ARSSR+VSGS  HNGM+YST VP DPDTHEDF+P +K++ SG
Sbjct: 1   MAKTLSNIVLKSIAGLSAARSSRLVSGSYCHNGMRYSTTVPKDPDTHEDFQPNNKLENSG 60

Query: 61  LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           LSLK+VVEQDVK+NPVM+YMKGVP+ PQCGFS+LAVRVL  Y+
Sbjct: 61  LSLKDVVEQDVKDNPVMIYMKGVPDLPQCGFSALAVRVLKQYN 103

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442841|ref|XP_002285351.1| PREDICTED: monothiol glutaredoxin-S15, mitochondrial isoform 1 [Vitis vinifera] gi|297743395|emb|CBI36262.3| unnamed protein product [Vitis vinifera]

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/103 (68%), Positives = 92/103 (89%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASG 60
           MARSLSN   KGI+S+PSAR S +VSGS++ NGM+YST VPNDPDTH+DF+ T+K+++SG
Sbjct: 1   MARSLSNAFLKGISSFPSARFSTMVSGSIFQNGMRYSTTVPNDPDTHDDFKSTNKLESSG 60

Query: 61  LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           L+L+++VEQDVK+NPVM+YMKGVP+ P+CGFSSLAVRVL  Y+
Sbjct: 61  LALQDIVEQDVKDNPVMIYMKGVPDVPRCGFSSLAVRVLKEYN 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469010|ref|XP_004152214.1| PREDICTED: monothiol glutaredoxin-S15, mitochondrial-like [Cucumis sativus] gi|449484186|ref|XP_004156810.1| PREDICTED: monothiol glutaredoxin-S15, mitochondrial-like [Cucumis sativus]

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/104 (67%), Positives = 91/104 (87%), Gaps = 1/104 (0%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSL-YHNGMKYSTDVPNDPDTHEDFRPTSKVDAS 59
           MA+SLSNL+FKG+A  P+ R+SRIV   L Y +GM+YST VPN+PDTH+DF+PT+K++ S
Sbjct: 2   MAKSLSNLLFKGLAGLPATRTSRIVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLENS 61

Query: 60  GLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           GLSL++VVEQDV++NPVM+YMKGVP+ PQCGFS+LAVRVL  Y+
Sbjct: 62  GLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYN 105

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147814938|emb|CAN74745.1| hypothetical protein VITISV_033251 [Vitis vinifera]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 92/118 (77%), Gaps = 15/118 (12%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIV---------------SGSLYHNGMKYSTDVPNDPD 45
           MARSLSN   KGI+S+PSAR S +V               SGS++ NGM+YST VPNDPD
Sbjct: 225 MARSLSNAFLKGISSFPSARFSTMVRTKIYGTVIQFFNQVSGSIFQNGMRYSTTVPNDPD 284

Query: 46  THEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           TH+DF+ T+K+++SGL+L+++VEQDVK+NPVM+YMKGVP+ P+CGFSSLAVRVL  Y+
Sbjct: 285 THDDFKSTNKLESSGLALQDIVEQDVKDNPVMIYMKGVPDVPRCGFSSLAVRVLKEYN 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494312|gb|AFK35222.1| unknown [Lotus japonicus]

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 5/103 (4%)

Query: 1   MARSLSNLIFKGIASYPSARS-SRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDAS 59
           MA SL NL+FKGIA    ARS SR ++GS Y+  M+YST V ND DTH+DF+P +K++ S
Sbjct: 1   MATSLKNLLFKGIA----ARSLSRPLNGSFYNYRMRYSTTVSNDSDTHDDFKPANKLENS 56

Query: 60  GLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY 102
           G SL+ +VEQDVK+NPVM+YMKGVPE+PQCGFSSLAVRVL  Y
Sbjct: 57  GTSLENIVEQDVKDNPVMIYMKGVPEYPQCGFSSLAVRVLNLY 99

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106758|dbj|BAJ53252.1| JHL25H03.16 [Jatropha curcas]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 71/79 (89%)

Query: 25  VSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLKEVVEQDVKENPVMLYMKGVP 84
           VSGS Y+NGM+YST VPNDPDTHEDF+P  K ++SG+SL ++VEQDVK+NPVM+YMKGVP
Sbjct: 4   VSGSFYYNGMRYSTTVPNDPDTHEDFQPNIKTESSGVSLNDIVEQDVKDNPVMIYMKGVP 63

Query: 85  EFPQCGFSSLAVRVLGAYS 103
           ++PQCGFS+LAVRVL  Y+
Sbjct: 64  DYPQCGFSALAVRVLKQYN 82

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400858|ref|NP_566522.1| monothiol glutaredoxin-S15 [Arabidopsis thaliana] gi|79313249|ref|NP_001030704.1| monothiol glutaredoxin-S15 [Arabidopsis thaliana] gi|119370633|sp|Q8LBK6.2|GRS15_ARATH RecName: Full=Monothiol glutaredoxin-S15, mitochondrial; Short=AtGrxS15; Flags: Precursor gi|11994338|dbj|BAB02297.1| unnamed protein product [Arabidopsis thaliana] gi|30102572|gb|AAP21204.1| At3g15660 [Arabidopsis thaliana] gi|110743466|dbj|BAE99619.1| hypothetical protein [Arabidopsis thaliana] gi|222424054|dbj|BAH19988.1| AT3G15660 [Arabidopsis thaliana] gi|332642189|gb|AEE75710.1| monothiol glutaredoxin-S15 [Arabidopsis thaliana] gi|332642190|gb|AEE75711.1| monothiol glutaredoxin-S15 [Arabidopsis thaliana]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 83/105 (79%), Gaps = 2/105 (1%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYSTDVPNDPDTHEDFRPTSKVDA- 58
           MA SLS+ + KGIA+  + RSSR+ S S+Y NGM ++S+ VP+D DTH+DF+PT KV   
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKVPPD 60

Query: 59  SGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           S  SLK++VE DVK+NPVM+YMKGVPE PQCGFSSLAVRVL  Y+
Sbjct: 61  STDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYN 105

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834440|ref|XP_002885102.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] gi|297330942|gb|EFH61361.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYSTDVPNDPDTHEDFRPTSKV-DA 58
           MA SLS  + KGIA+  + RSSR+ S S+Y NGM ++S+ VP+D DTH+DF+PT K    
Sbjct: 1   MAASLSTRLLKGIANLQAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKAPSG 60

Query: 59  SGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           S  SLK++VE DVK+NPVM+YMKGVPE PQCGFSSLAVRVL  Y+
Sbjct: 61  STDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYN 105

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592763|gb|AAM64712.1| unknown [Arabidopsis thaliana]

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 2/105 (1%)

Query: 1   MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYSTDVPNDPDTHEDFRPTSKVDA- 58
           MA SLS+ + KGIA+  + RSSR+ S S+Y NGM ++S+ VP+D DTH+DF+PT KV   
Sbjct: 1   MAASLSSRLIKGIANLKAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKVPPD 60

Query: 59  SGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
           S  SLK++VE DVK+NPVM+YMKGVPE PQCGFSSLAVR+L  Y+
Sbjct: 61  STDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRILQQYN 105

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357455115|ref|XP_003597838.1| Monothiol glutaredoxin-S15 [Medicago truncatula] gi|355486886|gb|AES68089.1| Monothiol glutaredoxin-S15 [Medicago truncatula] gi|388510724|gb|AFK43428.1| unknown [Medicago truncatula]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 79/98 (80%), Gaps = 4/98 (4%)

Query: 5   LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTSKVDASGLSLK 64
           ++ ++FKGIA+   + ++R+ S S Y  GM+Y+T V ND DTH+DF+PT+KV+ SG SL 
Sbjct: 1   MATILFKGIAA--RSLTTRLTSSSYY--GMRYTTKVSNDTDTHDDFKPTNKVENSGTSLS 56

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY 102
            ++EQDVK+NPVM+YMKGVP+FPQCGFSSLAV+VL  Y
Sbjct: 57  SIIEQDVKDNPVMIYMKGVPDFPQCGFSSLAVKVLKQY 94

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
TAIR|locus:2093297	169	GRX4 "glutaredoxin 4" [Arabido	0.872	0.609	0.619	7.9e-30
UNIPROTKB|Q83DV9	99	CBU_0583 "Glutaredoxin" [Coxie	0.440	0.525	0.462	1.6e-08
TIGR_CMR|CBU_0583	99	CBU_0583 "glutaredoxin-related	0.440	0.525	0.462	1.6e-08
DICTYBASE|DDB_G0274657	143	DDB_G0274657 "glutaredoxin-rel	0.406	0.335	0.5	3.3e-08
UNIPROTKB|Q606E0	110	MCA2078 "Glutaredoxin" [Methyl	0.296	0.318	0.571	8.7e-08
CGD|CAL0004286	175	orf19.2782 [Candida albicans (	0.322	0.217	0.526	1.1e-07
UNIPROTKB|P0AC69	115	grxD "glutaredoxin 4" [Escheri	0.364	0.373	0.477	1.4e-07
UNIPROTKB|Q60C52	110	MCA0259 "Glutaredoxin" [Methyl	0.389	0.418	0.468	1.8e-07
UNIPROTKB|Q9KQF4	110	VC_2044 "Glutaredoxin" [Vibrio	0.347	0.372	0.523	1.8e-07
TIGR_CMR|VC_2044	110	VC_2044 "conserved hypothetica	0.347	0.372	0.523	1.8e-07

TAIR|locus:2093297 GRX4 "glutaredoxin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 65/105 (61%), Positives = 82/105 (78%)

Query:     1 MARSLSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYSTDVPNDPDTHEDFRPTSKVDAS 59
             MA SLS+ + KGIA+  + RSSR+ S S+Y NGM ++S+ VP+D DTH+DF+PT KV   
Sbjct:     1 MAASLSSRLIKGIANLKAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKVPPD 60

Query:    60 GL-SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS 103
                SLK++VE DVK+NPVM+YMKGVPE PQCGFSSLAVRVL  Y+
Sbjct:    61 STDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYN 105

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0048653 "anther development" evidence=RCA

UNIPROTKB|Q83DV9 CBU_0583 "Glutaredoxin" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query:    61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSII 114
             + + E ++Q V  NPV+LYMKG P+FPQCGFS   V++L    K   F SF+++
Sbjct:     1 MRVHEEIQQQVTSNPVVLYMKGTPDFPQCGFSGRVVQIL-RQCKID-FTSFNVL 52

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0583 CBU_0583 "glutaredoxin-related protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query:    61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSII 114
             + + E ++Q V  NPV+LYMKG P+FPQCGFS   V++L    K   F SF+++
Sbjct:     1 MRVHEEIQQQVTSNPVVLYMKGTPDFPQCGFSGRVVQIL-RQCKID-FTSFNVL 52

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0274657 DDB_G0274657 "glutaredoxin-related family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query:    65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSYFCSFSII 114
             E VE  V E+P +LYMKG+PE P+CGFS+ AVR+L A    + F S++++
Sbjct:    39 EDVETQVAESPCILYMKGIPERPECGFSNTAVRILQAEG--AVFTSYNVL 86

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q606E0 MCA2078 "Glutaredoxin" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 20/35 (57%), Positives = 29/35 (82%)

Query:    65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
             E +++ + +NPV+LYMKG P+FPQCGFS  AV++L
Sbjct:     5 ENIKRQIADNPVILYMKGTPDFPQCGFSGRAVQIL 39

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

CGD|CAL0004286 orf19.2782 [Candida albicans (taxid:5476)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 20/38 (52%), Positives = 30/38 (78%)

Query:    63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLG 100
             LK+ +++ V  +PV+L+MKG PEFPQCGFS   +++LG
Sbjct:    43 LKDALDKAVTTSPVVLFMKGTPEFPQCGFSRATIQILG 80

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IEA

GO:0015036 "disulfide oxidoreductase activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

UNIPROTKB|P0AC69 grxD "glutaredoxin 4" [Escherichia coli K-12 (taxid:83333)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query:    65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSY 107
             E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct:     6 EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q60C52 MCA0259 "Glutaredoxin" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 22/47 (46%), Positives = 33/47 (70%)

Query:    62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSY 107
             ++++ +   + ++PV+LYMKGVPE PQCGFS+ AV  L A    F+Y
Sbjct:     3 TIEDTIRDQIAKHPVLLYMKGVPEMPQCGFSAKAVSCLQAAGVPFAY 49

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q9KQF4 VC_2044 "Glutaredoxin" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 22/42 (52%), Positives = 30/42 (71%)

Query:    67 VEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSY 107
             ++Q + ENP++LYMKG P+ P CGFSS A + L A   KF+Y
Sbjct:     7 IKQQIAENPILLYMKGSPKLPSCGFSSQAAQALMACGEKFAY 48

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_2044 VC_2044 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 22/42 (52%), Positives = 30/42 (71%)

Query:    67 VEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSY 107
             ++Q + ENP++LYMKG P+ P CGFSS A + L A   KF+Y
Sbjct:     7 IKQQIAENPILLYMKGSPKLPSCGFSSQAAQALMACGEKFAY 48

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LBK6	GRS15_ARATH	No assigned EC number	0.6285	0.8728	0.6094	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034560001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (170 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00020703001	SubName- Full=Putative uncharacterized protein (Chromosome chr14 scaffold_21, whole genome shot [...] (114 aa)			•				•		0.470
	GSVIVG00034899001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (93 aa)	•				•				0.458

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	118
TIGR00365	97	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4	4e-17
cd03028	90	cd03028, GRX_PICOT_like, Glutaredoxin (GRX) family	7e-16
COG0278	105	COG0278, COG0278, Glutaredoxin-related protein [Po	1e-15
PRK10824	115	PRK10824, PRK10824, glutaredoxin-4; Provisional	1e-11
PTZ00062	204	PTZ00062, PTZ00062, glutaredoxin; Provisional	1e-04

>gnl|CDD|188046 TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family

 Score = 70.2 bits (173), Expect = 4e-17
 Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)

Query: 64  KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
            E +++ + ENPV+LYMKG P+FPQCGFS+ AV++L A    F+Y 
Sbjct: 2   IERIKEQIAENPVVLYMKGTPQFPQCGFSARAVQILNACGVPFAYV 47

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation [Energy metabolism, Electron transport]. Length = 97

>gnl|CDD|239326 cd03028, GRX_PICOT_like, Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

 Score = 66.7 bits (164), Expect = 7e-16
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 67  VEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
           +++ +KENPV+L+MKG PE P+CGFS   V++L      F  F
Sbjct: 1   IKKLIKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTF 43

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein in Arabidopsis thaliana, and PfGLP-1, a GRX-like protein from Plasmodium falciparum. Length = 90

>gnl|CDD|223355 COG0278, COG0278, Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

 Score = 66.5 bits (163), Expect = 1e-15
 Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 2/46 (4%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS--KFSYF 108
           + +++ +KENPV+L+MKG PEFPQCGFS+ AV++L A     F+Y 
Sbjct: 6   DRIQKQIKENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYV 51

Length = 105

>gnl|CDD|182759 PRK10824, PRK10824, glutaredoxin-4; Provisional

 Score = 56.8 bits (137), Expect = 1e-11
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAY 49

Length = 115

>gnl|CDD|240250 PTZ00062, PTZ00062, glutaredoxin; Provisional

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 59  SGLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
           S     E +E+ ++ + ++L+MKG   FP C FS+  V +L
Sbjct: 98  SSEDTVEKIERLIRNHKILLFMKGSKTFPFCRFSNAVVNML 138

Length = 204

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.96
KOG0911	227	consensus Glutaredoxin-related protein [Posttransl	99.91
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.82
KOG0911	227	consensus Glutaredoxin-related protein [Posttransl	99.68
PRK10824	115	glutaredoxin-4; Provisional	99.68
PTZ00062	204	glutaredoxin; Provisional	99.54
PRK10824	115	glutaredoxin-4; Provisional	99.45
PTZ00062	204	glutaredoxin; Provisional	99.38
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.24
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.17
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.14
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.07
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	98.28
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	97.7
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	97.66
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	97.66
PHA03050	108	glutaredoxin; Provisional	97.46
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	97.43
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	97.38
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	97.34
PRK10638	83	glutaredoxin 3; Provisional	97.22
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	97.02
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	96.86
PHA03050	108	glutaredoxin; Provisional	96.63
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	96.55
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	96.48
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	96.38
PRK01655	131	spxA transcriptional regulator Spx; Reviewed	96.01
PRK10329	81	glutaredoxin-like protein; Provisional	95.77
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	95.77
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	95.76
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	95.7
TIGR01617	117	arsC_related transcriptional regulator, Spx/MgsR f	95.49
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	95.46
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	95.45
PRK11200	85	grxA glutaredoxin 1; Provisional	95.42
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	95.12
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	95.1
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	95.06
PRK12559	131	transcriptional regulator Spx; Provisional	95.05
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	95.05
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	95.04
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	94.97
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	94.84
PRK13344	132	spxA transcriptional regulator Spx; Reviewed	94.84
PRK10026	141	arsenate reductase; Provisional	94.79
COG1393	117	ArsC Arsenate reductase and related proteins, glut	94.76
KOG1752	104	consensus Glutaredoxin and related proteins [Postt	94.74
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	94.67
cd03030	92	GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3	94.59
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	94.35
PRK10853	118	putative reductase; Provisional	94.02
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	94.0
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	93.86
PRK10638	83	glutaredoxin 3; Provisional	93.83
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	93.66
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	93.63
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	92.86
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	92.74
TIGR00014	114	arsC arsenate reductase (glutaredoxin). composed o	92.73
TIGR02183	86	GRXA Glutaredoxin, GrxA family. This model include	92.49
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	92.35
PF04908	99	SH3BGR: SH3-binding, glutamic acid-rich protein; I	91.9
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	91.71
KOG1752	104	consensus Glutaredoxin and related proteins [Postt	91.69
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	91.56
PF03960	110	ArsC: ArsC family; InterPro: IPR006660 Several bac	91.45
cd03041	77	GST_N_2GST_N GST_N family, 2 repeats of the N-term	90.98
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	90.87
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	90.67
cd03061	91	GST_N_CLIC GST_N family, Chloride Intracellular Ch	90.42
cd00570	71	GST_N_family Glutathione S-transferase (GST) famil	89.2
PRK10329	81	glutaredoxin-like protein; Provisional	88.66
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	88.12
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	86.84
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	86.41
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	86.15
PRK10026	141	arsenate reductase; Provisional	84.88
COG1393	117	ArsC Arsenate reductase and related proteins, glut	84.01
cd03045	74	GST_N_Delta_Epsilon GST_N family, Class Delta and	83.37
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	83.28
PRK11200	85	grxA glutaredoxin 1; Provisional	82.75
cd03040	77	GST_N_mPGES2 GST_N family; microsomal Prostaglandi	82.62
cd03060	71	GST_N_Omega_like GST_N family, Omega-like subfamil	81.99
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	81.66
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	81.11
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	81.03
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	80.45

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=6e-31  Score=182.47  Aligned_cols=85  Identities=21%  Similarity=0.224  Sum_probs=76.5

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcC-CCCcc-CCCCCcccccccCCCcccCCChhhHHHHHH-HHhhcCCeeeeecC
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNG-MKYST-DVPNDPDTHEDFRPTSKVDASGLSLKEVVE-QDVKENPVMLYMKG   82 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~-~~~~~-dVl~d~d~r~dlK~ys~wpT~p~~l~~~Ik-~li~~~~vvlfmKG   82 (118)
                      +||||||||++|+||||++++++|..+| ++|.+ |||+|+++|+++|.||+|||+| ++  .|+ ++|++++|+.-|--
T Consensus        17 VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~WPT~P-QL--yi~GEfvGG~DIv~Em~q   93 (105)
T COG0278          17 VVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNWPTFP-QL--YVNGEFVGGCDIVREMYQ   93 (105)
T ss_pred             eEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCCCCCc-ee--eECCEEeccHHHHHHHHH
Confidence            7999999999999999999999999999 89999 9999999999999999999999 46  554 89999999988877


Q ss_pred             CCCCCCCcchHHHHHHHHhc
Q 033504           83 VPEFPQCGFSSLAVRVLGAY  102 (118)
Q Consensus        83 tp~~P~CgFS~~~v~iL~~~  102 (118)
                               |+++-++|++.
T Consensus        94 ---------~GELq~~l~~~  104 (105)
T COG0278          94 ---------SGELQTLLKEA  104 (105)
T ss_pred             ---------cchHHHHHHhc
Confidence                     66777777654

>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=3.5e-26  Score=177.42  Aligned_cols=85  Identities=21%  Similarity=0.231  Sum_probs=75.3

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCChhhHHHHHH-HHhhcCCeeeeecC
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASGLSLKEVVE-QDVKENPVMLYMKG   82 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p~~l~~~Ik-~li~~~~vvlfmKG   82 (118)
                      .++|||||+|++|+||||+++|++|+++||+|++ |||+|+++|+++|.||+|||+| ++  +|+ +++++++|+.-|.-
T Consensus       140 ~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWPTfP-Ql--yI~GEFiGGlDIl~~m~~  216 (227)
T KOG0911|consen  140 PVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWPTFP-QL--YVKGEFIGGLDILKEMHE  216 (227)
T ss_pred             eEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCCCcc-ce--eECCEeccCcHHHHHHhh
Confidence            5899999999999999999999999999999999 9999999999999999999999 46  554 78888888888776


Q ss_pred             CCCCCCCcchHHHHHHHHh
Q 033504           83 VPEFPQCGFSSLAVRVLGA  101 (118)
Q Consensus        83 tp~~P~CgFS~~~v~iL~~  101 (118)
                               +..+.++|++
T Consensus       217 ---------~geL~~~l~~  226 (227)
T KOG0911|consen  217 ---------KGELVYTLKE  226 (227)
T ss_pred             ---------cccHHHHhhc
Confidence                     5556666654

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=1.5e-20  Score=130.58  Aligned_cols=51  Identities=47%  Similarity=0.948  Sum_probs=48.9

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC--Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS--KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~--~~~~~dv~~  112 (118)
                      ++.++|++.|++|+|||||||||+.|+||||+++|+||+.+|  +|.+||||+
T Consensus         3 ~i~~~I~~~i~~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~   55 (105)
T COG0278           3 EILDRIQKQIKENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQ   55 (105)
T ss_pred             hHHHHHHHHhhcCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeecc
Confidence            578899999999999999999999999999999999999999  899999985

>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=3.3e-17  Score=127.46  Aligned_cols=50  Identities=42%  Similarity=0.761  Sum_probs=47.6

Q ss_pred             HHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++++++++++.++|||||||+|+.|+||||+++|+||+++| +|++||||+
T Consensus       128 ~~~~l~~lv~a~~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~  178 (227)
T KOG0911|consen  128 LDNRLEKLVKAKPVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLT  178 (227)
T ss_pred             HHHHHHHhcccCeEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccC
Confidence            45599999999999999999999999999999999999999 999999985

>PRK10824 glutaredoxin-4; Provisional

Probab=99.68  E-value=1.5e-18  Score=123.05  Aligned_cols=90  Identities=18%  Similarity=0.201  Sum_probs=75.3

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCChhhHHHHH-HHHhhcCCeeeeecC
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASGLSLKEVV-EQDVKENPVMLYMKG   82 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p~~l~~~I-k~li~~~~vvlfmKG   82 (118)
                      =+||||||||+.|.|+||+++.++|.+.|++|.+ ||.+|++.++.++.+++|||.| ++  .| .++|++++.+.=|.-
T Consensus        16 ~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~TVP-QI--FI~G~~IGG~ddl~~l~~   92 (115)
T PRK10824         16 PILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFP-QL--WVDGELVGGCDIVIEMYQ   92 (115)
T ss_pred             CEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCCCCC-eE--EECCEEEcChHHHHHHHH
Confidence            3799999999999999999999999999999999 9999999999999999999999 34  33 256666666665554


Q ss_pred             CCCCCCCcchHHHHHHHHhcC-Ccc
Q 033504           83 VPEFPQCGFSSLAVRVLGAYS-KFS  106 (118)
Q Consensus        83 tp~~P~CgFS~~~v~iL~~~~-~~~  106 (118)
                               ++++.++|++.+ .|.
T Consensus        93 ---------~G~L~~lL~~~~~~~~  108 (115)
T PRK10824         93 ---------RGELQQLIKETAAKYK  108 (115)
T ss_pred             ---------CCCHHHHHHHHHhhhc
Confidence                     667778887777 554

>PTZ00062 glutaredoxin; Provisional

Probab=99.54  E-value=2.3e-16  Score=121.28  Aligned_cols=56  Identities=30%  Similarity=0.431  Sum_probs=54.3

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      =+||||||+|..|.|+|+++++++|+++|++|.+ ||.+|++.|+.++.+++|||.|
T Consensus       114 ~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~~TvP  170 (204)
T PTZ00062        114 KILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWPTYP  170 (204)
T ss_pred             CEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCCCCCC
Confidence            3799999999999999999999999999999999 9999999999999999999998

>PRK10824 glutaredoxin-4; Provisional

Probab=99.45  E-value=1.3e-13  Score=97.74  Aligned_cols=51  Identities=41%  Similarity=0.856  Sum_probs=48.0

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +..++|+++|++++||+||||||+.|.|+||+++.++|++.| +|.++||.+
T Consensus         3 ~~~~~v~~~I~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~   54 (115)
T PRK10824          3 TTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ   54 (115)
T ss_pred             hHHHHHHHHHhcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC
Confidence            356799999999999999999999999999999999999999 999999874

>PTZ00062 glutaredoxin; Provisional

Probab=99.38  E-value=1.8e-12  Score=99.63  Aligned_cols=51  Identities=29%  Similarity=0.617  Sum_probs=48.7

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++.++++++|++++||+||||+|+.|.|+|+++++++|+++| .|..+||.+
T Consensus       101 ~~~~~v~~li~~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~  152 (204)
T PTZ00062        101 DTVEKIERLIRNHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE  152 (204)
T ss_pred             HHHHHHHHHHhcCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC
Confidence            578899999999999999999999999999999999999999 999999974

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.24  E-value=3.7e-12  Score=87.02  Aligned_cols=56  Identities=20%  Similarity=0.267  Sum_probs=53.6

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      =+++|+||+++.|.|+|++++.++|+++|++|.. ||.++++.++.++..++|+|.|
T Consensus        13 ~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP   69 (97)
T TIGR00365        13 PVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIP   69 (97)
T ss_pred             CEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCC
Confidence            3789999999999999999999999999999999 9999999999999999999988

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.17  E-value=4.9e-11  Score=81.45  Aligned_cols=48  Identities=52%  Similarity=0.998  Sum_probs=45.7

Q ss_pred             HHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        65 ~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +++++++++++|++|+||+++.|.|+|++++.++|+++| .|..+||.+
T Consensus         3 ~~v~~~i~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~   51 (97)
T TIGR00365         3 ERIKEQIKENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE   51 (97)
T ss_pred             HHHHHHhccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC
Confidence            588999999999999999999999999999999999999 999999964

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.14  E-value=2.1e-11  Score=81.80  Aligned_cols=57  Identities=23%  Similarity=0.288  Sum_probs=53.4

Q ss_pred             eeeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            4 SLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         4 ~~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      -=+|+|+||+|+.|.|+|+.++.++|+++|++|.. ||.+|++.++.++..+++.|.|
T Consensus         8 ~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP   65 (90)
T cd03028           8 NPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFP   65 (90)
T ss_pred             CCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCC
Confidence            34799999999999999999999999999999999 9999999999999888898887

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.07  E-value=1.3e-10  Score=77.83  Aligned_cols=46  Identities=43%  Similarity=0.837  Sum_probs=43.1

Q ss_pred             HHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           67 VEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        67 Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      |+++|++++|++||||+|+.|.|.|++++.++|++.| .|..+||.+
T Consensus         1 ~~~~i~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~   47 (90)
T cd03028           1 IKKLIKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILE   47 (90)
T ss_pred             ChhhhccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4678999999999999999999999999999999999 999999854

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=98.28  E-value=4.1e-08  Score=67.17  Aligned_cols=52  Identities=12%  Similarity=0.146  Sum_probs=44.2

Q ss_pred             eeeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcc---cccccCCCcccCCCh
Q 033504            4 SLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPD---THEDFRPTSKVDASG   60 (118)
Q Consensus         4 ~~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d---~r~dlK~ys~wpT~p   60 (118)
                      .=+++|.|     |.|+|++++.++|.++|++|.. ||-++++   .++.+...++|+|.|
T Consensus         8 ~~Vvvysk-----~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP   63 (99)
T TIGR02189         8 KAVVIFSR-----SSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVP   63 (99)
T ss_pred             CCEEEEEC-----CCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcC
Confidence            44788888     9999999999999999999999 9998876   445677777888888

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=97.70  E-value=4.1e-05  Score=52.27  Aligned_cols=40  Identities=15%  Similarity=0.234  Sum_probs=37.0

Q ss_pred             HHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           68 EQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        68 k~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .++|++++|++|.|     |.|+|+.++.++|+++| .|..+||..
T Consensus         2 ~~~i~~~~Vvvysk-----~~Cp~C~~ak~~L~~~~i~~~~vdid~   42 (99)
T TIGR02189         2 RRMVSEKAVVIFSR-----SSCCMCHVVKRLLLTLGVNPAVHEIDK   42 (99)
T ss_pred             hhhhccCCEEEEEC-----CCCHHHHHHHHHHHHcCCCCEEEEcCC
Confidence            56899999999999     89999999999999999 999999864

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=97.66  E-value=7.4e-06  Score=50.26  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=40.7

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      |.|++++++.+.|+++|++|+. ||.+|++.++.++..+++.+.|
T Consensus         7 ~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~~~P   51 (60)
T PF00462_consen    7 PGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVRTVP   51 (60)
T ss_dssp             TTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSSSSS
T ss_pred             CCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCCccC
Confidence            8999999999999999999999 9999998899988887887777

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=97.66  E-value=2.8e-05  Score=49.41  Aligned_cols=44  Identities=11%  Similarity=0.178  Sum_probs=39.3

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      |.|++++++.++|+++|++|+. ||.++++.++.++..+.+.+.|
T Consensus         9 ~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP   53 (73)
T cd03027           9 LGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVP   53 (73)
T ss_pred             CCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcC
Confidence            8999999999999999999999 9999988888887777776666

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>PHA03050 glutaredoxin; Provisional

Probab=97.46  E-value=6.5e-06  Score=57.38  Aligned_cols=50  Identities=12%  Similarity=0.147  Sum_probs=41.4

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCC---CCcc-CCCC---CcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGM---KYST-DVPN---DPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~---~~~~-dVl~---d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|-|     |.|+|++++.++|+++++   +|+. ||-+   +++.++.++..+++.|.|
T Consensus        15 V~vys~-----~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP   71 (108)
T PHA03050         15 VTIFVK-----FTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVP   71 (108)
T ss_pred             EEEEEC-----CCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcC
Confidence            566766     669999999999999999   7877 8876   456788888888888877

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=97.43  E-value=7.4e-05  Score=45.37  Aligned_cols=44  Identities=14%  Similarity=0.208  Sum_probs=36.4

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      |.|++++++..+|.+++++|.. |+..+++.++.++..+.+++.|
T Consensus         8 ~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~~P   52 (72)
T cd02066           8 STCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVP   52 (72)
T ss_pred             CCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCCCcC
Confidence            5599999999999999999999 9999887777776665555554

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=97.38  E-value=7.2e-05  Score=47.90  Aligned_cols=45  Identities=16%  Similarity=0.229  Sum_probs=39.4

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      .|.|+++.++.++|+++|++|.. ||-.|++.++.++..+++.+.|
T Consensus         6 ~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~~vP   51 (79)
T TIGR02181         6 KPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRRTVP   51 (79)
T ss_pred             cCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCCCcC
Confidence            48899999999999999999999 9999988888887766677666

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=97.34  E-value=0.00011  Score=46.17  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=35.1

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccC-CCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVD-ASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wp-T~p   60 (118)
                      |.|++++++..+|+++|++|.. ||..+++.++.+....++. +.|
T Consensus         8 ~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP   53 (75)
T cd03418           8 PNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVP   53 (75)
T ss_pred             CCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccC
Confidence            8899999999999999999999 9998876666665444444 444

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>PRK10638 glutaredoxin 3; Provisional

Probab=97.22  E-value=0.00015  Score=47.24  Aligned_cols=45  Identities=11%  Similarity=0.146  Sum_probs=38.7

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      .|.|+|++++.++|.++|++|.. ||..+++.++.+...+.+.+.|
T Consensus         9 ~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~~vP   54 (83)
T PRK10638          9 KATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVP   54 (83)
T ss_pred             CCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcC
Confidence            47899999999999999999999 9998887788877766666666

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=97.02  E-value=0.00044  Score=44.76  Aligned_cols=50  Identities=14%  Similarity=0.211  Sum_probs=37.8

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      -++||.|     |.|++++++.+.|.++|++|+. ||.+|++. ..++..+.+.+.|
T Consensus         9 ~V~ly~~-----~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~-~~~~~~~g~~~vP   59 (79)
T TIGR02190         9 SVVVFTK-----PGCPFCAKAKATLKEKGYDFEEIPLGNDARG-RSLRAVTGATTVP   59 (79)
T ss_pred             CEEEEEC-----CCCHhHHHHHHHHHHcCCCcEEEECCCChHH-HHHHHHHCCCCcC
Confidence            3567766     9999999999999999999999 99776543 2344445555555

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=96.86  E-value=0.00086  Score=42.27  Aligned_cols=49  Identities=18%  Similarity=0.257  Sum_probs=36.3

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.|     |.|+|++++.++|+++|++|.. ||.++++ ...++..+.+.+.|
T Consensus         3 v~lys~-----~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~-~~~~~~~~g~~~vP   52 (72)
T cd03029           3 VSLFTK-----PGCPFCARAKAALQENGISYEEIPLGKDIT-GRSLRAVTGAMTVP   52 (72)
T ss_pred             EEEEEC-----CCCHHHHHHHHHHHHcCCCcEEEECCCChh-HHHHHHHhCCCCcC
Confidence            345555     8999999999999999999999 9987763 33444445555555

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>PHA03050 glutaredoxin; Provisional

Probab=96.63  E-value=0.0033  Score=43.69  Aligned_cols=43  Identities=28%  Similarity=0.465  Sum_probs=36.7

Q ss_pred             HHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-C---cceeehh
Q 033504           64 KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-K---FSYFCSF  111 (118)
Q Consensus        64 ~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~---~~~~dv~  111 (118)
                      .+.++++|++++|++|-+.     .|+|++++.++|+++| .   |..+||-
T Consensus         3 ~~~v~~~i~~~~V~vys~~-----~CPyC~~ak~~L~~~~i~~~~~~~i~i~   49 (108)
T PHA03050          3 EEFVQQRLANNKVTIFVKF-----TCPFCRNALDILNKFSFKRGAYEIVDIK   49 (108)
T ss_pred             HHHHHHHhccCCEEEEECC-----CChHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            4688999999999999986     5999999999999998 3   6666664

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=96.55  E-value=0.0013  Score=41.79  Aligned_cols=44  Identities=9%  Similarity=0.091  Sum_probs=34.4

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcc---cccccCCCcccCCCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPD---THEDFRPTSKVDASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d---~r~dlK~ys~wpT~p   60 (118)
                      +.|++++++.++|.+.+++|.. ++-.+++   .++.++..+++++.|
T Consensus         8 ~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P   55 (82)
T cd03419           8 SYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVP   55 (82)
T ss_pred             CCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCC
Confidence            8999999999999999999888 7766543   445566666666666

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=96.48  E-value=0.0013  Score=41.63  Aligned_cols=35  Identities=9%  Similarity=0.324  Sum_probs=29.7

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .|.|++++++.+.|.++|++|+. ||-+|++.++.+
T Consensus         6 ~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~   41 (72)
T TIGR02194         6 KNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYV   41 (72)
T ss_pred             CCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHH
Confidence            37899999999999999999999 998886544443

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=96.38  E-value=0.0017  Score=44.94  Aligned_cols=37  Identities=24%  Similarity=0.597  Sum_probs=32.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++..++.++.
T Consensus         6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~   43 (111)
T cd03036           6 YPKCSTCRKAKKWLDEHGVDYTAIDIVEEPPSKEELKK   43 (111)
T ss_pred             CCCCHHHHHHHHHHHHcCCceEEecccCCcccHHHHHH
Confidence            38899999999999999999999 99999887766653

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>PRK01655 spxA transcriptional regulator Spx; Reviewed

Probab=96.01  E-value=0.0034  Score=44.86  Aligned_cols=37  Identities=19%  Similarity=0.340  Sum_probs=32.3

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++..++.++.
T Consensus         7 ~~~C~~C~ka~~~L~~~gi~~~~idi~~~~~~~~eL~~   44 (131)
T PRK01655          7 SPSCTSCRKAKAWLEEHDIPFTERNIFSSPLTIDEIKQ   44 (131)
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEeeccCChhhHHHHHH
Confidence            38899999999999999999999 99998887666543

>PRK10329 glutaredoxin-like protein; Provisional

Probab=95.77  E-value=0.0054  Score=40.35  Aligned_cols=33  Identities=12%  Similarity=0.266  Sum_probs=28.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHE   48 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~   48 (118)
                      .|.|++++++.+.|.+.|++|+. ||-+|++.++
T Consensus         8 ~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~   41 (81)
T PRK10329          8 RNDCVQCHATKRAMESRGFDFEMINVDRVPEAAE   41 (81)
T ss_pred             CCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHH
Confidence            48899999999999999999999 9998765433

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=95.77  E-value=0.014  Score=37.54  Aligned_cols=36  Identities=25%  Similarity=0.335  Sum_probs=32.3

Q ss_pred             hhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           71 VKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        71 i~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      -++++|+||.+     |.|.+++++.++|+++| .|...||-
T Consensus         5 ~~~~~V~ly~~-----~~Cp~C~~ak~~L~~~gi~y~~idi~   41 (79)
T TIGR02190         5 RKPESVVVFTK-----PGCPFCAKAKATLKEKGYDFEEIPLG   41 (79)
T ss_pred             CCCCCEEEEEC-----CCCHhHHHHHHHHHHcCCCcEEEECC
Confidence            35788999988     89999999999999999 99999974

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=95.76  E-value=0.005  Score=42.70  Aligned_cols=38  Identities=21%  Similarity=0.322  Sum_probs=32.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPT   53 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~y   53 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++..++.++..
T Consensus         7 ~~~C~~c~ka~~~L~~~gi~~~~idi~~~~~~~~el~~~   45 (115)
T cd03032           7 SPSCSSCRKAKQWLEEHQIPFEERNLFKQPLTKEELKEI   45 (115)
T ss_pred             CCCCHHHHHHHHHHHHCCCceEEEecCCCcchHHHHHHH
Confidence            38899999999999999999999 999988776666543

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=95.70  E-value=0.0056  Score=41.47  Aligned_cols=39  Identities=26%  Similarity=0.427  Sum_probs=33.7

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS   54 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys   54 (118)
                      .|.|++++++.+.|+++|++|.. |+.+++...+.++...
T Consensus         6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~~l~~~~   45 (105)
T cd02977           6 NPNCSTSRKALAWLEEHGIEYEFIDYLKEPPTKEELKELL   45 (105)
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEEeeccCCCCHHHHHHHH
Confidence            37899999999999999999999 9999888777666544

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family

Probab=95.49  E-value=0.0068  Score=42.11  Aligned_cols=36  Identities=25%  Similarity=0.407  Sum_probs=32.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++.+++.+.
T Consensus         6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~   42 (117)
T TIGR01617         6 SPNCTTCKKARRWLEANGIEYQFIDIGEDGPTREELL   42 (117)
T ss_pred             CCCCHHHHHHHHHHHHcCCceEEEecCCChhhHHHHH
Confidence            48899999999999999999999 9999888766654

This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=95.46  E-value=0.0073  Score=41.65  Aligned_cols=36  Identities=14%  Similarity=0.153  Sum_probs=31.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|+.++++.+.|.++|++|.. |+.++|-+.+.++
T Consensus         6 ~~~C~~crka~~~L~~~~i~~~~~di~~~p~s~~eL~   42 (105)
T cd03035           6 IKNCDTVKKARKWLEARGVAYTFHDYRKDGLDAATLE   42 (105)
T ss_pred             CCCCHHHHHHHHHHHHcCCCeEEEecccCCCCHHHHH
Confidence            48999999999999999999999 9999876554443

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=95.45  E-value=0.0057  Score=44.98  Aligned_cols=49  Identities=18%  Similarity=0.228  Sum_probs=39.5

Q ss_pred             eecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcc----cCCCh
Q 033504           10 FKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSK----VDASG   60 (118)
Q Consensus        10 mKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~----wpT~p   60 (118)
                      |+|...  -|.+.+++.++|++++|+|.. ||..|++.++.++....    |+|.|
T Consensus         9 l~giR~--t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvP   62 (147)
T cd03031           9 LRGVRK--TFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLP   62 (147)
T ss_pred             CcCCCC--cChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444432  467779999999999999999 99999998888877654    58877

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=95.42  E-value=0.0065  Score=39.52  Aligned_cols=39  Identities=13%  Similarity=0.158  Sum_probs=30.6

Q ss_pred             CCCCchHHHHHHHHH-----cCCCCcc-CCCCCcccccccCCCcc
Q 033504           17 PSARSSRIVSGSLYH-----NGMKYST-DVPNDPDTHEDFRPTSK   55 (118)
Q Consensus        17 P~CgfS~~~v~~l~~-----~~~~~~~-dVl~d~d~r~dlK~ys~   55 (118)
                      |.|++++++.+.|++     .+++|.. ||.+|+..++.++...+
T Consensus         9 ~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~   53 (85)
T PRK11200          9 PGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVG   53 (85)
T ss_pred             CCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHC
Confidence            679999999999999     7899999 99987654445544333

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=95.12  E-value=0.03  Score=35.20  Aligned_cols=33  Identities=12%  Similarity=0.066  Sum_probs=28.6

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +|+||-+     |.|.+++++.++|+++| .|..+||.+
T Consensus         2 ~v~ly~~-----~~C~~C~ka~~~L~~~gi~~~~~di~~   35 (73)
T cd03027           2 RVTIYSR-----LGCEDCTAVRLFLREKGLPYVEINIDI   35 (73)
T ss_pred             EEEEEec-----CCChhHHHHHHHHHHCCCceEEEECCC
Confidence            4666665     79999999999999999 999999864

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>TIGR02180 GRX_euk Glutaredoxin

Probab=95.10  E-value=0.011  Score=37.36  Aligned_cols=45  Identities=7%  Similarity=0.054  Sum_probs=32.1

Q ss_pred             CCCCCchHHHHHHHHHcCCC--Ccc-CCCCCc---ccccccCCCcccCCCh
Q 033504           16 YPSARSSRIVSGSLYHNGMK--YST-DVPNDP---DTHEDFRPTSKVDASG   60 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~--~~~-dVl~d~---d~r~dlK~ys~wpT~p   60 (118)
                      .|.|++++++.++|.+++++  |.. +|-.++   +.++.++...++++.|
T Consensus         6 ~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP   56 (84)
T TIGR02180         6 KSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVP   56 (84)
T ss_pred             CCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCC
Confidence            48999999999999999998  777 777653   2344454444455544

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=95.06  E-value=0.028  Score=34.06  Aligned_cols=27  Identities=15%  Similarity=0.164  Sum_probs=25.1

Q ss_pred             CCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           87 PQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        87 P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      |.|.+.+++.++|++.| .|..+||.+.
T Consensus         7 ~~C~~C~~~~~~L~~~~i~y~~~dv~~~   34 (60)
T PF00462_consen    7 PGCPYCKKAKEFLDEKGIPYEEVDVDED   34 (60)
T ss_dssp             TTSHHHHHHHHHHHHTTBEEEEEEGGGS
T ss_pred             CCCcCHHHHHHHHHHcCCeeeEcccccc
Confidence            88999999999999999 9999999764

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>PRK12559 transcriptional regulator Spx; Provisional

Probab=95.05  E-value=0.01  Score=42.54  Aligned_cols=38  Identities=18%  Similarity=0.299  Sum_probs=32.9

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPT   53 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~y   53 (118)
                      .|.|.+++++.+.|.++|++|.. |+.+++-+++.++..
T Consensus         7 ~~~C~~crkA~~~L~~~gi~~~~~di~~~~~s~~el~~~   45 (131)
T PRK12559          7 TASCASCRKAKAWLEENQIDYTEKNIVSNSMTVDELKSI   45 (131)
T ss_pred             CCCChHHHHHHHHHHHcCCCeEEEEeeCCcCCHHHHHHH
Confidence            38899999999999999999999 999988876666543

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=95.05  E-value=0.032  Score=34.75  Aligned_cols=32  Identities=22%  Similarity=0.361  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           76 VMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        76 vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      |++|-+     |.|.++.++.++|+++| .|..+||.+
T Consensus         2 i~ly~~-----~~Cp~C~~ak~~L~~~~i~~~~i~i~~   34 (75)
T cd03418           2 VEIYTK-----PNCPYCVRAKALLDKKGVDYEEIDVDG   34 (75)
T ss_pred             EEEEeC-----CCChHHHHHHHHHHHCCCcEEEEECCC
Confidence            455544     78999999999999999 999999864

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=95.04  E-value=0.01  Score=35.97  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=29.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .+.|++++++...|.+.+++|.. |+-++++.++.+
T Consensus         7 ~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~   42 (74)
T TIGR02196         7 TPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEV   42 (74)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHH
Confidence            47899999999999999999999 998876654443

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=94.97  E-value=0.013  Score=41.11  Aligned_cols=37  Identities=24%  Similarity=0.333  Sum_probs=31.6

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|.-++++.+.|.++|++|+. |+++++-+++.++.
T Consensus         7 ~p~C~~crkA~~~L~~~gi~~~~~d~~~~p~s~~eL~~   44 (113)
T cd03033           7 KPGCANNARQKALLEAAGHEVEVRDLLTEPWTAETLRP   44 (113)
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEeehhcCCCCHHHHHH
Confidence            48899999999999999999999 99998866555543

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=94.84  E-value=0.016  Score=41.47  Aligned_cols=36  Identities=19%  Similarity=0.382  Sum_probs=31.6

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      |.|.-+|++.+.|.++|++|+. |+++++-+++.++.
T Consensus         9 p~Cst~RKA~~~L~~~gi~~~~~d~~~~p~t~~eL~~   45 (126)
T TIGR01616         9 PGCANNARQKAALKASGHDVEVQDILKEPWHADTLRP   45 (126)
T ss_pred             CCCHHHHHHHHHHHHCCCCcEEEeccCCCcCHHHHHH
Confidence            7899999999999999999999 99998876665554

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>PRK13344 spxA transcriptional regulator Spx; Reviewed

Probab=94.84  E-value=0.015  Score=41.75  Aligned_cols=37  Identities=19%  Similarity=0.286  Sum_probs=32.3

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|+.++++.+.|.++|++|+. |+..++-+++.++.
T Consensus         7 ~~~C~~crkA~~~L~~~~i~~~~~d~~~~~~s~~eL~~   44 (132)
T PRK13344          7 ISSCTSCKKAKTWLNAHQLSYKEQNLGKEPLTKEEILA   44 (132)
T ss_pred             CCCCHHHHHHHHHHHHcCCCeEEEECCCCCCCHHHHHH
Confidence            48899999999999999999999 99988877666654

>PRK10026 arsenate reductase; Provisional

Probab=94.79  E-value=0.015  Score=42.63  Aligned_cols=37  Identities=16%  Similarity=0.262  Sum_probs=32.0

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|+-||++.+.|.++|++|+. |+++++-+++.++.
T Consensus         9 ~p~Cst~RKA~~wL~~~gi~~~~~d~~~~ppt~~eL~~   46 (141)
T PRK10026          9 NPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVK   46 (141)
T ss_pred             CCCCHHHHHHHHHHHHCCCCcEEEeeeCCCcCHHHHHH
Confidence            38899999999999999999999 99998876665543

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=94.76  E-value=0.016  Score=41.02  Aligned_cols=37  Identities=22%  Similarity=0.439  Sum_probs=33.0

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|+-++.+...|+++|++|.. |+++++-+++.|+.
T Consensus         8 ~p~C~t~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~   45 (117)
T COG1393           8 NPNCSTCRKALAWLEEHGIEYTFIDYLKTPPSREELKK   45 (117)
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEEEeecCCCCHHHHHH
Confidence            48899999999999999999999 99998887777754

>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=94.74  E-value=0.086  Score=36.73  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=38.3

Q ss_pred             HHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           64 KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        64 ~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .+.+++++.+++||+|-|     +.|-|+.++-++|.+.+ .+..+.+.+
T Consensus         4 ~~~v~~~i~~~~VVifSK-----s~C~~c~~~k~ll~~~~v~~~vvELD~   48 (104)
T KOG1752|consen    4 EAKVRKMISENPVVIFSK-----SSCPYCHRAKELLSDLGVNPKVVELDE   48 (104)
T ss_pred             HHHHHHHhhcCCEEEEEC-----CcCchHHHHHHHHHhCCCCCEEEEccC
Confidence            457999999999999998     58999999999999998 888777654

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=94.67  E-value=0.048  Score=32.64  Aligned_cols=33  Identities=21%  Similarity=0.428  Sum_probs=27.7

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +|++|.+.     .|.+++++..+|++++ .|..+||.+
T Consensus         1 ~v~ly~~~-----~Cp~C~~~~~~L~~~~i~~~~~di~~   34 (72)
T cd02066           1 KVVVFSKS-----TCPYCKRAKRLLESLGIEFEEIDILE   34 (72)
T ss_pred             CEEEEECC-----CCHHHHHHHHHHHHcCCcEEEEECCC
Confidence            46677654     4999999999999999 999999854

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

Probab=94.59  E-value=0.014  Score=39.71  Aligned_cols=56  Identities=9%  Similarity=0.143  Sum_probs=41.8

Q ss_pred             eeeEeeecCCCCCCCCc-hHHHHHHHHHcCCCCcc-CCCCCcccccccCCCccc----CCCh
Q 033504            5 LSNLIFKGIASYPSARS-SRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKV----DASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~Cgf-S~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~w----pT~p   60 (118)
                      +++||+-......+..- ..++..+|...+++|.. ||-.|++.|+.++..+.+    +|.|
T Consensus         1 ~i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvP   62 (92)
T cd03030           1 VIKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPP   62 (92)
T ss_pred             CEEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35677666555555554 33778899999999999 999999999988766543    6655

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=94.35  E-value=0.027  Score=36.96  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=33.0

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCc--ccccccCCCcccCCCh
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDP--DTHEDFRPTSKVDASG   60 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~--d~r~dlK~ys~wpT~p   60 (118)
                      |-|.|+.++.++|+..|++|.. |+-.++  +.++.++..+...|.|
T Consensus         9 ~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP   55 (80)
T COG0695           9 PGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVP   55 (80)
T ss_pred             CCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcC
Confidence            5599999999999999999999 998877  4445554443333433

>PRK10853 putative reductase; Provisional

Probab=94.02  E-value=0.028  Score=39.61  Aligned_cols=36  Identities=17%  Similarity=0.135  Sum_probs=30.6

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|+-|+++.+.|.++|++|+. |+.+++-+.+.++
T Consensus         7 ~~~C~t~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~   43 (118)
T PRK10853          7 IKNCDTIKKARRWLEAQGIDYRFHDYRVDGLDSELLQ   43 (118)
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEeehccCCcCHHHHH
Confidence            47899999999999999999999 9998776554443

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=94.00  E-value=0.078  Score=33.36  Aligned_cols=32  Identities=22%  Similarity=0.298  Sum_probs=27.3

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      ||++|.+     +.|++++++.++|++.+ .|..+||-
T Consensus         1 ~v~~y~~-----~~Cp~C~~~~~~l~~~~~~~~~~~v~   33 (82)
T cd03419           1 PVVVFSK-----SYCPYCKRAKSLLKELGVKPAVVELD   33 (82)
T ss_pred             CEEEEEc-----CCCHHHHHHHHHHHHcCCCcEEEEEe
Confidence            4666664     78999999999999999 99988874

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=93.86  E-value=0.087  Score=32.90  Aligned_cols=33  Identities=24%  Similarity=0.327  Sum_probs=28.7

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +|++|.+     |.|.|+.++.++|+++| .|...||-+
T Consensus         2 ~v~lys~-----~~Cp~C~~ak~~L~~~~i~~~~~~v~~   35 (72)
T cd03029           2 SVSLFTK-----PGCPFCARAKAALQENGISYEEIPLGK   35 (72)
T ss_pred             eEEEEEC-----CCCHHHHHHHHHHHHcCCCcEEEECCC
Confidence            5677766     78999999999999999 999999854

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>PRK10638 glutaredoxin 3; Provisional

Probab=93.83  E-value=0.1  Score=33.73  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=27.5

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      +|.+|-     .|.|.|++++.++|+++| .|..+||.
T Consensus         3 ~v~ly~-----~~~Cp~C~~a~~~L~~~gi~y~~~dv~   35 (83)
T PRK10638          3 NVEIYT-----KATCPFCHRAKALLNSKGVSFQEIPID   35 (83)
T ss_pred             cEEEEE-----CCCChhHHHHHHHHHHcCCCcEEEECC
Confidence            466665     467999999999999999 99999984

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=93.66  E-value=0.039  Score=33.34  Aligned_cols=35  Identities=23%  Similarity=0.457  Sum_probs=27.7

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .+.|++++++..+|.+.+++|.. |+-.+++.++.+
T Consensus         7 ~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~   42 (73)
T cd02976           7 KPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEEL   42 (73)
T ss_pred             CCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHH
Confidence            46799999999999999999998 886655444443

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=93.63  E-value=0.038  Score=38.28  Aligned_cols=36  Identities=22%  Similarity=0.309  Sum_probs=30.9

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|+-++++.+.|+++|++|.. |+.+++-+.+.++
T Consensus         6 ~~~C~t~rkA~~~L~~~~i~~~~~di~~~~~t~~el~   42 (112)
T cd03034           6 NPRCSKSRNALALLEEAGIEPEIVEYLKTPPTAAELR   42 (112)
T ss_pred             CCCCHHHHHHHHHHHHCCCCeEEEecccCCcCHHHHH
Confidence            48899999999999999999999 9998876555544

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=92.86  E-value=0.081  Score=36.50  Aligned_cols=27  Identities=15%  Similarity=0.322  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus         6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~   33 (111)
T cd03036           6 YPKCSTCRKAKKWLDEHGVDYTAIDIVE   33 (111)
T ss_pred             CCCCHHHHHHHHHHHHcCCceEEecccC
Confidence            478999999999999999 999999864

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=92.74  E-value=0.052  Score=33.53  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=26.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPD   45 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d   45 (118)
                      .+.|++++++...|.+++++|.. |+-++++
T Consensus         7 ~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~   37 (77)
T TIGR02200         7 TTWCGYCAQLMRTLDKLGAAYEWVDIEEDEG   37 (77)
T ss_pred             CCCChhHHHHHHHHHHcCCceEEEeCcCCHh
Confidence            37899999999999999999998 9876654

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>TIGR00014 arsC arsenate reductase (glutaredoxin)

Probab=92.73  E-value=0.062  Score=37.36  Aligned_cols=36  Identities=19%  Similarity=0.299  Sum_probs=31.0

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|.-++++.+.|.++|++|.. |+.++|-+.+.++
T Consensus         6 ~~~C~t~rkA~~~L~~~~i~~~~~di~~~p~t~~el~   42 (114)
T TIGR00014         6 NPRCSKSRNTLALLEDKGIEPEVVKYLKNPPTKSELE   42 (114)
T ss_pred             CCCCHHHHHHHHHHHHCCCCeEEEeccCCCcCHHHHH
Confidence            48899999999999999999999 9998877655554

composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.

>TIGR02183 GRXA Glutaredoxin, GrxA family

Probab=92.49  E-value=0.063  Score=35.24  Aligned_cols=29  Identities=7%  Similarity=0.051  Sum_probs=23.1

Q ss_pred             CCCCCchHHHHHHHHHcC-----CCCcc-CCCCCc
Q 033504           16 YPSARSSRIVSGSLYHNG-----MKYST-DVPNDP   44 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~-----~~~~~-dVl~d~   44 (118)
                      .|.|+|++++.+.|.+.+     ++|.. ||..+.
T Consensus         7 ~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~   41 (86)
T TIGR02183         7 RPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEG   41 (86)
T ss_pred             CCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCH
Confidence            379999999999999985     45666 777654

This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=92.35  E-value=0.14  Score=32.41  Aligned_cols=27  Identities=19%  Similarity=0.277  Sum_probs=24.5

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.++.++.++|+++| .|..+||.+
T Consensus         6 ~~~Cp~C~~a~~~L~~~~i~~~~~di~~   33 (79)
T TIGR02181         6 KPYCPYCTRAKALLSSKGVTFTEIRVDG   33 (79)
T ss_pred             cCCChhHHHHHHHHHHcCCCcEEEEecC
Confidence            478999999999999999 999999854

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised

Probab=91.90  E-value=0.03  Score=38.73  Aligned_cols=49  Identities=12%  Similarity=0.186  Sum_probs=31.2

Q ss_pred             eeEeeecCCCCCCCCc-hHHHHHHHHHcCCCCcc-CCCCCcccccccCCCc
Q 033504            6 SNLIFKGIASYPSARS-SRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS   54 (118)
Q Consensus         6 ~~lfmKG~~~~P~Cgf-S~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys   54 (118)
                      +.||.-++-..++=.- ..++..+|..++++|+. ||..|++.|+..+...
T Consensus         3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~   53 (99)
T PF04908_consen    3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENA   53 (99)
T ss_dssp             EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT
T ss_pred             EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhc
Confidence            4455544444333221 34789999999999999 9999999888887544

SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=91.71  E-value=0.15  Score=35.27  Aligned_cols=28  Identities=21%  Similarity=0.177  Sum_probs=25.4

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      .|.|.+++++.+.|+++| .|...|+.+-
T Consensus         7 ~~~C~~c~ka~~~L~~~gi~~~~idi~~~   35 (115)
T cd03032           7 SPSCSSCRKAKQWLEEHQIPFEERNLFKQ   35 (115)
T ss_pred             CCCCHHHHHHHHHHHHCCCceEEEecCCC
Confidence            578999999999999999 9999998653

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=91.69  E-value=0.64  Score=32.35  Aligned_cols=37  Identities=14%  Similarity=0.095  Sum_probs=28.5

Q ss_pred             ceeeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCc
Q 033504            3 RSLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDP   44 (118)
Q Consensus         3 ~~~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~   44 (118)
                      +.=+|+|-|     +.|.|+.++-.+|...++.+.. .+-+++
T Consensus        13 ~~~VVifSK-----s~C~~c~~~k~ll~~~~v~~~vvELD~~~   50 (104)
T KOG1752|consen   13 ENPVVIFSK-----SSCPYCHRAKELLSDLGVNPKVVELDEDE   50 (104)
T ss_pred             cCCEEEEEC-----CcCchHHHHHHHHHhCCCCCEEEEccCCC
Confidence            344778877     7899999999999999988776 544443

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=91.56  E-value=0.16  Score=34.21  Aligned_cols=27  Identities=19%  Similarity=0.332  Sum_probs=24.9

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus         6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~   33 (105)
T cd02977           6 NPNCSTSRKALAWLEEHGIEYEFIDYLK   33 (105)
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence            478999999999999999 999999965

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []

Probab=91.45  E-value=0.082  Score=36.18  Aligned_cols=35  Identities=26%  Similarity=0.451  Sum_probs=24.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .|.|+-++++.+.|.++|++|.. |+.+++-+++.+
T Consensus         3 ~~~C~t~rka~~~L~~~gi~~~~~d~~k~p~s~~el   38 (110)
T PF03960_consen    3 NPNCSTCRKALKWLEENGIEYEFIDYKKEPLSREEL   38 (110)
T ss_dssp             -TT-HHHHHHHHHHHHTT--EEEEETTTS---HHHH
T ss_pred             CCCCHHHHHHHHHHHHcCCCeEeehhhhCCCCHHHH
Confidence            48899999999999999999999 999877654444

This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....

>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins

Probab=90.98  E-value=0.17  Score=32.13  Aligned_cols=29  Identities=14%  Similarity=0.202  Sum_probs=24.7

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDP   44 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~   44 (118)
                      .|-|+|++++...|...|++|.. +|..++
T Consensus         7 ~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~   36 (77)
T cd03041           7 FEGSPFCRLVREVLTELELDVILYPCPKGS   36 (77)
T ss_pred             CCCCchHHHHHHHHHHcCCcEEEEECCCCh
Confidence            46789999999999999999998 886543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=90.87  E-value=0.21  Score=34.28  Aligned_cols=27  Identities=15%  Similarity=0.189  Sum_probs=25.3

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|+-++++.+.|+++| .|...|+.+
T Consensus         6 ~~~C~~crka~~~L~~~~i~~~~~di~~   33 (105)
T cd03035           6 IKNCDTVKKARKWLEARGVAYTFHDYRK   33 (105)
T ss_pred             CCCCHHHHHHHHHHHHcCCCeEEEeccc
Confidence            589999999999999999 999999975

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=90.67  E-value=0.23  Score=31.09  Aligned_cols=27  Identities=11%  Similarity=0.069  Sum_probs=24.3

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||-+
T Consensus         6 ~~~Cp~C~~ak~~L~~~~i~~~~~di~~   33 (72)
T TIGR02194         6 KNNCVQCKMTKKALEEHGIAFEEINIDE   33 (72)
T ss_pred             CCCCHHHHHHHHHHHHCCCceEEEECCC
Confidence            468999999999999999 999999863

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins

Probab=90.42  E-value=0.98  Score=30.59  Aligned_cols=54  Identities=15%  Similarity=0.213  Sum_probs=39.0

Q ss_pred             eeeEeeecCCCC---CCCCchHHHHHHHHHcCCCCcc-CC--CCCcccccccCCCcccCC
Q 033504            5 LSNLIFKGIASY---PSARSSRIVSGSLYHNGMKYST-DV--PNDPDTHEDFRPTSKVDA   58 (118)
Q Consensus         5 ~~~lfmKG~~~~---P~CgfS~~~v~~l~~~~~~~~~-dV--l~d~d~r~dlK~ys~wpT   58 (118)
                      -+-||+|..+..   .-|.|++++.=+|...|++|+. +|  ...|+-.-.+.|+...|+
T Consensus         5 ~~el~vka~~~~~~~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~g~vPv   64 (91)
T cd03061           5 EIELFVKASSDGESIGNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPGTQPPF   64 (91)
T ss_pred             cEEEEEEeccCCCCCCCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCCCCCCE
Confidence            355788876544   4599999999999999999987 55  444544445566666665

They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI

>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=89.20  E-value=0.44  Score=27.69  Aligned_cols=27  Identities=26%  Similarity=0.281  Sum_probs=22.8

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPND   43 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d   43 (118)
                      |.|++++++.-+|...|++|.. ++-.+
T Consensus         7 ~~~~~~~~~~~~l~~~~i~~~~~~~~~~   34 (71)
T cd00570           7 PGSPRSLRVRLALEEKGLPYELVPVDLG   34 (71)
T ss_pred             CCCccHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4599999999999999999988 66543

In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma

>PRK10329 glutaredoxin-like protein; Provisional

Probab=88.66  E-value=0.43  Score=31.19  Aligned_cols=28  Identities=11%  Similarity=0.090  Sum_probs=24.9

Q ss_pred             CCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           85 EFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        85 ~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ..|.|.+++++-+.|.+.| .|+..||.+
T Consensus         7 t~~~Cp~C~~ak~~L~~~gI~~~~idi~~   35 (81)
T PRK10329          7 TRNDCVQCHATKRAMESRGFDFEMINVDR   35 (81)
T ss_pred             eCCCCHhHHHHHHHHHHCCCceEEEECCC
Confidence            3578999999999999999 999999863

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=88.12  E-value=0.52  Score=39.61  Aligned_cols=35  Identities=9%  Similarity=0.163  Sum_probs=29.6

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcc
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPD   45 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d   45 (118)
                      |++|-|     |.|++..++.+.|.++|++|.. ||-+|++
T Consensus         4 V~vys~-----~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~   39 (410)
T PRK12759          4 VRIYTK-----TNCPFCDLAKSWFGANDIPFTQISLDDDVK   39 (410)
T ss_pred             EEEEeC-----CCCHHHHHHHHHHHHCCCCeEEEECCCChh
Confidence            455544     8899999999999999999999 9987664

>TIGR02180 GRX_euk Glutaredoxin

Probab=86.84  E-value=0.75  Score=28.72  Aligned_cols=26  Identities=15%  Similarity=0.202  Sum_probs=23.2

Q ss_pred             CCCCcchHHHHHHHHhcC-C--cceeehh
Q 033504           86 FPQCGFSSLAVRVLGAYS-K--FSYFCSF  111 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~--~~~~dv~  111 (118)
                      .|.|.+++++.++|++++ .  |..+||-
T Consensus         6 ~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~   34 (84)
T TIGR02180         6 KSYCPYCKKAKEILAKLNVKPAYEVVELD   34 (84)
T ss_pred             CCCChhHHHHHHHHHHcCCCCCCEEEEee
Confidence            478999999999999999 6  8888874

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=86.41  E-value=0.65  Score=33.12  Aligned_cols=28  Identities=14%  Similarity=0.061  Sum_probs=25.6

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      .|.|.=++++.+.|+++| .|.+.|+++-
T Consensus         8 ~p~Cst~RKA~~~L~~~gi~~~~~d~~~~   36 (126)
T TIGR01616         8 KPGCANNARQKAALKASGHDVEVQDILKE   36 (126)
T ss_pred             CCCCHHHHHHHHHHHHCCCCcEEEeccCC
Confidence            478999999999999999 9999999764

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=86.15  E-value=0.68  Score=32.30  Aligned_cols=28  Identities=14%  Similarity=0.095  Sum_probs=25.6

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      .|.|.-++++.+.|+++| .|...|+++-
T Consensus         7 ~p~C~~crkA~~~L~~~gi~~~~~d~~~~   35 (113)
T cd03033           7 KPGCANNARQKALLEAAGHEVEVRDLLTE   35 (113)
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEeehhcC
Confidence            589999999999999999 9999999763

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>PRK10026 arsenate reductase; Provisional

Probab=84.88  E-value=0.77  Score=33.56  Aligned_cols=27  Identities=15%  Similarity=0.271  Sum_probs=25.1

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.=|+++.+.|+++| .|.+.|+++
T Consensus         9 ~p~Cst~RKA~~wL~~~gi~~~~~d~~~   36 (141)
T PRK10026          9 NPACGTSRNTLEMIRNSGTEPTIIHYLE   36 (141)
T ss_pred             CCCCHHHHHHHHHHHHCCCCcEEEeeeC
Confidence            588999999999999999 999999875

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=84.01  E-value=0.96  Score=31.92  Aligned_cols=27  Identities=15%  Similarity=0.322  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|+=++.+.+.|+++| .|...|+++
T Consensus         8 ~p~C~t~rka~~~L~~~gi~~~~~~y~~   35 (117)
T COG1393           8 NPNCSTCRKALAWLEEHGIEYTFIDYLK   35 (117)
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEEEeec
Confidence            588999999999999999 999999874

>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=83.37  E-value=1.6  Score=26.66  Aligned_cols=25  Identities=20%  Similarity=0.271  Sum_probs=21.9

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DV   40 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dV   40 (118)
                      .|.|++++++.-+|...|++|+. +|
T Consensus         6 ~~~~~~~~~v~~~l~~~gi~~e~~~i   31 (74)
T cd03045           6 LPGSPPCRAVLLTAKALGLELNLKEV   31 (74)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCEEEEe
Confidence            47899999999999999999987 55

GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=83.28  E-value=1.1  Score=30.96  Aligned_cols=27  Identities=19%  Similarity=0.182  Sum_probs=24.9

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.=++++.+.|+++| .|.+.|+.+
T Consensus         6 ~~~C~t~rkA~~~L~~~~i~~~~~di~~   33 (112)
T cd03034           6 NPRCSKSRNALALLEEAGIEPEIVEYLK   33 (112)
T ss_pred             CCCCHHHHHHHHHHHHCCCCeEEEeccc
Confidence            478999999999999999 999999865

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=82.75  E-value=1.3  Score=28.43  Aligned_cols=27  Identities=15%  Similarity=0.283  Sum_probs=22.9

Q ss_pred             CCCCcchHHHHHHHHh-----cC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGA-----YS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~-----~~-~~~~~dv~~  112 (118)
                      .|.|++.+++.+.|++     .+ .|...||-+
T Consensus         8 ~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~   40 (85)
T PRK11200          8 RPGCPYCVRAKELAEKLSEERDDFDYRYVDIHA   40 (85)
T ss_pred             CCCChhHHHHHHHHHhhcccccCCcEEEEECCC
Confidence            3579999999999999     67 888888853

>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2

Probab=82.62  E-value=0.91  Score=28.27  Aligned_cols=24  Identities=21%  Similarity=0.241  Sum_probs=22.0

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DV   40 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dV   40 (118)
                      +.|+|++++...|...|++|+. ++
T Consensus         8 ~~~p~c~kv~~~L~~~gi~y~~~~~   32 (77)
T cd03040           8 KTCPFCCKVRAFLDYHGIPYEVVEV   32 (77)
T ss_pred             CCCHHHHHHHHHHHHCCCceEEEEC
Confidence            6799999999999999999998 66

Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.

>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs

Probab=81.99  E-value=1.9  Score=26.56  Aligned_cols=26  Identities=12%  Similarity=0.138  Sum_probs=22.4

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVP   41 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl   41 (118)
                      .+-|+||+++.-+|...|++|+. +|-
T Consensus         6 ~~~~p~~~rv~~~L~~~gl~~e~~~v~   32 (71)
T cd03060           6 FRRCPYAMRARMALLLAGITVELREVE   32 (71)
T ss_pred             cCCCcHHHHHHHHHHHcCCCcEEEEeC
Confidence            46799999999999999999987 543

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=81.66  E-value=2.6  Score=27.36  Aligned_cols=26  Identities=19%  Similarity=0.315  Sum_probs=22.9

Q ss_pred             CCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           87 PQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        87 P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      |-|.|.+++-++|++.| +|...|+-+
T Consensus         9 ~~CPyC~~ak~~L~~~g~~~~~i~~~~   35 (80)
T COG0695           9 PGCPYCKRAKRLLDRKGVDYEEIDVDD   35 (80)
T ss_pred             CCCchHHHHHHHHHHcCCCcEEEEecC
Confidence            44999999999999999 999988754

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=81.11  E-value=1.8  Score=25.69  Aligned_cols=26  Identities=19%  Similarity=0.269  Sum_probs=22.9

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      .+.|+++.++..+|++.+ .|..+|+.
T Consensus         7 ~~~c~~c~~~~~~l~~~~i~~~~~~i~   33 (73)
T cd02976           7 KPDCPYCKATKRFLDERGIPFEEVDVD   33 (73)
T ss_pred             CCCChhHHHHHHHHHHCCCCeEEEeCC
Confidence            357999999999999999 99998874

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=81.03  E-value=1.7  Score=26.47  Aligned_cols=26  Identities=15%  Similarity=0.353  Sum_probs=23.2

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      .+.|++++++...|++.+ .|...|+-
T Consensus         7 ~~~C~~C~~~~~~L~~~~~~~~~idi~   33 (77)
T TIGR02200         7 TTWCGYCAQLMRTLDKLGAAYEWVDIE   33 (77)
T ss_pred             CCCChhHHHHHHHHHHcCCceEEEeCc
Confidence            368999999999999999 99998875

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=80.45  E-value=1.8  Score=25.70  Aligned_cols=27  Identities=19%  Similarity=0.080  Sum_probs=23.7

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .+.|++++++...|++.+ .|...||-+
T Consensus         7 ~~~C~~C~~~~~~l~~~~i~~~~vdi~~   34 (74)
T TIGR02196         7 TPWCPPCKKAKEYLTSKGIAFEEIDVEK   34 (74)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeccC
Confidence            467999999999999999 999998854

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	118
1yka_A	115	Solution Structure Of Grx4, A Monothiol Glutaredoxi		2e-07
2wci_A	135	Structure Of E. Coli Monothiol Glutaredoxin Grx4 Ho		2e-07
3gx8_A	121	Structural And Biochemical Characterization Of Yeas		3e-06
2lku_A	109	Solution Structure Of Reduced Poplar Apo Grxs14 Len		1e-04
3ipz_A	109	Crystal Structure Of Arabidopsis Monothiol Glutared		2e-04
2wul_A	118	Crystal Structure Of The Human Glutaredoxin 5 With		3e-04
3zyw_A	111	Crystal Structure Of The First Glutaredoxin Domain		3e-04

>pdb|1YKA|A Chain A, Solution Structure Of Grx4, A Monothiol Glutaredoxin From E. Coli Length = 115

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 6   EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 49

>pdb|2WCI|A Chain A, Structure Of E. Coli Monothiol Glutaredoxin Grx4 Homodimer Length = 135

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 65  EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY-SKFSY 107
           E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A   +F+Y
Sbjct: 26  EKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAY 69

>pdb|3GX8|A Chain A, Structural And Biochemical Characterization Of Yeast Monothiol Glutaredoxin Grx5 Length = 121

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 62  SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLG 100
            +++ +E  ++  PV+L+MKG PEFP+CGFS   + +LG
Sbjct: 4   EIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLG 42

>pdb|2LKU|A Chain A, Solution Structure Of Reduced Poplar Apo Grxs14 Length = 109

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
          +LK  +++ V  + V+L+MKG  +FPQCGFS   V++L
Sbjct: 6  ALKTTLDKVVTSHKVVLFMKGTKDFPQCGFSQTVVQIL 43

>pdb|3IPZ|A Chain A, Crystal Structure Of Arabidopsis Monothiol Glutaredoxin Atgr Length = 109

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
           LK+ +E+ V    V+L+MKG  +FP CGFS+  V++L
Sbjct: 6  QLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQIL 43

>pdb|2WUL|A Chain A, Crystal Structure Of The Human Glutaredoxin 5 With Bound Glutathione In An Fes Cluster Length = 118

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 71  VKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYSKFSY 107
           VK++ V++++KG PE PQCGFS+  V++L  +    Y
Sbjct: 17  VKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDY 53

>pdb|3ZYW|A Chain A, Crystal Structure Of The First Glutaredoxin Domain Of Human Glutaredoxin 3 (Glrx3) Length = 111

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 75  PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS 112
           P ML+MKG P+ P+CGFS   V +L  ++ +FS F  FS
Sbjct: 17  PCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS 55

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	118
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	2e-17
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	2e-17
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	3e-17
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	3e-17
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	4e-17
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	5e-17
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	5e-17
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens} Length = 111

 Score = 70.7 bits (174), Expect = 2e-17
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 62  SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
            L   +++     P ML+MKG P+ P+CGFS   V +L  ++ +FS F
Sbjct: 4   DLNLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSF 51

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A Length = 135

 Score = 71.3 bits (175), Expect = 2e-17
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 45  DTHEDFRPTSKVDASGL--SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY 102
             H     +  V       +  E +++ + ENP++LYMKG P+ P CGFS+ AV+ L A 
Sbjct: 4   SHHHHHHSSGLVPRGSHMSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAAC 63

Query: 103 S-KFSYF 108
             +F+Y 
Sbjct: 64  GERFAYV 70

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1 Length = 109

 Score = 70.4 bits (173), Expect = 3e-17
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 60  GLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
           G S    ++    +  VML+MKG  +  +CGFS   + +L +   ++  F
Sbjct: 1   GSSGSSGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETF 50

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens} Length = 105

 Score = 69.9 bits (172), Expect = 3e-17
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 62  SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
            L+E ++    +  VML+MKG  +  +CGFS   + +L +   ++  F
Sbjct: 5   KLEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETF 52

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} Length = 109

 Score = 70.0 bits (172), Expect = 4e-17
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 62  SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYF 108
            LK+ +E+ V    V+L+MKG  +FP CGFS+  V++L   +  F   
Sbjct: 6   QLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDV 53

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae} Length = 121

 Score = 70.1 bits (172), Expect = 5e-17
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 4/50 (8%)

Query: 63  LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY----SKFSYF 108
           +++ +E  ++  PV+L+MKG PEFP+CGFS   + +LG      +KF+ +
Sbjct: 5   IRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAY 54

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A Length = 116

 Score = 41.1 bits (97), Expect = 6e-06
 Identities = 6/38 (15%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
          +  +  ++     PV+++ K       CG+ +   ++L
Sbjct: 8  AALKKAKELASSAPVVVFSK-----TYCGYCNRVKQLL 40

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 33/129 (25%)

Query: 8   LIFKGIASYPSARSSRIVSGSLYHNGMKYS------TDVPNDPD------------THED 49
            +F  + S       + V   L  N   Y             P              + D
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 50  FRPTSKVDAS----GLSLKEVVEQDVKENPVMLY-MKGVPEFPQCGFSSLAVRVLGAYSK 104
            +  +K + S     L L++ + +      V++  + G       G + +A+ V  +Y  
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG------SGKTWVALDVCLSYKV 176

Query: 105 FSYFCSFSI 113
                 F I
Sbjct: 177 QCKM-DFKI 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	118
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.75
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.51
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.31
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.26
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.26
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.24
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.14
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.13
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.1
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.01
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	98.9
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	98.87
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	98.78
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	98.76
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	98.74
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	98.73
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	98.22
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	97.97
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	97.97
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	97.92
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	97.83
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	97.66
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	97.64
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	97.56
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	97.55
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	97.54
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	97.53
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	97.52
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	97.45
2hyx_A	352	Protein DIPZ; thioredoxin fold, jelly-roll, struct	97.38
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	97.24
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	97.02
1kte_A	105	Thioltransferase; redox-active center, electron tr	97.02
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	96.83
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	96.8
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	96.76
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	96.65
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	96.58
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	96.55
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	96.5
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	96.41
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	96.31
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	96.3
3rdw_A	121	Putative arsenate reductase; structural genomics,	96.26
3gkx_A	120	Putative ARSC family related protein; ARSC family	96.25
1kte_A	105	Thioltransferase; redox-active center, electron tr	96.22
3l78_A	120	Regulatory protein SPX; transcription, transcripti	95.99
3fz4_A	120	Putative arsenate reductase; APC61768, structural	95.95
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	95.9
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	95.88
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	95.81
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	95.8
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	95.72
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	95.68
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	95.58
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	95.56
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	95.53
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	95.5
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	95.39
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	95.24
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	95.16
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	95.07
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	94.67
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	94.58
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	94.51
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	94.42
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	94.07
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	93.67
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	92.97
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	92.94
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	92.88
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	92.78
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	92.74
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	92.66
2fgx_A	107	Putative thioredoxin; NET3, NESG, GFT-glutaredoxin	92.48
3gkx_A	120	Putative ARSC family related protein; ARSC family	92.25
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	92.24
3rdw_A	121	Putative arsenate reductase; structural genomics,	91.96
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	91.8
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	91.42
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	91.22
3fz4_A	120	Putative arsenate reductase; APC61768, structural	90.96
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	90.68
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	89.4
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	89.35
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	89.03
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	88.74
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	88.36
1ttz_A	87	Conserved hypothetical protein; structural genomic	88.3
2hls_A	243	Protein disulfide oxidoreductase; thioredoxin fold	85.61
2hyx_A	352	Protein DIPZ; thioredoxin fold, jelly-roll, struct	85.29
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	82.07

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.75  E-value=7.2e-21  Score=134.08  Aligned_cols=87  Identities=20%  Similarity=0.239  Sum_probs=75.0

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCC-CCcc-CCCCCcccccccCCCcccCCChhhHHHHH-HHHhhcCCeeeeec
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGM-KYST-DVPNDPDTHEDFRPTSKVDASGLSLKEVV-EQDVKENPVMLYMK   81 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~-~~~~-dVl~d~d~r~dlK~ys~wpT~p~~l~~~I-k~li~~~~vvlfmK   81 (118)
                      =|||||||||+.|+|+||++++++|.+.|+ +|.+ ||++|++.|+.++.+++|||.|+ +  .| .++|++++.+.-|.
T Consensus        21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPq-I--FI~g~~IGG~Ddl~~l~   97 (118)
T 2wul_A           21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQ-V--YLNGEFVGGCDILLQMH   97 (118)
T ss_dssp             SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCE-E--EETTEEEECHHHHHHHH
T ss_pred             CEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhccCCCCCe-E--eECCEEECCHHHHHHHH
Confidence            379999999999999999999999999999 6999 99999999999999999999993 4  33 25666666666666


Q ss_pred             CCCCCCCCcchHHHHHHHHhcC
Q 033504           82 GVPEFPQCGFSSLAVRVLGAYS  103 (118)
Q Consensus        82 Gtp~~P~CgFS~~~v~iL~~~~  103 (118)
                      -         |+++.++|++.|
T Consensus        98 ~---------~GeL~~lL~~~G  110 (118)
T 2wul_A           98 Q---------NGDLVEELKKLG  110 (118)
T ss_dssp             H---------HTHHHHHHHHTT
T ss_pred             H---------CCCHHHHHHHcC
Confidence            6         778888998888

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.51  E-value=1.3e-14  Score=102.04  Aligned_cols=50  Identities=32%  Similarity=0.648  Sum_probs=46.9

Q ss_pred             HHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC--Ccceeehhh
Q 033504           63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS--KFSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~--~~~~~dv~~  112 (118)
                      ..++|+++|++++||+||||||+.|+|+||++++++|+++|  .|..+||++
T Consensus         9 ~~e~i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~   60 (118)
T 2wul_A            9 SAEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD   60 (118)
T ss_dssp             CHHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS
T ss_pred             hHHHHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC
Confidence            46799999999999999999999999999999999999999  599999865

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.31  E-value=1.9e-14  Score=100.33  Aligned_cols=56  Identities=25%  Similarity=0.400  Sum_probs=53.4

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCC---Ccc-CCCCCcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMK---YST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~---~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      =++||+||||+.|.|+|++++.++|.++|++   |.. ||.+|++.++.++..++|+|.|
T Consensus        17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP   76 (121)
T 3gx8_A           17 PVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIP   76 (121)
T ss_dssp             SEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSC
T ss_pred             CEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCC
Confidence            3799999999999999999999999999999   888 9999999999999999999988

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.26  E-value=7.6e-13  Score=90.77  Aligned_cols=57  Identities=18%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             eeeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            4 SLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         4 ~~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      .=+|||+||||+.|.|+|++++.++|.++|++|.. ||.+|++.++.++.+++|+|.|
T Consensus        16 ~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP   73 (111)
T 3zyw_A           16 APCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYP   73 (111)
T ss_dssp             SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCCSSC
T ss_pred             CCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHCCCCCC
Confidence            34899999999999999999999999999999999 9999999999999999999988

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.24  E-value=1e-11  Score=85.11  Aligned_cols=51  Identities=39%  Similarity=0.679  Sum_probs=48.7

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++.++|+++|++++|++|+||||+.|.|+|++++.++|+++| .|..+||.+
T Consensus         4 ~~~~~v~~~i~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~   55 (111)
T 3zyw_A            4 DLNLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS   55 (111)
T ss_dssp             CHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred             HHHHHHHHHHhcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC
Confidence            578899999999999999999999999999999999999999 999999964

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.14  E-value=7.1e-11  Score=80.16  Aligned_cols=52  Identities=35%  Similarity=0.641  Sum_probs=49.2

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .++.++|+++|++++|++|+||||+.|.|+|++++.++|+++| .|..+||.+
T Consensus         5 ~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~   57 (109)
T 3ipz_A            5 PQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILE   57 (109)
T ss_dssp             HHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred             HHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCC
Confidence            3678899999999999999999999999999999999999999 999999964

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.13  E-value=5.9e-11  Score=82.48  Aligned_cols=52  Identities=35%  Similarity=0.837  Sum_probs=47.7

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-C---cceeehhh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-K---FSYFCSFS  112 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~---~~~~dv~~  112 (118)
                      +++.++|+++|++++|++|+||||+.|.|+|++++.++|+++| .   |..+||.+
T Consensus         3 ~~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~   58 (121)
T 3gx8_A            3 TEIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLE   58 (121)
T ss_dssp             HHHHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTT
T ss_pred             HHHHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecC
Confidence            3578899999999999999999999999999999999999999 8   78888753

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.10  E-value=1.1e-11  Score=84.12  Aligned_cols=56  Identities=14%  Similarity=0.172  Sum_probs=53.3

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      =++||+||||+.|.|+|++++.++|.++|++|.. ||.+|++.++.++.+++|++.|
T Consensus        19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP   75 (109)
T 3ipz_A           19 KVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFP   75 (109)
T ss_dssp             SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCSSSC
T ss_pred             CEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCCCCC
Confidence            4789999999999999999999999999999999 9999999999999999999988

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=98.90  E-value=1.9e-10  Score=81.79  Aligned_cols=55  Identities=20%  Similarity=0.253  Sum_probs=52.7

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      ++||+||+|..|.|+|++++.++|.++|++|.. ||.+|++.++.++..++|+|.|
T Consensus        37 Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP   92 (135)
T 2wci_A           37 ILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANWPTFP   92 (135)
T ss_dssp             EEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGGCHHHHHHHHHHHTCCSSC
T ss_pred             EEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCCCHHHHHHHHHHHCCCCcC
Confidence            789999999999999999999999999999999 9999999999999989999988

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.87  E-value=6.6e-10  Score=74.86  Aligned_cols=55  Identities=20%  Similarity=0.268  Sum_probs=51.3

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|++|+|..|.|+|++++.++|.++|++|.. ||.+|++.++.++..++|++.|
T Consensus        17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP   72 (109)
T 1wik_A           17 VMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYP   72 (109)
T ss_dssp             EEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhCCCCCC
Confidence            789999999999999999999999999999999 9999998888888888888877

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=98.78  E-value=1.1e-08  Score=68.18  Aligned_cols=52  Identities=27%  Similarity=0.482  Sum_probs=48.7

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +++.+.++++++.++|++|.+|+|..|.|++++++..+|++.+ .|..+||.+
T Consensus         4 ~~~~~~~~~~i~~~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~   56 (105)
T 2yan_A            4 PKLEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE   56 (105)
T ss_dssp             HHHHHHHHHHHTSSSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred             HHHHHHHHHHhccCCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC
Confidence            4677899999999999999999999999999999999999999 999999964

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=98.76  E-value=1.5e-09  Score=72.40  Aligned_cols=55  Identities=20%  Similarity=0.271  Sum_probs=50.6

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+|+|..|.|++++++.++|.+++++|.. ||.+|++.++.++..++|++.|
T Consensus        19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP   74 (105)
T 2yan_A           19 VMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYP   74 (105)
T ss_dssp             EEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCCSSC
T ss_pred             EEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHHHCCCCCC
Confidence            678999999999999999999999999999999 9999988888888777888877

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=98.74  E-value=1.3e-08  Score=72.28  Aligned_cols=51  Identities=41%  Similarity=0.857  Sum_probs=48.5

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++.+.|+++++.++|++|++|+|+.|.|+|++++.++|+++| .|..+||..
T Consensus        23 ~~~~~v~~~i~~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~   74 (135)
T 2wci_A           23 TTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ   74 (135)
T ss_dssp             HHHHHHHHHHHHCSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG
T ss_pred             HHHHHHHHHhccCCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC
Confidence            578899999999999999999999999999999999999999 999999964

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.73  E-value=4.9e-09  Score=70.54  Aligned_cols=50  Identities=24%  Similarity=0.421  Sum_probs=46.0

Q ss_pred             HHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +.+.++++++.++|++|++|+|+.|.|+|++++.++|+++| .|..+||.+
T Consensus         4 ~~~~~~~~i~~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~   54 (109)
T 1wik_A            4 GSSGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE   54 (109)
T ss_dssp             SCCCHHHHHTTSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS
T ss_pred             HHHHHHHHhccCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC
Confidence            44567889999999999999999999999999999999999 999999964

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=98.22  E-value=3.5e-07  Score=58.68  Aligned_cols=54  Identities=6%  Similarity=-0.049  Sum_probs=46.8

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCC-----CCcccccccCCCcccC-----CCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVP-----NDPDTHEDFRPTSKVD-----ASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl-----~d~d~r~dlK~ys~wp-----T~p   60 (118)
                      +++|.+- ++.|.|+|++++.++|+++|++|.. ||.     .|++.++.++..++|+     +.|
T Consensus         2 v~iY~~~-~~~~~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP   66 (87)
T 1aba_A            2 FKVYGYD-SNIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMP   66 (87)
T ss_dssp             EEEEECC-TTTSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSC
T ss_pred             EEEEEeC-CCCCcCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccC
Confidence            4677765 8889999999999999999999999 998     7788888888777887     776

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=97.97  E-value=3.6e-06  Score=54.66  Aligned_cols=50  Identities=14%  Similarity=0.174  Sum_probs=43.1

Q ss_pred             eeEeeecCCCCCCCCch------HHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccC--CCh
Q 033504            6 SNLIFKGIASYPSARSS------RIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVD--ASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS------~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wp--T~p   60 (118)
                      +++|.+     |.|+++      +++.++|.++|++|.. ||..|++.++.++..++||  +.|
T Consensus         4 v~ly~~-----~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP   62 (93)
T 1t1v_A            4 LRVYST-----SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPP   62 (93)
T ss_dssp             EEEEEC-----SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSC
T ss_pred             EEEEEc-----CCCCCchhhHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCC
Confidence            556654     899999      8999999999999999 9999998888888777876  666

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.97  E-value=3.1e-06  Score=57.25  Aligned_cols=50  Identities=10%  Similarity=0.035  Sum_probs=43.5

Q ss_pred             eeEeeecCCCCCCCCchH------HHHHHHHHcCCCCcc-CCCCCcccccccCCCc--------ccCCCh
Q 033504            6 SNLIFKGIASYPSARSSR------IVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS--------KVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~------~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys--------~wpT~p   60 (118)
                      ++||.+     |.|+++.      ++.++|.+++++|.. ||..|++.++.++...        .|+|.|
T Consensus        10 V~vy~~-----~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP   74 (111)
T 2ct6_A           10 IRVFIA-----SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPP   74 (111)
T ss_dssp             EEEEEC-----SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSC
T ss_pred             EEEEEc-----CCCCCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCC
Confidence            567765     7899999      899999999999999 9999999888887663        888888

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=97.92  E-value=1.4e-05  Score=53.81  Aligned_cols=46  Identities=11%  Similarity=0.175  Sum_probs=42.6

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      .+..+.+++++++++|++|.+     |.|+|++++.++|+++| .|..+||.
T Consensus         4 ~~~~~~~~~~i~~~~v~vy~~-----~~Cp~C~~ak~~L~~~~i~~~~~dvd   50 (114)
T 3h8q_A            4 EELRRHLVGLIERSRVVIFSK-----SYCPHSTRVKELFSSLGVECNVLELD   50 (114)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETT
T ss_pred             HHHHHHHHHHhccCCEEEEEc-----CCCCcHHHHHHHHHHcCCCcEEEEec
Confidence            356789999999999999998     79999999999999999 99999986

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=97.83  E-value=2.5e-05  Score=51.87  Aligned_cols=46  Identities=17%  Similarity=0.283  Sum_probs=42.7

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++.+.++++++.++|++|.+     |.|++++++..+|+++| .|..+||..
T Consensus         7 ~~~~~~~~~i~~~~v~vy~~-----~~Cp~C~~~~~~L~~~~i~~~~~di~~   53 (113)
T 3rhb_A            7 RMEESIRKTVTENTVVIYSK-----TWCSYCTEVKTLFKRLGVQPLVVELDQ   53 (113)
T ss_dssp             HHHHHHHHHHHHSSEEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred             HHHHHHHHHHhcCCEEEEEC-----CCChhHHHHHHHHHHcCCCCeEEEeec
Confidence            57789999999999999998     79999999999999999 999999964

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=97.66  E-value=5e-05  Score=50.29  Aligned_cols=51  Identities=10%  Similarity=0.047  Sum_probs=40.1

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCc-ccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS-KVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys-~wpT~p   60 (118)
                      -+++|-|     |.|+|+.++.+.|.+.|++|.. ||-+|++.++.+...+ ...|.|
T Consensus         5 ~I~vYs~-----~~Cp~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP   57 (92)
T 2lqo_A            5 ALTIYTT-----SWCGYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVP   57 (92)
T ss_dssp             CEEEEEC-----TTCSSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSC
T ss_pred             cEEEEcC-----CCCHhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeC
Confidence            3566654     8999999999999999999999 9999988777775543 344444

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=97.64  E-value=3.9e-05  Score=62.57  Aligned_cols=48  Identities=17%  Similarity=0.223  Sum_probs=43.6

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHH-HHHhcC-Ccceeehhhh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVR-VLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~-iL~~~~-~~~~~dv~~~  113 (118)
                      +++.++|+++|+.++|++|+|     |.|+|++++.+ +|+++| .|..+||+++
T Consensus       248 ~~~~~~V~~lI~~~~VvVYsk-----~~CPyC~~Ak~~LL~~~gV~y~eidVlEl  297 (362)
T 2jad_A          248 QETIKHVKDLIAENEIFVASK-----TYCPYSHAALNTLFEKLKVPRSKVLVLQL  297 (362)
T ss_dssp             HHHHHHHHHHHHTCSEEEEEC-----TTCHHHHHHHHHHHTTTCCCTTTEEEEEG
T ss_pred             HHHHHHHHHHhccCCEEEEEc-----CCCcchHHHHHHHHHHcCCCcceEEEEEe
Confidence            467889999999999999999     79999999998 899999 9999999653

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A

Probab=97.56  E-value=3.7e-05  Score=53.90  Aligned_cols=86  Identities=13%  Similarity=0.076  Sum_probs=63.9

Q ss_pred             eeeEeeecCCCCCCCCch------HHHHHHHHHcCCCCcc-CCCCCcccccccCCCc--------ccCCChh--------
Q 033504            5 LSNLIFKGIASYPSARSS------RIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS--------KVDASGL--------   61 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS------~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys--------~wpT~p~--------   61 (118)
                      +++||.     .|.||+.      .++..+|.+.||+|+. ||-.|++.|+.+...+        ..++.|+        
T Consensus         1 ~V~vYt-----t~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~i   75 (121)
T 1u6t_A            1 VIRVYI-----ASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQYR   75 (121)
T ss_dssp             CEEEEE-----CTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEE
T ss_pred             CEEEEe-----cCCCCCccchHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEECCEEE
Confidence            456665     3779987      6999999999999999 9999999998887555        6777773        


Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHH
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLA   95 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~   95 (118)
                      --.+.+.++...+++--++++.|....+..+..+
T Consensus        76 GG~Dd~~~l~e~g~L~~lL~~~~~~~~~e~~~~~  109 (121)
T 1u6t_A           76 GDYDAFFEARENNAVYAFLGLTAPPGSKEAEVQA  109 (121)
T ss_dssp             EEHHHHHHHHHTTCHHHHHTCCCCTTSHHHHHHH
T ss_pred             echHHHHHhhhhChHHHHHcCCCCCCchhhHHHH
Confidence            0134556666677777777887777766665543

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=97.55  E-value=1e-05  Score=56.51  Aligned_cols=50  Identities=10%  Similarity=0.052  Sum_probs=42.8

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHc---CCCCcc-CCCCC---cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHN---GMKYST-DVPND---PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~---~~~~~~-dVl~d---~d~r~dlK~ys~wpT~p   60 (118)
                      +++|+|     |.|+|++++.++|.+.   +++|.. ||-.+   ++.++.++..++|+|.|
T Consensus        16 Vvvysk-----~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP   72 (127)
T 3l4n_A           16 IIIFSK-----STCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVP   72 (127)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEc-----CCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcc
Confidence            789998     8899999999999985   789998 88765   35778888888999988

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=97.54  E-value=1.7e-05  Score=53.36  Aligned_cols=50  Identities=10%  Similarity=0.064  Sum_probs=41.4

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCC---cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPND---PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d---~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.|     |.|+|++++..+|.+.|++|.. ||-.+   ++.++.++..++|+|.|
T Consensus        19 v~vy~~-----~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP   72 (114)
T 3h8q_A           19 VVIFSK-----SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVP   72 (114)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEc-----CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccC
Confidence            577887     8999999999999999999998 88753   34567777777888887

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=97.53  E-value=2.7e-05  Score=51.63  Aligned_cols=45  Identities=9%  Similarity=0.152  Sum_probs=39.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCc-ccCCCh
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS-KVDASG   60 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys-~wpT~p   60 (118)
                      .|.|+|++++..+|.+.|++|.. ||-.+++.++.++..+ .|.+.|
T Consensus        23 ~~~Cp~C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP   69 (99)
T 3qmx_A           23 WSTCPFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLP   69 (99)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTTCCCSC
T ss_pred             cCCChhHHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCC
Confidence            38999999999999999999999 9999998888887766 777766

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=97.52  E-value=8.5e-05  Score=51.79  Aligned_cols=43  Identities=12%  Similarity=0.193  Sum_probs=38.5

Q ss_pred             HHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhc---C-Ccceeehhh
Q 033504           65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAY---S-KFSYFCSFS  112 (118)
Q Consensus        65 ~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~---~-~~~~~dv~~  112 (118)
                      +.++++++.++|++|+|     |.|+|++++.++|++.   + .|..+||..
T Consensus         5 ~~~~~ii~~~~Vvvysk-----~~Cp~C~~ak~lL~~~~~~~v~~~~idid~   51 (127)
T 3l4n_A            5 KEYSLILDLSPIIIFSK-----STCSYSKGMKELLENEYQFIPNYYIIELDK   51 (127)
T ss_dssp             HHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHEEEESCCEEEEGGG
T ss_pred             HHHHHHHccCCEEEEEc-----CCCccHHHHHHHHHHhcccCCCcEEEEecC
Confidence            46888999999999999     7899999999999995   6 899998864

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=97.45  E-value=2.3e-05  Score=52.05  Aligned_cols=50  Identities=8%  Similarity=-0.006  Sum_probs=41.1

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCC----cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPND----PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d----~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|++++++..+|.++|++|.. ||-.+    ++.++.++..++|++.|
T Consensus        21 v~vy~~-----~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP   75 (113)
T 3rhb_A           21 VVIYSK-----TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVP   75 (113)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEC-----CCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcC
Confidence            677877     8999999999999999999998 88763    55666677777777776

>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}

Probab=97.38  E-value=1.6e-07  Score=75.71  Aligned_cols=87  Identities=10%  Similarity=0.009  Sum_probs=65.3

Q ss_pred             eecCCCCCCCCchHHHHHHHHHcCCCCccCCCCCcccccccCCCc--ccCCChh-----hH---HHHHH-----------
Q 033504           10 FKGIASYPSARSSRIVSGSLYHNGMKYSTDVPNDPDTHEDFRPTS--KVDASGL-----SL---KEVVE-----------   68 (118)
Q Consensus        10 mKG~~~~P~CgfS~~~v~~l~~~~~~~~~dVl~d~d~r~dlK~ys--~wpT~p~-----~l---~~~Ik-----------   68 (118)
                      ++++| ++.|||+|.         +.|.+    ++.+|+..+.|+  +||++++     ++   .+.+.           
T Consensus       222 ~~~sp-E~~~g~~r~---------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~  287 (352)
T 2hyx_A          222 AALTP-ETYFGVGKV---------VNYGG----GGAYDEGSAVFDYPPSLAANSFALRGRWALDYQGATSDGNDAAIKLN  287 (352)
T ss_dssp             SCSCC-CEECSTTTC---------CCBCS----CSCCCSEEEEECCCSSCCTTEEEEEEEEEECSSCEEECSSSCEEEEE
T ss_pred             ccCCC-ccccchhhh---------hcccC----CCccCCCceeeecCCCCCCCceeccceeecCcceeeecCCCcEEEEE
Confidence            78999 899999998         45554    678899999998  8998661     00   00000           


Q ss_pred             ---HHhh-----cCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeeh
Q 033504           69 ---QDVK-----ENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCS  110 (118)
Q Consensus        69 ---~li~-----~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv  110 (118)
                         +-++     ...+-+.++|.|..+.|+||.++++|+++.+ .+.+|||
T Consensus       288 ~~~~~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  338 (352)
T 2hyx_A          288 YHAKDVYIVVGGTGTLTVVRDGKPATLPISGPPTTHQVVAGYRLASETLEV  338 (352)
T ss_dssp             EEEEEEEEEEESSEEEEEEETTEEEEEEECSSCEEEEEEEEEEEEEEEEEE
T ss_pred             EeccceEEEecCCeeEEEEECCcccccccCCCCCeEEeecCCCCCcceEEE
Confidence               0011     1256667799999999999999999999999 9999998

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=97.24  E-value=3.3e-05  Score=63.01  Aligned_cols=51  Identities=10%  Similarity=-0.105  Sum_probs=43.5

Q ss_pred             eeeEeeecCCCCCCCCchHHHHH-HHHHcCCCCcc-CCCC------CcccccccCCCcccCCCh
Q 033504            5 LSNLIFKGIASYPSARSSRIVSG-SLYHNGMKYST-DVPN------DPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~-~l~~~~~~~~~-dVl~------d~d~r~dlK~ys~wpT~p   60 (118)
                      =++||+|     |.|+|++++.+ +|++.|++|.. ||++      +++.++.++..+.|+|.|
T Consensus       262 ~VvVYsk-----~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVP  320 (362)
T 2jad_A          262 EIFVASK-----TYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVP  320 (362)
T ss_dssp             SEEEEEC-----TTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSC
T ss_pred             CEEEEEc-----CCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcC
Confidence            3788998     89999999998 79999999988 8854      566788888888898888

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=97.02  E-value=0.00059  Score=43.25  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=32.7

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      +|++|.+. ++.|.|+|+.++.++|+++| .|..+||.
T Consensus         1 ~v~iY~~~-~~~~~Cp~C~~ak~~L~~~gi~y~~idI~   37 (87)
T 1aba_A            1 MFKVYGYD-SNIHKCGPCDNAKRLLTVKKQPFEFINIM   37 (87)
T ss_dssp             CEEEEECC-TTTSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CEEEEEeC-CCCCcCccHHHHHHHHHHcCCCEEEEEee
Confidence            47788875 88999999999999999999 99999996

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=97.02  E-value=0.00092  Score=43.10  Aligned_cols=44  Identities=18%  Similarity=0.461  Sum_probs=38.7

Q ss_pred             HHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-C---cceeehhh
Q 033504           64 KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-K---FSYFCSFS  112 (118)
Q Consensus        64 ~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~---~~~~dv~~  112 (118)
                      .+.++++++.++|++|.+     |.|++.+++..+|++.+ .   |..+||..
T Consensus         2 ~~~~~~~i~~~~v~~f~~-----~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~   49 (105)
T 1kte_A            2 QAFVNSKIQPGKVVVFIK-----PTCPFCRKTQELLSQLPFKEGLLEFVDITA   49 (105)
T ss_dssp             HHHHHHHCCTTCEEEEEC-----SSCHHHHHHHHHHHHSCBCTTSEEEEEGGG
T ss_pred             chHHHhhcccCCEEEEEc-----CCCHhHHHHHHHHHHcCCCCCccEEEEccC
Confidence            357889999999999975     89999999999999999 8   88888854

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=96.83  E-value=0.00014  Score=50.37  Aligned_cols=50  Identities=8%  Similarity=-0.014  Sum_probs=41.1

Q ss_pred             eeEeeecCCCCCCCCchHHH-HHHHHHcC---CCCcc-CCCCCc---ccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIV-SGSLYHNG---MKYST-DVPNDP---DTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~-v~~l~~~~---~~~~~-dVl~d~---d~r~dlK~ys~wpT~p   60 (118)
                      +++|.|     |.|+|++++ .++|.+.+   ++|.. ||..|+   +.++.++...+|++.|
T Consensus        39 Vvvy~~-----~~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP   96 (129)
T 3ctg_A           39 VFVAAK-----TYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVP   96 (129)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEC-----CCCCchHHHHHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCC
Confidence            677876     899999999 99999999   89998 988765   3566777777777777

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.80  E-value=0.0019  Score=44.14  Aligned_cols=46  Identities=11%  Similarity=0.331  Sum_probs=41.2

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +..+.++++++.++|++|.+     |.|++.+++..+|++.+ .|..+||-.
T Consensus        15 ~~~~~~~~~i~~~~vvvf~~-----~~Cp~C~~~~~~L~~~~i~~~~vdid~   61 (130)
T 2cq9_A           15 APVNQIQETISDNCVVIFSK-----TSCSYCTMAKKLFHDMNVNYKVVELDL   61 (130)
T ss_dssp             CHHHHHHHHHHHSSEEEEEC-----SSCSHHHHHHHHHHHHTCCCEEEETTT
T ss_pred             HHHHHHHHHHcCCcEEEEEc-----CCChHHHHHHHHHHHcCCCcEEEECcC
Confidence            56778899999999999975     89999999999999999 999999853

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=96.76  E-value=0.0016  Score=44.88  Aligned_cols=46  Identities=11%  Similarity=0.088  Sum_probs=39.6

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHH-HHHHHhcC----Ccceeehh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLA-VRVLGAYS----KFSYFCSF  111 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~-v~iL~~~~----~~~~~dv~  111 (118)
                      .+..+.++++++.++|++|.+     |.|+|++++ .++|++.|    .|..+||.
T Consensus        24 ~~~~~~v~~~i~~~~Vvvy~~-----~~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd   74 (129)
T 3ctg_A           24 QETVAHVKDLIGQKEVFVAAK-----TYCPYCKATLSTLFQELNVPKSKALVLELD   74 (129)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEC-----TTCHHHHHHHHHHHTTSCCCGGGEEEEEGG
T ss_pred             HHHHHHHHHHHcCCCEEEEEC-----CCCCchHHHHHHHHHhcCccCCCcEEEEcc
Confidence            357889999999999999987     789999999 99999998    46666664

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=96.65  E-value=0.0018  Score=45.68  Aligned_cols=45  Identities=11%  Similarity=0.354  Sum_probs=40.7

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      ++.+.++++++.++|++|.+     |.|++.+++..+|++.+ .|..+||-
T Consensus        37 ~~~~~~~~~i~~~~Vvvf~~-----~~Cp~C~~~k~~L~~~~i~~~~vdId   82 (146)
T 2ht9_A           37 APVNQIQETISDNCVVIFSK-----TSCSYCTMAKKLFHDMNVNYKVVELD   82 (146)
T ss_dssp             CCHHHHHHHHHHCSEEEEEC-----TTCHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred             HHHHHHHHHhcCCCEEEEEC-----CCChhHHHHHHHHHHcCCCeEEEECc
Confidence            56678899999999999976     89999999999999999 99999985

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=96.58  E-value=0.0028  Score=42.66  Aligned_cols=47  Identities=15%  Similarity=0.154  Sum_probs=40.4

Q ss_pred             hhHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHH-HHHHHhcC----Ccceeehhh
Q 033504           61 LSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLA-VRVLGAYS----KFSYFCSFS  112 (118)
Q Consensus        61 ~~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~-v~iL~~~~----~~~~~dv~~  112 (118)
                      ++..+.++++++.++|++|.+     |.|++.+++ ..+|++.+    .|..+||..
T Consensus        12 ~~~~~~~~~~i~~~~Vvvf~~-----~~Cp~C~~alk~~L~~~~~~~i~~~~vdid~   63 (118)
T 3c1r_A           12 QETIKHVKDLIAENEIFVASK-----TYCPYCHAALNTLFEKLKVPRSKVLVLQLND   63 (118)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEC-----SSCHHHHHHHHHHHTTSCCCGGGEEEEEGGG
T ss_pred             HHHHHHHHHHHccCcEEEEEc-----CCCcCHHHHHHHHHHHcCCCCCCeEEEECcc
Confidence            356779999999999999998     789999999 99999998    566777753

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=96.55  E-value=0.0005  Score=43.47  Aligned_cols=36  Identities=14%  Similarity=0.348  Sum_probs=30.2

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      |.|++++++..+|.+.+++|.. ||.++++.++.++.
T Consensus        14 ~~C~~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~   50 (92)
T 2khp_A           14 PGCPYCARAKALLARKGAEFNEIDASATPELRAEMQE   50 (92)
T ss_dssp             TTCHHHHHHHHHHHHTTCCCEEEESTTSHHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH
Confidence            8999999999999999999999 99877665554443

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=96.50  E-value=0.00031  Score=47.52  Aligned_cols=50  Identities=4%  Similarity=-0.110  Sum_probs=38.5

Q ss_pred             eeEeeecCCCCCCCCchHHH-HHHHHHcC---CCCcc-CCCCCcc---cccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIV-SGSLYHNG---MKYST-DVPNDPD---THEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~-v~~l~~~~---~~~~~-dVl~d~d---~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|++++++ .++|.+.+   ++|.. ||..+++   .++.++...+|++.|
T Consensus        27 Vvvf~~-----~~Cp~C~~alk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP   84 (118)
T 3c1r_A           27 IFVASK-----TYCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVP   84 (118)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred             EEEEEc-----CCCcCHHHHHHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcC
Confidence            566776     899999999 99999999   89998 9987653   455565555666655

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=96.41  E-value=0.0028  Score=42.02  Aligned_cols=45  Identities=27%  Similarity=0.453  Sum_probs=39.9

Q ss_pred             HHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-C---cceeehhh
Q 033504           63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-K---FSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~---~~~~dv~~  112 (118)
                      ..+.++++++.++|++|-+     |.|++.+++..+|++.+ .   |..+||..
T Consensus         8 ~~~~~~~~i~~~~vv~f~~-----~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~   56 (114)
T 2hze_A            8 AEEFVQQRLANNKVTIFVK-----YTCPFCRNALDILNKFSFKRGAYEIVDIKE   56 (114)
T ss_dssp             HHHHHHTTCCTTCEEEEEC-----TTCHHHHHHHHHHTTSCBCTTSEEEEEGGG
T ss_pred             HHHHHHHHhccCCEEEEEe-----CCChhHHHHHHHHHHcCCCcCceEEEEccC
Confidence            4568899999999999975     78999999999999999 8   99998853

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=96.31  E-value=0.00084  Score=41.11  Aligned_cols=34  Identities=9%  Similarity=0.244  Sum_probs=28.7

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      |.|++++++..+|.+.|++|.. ||-.+++.++.+
T Consensus         9 ~~C~~C~~~~~~l~~~~i~~~~~~i~~~~~~~~~~   43 (82)
T 1fov_A            9 ETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM   43 (82)
T ss_dssp             SSCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHH
T ss_pred             CCChhHHHHHHHHHHCCCCcEEEECCCCHHHHHHH
Confidence            7899999999999999999999 998766544443

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.30  E-value=0.0014  Score=44.86  Aligned_cols=50  Identities=6%  Similarity=0.024  Sum_probs=36.5

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCC---cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPND---PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d---~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|++++++..+|.+.+++|.. ||-.+   ++.++.+.....+.+.|
T Consensus        29 vvvf~~-----~~Cp~C~~~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP   82 (130)
T 2cq9_A           29 VVIFSK-----TSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVP   82 (130)
T ss_dssp             EEEEEC-----SSCSHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSS
T ss_pred             EEEEEc-----CCChHHHHHHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcC
Confidence            455654     8999999999999999999998 88766   44444454444444444

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=96.26  E-value=0.0013  Score=45.17  Aligned_cols=37  Identities=14%  Similarity=0.196  Sum_probs=32.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++..++.++.
T Consensus        12 ~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~   49 (121)
T 3rdw_A           12 NPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKE   49 (121)
T ss_dssp             CTTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHH
Confidence            37899999999999999999999 99999887776654

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=96.25  E-value=0.0013  Score=45.20  Aligned_cols=37  Identities=22%  Similarity=0.446  Sum_probs=32.9

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. ||.+++..++.++.
T Consensus        11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~   48 (120)
T 3gkx_A           11 YPACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKA   48 (120)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHH
Confidence            37899999999999999999999 99999887776654

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=96.22  E-value=0.00074  Score=43.56  Aligned_cols=50  Identities=12%  Similarity=0.153  Sum_probs=34.8

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCC---Ccc-CCCCCc---ccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMK---YST-DVPNDP---DTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~---~~~-dVl~d~---d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|++++++..+|.+.+++   |.. ||-.++   +.++.+....++.+.|
T Consensus        14 v~~f~~-----~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP   70 (105)
T 1kte_A           14 VVVFIK-----PTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVP   70 (105)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSC
T ss_pred             EEEEEc-----CCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcC
Confidence            566654     8999999999999999999   777 887763   3334444333444433

>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12

Probab=95.99  E-value=0.0018  Score=44.33  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=32.6

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPT   53 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~y   53 (118)
                      |.|++++++.+.|.++|++|.. |+.+++..++.++..
T Consensus         8 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~   45 (120)
T 3l78_A            8 PSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKI   45 (120)
T ss_dssp             SSCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHH
Confidence            7899999999999999999999 999988877666543

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=95.95  E-value=0.0017  Score=44.62  Aligned_cols=36  Identities=19%  Similarity=0.355  Sum_probs=32.2

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      |.|++++++.+.|.++|++|.. |+.+++.+++.++.
T Consensus        11 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~   47 (120)
T 3fz4_A           11 PKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRN   47 (120)
T ss_dssp             SSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHH
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHH
Confidence            6899999999999999999999 99999887766654

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=95.90  E-value=0.0031  Score=44.49  Aligned_cols=37  Identities=14%  Similarity=0.239  Sum_probs=33.2

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++..++.++.
T Consensus         9 ~p~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~   46 (141)
T 1s3c_A            9 NPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVK   46 (141)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHH
Confidence            38999999999999999999999 99999888876654

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=95.88  E-value=0.0032  Score=38.90  Aligned_cols=40  Identities=8%  Similarity=-0.022  Sum_probs=29.3

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCC--CcccccccCCCccc
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPN--DPDTHEDFRPTSKV   56 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~--d~d~r~dlK~ys~w   56 (118)
                      |.|++++++..+|.+.|++|.. +|-.  ++..++.+.....+
T Consensus        12 ~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~   54 (89)
T 3msz_A           12 NGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGK   54 (89)
T ss_dssp             TTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTC
T ss_pred             CCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCC
Confidence            6899999999999999999987 6543  33344555544454

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=95.81  E-value=0.0018  Score=45.67  Aligned_cols=50  Identities=6%  Similarity=0.024  Sum_probs=36.0

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCC---cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPND---PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d---~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|++++++..+|.+.+++|.. ||-.+   ++.++.+....++.+.|
T Consensus        51 Vvvf~~-----~~Cp~C~~~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP  104 (146)
T 2ht9_A           51 VVIFSK-----TSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVP  104 (146)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSC
T ss_pred             EEEEEC-----CCChhHHHHHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcC
Confidence            455654     8999999999999999999988 88665   34444454444444444

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=95.80  E-value=0.016  Score=37.49  Aligned_cols=45  Identities=13%  Similarity=0.272  Sum_probs=38.9

Q ss_pred             hHHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           62 SLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        62 ~l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      ++.+.+++++++.+|++|-.     |.|++.+++..+|++.+ +|..+||-
T Consensus         8 ~~~~~~~~~~~~~~vv~f~a-----~~C~~C~~~~~~l~~~~~~~~~v~v~   53 (116)
T 2e7p_A            8 AALKKAKELASSAPVVVFSK-----TYCGYCNRVKQLLTQVGASYKVVELD   53 (116)
T ss_dssp             HHHHHHHHHHTSSSEEEEEC-----TTCHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred             HHHHHHHHHHcCCCEEEEEC-----CCChhHHHHHHHHHHcCCCeEEEEcc
Confidence            45678888999999999863     79999999999999999 99888874

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=95.72  E-value=0.0047  Score=45.54  Aligned_cols=49  Identities=14%  Similarity=0.152  Sum_probs=37.9

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.+     |.|+|++++..+|.++|++|.. ||..|++ ++.++....+.+.|
T Consensus       172 i~ly~~-----~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~-~~~l~~~~g~~~vP  221 (241)
T 1nm3_A          172 ISIFTK-----PGCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGRTTVP  221 (241)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCCSSSC
T ss_pred             EEEEEC-----CCChHHHHHHHHHHHcCCceEEEECCCchH-HHHHHHHhCCCCcC
Confidence            566765     8999999999999999999999 9987744 35555545555555

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=95.68  E-value=0.012  Score=48.93  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=41.5

Q ss_pred             HHHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           63 LKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ..+.|+++++.++|++|.|.     .|.|+.++.++|++.+ .|..+||..
T Consensus         7 ~~~~v~~~i~~~~v~vy~~~-----~Cp~C~~~k~~L~~~~i~~~~~dv~~   52 (598)
T 2x8g_A            7 TSQWLRKTVDSAAVILFSKT-----TCPYCKKVKDVLAEAKIKHATIELDQ   52 (598)
T ss_dssp             HHHHHHHHHHHCSEEEEECT-----TCHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred             HHHHHHHHhccCCEEEEECC-----CChhHHHHHHHHHHCCCCcEEEEccc
Confidence            45789999999999999997     8999999999999999 999999863

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=95.58  E-value=0.0041  Score=38.00  Aligned_cols=36  Identities=14%  Similarity=0.316  Sum_probs=30.4

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|++++++...|.+.+++|.. ||-++++.++.++
T Consensus         8 ~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~   44 (81)
T 1h75_A            8 RNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR   44 (81)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHCCCCeEEEECCCCHHHHHHHH
Confidence            37999999999999999999999 9988876555443

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=95.56  E-value=0.017  Score=36.89  Aligned_cols=34  Identities=15%  Similarity=0.184  Sum_probs=29.8

Q ss_pred             CCeeeeecCCCCCCCCcch------HHHHHHHHhcC-Ccceeehhh
Q 033504           74 NPVMLYMKGVPEFPQCGFS------SLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        74 ~~vvlfmKGtp~~P~CgFS------~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .+|++|.+     |.|++.      +++.++|+++| .|..+||.+
T Consensus         2 ~~v~ly~~-----~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~   42 (93)
T 1t1v_A            2 SGLRVYST-----SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQ   42 (93)
T ss_dssp             CCEEEEEC-----SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTS
T ss_pred             CCEEEEEc-----CCCCCchhhHHHHHHHHHHHHCCCceEEEECCC
Confidence            36888865     789999      89999999999 999999963

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=95.53  E-value=0.0021  Score=42.62  Aligned_cols=35  Identities=17%  Similarity=0.133  Sum_probs=29.3

Q ss_pred             eeeEeeecCCCCCCCCchHHHHHHHHHcCCC---Ccc-CCCCCc
Q 033504            5 LSNLIFKGIASYPSARSSRIVSGSLYHNGMK---YST-DVPNDP   44 (118)
Q Consensus         5 ~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~---~~~-dVl~d~   44 (118)
                      .+++|-+     |.|++++++..+|.+.+++   |.. ||-.++
T Consensus        20 ~vv~f~~-----~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~~~   58 (114)
T 2hze_A           20 KVTIFVK-----YTCPFCRNALDILNKFSFKRGAYEIVDIKEFK   58 (114)
T ss_dssp             CEEEEEC-----TTCHHHHHHHHHHTTSCBCTTSEEEEEGGGSS
T ss_pred             CEEEEEe-----CCChhHHHHHHHHHHcCCCcCceEEEEccCCC
Confidence            3556654     7899999999999999999   888 987775

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=95.50  E-value=0.0043  Score=37.05  Aligned_cols=35  Identities=20%  Similarity=0.376  Sum_probs=29.6

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .|.|++++++...|.+.|++|.. ||-.+++.++.+
T Consensus         8 ~~~C~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~   43 (75)
T 1r7h_A            8 KPACVQCTATKKALDRAGLAYNTVDISLDDEARDYV   43 (75)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEEECCCCHHHHHHH
Confidence            37899999999999999999999 998877655444

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=95.39  E-value=0.0016  Score=44.64  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=32.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      .|.|++++++.+.|.++|++|.. |+.+++.+++.++.
T Consensus        11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~   48 (119)
T 3f0i_A           11 NPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKR   48 (119)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHH
Confidence            37899999999999999999999 99988877666553

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=95.24  E-value=0.0043  Score=51.65  Aligned_cols=50  Identities=16%  Similarity=0.128  Sum_probs=42.9

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCC---cccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPND---PDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d---~d~r~dlK~ys~wpT~p   60 (118)
                      +++|.|+     .|+|+.++.++|.+++++|.. ||..+   ++.++.++..+.|++.|
T Consensus        20 v~vy~~~-----~Cp~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP   73 (598)
T 2x8g_A           20 VILFSKT-----TCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVP   73 (598)
T ss_dssp             EEEEECT-----TCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSC
T ss_pred             EEEEECC-----CChhHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCceeC
Confidence            6788875     899999999999999999999 98865   56788888778888877

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=95.16  E-value=0.0055  Score=42.28  Aligned_cols=36  Identities=17%  Similarity=0.344  Sum_probs=31.6

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRP   52 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~   52 (118)
                      |.|++++++...|.++|++|.. ||.+|+..++.++.
T Consensus         9 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~   45 (132)
T 1z3e_A            9 PSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQ   45 (132)
T ss_dssp             TTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHH
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHH
Confidence            7999999999999999999999 99998776665543

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.07  E-value=0.024  Score=37.69  Aligned_cols=34  Identities=21%  Similarity=0.262  Sum_probs=29.9

Q ss_pred             CCeeeeecCCCCCCCCcchH------HHHHHHHhcC-Ccceeehhh
Q 033504           74 NPVMLYMKGVPEFPQCGFSS------LAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        74 ~~vvlfmKGtp~~P~CgFS~------~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .+|++|.+     |.|+|.+      ++.++|+++| .|..+||..
T Consensus         8 m~V~vy~~-----~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~   48 (111)
T 2ct6_A            8 MVIRVFIA-----SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM   48 (111)
T ss_dssp             CCEEEEEC-----SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred             cEEEEEEc-----CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC
Confidence            36888876     6899999      8999999999 999999964

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=94.67  E-value=0.0084  Score=37.55  Aligned_cols=25  Identities=24%  Similarity=0.441  Sum_probs=23.4

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVP   41 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl   41 (118)
                      |.|++++++..+|.+.+++|.. ||-
T Consensus        14 ~~C~~C~~~~~~L~~~~i~~~~vdv~   39 (89)
T 2klx_A           14 PNCPYCKRARDLLDKKGVKYTDIDAS   39 (89)
T ss_dssp             SCCTTTHHHHHHHHHHTCCEEEECSC
T ss_pred             CCChhHHHHHHHHHHcCCCcEEEECC
Confidence            8999999999999999999998 886

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=94.58  E-value=0.0027  Score=42.85  Aligned_cols=34  Identities=12%  Similarity=0.070  Sum_probs=29.2

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCccccccc
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dl   50 (118)
                      |.|++++++.+.|.++|++|.. ||.+++..++.+
T Consensus         8 ~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l   42 (114)
T 1rw1_A            8 KACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHL   42 (114)
T ss_dssp             SSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHH
T ss_pred             CCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHH
Confidence            7999999999999999999999 999877444443

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=94.51  E-value=0.003  Score=39.74  Aligned_cols=27  Identities=7%  Similarity=0.143  Sum_probs=24.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPN   42 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~   42 (118)
                      .|.|++++++..+|.+.|++|.. ||-.
T Consensus        19 ~~~Cp~C~~~~~~L~~~gi~~~~~~v~~   46 (92)
T 3ic4_A           19 LSTCPHCKRTLEFLKREGVDFEVIWIDK   46 (92)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEEEeee
Confidence            37899999999999999999998 8863

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=94.42  E-value=0.052  Score=35.44  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=29.7

Q ss_pred             cCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           73 ENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        73 ~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      +.+|++|-+     |.|+|..++.++|++.| .|..+||-
T Consensus         3 ta~I~vYs~-----~~Cp~C~~aK~~L~~~gi~y~~idi~   37 (92)
T 2lqo_A            3 TAALTIYTT-----SWCGYCLRLKTALTANRIAYDEVDIE   37 (92)
T ss_dssp             SSCEEEEEC-----TTCSSHHHHHHHHHHTTCCCEEEETT
T ss_pred             CCcEEEEcC-----CCCHhHHHHHHHHHhcCCceEEEEcC
Confidence            456777765     79999999999999999 99999984

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=94.07  E-value=0.034  Score=40.77  Aligned_cols=45  Identities=18%  Similarity=0.312  Sum_probs=36.0

Q ss_pred             HHHHHH-HHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           63 LKEVVE-QDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        63 l~~~Ik-~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +.+.|+ ..+...+|++|.+     |.|+|++++.++|+++| .|..+||..
T Consensus       158 il~~l~~~~i~~~~i~ly~~-----~~Cp~C~~a~~~L~~~~i~~~~~~i~~  204 (241)
T 1nm3_A          158 MLKYLAPQHQVQESISIFTK-----PGCPFCAKAKQLLHDKGLSFEEIILGH  204 (241)
T ss_dssp             HHHHHCTTSCCCCCEEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEETTT
T ss_pred             HHHHhhhhccccceEEEEEC-----CCChHHHHHHHHHHHcCCceEEEECCC
Confidence            333443 3356788999987     79999999999999999 999999853

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=93.67  E-value=0.0047  Score=41.94  Aligned_cols=33  Identities=15%  Similarity=0.170  Sum_probs=28.1

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-CCCCCcccccc
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-DVPNDPDTHED   49 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~d   49 (118)
                      |.|++++++.+.|.++|++|.. ||.+|+..++.
T Consensus        13 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~   46 (120)
T 2kok_A           13 KNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAET   46 (120)
T ss_dssp             SSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHH
T ss_pred             CCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHH
Confidence            7999999999999999999999 99877643333

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=92.97  E-value=0.082  Score=34.40  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=30.7

Q ss_pred             hcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           72 KENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        72 ~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ..++|++|-+     |.|+|++++..+|++.| .|..+||..
T Consensus        14 ~~~~v~vy~~-----~~Cp~C~~ak~~L~~~~i~y~~idI~~   50 (99)
T 3qmx_A           14 VSAKIEIYTW-----STCPFCMRALALLKRKGVEFQEYCIDG   50 (99)
T ss_dssp             CCCCEEEEEC-----TTCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred             CCCCEEEEEc-----CCChhHHHHHHHHHHCCCCCEEEEcCC
Confidence            3567888765     68999999999999999 999999854

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=92.94  E-value=0.075  Score=34.28  Aligned_cols=36  Identities=17%  Similarity=0.353  Sum_probs=31.1

Q ss_pred             hcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           72 KENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        72 ~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++++|++|-+     |.|++++++..+|++.| .|..+||..
T Consensus        20 ~~~~v~ly~~-----~~Cp~C~~ak~~L~~~~i~y~~vdI~~   56 (103)
T 3nzn_A           20 DRGKVIMYGL-----STCVWCKKTKKLLTDLGVDFDYVYVDR   56 (103)
T ss_dssp             CCSCEEEEEC-----SSCHHHHHHHHHHHHHTBCEEEEEGGG
T ss_pred             CCCeEEEEcC-----CCCchHHHHHHHHHHcCCCcEEEEeec
Confidence            5577888864     68999999999999999 999999863

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=92.88  E-value=0.013  Score=38.04  Aligned_cols=27  Identities=11%  Similarity=0.086  Sum_probs=24.4

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPN   42 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~   42 (118)
                      .|.|++++++..+|.++|++|.. ||-.
T Consensus        29 ~~~Cp~C~~ak~~L~~~~i~y~~vdI~~   56 (103)
T 3nzn_A           29 LSTCVWCKKTKKLLTDLGVDFDYVYVDR   56 (103)
T ss_dssp             CSSCHHHHHHHHHHHHHTBCEEEEEGGG
T ss_pred             CCCCchHHHHHHHHHHcCCCcEEEEeec
Confidence            37899999999999999999998 8865

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A

Probab=92.78  E-value=0.011  Score=36.22  Aligned_cols=35  Identities=14%  Similarity=0.155  Sum_probs=26.4

Q ss_pred             CCCCCchHHHHHHHHH-----cCCCCcc-CCCCCccccccc
Q 033504           16 YPSARSSRIVSGSLYH-----NGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~-----~~~~~~~-dVl~d~d~r~dl   50 (118)
                      .|.|++++++.++|.+     .+++|.. ||.++++.++.+
T Consensus         8 ~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l   48 (85)
T 1ego_A            8 RSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDL   48 (85)
T ss_dssp             CTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHH
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHH
Confidence            3689999999999998     6788888 887665433333

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=92.74  E-value=0.12  Score=32.06  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=28.5

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++++|-+     |.|++++++..+|++.+ .|..+||.+
T Consensus         7 ~v~ly~~-----~~C~~C~~~~~~L~~~~i~~~~~di~~   40 (92)
T 2khp_A            7 DVIIYTR-----PGCPYCARAKALLARKGAEFNEIDASA   40 (92)
T ss_dssp             CEEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEESTT
T ss_pred             cEEEEEC-----CCChhHHHHHHHHHHcCCCcEEEECCC
Confidence            5677754     79999999999999999 999999863

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=92.66  E-value=0.1  Score=31.37  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=27.9

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++++|-+     |.|++++++..+|++.| .|..+||-+
T Consensus         2 ~i~~y~~-----~~C~~C~~~~~~l~~~~i~~~~~~i~~   35 (82)
T 1fov_A            2 NVEIYTK-----ETCPYCHRAKALLSSKGVSFQELPIDG   35 (82)
T ss_dssp             CEEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred             cEEEEEC-----CCChhHHHHHHHHHHCCCCcEEEECCC
Confidence            4666643     68999999999999999 999999853

>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}

Probab=92.48  E-value=0.095  Score=35.27  Aligned_cols=42  Identities=5%  Similarity=-0.011  Sum_probs=33.3

Q ss_pred             eeeeEeeecCCCCCCCCchHHHHHHHHH----cCCCCcc-CCCCCccccccc
Q 033504            4 SLSNLIFKGIASYPSARSSRIVSGSLYH----NGMKYST-DVPNDPDTHEDF   50 (118)
Q Consensus         4 ~~~~lfmKG~~~~P~CgfS~~~v~~l~~----~~~~~~~-dVl~d~d~r~dl   50 (118)
                      ..+++|-+     |.|++.+++.++|.+    .+++|.. ||-+|++..+.+
T Consensus        30 ~~vv~y~~-----~~C~~C~~a~~~L~~l~~e~~i~~~~vDId~d~~l~~~y   76 (107)
T 2fgx_A           30 RKLVVYGR-----EGCHLCEEMIASLRVLQKKSWFELEVINIDGNEHLTRLY   76 (107)
T ss_dssp             CCEEEEEC-----SSCHHHHHHHHHHHHHHHHSCCCCEEEETTTCHHHHHHS
T ss_pred             cEEEEEeC-----CCChhHHHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHh
Confidence            34555544     789999999999998    7999999 999988765543

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=92.25  E-value=0.082  Score=35.98  Aligned_cols=27  Identities=15%  Similarity=0.257  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus        11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~   38 (120)
T 3gkx_A           11 YPACSTCQKAKKWLIENNIEYTNRLIVD   38 (120)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEeccc
Confidence            468999999999999999 999999965

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=92.24  E-value=0.12  Score=32.02  Aligned_cols=32  Identities=22%  Similarity=0.493  Sum_probs=27.5

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      +|++|-+     |.|++++++..+|++.+ .|..+||.
T Consensus         7 ~v~~y~~-----~~C~~C~~~~~~L~~~~i~~~~vdv~   39 (89)
T 2klx_A            7 EIILYTR-----PNCPYCKRARDLLDKKGVKYTDIDAS   39 (89)
T ss_dssp             CEEEESC-----SCCTTTHHHHHHHHHHTCCEEEECSC
T ss_pred             eEEEEEC-----CCChhHHHHHHHHHHcCCCcEEEECC
Confidence            5677743     78999999999999999 99999985

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=91.96  E-value=0.095  Score=35.70  Aligned_cols=27  Identities=11%  Similarity=0.140  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus        12 ~p~C~~c~ka~~~L~~~gi~~~~~di~~   39 (121)
T 3rdw_A           12 NPRCSKSRETLALVEQQGITPQVVLYLE   39 (121)
T ss_dssp             CTTCHHHHHHHHHHHTTTCCCEEECTTT
T ss_pred             CCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence            468999999999999999 999999875

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=91.80  E-value=0.1  Score=35.42  Aligned_cols=27  Identities=15%  Similarity=0.155  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus        11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~   38 (119)
T 3f0i_A           11 NPKCSKSRETLALLENQGIAPQVIKYLE   38 (119)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEECHHH
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEEecc
Confidence            468999999999999999 999999875

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=91.42  E-value=0.1  Score=34.86  Aligned_cols=27  Identities=11%  Similarity=0.109  Sum_probs=24.9

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus         7 ~~~C~~C~kak~~L~~~gi~~~~~di~~   34 (114)
T 1rw1_A            7 IKACDTMKKARTWLDEHKVAYDFHDYKA   34 (114)
T ss_dssp             CSSCHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred             CCCChHHHHHHHHHHHCCCceEEEeecC
Confidence            479999999999999999 999999974

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=91.22  E-value=0.13  Score=36.03  Aligned_cols=27  Identities=11%  Similarity=0.128  Sum_probs=25.1

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus         9 ~p~C~~crkak~~L~~~gi~~~~idi~~   36 (141)
T 1s3c_A            9 NPASGTSRNTLEMIRNSGTEPTIILYLE   36 (141)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEECTTT
T ss_pred             CCCChHHHHHHHHHHHcCCCEEEEECCC
Confidence            479999999999999999 999999975

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=90.96  E-value=0.1  Score=35.47  Aligned_cols=27  Identities=15%  Similarity=0.266  Sum_probs=24.7

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus        10 ~~~C~~c~ka~~~L~~~gi~~~~~di~~   37 (120)
T 3fz4_A           10 YPKCSTCRRAKAELDDLAWDYDAIDIKK   37 (120)
T ss_dssp             CSSCHHHHHHHHHHHHHTCCEEEEETTT
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEEecc
Confidence            468999999999999999 999999865

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=90.68  E-value=0.14  Score=31.70  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=26.8

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSF  111 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~  111 (118)
                      +|++|-     .|.|++++++..+|++.| .|..+||.
T Consensus        13 ~v~ly~-----~~~Cp~C~~~~~~L~~~gi~~~~~~v~   45 (92)
T 3ic4_A           13 EVLMYG-----LSTCPHCKRTLEFLKREGVDFEVIWID   45 (92)
T ss_dssp             SSEEEE-----CTTCHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred             eEEEEE-----CCCChHHHHHHHHHHHcCCCcEEEEee
Confidence            355552     468999999999999999 99999986

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=89.40  E-value=0.26  Score=28.93  Aligned_cols=27  Identities=11%  Similarity=0.094  Sum_probs=24.1

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|++++++..+|++.| .|..+||-+
T Consensus         8 ~~~C~~C~~~~~~l~~~~i~~~~~di~~   35 (75)
T 1r7h_A            8 KPACVQCTATKKALDRAGLAYNTVDISL   35 (75)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred             CCCChHHHHHHHHHHHcCCCcEEEECCC
Confidence            468999999999999999 999999853

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=89.35  E-value=0.24  Score=30.06  Aligned_cols=24  Identities=13%  Similarity=0.156  Sum_probs=21.6

Q ss_pred             CCCcchHHHHHHHHhcC-Ccceeeh
Q 033504           87 PQCGFSSLAVRVLGAYS-KFSYFCS  110 (118)
Q Consensus        87 P~CgFS~~~v~iL~~~~-~~~~~dv  110 (118)
                      |.|++++++..+|++.| .|...+|
T Consensus        12 ~~Cp~C~~~~~~L~~~~i~~~~~~v   36 (89)
T 3msz_A           12 NGCPYCVWAKQWFEENNIAFDETII   36 (89)
T ss_dssp             TTCHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             CCChhHHHHHHHHHHcCCCceEEEe
Confidence            58999999999999999 9988755

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=89.03  E-value=0.18  Score=33.91  Aligned_cols=27  Identities=11%  Similarity=0.093  Sum_probs=24.7

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++.+.|+++| .|...||.+
T Consensus        12 ~~~C~~C~ka~~~L~~~gi~y~~~di~~   39 (120)
T 2kok_A           12 IKNCDTMKKARIWLEDHGIDYTFHDYKK   39 (120)
T ss_dssp             CSSCHHHHHHHHHHHHHTCCEEEEEHHH
T ss_pred             CCCChHHHHHHHHHHHcCCcEEEEeeeC
Confidence            468999999999999999 999999964

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=88.74  E-value=0.23  Score=33.87  Aligned_cols=27  Identities=26%  Similarity=0.173  Sum_probs=24.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      .|.|.+++++...|++.| .|...||.+
T Consensus         8 ~~~C~~C~ka~~~L~~~gi~y~~~di~~   35 (132)
T 1z3e_A            8 SPSCTSCRKARAWLEEHEIPFVERNIFS   35 (132)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred             CCCChHHHHHHHHHHHcCCceEEEEccC
Confidence            478999999999999999 999999964

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=88.36  E-value=0.33  Score=29.12  Aligned_cols=33  Identities=12%  Similarity=0.181  Sum_probs=27.5

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +|++|-     .|.|++++++..+|++.+ .|..+||-+
T Consensus         2 ~v~~f~-----~~~C~~C~~~~~~l~~~~i~~~~vdi~~   35 (81)
T 1h75_A            2 RITIYT-----RNDCVQCHATKRAMENRGFDFEMINVDR   35 (81)
T ss_dssp             CEEEEE-----CTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred             EEEEEc-----CCCChhHHHHHHHHHHCCCCeEEEECCC
Confidence            355664     468999999999999999 999999853

>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A

Probab=88.30  E-value=0.18  Score=32.28  Aligned_cols=33  Identities=6%  Similarity=0.024  Sum_probs=27.8

Q ss_pred             CCCCCchHHHHHHHHHcCCC-Ccc-CCCCCccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMK-YST-DVPNDPDTHE   48 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~-~~~-dVl~d~d~r~   48 (118)
                      .|.||..+++.++|.+.+.+ |.. ||-+|++..+
T Consensus         8 a~~C~~C~~~~~~L~~~~~~~~~~vdid~~~~l~~   42 (87)
T 1ttz_A            8 RDDCHLCDQAVEALAQARAGAFFSVFIDDDAALES   42 (87)
T ss_dssp             CSSCHHHHHHHHHHHHTTCCCEEEEECTTCHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHhheEEEECCCCHHHHH
Confidence            38999999999999999997 666 9988876444

>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}

Probab=85.61  E-value=1.5  Score=32.33  Aligned_cols=22  Identities=18%  Similarity=0.489  Sum_probs=17.4

Q ss_pred             eeeeecCCCCCCCCcchHHHHHHHHhc
Q 033504           76 VMLYMKGVPEFPQCGFSSLAVRVLGAY  102 (118)
Q Consensus        76 vvlfmKGtp~~P~CgFS~~~v~iL~~~  102 (118)
                      ++.|..     |.|+..++++.+|++.
T Consensus       142 vv~F~a-----~wC~~C~~~~p~l~~l  163 (243)
T 2hls_A          142 IETIIT-----PSCPYCPYAVLLAHMF  163 (243)
T ss_dssp             EEEEEC-----SSCSSHHHHHHHHHHH
T ss_pred             EEEEEC-----CCCCCcHHHHHHHHHH
Confidence            455654     8999999999998873

>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}

Probab=85.29  E-value=0.003  Score=50.60  Aligned_cols=42  Identities=10%  Similarity=0.048  Sum_probs=37.8

Q ss_pred             eeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCc
Q 033504            9 IFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTS   54 (118)
Q Consensus         9 fmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys   54 (118)
                      .++|.|..+.|++|.++++++++.+..+.+ +|   + ++++++.|+
T Consensus       306 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~-~~~g~~~~~  348 (352)
T 2hyx_A          306 VRDGKPATLPISGPPTTHQVVAGYRLASETLEV---R-PSKGLQVFS  348 (352)
T ss_dssp             EETTEEEEEEECSSCEEEEEEEEEEEEEEEEEE---E-ECTTCEEEE
T ss_pred             EECCcccccccCCCCCeEEeecCCCCCcceEEE---E-ECCCcEEEE
Confidence            459999999999999999999999999888 98   3 899998876

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=82.07  E-value=0.24  Score=31.63  Aligned_cols=29  Identities=14%  Similarity=0.096  Sum_probs=25.1

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDP   44 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~   44 (118)
                      .|.|++++++...|.+.+++|.. +|-.++
T Consensus        27 a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~   56 (116)
T 2e7p_A           27 KTYCGYCNRVKQLLTQVGASYKVVELDELS   56 (116)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEEGGGST
T ss_pred             CCCChhHHHHHHHHHHcCCCeEEEEccCCC
Confidence            48999999999999999999887 776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	118
d1wika_	109	c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (M	3e-10
d1ktea_	105	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	2e-04

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.2 bits (122), Expect = 3e-10
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 60 GLSLKEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVL 99
          G S    ++    +  VML+MKG  +  +CGFS   + +L
Sbjct: 1  GSSGSSGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEIL 40

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 105

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 35.8 bits (82), Expect = 2e-04
 Identities = 8/53 (15%), Positives = 17/53 (32%), Gaps = 8/53 (15%)

Query: 64  KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRV---LGAYSKFSYFCSFSI 113
           +  V   ++   V++++K     P C F      +   L        F   + 
Sbjct: 2   QAFVNSKIQPGKVVVFIK-----PTCPFCRKTQELLSQLPFKEGLLEFVDITA 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	118
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.58
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.41
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	98.15
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	97.8
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	97.67
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	97.48
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	97.47
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	97.45
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	97.28
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	97.03
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	96.21
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	96.07
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	96.07
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	95.98
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	95.33
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	95.0
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	94.81
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	94.6
d1j9ba_	138	Arsenate reductase ArsC {Escherichia coli [TaxId:	93.89
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	92.61
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	91.46
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	91.12
d1aw9a2	81	Class phi GST {Maize (Zea mays), type III [TaxId:	86.67
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	86.6
d1g7oa2	75	Glutaredoxin 2 {Escherichia coli [TaxId: 562]}	85.15
d1ljra2	79	Class theta GST {Human (Homo sapiens) [TaxId: 9606	84.26
d1k0ma2	86	Chloride intracellular channel 1 (clic1) {Human (H	82.77
d1k0da2	92	Yeast prion protein ure2p, nitrogen regulation fra	81.56
d1eema2	98	Class omega GST {Human (Homo sapiens) [TaxId: 9606	80.62
d1gnwa2	84	Class phi GST {Mouse-ear cress (Arabidopsis thalia	80.09

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=4.8e-18  Score=115.92  Aligned_cols=58  Identities=19%  Similarity=0.239  Sum_probs=55.1

Q ss_pred             eeeeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCChh
Q 033504            4 SLSNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASGL   61 (118)
Q Consensus         4 ~~~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p~   61 (118)
                      .=+||||||||+.|+|+|++++.++|+++|++|.. |+.++++.++.++.+++|+|.|+
T Consensus        15 ~~VvvF~Kgt~~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~~~~~~~l~~~t~~~TvPq   73 (109)
T d1wika_          15 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQ   73 (109)
T ss_dssp             SSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred             CCEEEEeCCCCCCCCChHHHHHHHHHHhcCCCceEEEecccHHHHHHHHHhcCCCCCCe
Confidence            34899999999999999999999999999999999 99999999999999999999993

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.41  E-value=9.2e-14  Score=94.27  Aligned_cols=49  Identities=24%  Similarity=0.433  Sum_probs=45.9

Q ss_pred             HHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           65 EVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        65 ~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      ..|+++|++++||+||||||+.|+|+|++++.++|+++| .|..+||.+.
T Consensus         6 ~~i~~~i~~~~VvvF~Kgt~~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~   55 (109)
T d1wika_           6 SGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED   55 (109)
T ss_dssp             CCHHHHHTTSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSC
T ss_pred             HHHHHHHhcCCEEEEeCCCCCCCCChHHHHHHHHHHhcCCCceEEEeccc
Confidence            368899999999999999999999999999999999999 9999998753

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=98.15  E-value=2.6e-07  Score=57.96  Aligned_cols=50  Identities=10%  Similarity=0.146  Sum_probs=45.9

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|-|     |.|+|+.++.++|+++|++|.. ||.+|++.++.++..++|+|.|
T Consensus         3 I~iys~-----~~Cp~C~~ak~~L~~~~i~y~~~di~~~~~~~~~~~~~~g~~tvP   53 (82)
T d1fova_           3 VEIYTK-----ETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVP   53 (82)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSSCCSC
T ss_pred             EEEEeC-----CCCHhHHHHHHHHHHcCCCeEEEeccchHHHHHHHHHHhCCCCCC
Confidence            466666     7899999999999999999999 9999999999999999999988

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.80  E-value=8.9e-08  Score=63.19  Aligned_cols=50  Identities=12%  Similarity=0.133  Sum_probs=39.3

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCc-----c-CCCCCcc-cccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYS-----T-DVPNDPD-THEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~-----~-dVl~d~d-~r~dlK~ys~wpT~p   60 (118)
                      +++|.|     |.|+|++++.++|.++|+++.     . |+..|++ .++.++..++|+|.|
T Consensus        14 Vviysk-----~~Cp~C~~ak~ll~~~~~~~~~~~~~e~d~~~d~~~~~~~l~~~~g~~tvP   70 (105)
T d1ktea_          14 VVVFIK-----PTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVP   70 (105)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSC
T ss_pred             EEEEEC-----CCCchHHHHHHHHHHhCCccceeeeeecccccccHHHHHHHhhccCCCcCc
Confidence            678887     789999999999999998743     3 5555543 556678888999988

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=97.67  E-value=7.4e-06  Score=50.11  Aligned_cols=49  Identities=14%  Similarity=0.152  Sum_probs=40.9

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|-|     |.|+|+.+|.++|.++|++|.. ||..|++ ++.++..+.|.|.|
T Consensus         7 I~iYs~-----~~C~~C~~ak~lL~~~~i~~~~~~v~~~~~-~~~~~~~~~~~tvP   56 (74)
T d1nm3a1           7 ISIFTK-----PGCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSGRTTVP   56 (74)
T ss_dssp             EEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTCCSSSC
T ss_pred             EEEEEC-----CCCHHHHHHHHHHHHcCCCeEEEEccCcHH-HHHHHHHhCCccCC
Confidence            467755     8999999999999999999999 9987754 56666778888887

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.48  E-value=4.8e-05  Score=49.52  Aligned_cols=44  Identities=18%  Similarity=0.401  Sum_probs=37.8

Q ss_pred             HHHHHHHhhcCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           64 KEVVEQDVKENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        64 ~~~Ik~li~~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +..|++.|++++|++|.|     |.|.|+.++.++|+++| +|..+++.+
T Consensus         2 ~~~v~~~i~~~~Vviysk-----~~Cp~C~~ak~ll~~~~~~~~~~~~~e   46 (105)
T d1ktea_           2 QAFVNSKIQPGKVVVFIK-----PTCPFCRKTQELLSQLPFKEGLLEFVD   46 (105)
T ss_dssp             HHHHHHHCCTTCEEEEEC-----SSCHHHHHHHHHHHHSCBCTTSEEEEE
T ss_pred             hhHHHHHhccCCEEEEEC-----CCCchHHHHHHHHHHhCCccceeeeee
Confidence            357899999999999998     58999999999999999 877665543

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.47  E-value=2.7e-05  Score=49.32  Aligned_cols=48  Identities=6%  Similarity=-0.131  Sum_probs=36.3

Q ss_pred             CCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCccc-----c-----cccCCCcccCCCh
Q 033504           13 IASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDT-----H-----EDFRPTSKVDASG   60 (118)
Q Consensus        13 ~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~-----r-----~dlK~ys~wpT~p   60 (118)
                      .++.|+|+|+.+|.++|.++|++|.. ++.++...     +     ...+..+.|.|.|
T Consensus         8 ~~~~~~C~~C~~AK~lL~~~~i~y~~~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~TvP   66 (87)
T d1abaa_           8 DSNIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMP   66 (87)
T ss_dssp             CTTTSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSC
T ss_pred             CCCCCCChhHHHHHHHHHHcCCCceeccccccccccCHHHHHHHHHHhcccCCCCceeC
Confidence            35679999999999999999999998 77764332     1     2234457788888

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=97.45  E-value=2.5e-05  Score=47.48  Aligned_cols=49  Identities=18%  Similarity=0.246  Sum_probs=39.8

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      ++||-|     |.|+|+.++.++|.++|++|.. ||.+|++.++.++.. +..+.|
T Consensus         3 v~iYt~-----~~C~~C~~ak~~L~~~~i~~~~~~i~~~~~~~~~~~~~-g~~tvP   52 (74)
T d1r7ha_           3 ITLYTK-----PACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMAL-GYVQAP   52 (74)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHT-TCBCCC
T ss_pred             EEEEeC-----CCChhHHHHHHHHHHcCCceEEEEccCCHHHHHHHHHh-CCCCcC
Confidence            455655     8999999999999999999999 999998877766554 445656

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=5.3e-05  Score=46.39  Aligned_cols=49  Identities=10%  Similarity=0.222  Sum_probs=39.1

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccCCCcccCCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKVDASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~wpT~p   60 (118)
                      +++|-|     |.|+|+.++.++|.++|++|.. ||.+|++.++.++. .++.+.|
T Consensus         3 i~iYs~-----~~C~~C~~ak~~L~~~~i~y~~~~i~~~~~~~~~~~~-~g~~tvP   52 (76)
T d1h75a_           3 ITIYTR-----NDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-QGFRQLP   52 (76)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-TTCCSSC
T ss_pred             EEEEeC-----CCCccHHHHHHHHHhcCceeEEEeecCCHHHHHHHHh-cCCCCCC
Confidence            456654     8899999999999999999999 99999887766654 2455555

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.00014  Score=46.17  Aligned_cols=40  Identities=15%  Similarity=0.243  Sum_probs=35.8

Q ss_pred             chHHHHHHHHHcCCCCcc-CCCCCcccccccCCCccc--CCCh
Q 033504           21 SSRIVSGSLYHNGMKYST-DVPNDPDTHEDFRPTSKV--DASG   60 (118)
Q Consensus        21 fS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK~ys~w--pT~p   60 (118)
                      .+.++..+|.++|++|.+ ||..|++.++.++..++|  +|.|
T Consensus        20 ~~~r~~~lL~~~~I~y~~iDi~~d~~~~~~~~~~~g~~~~t~P   62 (93)
T d1t1va_          20 QQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPP   62 (93)
T ss_dssp             HHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSC
T ss_pred             HHHHHHHHHHHCCCceEEEEecCchhHHHHHHHhccCCCceeE
Confidence            578999999999999999 999999999999888776  4777

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.00038  Score=43.19  Aligned_cols=50  Identities=10%  Similarity=0.096  Sum_probs=36.1

Q ss_pred             eeEeeecCCCCCCCCchHHHHHHHHHcC-----CCCcc-CCCCCcccccccCCCccc--CCCh
Q 033504            6 SNLIFKGIASYPSARSSRIVSGSLYHNG-----MKYST-DVPNDPDTHEDFRPTSKV--DASG   60 (118)
Q Consensus         6 ~~lfmKG~~~~P~CgfS~~~v~~l~~~~-----~~~~~-dVl~d~d~r~dlK~ys~w--pT~p   60 (118)
                      +++|-|     |.|+|+.++.++|.++|     ++|.. |+..+++.++.++....+  .|.|
T Consensus         3 vviysk-----~~Cp~C~~aK~ll~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~tvP   60 (85)
T d1egoa_           3 TVIFGR-----SGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP   60 (85)
T ss_dssp             EEEECC-----TTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSC
T ss_pred             EEEEeC-----CCCHhHHHHHHHHHHcCCCCCCceEEEEecCCCHHHHHHHHHHhcCCCCCCC
Confidence            456644     78999999999999976     45555 666677777777655544  4666

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=96.07  E-value=0.0024  Score=38.27  Aligned_cols=35  Identities=20%  Similarity=0.376  Sum_probs=30.5

Q ss_pred             cCCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           73 ENPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        73 ~~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ..+|++|-|     |.|+|+.++.++|++.| .|..+||.+
T Consensus         4 ~~~I~iYs~-----~~C~~C~~ak~lL~~~~i~~~~~~v~~   39 (74)
T d1nm3a1           4 QESISIFTK-----PGCPFCAKAKQLLHDKGLSFEEIILGH   39 (74)
T ss_dssp             CCCEEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEETTT
T ss_pred             cCcEEEEEC-----CCCHHHHHHHHHHHHcCCCeEEEEccC
Confidence            357888875     79999999999999999 999999854

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=96.07  E-value=0.0023  Score=39.02  Aligned_cols=34  Identities=21%  Similarity=0.285  Sum_probs=30.0

Q ss_pred             CCeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           74 NPVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        74 ~~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++|.+|-|     |.|+|+.++.++|++.| .|..+||.+
T Consensus         1 a~I~iys~-----~~Cp~C~~ak~~L~~~~i~y~~~di~~   35 (82)
T d1fova_           1 ANVEIYTK-----ETCPYCHRAKALLSSKGVSFQELPIDG   35 (82)
T ss_dssp             CCEEEEEC-----SSCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred             CcEEEEeC-----CCCHhHHHHHHHHHHcCCCeEEEeccc
Confidence            36888877     68999999999999999 999999854

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=95.98  E-value=0.0019  Score=40.34  Aligned_cols=30  Identities=20%  Similarity=0.346  Sum_probs=26.6

Q ss_pred             CCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           83 VPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        83 tp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +++.|+|+|+.++.++|+++| .|..+|+-+
T Consensus         8 ~~~~~~C~~C~~AK~lL~~~~i~y~~~~i~~   38 (87)
T d1abaa_           8 DSNIHKCGPCDNAKRLLTVKKQPFEFINIMP   38 (87)
T ss_dssp             CTTTSCCHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred             CCCCCCChhHHHHHHHHHHcCCCceeccccc
Confidence            357899999999999999999 999998743

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=95.33  E-value=0.008  Score=35.69  Aligned_cols=32  Identities=19%  Similarity=0.289  Sum_probs=27.8

Q ss_pred             eeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           76 VMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        76 vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      |.+|-+     |.|+|+.++.++|+++| .|..+||.+
T Consensus         3 v~iYt~-----~~C~~C~~ak~~L~~~~i~~~~~~i~~   35 (74)
T d1r7ha_           3 ITLYTK-----PACVQCTATKKALDRAGLAYNTVDISL   35 (74)
T ss_dssp             EEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred             EEEEeC-----CCChhHHHHHHHHHHcCCceEEEEccC
Confidence            556655     79999999999999999 999999864

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.011  Score=35.35  Aligned_cols=33  Identities=12%  Similarity=0.240  Sum_probs=28.0

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceeehhh
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      +|.+|-+     |.|+|..++.++|++.| .|...||.+
T Consensus         2 ki~iYs~-----~~C~~C~~ak~~L~~~~i~y~~~~i~~   35 (76)
T d1h75a_           2 RITIYTR-----NDCVQCHATKRAMENRGFDFEMINVDR   35 (76)
T ss_dssp             CEEEEEC-----TTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred             EEEEEeC-----CCCccHHHHHHHHHhcCceeEEEeecC
Confidence            3566644     78999999999999999 999999853

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=94.81  E-value=0.0037  Score=40.78  Aligned_cols=33  Identities=18%  Similarity=0.293  Sum_probs=28.8

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCccccc
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHE   48 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~   48 (118)
                      .|.|.-|+++.+.|+++|++|.. |++++|-+.+
T Consensus         7 ~~~C~~~rka~~~L~~~~i~~~~~d~~~~p~s~~   40 (114)
T d1z3ea1           7 SPSCTSCRKARAWLEEHEIPFVERNIFSEPLSID   40 (114)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHH
T ss_pred             CCCCHHHHHHHHHHHHCCCCeEEEeeeccCCCHH
Confidence            37899999999999999999999 9999874433

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.60  E-value=0.0012  Score=43.09  Aligned_cols=36  Identities=14%  Similarity=0.103  Sum_probs=30.2

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      .|.|+-||++.+.|+++|++|.. |++++|-+.+.++
T Consensus         7 ~p~Cs~srka~~~L~~~~i~~~~idy~k~pls~~eL~   43 (114)
T d1rw1a_           7 IKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLR   43 (114)
T ss_dssp             CSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCCeEEEEccccCCCHHHHH
Confidence            38999999999999999999999 9988766544443

>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Arsenate reductase ArsC
species: Escherichia coli [TaxId: 562]

Probab=93.89  E-value=0.012  Score=39.70  Aligned_cols=37  Identities=14%  Similarity=0.237  Sum_probs=31.2

Q ss_pred             CCCCCCchHHHHHHHHHcCCCCcc-CCCCCcccccccC
Q 033504           15 SYPSARSSRIVSGSLYHNGMKYST-DVPNDPDTHEDFR   51 (118)
Q Consensus        15 ~~P~CgfS~~~v~~l~~~~~~~~~-dVl~d~d~r~dlK   51 (118)
                      ..|.|.-|+++.+.|+++|++|.. |+++++-+.+.++
T Consensus         6 ~~p~Cs~srkal~~L~~~~i~~~~idy~k~pls~~eL~   43 (138)
T d1j9ba_           6 HNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELV   43 (138)
T ss_dssp             CCTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCCeEEEeeccCCCCHHHHH
Confidence            358899999999999999999999 9999876544443

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.61  E-value=0.029  Score=36.16  Aligned_cols=28  Identities=11%  Similarity=0.142  Sum_probs=25.8

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      .|.|+-|+++.+.|+++| .|...|+++-
T Consensus         7 ~p~Cs~srka~~~L~~~~i~~~~idy~k~   35 (114)
T d1rw1a_           7 IKACDTMKKARTWLDEHKVAYDFHDYKAV   35 (114)
T ss_dssp             CSSCHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred             CCCChHHHHHHHHHHHcCCCeEEEEcccc
Confidence            589999999999999999 9999999763

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=91.46  E-value=0.017  Score=35.23  Aligned_cols=30  Identities=13%  Similarity=0.247  Sum_probs=23.0

Q ss_pred             CeeeeecCCCCCCCCcchHHHHHHHHhcC-Ccceee
Q 033504           75 PVMLYMKGVPEFPQCGFSSLAVRVLGAYS-KFSYFC  109 (118)
Q Consensus        75 ~vvlfmKGtp~~P~CgFS~~~v~iL~~~~-~~~~~d  109 (118)
                      +|++|-|     |.|.|+.++.++|.++| +|..++
T Consensus         2 kvviysk-----~~Cp~C~~aK~ll~~~~~~~~~i~   32 (85)
T d1egoa_           2 QTVIFGR-----SGCPYCVRAKDLAEKLSNERDDFQ   32 (85)
T ss_dssp             EEEEECC-----TTSTHHHHHHHHHHHHHHHHSSCE
T ss_pred             EEEEEeC-----CCCHhHHHHHHHHHHcCCCCCCce
Confidence            4677744     68999999999999987 554433

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=91.12  E-value=0.055  Score=34.83  Aligned_cols=28  Identities=25%  Similarity=0.135  Sum_probs=25.5

Q ss_pred             CCCCcchHHHHHHHHhcC-Ccceeehhhh
Q 033504           86 FPQCGFSSLAVRVLGAYS-KFSYFCSFSI  113 (118)
Q Consensus        86 ~P~CgFS~~~v~iL~~~~-~~~~~dv~~~  113 (118)
                      .|.|.-|+++.+.|+++| .|...|+++-
T Consensus         7 ~~~C~~~rka~~~L~~~~i~~~~~d~~~~   35 (114)
T d1z3ea1           7 SPSCTSCRKARAWLEEHEIPFVERNIFSE   35 (114)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEEETTTS
T ss_pred             CCCCHHHHHHHHHHHHCCCCeEEEeeecc
Confidence            478999999999999999 9999999763

>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type III [TaxId: 4577]

Probab=86.67  E-value=0.28  Score=29.18  Aligned_cols=37  Identities=19%  Similarity=0.330  Sum_probs=27.2

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CC--CCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DV--PNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dV--l~d~d~r~dlK~   52 (118)
                      .|.|++|+++.-+|...|++|+. .|  ...+.-.+++..
T Consensus         8 ~~~sp~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~   47 (81)
T d1aw9a2           8 MPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLA   47 (81)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGG
T ss_pred             CCCChhHHHHHHHHHhcCCCCEEEEecCCCcchhhHHHHH
Confidence            57799999999999999999988 54  344444444443

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.60  E-value=0.43  Score=29.13  Aligned_cols=34  Identities=15%  Similarity=0.190  Sum_probs=27.6

Q ss_pred             CCeeeeecCCCCCCCCc------chHHHHHHHHhcC-Ccceeehhh
Q 033504           74 NPVMLYMKGVPEFPQCG------FSSLAVRVLGAYS-KFSYFCSFS  112 (118)
Q Consensus        74 ~~vvlfmKGtp~~P~Cg------FS~~~v~iL~~~~-~~~~~dv~~  112 (118)
                      ++|.+|+..     .||      .+.++..+|+++| .|...||.+
T Consensus         2 ~~i~vy~ts-----~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~   42 (93)
T d1t1va_           2 SGLRVYSTS-----VTGSREIKSQQSEVTRILDGKRIQYQLVDISQ   42 (93)
T ss_dssp             CCEEEEECS-----SCSCHHHHHHHHHHHHHHHHTTCCCEEEETTS
T ss_pred             CCEEEEEcc-----CcCChhhHHHHHHHHHHHHHCCCceEEEEecC
Confidence            357777665     565      6899999999999 999999954

>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Glutaredoxin 2
species: Escherichia coli [TaxId: 562]

Probab=85.15  E-value=0.11  Score=30.81  Aligned_cols=27  Identities=7%  Similarity=-0.091  Sum_probs=23.6

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CCCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DVPN   42 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dVl~   42 (118)
                      .+.|.||+++.-+|...|++|+. ++..
T Consensus         6 ~~~cP~~~rvr~~l~~kgi~~e~~~~~~   33 (75)
T d1g7oa2           6 YDHCPYCLKARMIFGLKNIPVELHVLLN   33 (75)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred             cCCCCchHHHHHHHHHhCCCcccccccc
Confidence            46799999999999999999998 7654

>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class theta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.26  E-value=0.37  Score=28.26  Aligned_cols=35  Identities=17%  Similarity=0.175  Sum_probs=25.6

Q ss_pred             CCCCchHHHHHHHHHcCCCCcc-C--CCCCcccccccC
Q 033504           17 PSARSSRIVSGSLYHNGMKYST-D--VPNDPDTHEDFR   51 (118)
Q Consensus        17 P~CgfS~~~v~~l~~~~~~~~~-d--Vl~d~d~r~dlK   51 (118)
                      |.|.||+++.-+|...|++|+. .  ...++...+.++
T Consensus         9 ~~sp~~r~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~   46 (79)
T d1ljra2           9 LVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFL   46 (79)
T ss_dssp             TTSHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHH
T ss_pred             CCChHHHHHHHHHHHhCCCCEEEeeeccccccCCHHHH
Confidence            6788899999999999999987 4  444444444443

>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Chloride intracellular channel 1 (clic1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.77  E-value=0.61  Score=28.22  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=27.5

Q ss_pred             eEeeecCC---CCCCCCchHHHHHHHHHcCCCCcc-CC
Q 033504            7 NLIFKGIA---SYPSARSSRIVSGSLYHNGMKYST-DV   40 (118)
Q Consensus         7 ~lfmKG~~---~~P~CgfS~~~v~~l~~~~~~~~~-dV   40 (118)
                      .||.|-..   +..-|.||+++.=+|...|++|.. .|
T Consensus         4 ~l~~ka~~dg~~~~~cPf~~rv~~~L~~kgi~~~~~~v   41 (86)
T d1k0ma2           4 ELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTV   41 (86)
T ss_dssp             EEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             EEEEecCCCcCcCCCCHhHHHHHHHHHHHCCCcEEEEe
Confidence            67877764   335699999999999999999987 44

>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Yeast prion protein ure2p, nitrogen regulation fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.56  E-value=0.47  Score=28.87  Aligned_cols=36  Identities=25%  Similarity=0.207  Sum_probs=26.4

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc---CCCCCcccccccC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST---DVPNDPDTHEDFR   51 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~---dVl~d~d~r~dlK   51 (118)
                      .|.|.|++++.-+|.+.|++|+.   |+...+...+++.
T Consensus        11 ~~~sp~~~kV~~~L~e~gi~ye~~~v~~~~~~~~~~~~~   49 (92)
T d1k0da2          11 HRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFV   49 (92)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHH
T ss_pred             CCCCccHHHHHHHHHHcCCCCEEEEeeccCCcccCHHHH
Confidence            46799999999999999999987   5544443333443

>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class omega GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=0.7  Score=28.51  Aligned_cols=25  Identities=8%  Similarity=0.048  Sum_probs=21.9

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DV   40 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dV   40 (118)
                      .+.|.|++++.-+|...|++|+. .|
T Consensus        25 ~~~sP~~~rv~~~l~~kgi~~e~~~v   50 (98)
T d1eema2          25 MRFCPFAERTRLVLKAKGIRHEVINI   50 (98)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCEEEEEB
T ss_pred             CCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            37899999999999999999987 44

>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.09  E-value=0.64  Score=27.75  Aligned_cols=37  Identities=19%  Similarity=0.298  Sum_probs=26.5

Q ss_pred             CCCCCchHHHHHHHHHcCCCCcc-CC--CCCcccccccCC
Q 033504           16 YPSARSSRIVSGSLYHNGMKYST-DV--PNDPDTHEDFRP   52 (118)
Q Consensus        16 ~P~CgfS~~~v~~l~~~~~~~~~-dV--l~d~d~r~dlK~   52 (118)
                      .|.|.+|+++.=+|.+.|++|+. .|  ...+...+++..
T Consensus         7 ~~~s~~~~~v~~~l~e~gl~~e~~~v~~~~~~~~~~~~~~   46 (84)
T d1gnwa2           7 HPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLS   46 (84)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGG
T ss_pred             CCCChHHHHHHHHHHHcCCCcEeecccCCcccccHHHHHH
Confidence            46788999999999999999987 44  344333344443