Citrus Sinensis ID: 033601

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFdhtkarmpeflwtvaGGTIGTIFLYAAAIAWYKYKRLLES
Flexible Loop (DISEMBL)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES
Low Complexity Region (SEG)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES
Disordered region (IsUnstruct)
**LEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRL***
Disordered Region (DISOPRED)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE*
Disordered Region (DISEMBL)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES
Disordered Region (DISPRO)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q9LJN2	484	Magnesium transporter MRS	yes	no	0.991	0.235	0.798	2e-48
Q8L4S2	444	Magnesium transporter MRS	yes	no	0.991	0.256	0.591	2e-32
A2WY50	444	Magnesium transporter MRS	N/A	no	0.991	0.256	0.591	2e-32
Q01JR9	434	Putative magnesium transp	N/A	no	0.982	0.260	0.561	6e-27
Q7XQQ1	434	Putative magnesium transp	no	no	0.982	0.260	0.561	6e-27
Q8S1N1	418	Magnesium transporter MRS	no	no	0.991	0.272	0.541	2e-24
A2WXD3	418	Magnesium transporter MRS	N/A	no	0.991	0.272	0.541	2e-24
Q9S9N4	442	Magnesium transporter MRS	no	no	0.947	0.246	0.442	1e-23
Q9SAH0	443	Magnesium transporter MRS	no	no	0.947	0.246	0.451	1e-23
Q67UQ7	436	Magnesium transporter MRS	no	no	0.939	0.247	0.464	7e-23

>sp|Q9LJN2|MRS23_ARATH Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1

 Score =  191 bits (484), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/114 (79%), Positives = 99/114 (86%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DGI+NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAFI
Sbjct: 371 MLLEAYFVQIDGILNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVMSAFI 430

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+ GVFGMNITIELF   K     F+WTV GG+IG+I LY  AI W KYKRLLE
Sbjct: 431 AVAGVFGMNITIELFTDNKHGPSRFIWTVIGGSIGSICLYVGAIGWCKYKRLLE 484

Magnesium transporter that may mediate the influx of magnesium.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4S2|MRS2F_ORYSJ Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1

 Score =  137 bits (345), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 86/120 (71%), Gaps = 6/120 (5%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLS LREYVDDTEDYINIMLDDKQN LLQMGVML+TAT+VI+A +
Sbjct: 325 MLLEAYFVQIDGTLNKLSHLREYVDDTEDYINIMLDDKQNQLLQMGVMLSTATVVITAGV 384

Query: 61  ALVGVFGMNITIELF------DHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+VG+FGMNI I L+      +  +A   +F  T  G   G   +Y  A+ W K   LL+
Sbjct: 385 AVVGLFGMNIGISLYADPTNEEEKRASNMKFWETTLGTIAGCTVMYIVAMGWGKRSGLLQ 444

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WY50|MRS2F_ORYSI Magnesium transporter MRS2-F OS=Oryza sativa subsp. indica GN=MRS2-F PE=3 SV=1

 Score =  137 bits (345), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 86/120 (71%), Gaps = 6/120 (5%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLS LREYVDDTEDYINIMLDDKQN LLQMGVML+TAT+VI+A +
Sbjct: 325 MLLEAYFVQIDGTLNKLSHLREYVDDTEDYINIMLDDKQNQLLQMGVMLSTATVVITAGV 384

Query: 61  ALVGVFGMNITIELF------DHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+VG+FGMNI I L+      +  +A   +F  T  G   G   +Y  A+ W K   LL+
Sbjct: 385 AVVGLFGMNIGISLYADPTNEEEKRASNMKFWETTLGTIAGCTVMYIVAMGWGKRSGLLQ 444

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q01JR9|MRS2D_ORYSI Putative magnesium transporter MRS2-D OS=Oryza sativa subsp. indica GN=MRS2-D PE=3 SV=1

 Score =  119 bits (297), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/114 (56%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           +LLE+YFVQ+DG +N LSTLREYV+DTEDYIN+MLD+KQN LLQMG++L+T TLV S  I
Sbjct: 322 ILLESYFVQIDGTLNSLSTLREYVEDTEDYINMMLDEKQNQLLQMGILLSTGTLVSSCAI 381

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+ GVFG+N+ I L+D + A    F    AG   G++ LY AA+  YK   +L+
Sbjct: 382 AVTGVFGINVHISLYD-SPASSAAFPCAAAGIVAGSLALYLAALLCYKRAGILQ 434

Putative magnesium transporter.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q7XQQ1|MRS2D_ORYSJ Putative magnesium transporter MRS2-D OS=Oryza sativa subsp. japonica GN=MRS2-D PE=3 SV=1

 Score =  119 bits (297), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/114 (56%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           +LLE+YFVQ+DG +N LSTLREYV+DTEDYIN+MLD+KQN LLQMG++L+T TLV S  I
Sbjct: 322 ILLESYFVQIDGTLNSLSTLREYVEDTEDYINMMLDEKQNQLLQMGILLSTGTLVSSCAI 381

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+ GVFG+N+ I L+D + A    F    AG   G++ LY AA+  YK   +L+
Sbjct: 382 AVTGVFGINVHISLYD-SPASSAAFPCAAAGIVAGSLALYLAALLCYKRAGILQ 434

Putative magnesium transporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8S1N1|MRS2E_ORYSJ Magnesium transporter MRS2-E OS=Oryza sativa subsp. japonica GN=MRS2-E PE=2 SV=1

 Score =  110 bits (275), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/120 (54%), Positives = 82/120 (68%), Gaps = 6/120 (5%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +N L  +REY DDTEDYINIMLD+KQN LLQMGVMLTTAT+V++A I
Sbjct: 299 MLLEAYFVQIDGTLNTLYHIREYADDTEDYINIMLDEKQNQLLQMGVMLTTATVVVTAGI 358

Query: 61  ALVGVFGMNITIELFDHTKA----RMPEF-LWTVAGGTI-GTIFLYAAAIAWYKYKRLLE 114
            +V +FGMNI I+L    +     RM     W    GT+ G I +Y  AI   +  ++L+
Sbjct: 359 VVVSLFGMNIHIDLMKDPETPEMVRMSNMHFWETTFGTVAGCIAIYLLAIYAGRKSKILQ 418

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WXD3|MRS2E_ORYSI Magnesium transporter MRS2-E OS=Oryza sativa subsp. indica GN=MRS2-E PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/120 (54%), Positives = 82/120 (68%), Gaps = 6/120 (5%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +N L  +REY DDTEDYINIMLD+KQN LLQMGVMLTTAT+V++A I
Sbjct: 299 MLLEAYFVQIDGTLNTLYHIREYADDTEDYINIMLDEKQNQLLQMGVMLTTATVVVTAGI 358

Query: 61  ALVGVFGMNITIELFDHTKA----RMPEF-LWTVAGGTI-GTIFLYAAAIAWYKYKRLLE 114
            +V +FGMNI I+L    +     RM     W    GT+ G I +Y  AI   +  ++L+
Sbjct: 359 VVVSLFGMNIHIDLMKDPETPEMVRMSNMHFWETTFGTVAGCIAIYLLAIYAGRKSKILQ 418

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9S9N4|MRS21_ARATH Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1

 Score =  107 bits (268), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/113 (44%), Positives = 78/113 (69%), Gaps = 4/113 (3%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFV +D  +NKL++L+EY+DDTED+INI LD+ +N L+Q  ++LTTAT V++ F 
Sbjct: 332 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFG 391

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL 113
            + G+FGMN  I+ F+   A    F W +    +    +++A + ++KY+RL+
Sbjct: 392 VVAGIFGMNFEIDFFNQPGA----FRWVLIITGVCGFVIFSAFVWFFKYRRLM 440

Magnesium transporter that may mediate the influx of magnesium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SAH0|MRS2A_ARATH Magnesium transporter MRS2-10 OS=Arabidopsis thaliana GN=MRS2-10 PE=2 SV=1

 Score =  107 bits (268), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/113 (45%), Positives = 78/113 (69%), Gaps = 4/113 (3%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFV +D  +NKL++L+EY+DDTED+INI LD+ +N L+Q  ++LTTAT V++ F 
Sbjct: 333 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFG 392

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL 113
            + G+FGMN  I+ F+   A    F W +A   +  + ++ A + +YK +RL+
Sbjct: 393 VVAGIFGMNFEIDFFEKPGA----FKWVLAITGVCGLVVFLAFLWYYKRRRLM 441

High-affinity magnesium transporter that mediates the influx of magnesium. Involved in tolerance to Aluminum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1

 Score =  105 bits (263), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 6/114 (5%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFV +D  +NKL++L+EY+DDTED+INI LD+ +N L+Q  ++LTTAT V++ F 
Sbjct: 326 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFG 385

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWT-VAGGTIGTIFLYAAAIAWYKYKRLL 113
            + G+FGMN    +F    A    F W  +  G IG  F++   + ++KYKRL+
Sbjct: 386 VVAGIFGMNFETSVFSIQNA----FQWVLIITGVIGA-FIFCGFLWFFKYKRLM 434

Magnesium transporter that may mediate the influx of magnesium.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
449438313	494	PREDICTED: magnesium transporter MRS2-3-	0.991	0.230	0.807	3e-49
297830626	484	hypothetical protein ARALYDRAFT_479481 [	0.991	0.235	0.798	7e-48
356495815	393	PREDICTED: magnesium transporter MRS2-3-	0.991	0.290	0.798	1e-47
356539603	375	PREDICTED: magnesium transporter MRS2-3-	0.991	0.304	0.798	1e-47
225429041	463	PREDICTED: magnesium transporter MRS2-3-	0.991	0.246	0.771	4e-47
225429039	502	PREDICTED: magnesium transporter MRS2-3-	0.991	0.227	0.771	4e-47
356539605	411	PREDICTED: magnesium transporter MRS2-3-	0.991	0.277	0.798	6e-47
30685422	484	magnesium transporter MRS2-3 [Arabidopsi	0.991	0.235	0.798	7e-47
356539607	381	PREDICTED: magnesium transporter MRS2-3-	0.991	0.299	0.798	7e-47
357480695	444	Magnesium transporter [Medicago truncatu	0.991	0.256	0.789	9e-47

>gi|449438313|ref|XP_004136933.1| PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus] gi|449495702|ref|XP_004159919.1| PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus]

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 92/114 (80%), Positives = 101/114 (88%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 381 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 440

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELF+  KA MPEFLWTV GG  GTIFLY  AIAW K+KRLLE
Sbjct: 441 VVAGIFGMNIHIELFESEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE 494

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830626|ref|XP_002883195.1| hypothetical protein ARALYDRAFT_479481 [Arabidopsis lyrata subsp. lyrata] gi|297329035|gb|EFH59454.1| hypothetical protein ARALYDRAFT_479481 [Arabidopsis lyrata subsp. lyrata]

 Score =  194 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 91/114 (79%), Positives = 101/114 (88%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DGI+NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAFI
Sbjct: 371 MLLEAYFVQIDGILNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVMSAFI 430

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+ GVFGMNITIELF   +A    F+WTV GG++G+IFLY  AI W KYKRLLE
Sbjct: 431 AVAGVFGMNITIELFKDNEAGPRRFIWTVIGGSVGSIFLYVGAIGWCKYKRLLE 484

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495815|ref|XP_003516767.1| PREDICTED: magnesium transporter MRS2-3-like [Glycine max]

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 91/114 (79%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 280 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 339

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  KA M +FLWTV G T GTIFLY  AIAW K+KRLLE
Sbjct: 340 VVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539603|ref|XP_003538286.1| PREDICTED: magnesium transporter MRS2-3-like isoform 1 [Glycine max]

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 91/114 (79%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 262 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 321

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  KA M +FLWTV G T GTIFLY  AIAW K+KRLLE
Sbjct: 322 VVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429041|ref|XP_002268374.1| PREDICTED: magnesium transporter MRS2-3-like isoform 3 [Vitis vinifera]

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 88/114 (77%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 350 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 409

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  K+ + EFLWTV GG  G+IFLY  AIAW ++KRLLE
Sbjct: 410 VVAGIFGMNIHIELFDDKKSGVQEFLWTVGGGATGSIFLYVIAIAWCRHKRLLE 463

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429039|ref|XP_002268333.1| PREDICTED: magnesium transporter MRS2-3-like isoform 2 [Vitis vinifera]

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 88/114 (77%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 389 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 448

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  K+ + EFLWTV GG  G+IFLY  AIAW ++KRLLE
Sbjct: 449 VVAGIFGMNIHIELFDDKKSGVQEFLWTVGGGATGSIFLYVIAIAWCRHKRLLE 502

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539605|ref|XP_003538287.1| PREDICTED: magnesium transporter MRS2-3-like isoform 2 [Glycine max]

 Score =  191 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 91/114 (79%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 298 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 357

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  KA M +FLWTV G T GTIFLY  AIAW K+KRLLE
Sbjct: 358 VVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 411

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685422|ref|NP_188598.2| magnesium transporter MRS2-3 [Arabidopsis thaliana] gi|75273604|sp|Q9LJN2.1|MRS23_ARATH RecName: Full=Magnesium transporter MRS2-3; AltName: Full=Magnesium Transporter 4; Short=AtMGT4 gi|9294429|dbj|BAB02549.1| unnamed protein product [Arabidopsis thaliana] gi|23306416|gb|AAN17435.1| unknown protein [Arabidopsis thaliana] gi|25360820|gb|AAN73213.1| MRS2-3 [Arabidopsis thaliana] gi|30387601|gb|AAP31966.1| At3g19640 [Arabidopsis thaliana] gi|332642749|gb|AEE76270.1| magnesium transporter MRS2-3 [Arabidopsis thaliana]

 Score =  191 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 91/114 (79%), Positives = 99/114 (86%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DGI+NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAFI
Sbjct: 371 MLLEAYFVQIDGILNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVMSAFI 430

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
           A+ GVFGMNITIELF   K     F+WTV GG+IG+I LY  AI W KYKRLLE
Sbjct: 431 AVAGVFGMNITIELFTDNKHGPSRFIWTVIGGSIGSICLYVGAIGWCKYKRLLE 484

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539607|ref|XP_003538288.1| PREDICTED: magnesium transporter MRS2-3-like isoform 3 [Glycine max]

 Score =  191 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 91/114 (79%), Positives = 100/114 (87%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 268 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 327

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD  KA M +FLWTV G T GTIFLY  AIAW K+KRLLE
Sbjct: 328 VVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480695|ref|XP_003610633.1| Magnesium transporter [Medicago truncatula] gi|355511968|gb|AES93591.1| Magnesium transporter [Medicago truncatula]

 Score =  190 bits (483), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 99/114 (86%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAYFVQ+DG +NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAF+
Sbjct: 331 MLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFV 390

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
            + G+FGMNI IELFD     M EF+WTV GGT GTIFLY  AIAW K+KRLLE
Sbjct: 391 VVAGIFGMNINIELFDKNLYGMREFMWTVGGGTAGTIFLYVVAIAWCKHKRLLE 444

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2091176	484	MGT4 "magnesium transporter 4"	0.991	0.235	0.798	1e-43
TAIR|locus:2200542	442	MGT2 "magnesium transporter 2"	0.939	0.244	0.456	1.2e-22
TAIR|locus:2025767	443	MGT1 "magnesium transporter 1"	0.939	0.243	0.464	3.3e-22
TAIR|locus:2077665	436	MGT6 "magnesium transporter 6"	0.965	0.254	0.443	4.2e-20
TAIR|locus:2044254	421	MGT3 "magnesium transporter 3"	0.939	0.256	0.446	1.7e-19
TAIR|locus:2174799	394	MGT9 "magnesium transporter 9"	0.956	0.279	0.427	7.7e-19
TAIR|locus:2139905	408	MGT5 "AT4G28580" [Arabidopsis	0.956	0.269	0.333	1.8e-13
UNIPROTKB|F1P344	379	MRS2 "Uncharacterized protein"	0.860	0.261	0.333	1e-08
SGD|S000005981	413	MFM1 "Mitochondrial inner memb	0.939	0.261	0.327	2e-08
POMBASE|SPBC25H2.08c	422	mrs2 "magnesium ion transporte	0.921	0.251	0.303	1.2e-07

TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 91/114 (79%), Positives = 99/114 (86%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYFVQ+DGI+NKLSTLREYVDDTEDYINIMLDDKQN+LLQMGVMLTTATLV+SAFI
Sbjct:   371 MLLEAYFVQIDGILNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVMSAFI 430

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
             A+ GVFGMNITIELF   K     F+WTV GG+IG+I LY  AI W KYKRLLE
Sbjct:   431 AVAGVFGMNITIELFTDNKHGPSRFIWTVIGGSIGSICLYVGAIGWCKYKRLLE 484

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 52/114 (45%), Positives = 80/114 (70%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYFV +D  +NKL++L+EY+DDTED+INI LD+ +N L+Q  ++LTTAT V++ F 
Sbjct:   332 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFG 391

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWT-VAGGTIGTIFLYAAAIAWYKYKRLL 113
              + G+FGMN  I+ F+   A    F W  +  G  G + +++A + ++KY+RL+
Sbjct:   392 VVAGIFGMNFEIDFFNQPGA----FRWVLIITGVCGFV-IFSAFVWFFKYRRLM 440

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 53/114 (46%), Positives = 79/114 (69%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYFV +D  +NKL++L+EY+DDTED+INI LD+ +N L+Q  ++LTTAT V++ F 
Sbjct:   333 MLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFG 392

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVA-GGTIGTIFLYAAAIAWYKYKRLL 113
              + G+FGMN  I+ F+   A    F W +A  G  G + ++ A + +YK +RL+
Sbjct:   393 VVAGIFGMNFEIDFFEKPGA----FKWVLAITGVCGLV-VFLAFLWYYKRRRLM 441

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 4.2e-20, P = 4.2e-20
 Identities = 51/115 (44%), Positives = 76/115 (66%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYF+Q+DG+ NK+ T+REY+DDTEDY+NI LD+++N L+Q+ + LT A+  I+A  
Sbjct:   326 MLLEAYFMQLDGMRNKILTVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFAIAAET 385

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES 115
              L  +FGMNI   L+         F+W+V   T   I L+   + + ++K+LL S
Sbjct:   386 LLASLFGMNIPCPLYS-IHGVFGYFVWSV---TALCIVLFMVTLGYARWKKLLGS 436

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 50/112 (44%), Positives = 74/112 (66%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYFV VD  ++KLS+L+EY+DDTED INI L + QN L+Q  ++LT AT V + F 
Sbjct:   311 MLLEAYFVVVDNTLSKLSSLKEYIDDTEDLINIKLGNVQNQLIQFQLLLTAATFVAAIFA 370

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRL 112
             A+  VFGMN+   +F +      +++  + G  IG  FLY   + ++K+K++
Sbjct:   371 AVTAVFGMNLQDSVFQNPTTF--QYVLLITG--IGCGFLYFGFVLYFKHKKV 418

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0030001 "metal ion transport" evidence=ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 7.7e-19, P = 7.7e-19
 Identities = 50/117 (42%), Positives = 78/117 (66%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYF+Q+D  +N+L+TLREY+DDTEDYINI LD+ +N L+Q+ ++L++ T+ +S + 
Sbjct:   283 MLLEAYFMQIDSTLNRLTTLREYIDDTEDYINIQLDNHRNQLIQLELVLSSGTVCLSMYS 342

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGT--IFLYAAAIAWYKYKRLLES 115
              + G+FGMNI     D     M  F + V  G  GT  + ++   +++ +YK L+ S
Sbjct:   343 LVAGIFGMNIPYTWNDG-HGYM--FKYVV--GLTGTLCVVVFVIIMSYARYKGLVGS 394

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 38/114 (33%), Positives = 68/114 (59%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLEAYF+Q++G+ NK+  ++E++D TE Y+ I+ + ++N L+ + +++      I+A  
Sbjct:   299 MLLEAYFMQLEGMRNKILLMKEHIDSTEAYVKILQNSRRNGLIHLMMLVNIGNYAITAGT 358

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLE 114
              +V +FGMNI I L+  T       +W V    I    L+   + + K+K+LL+
Sbjct:   359 VVVNLFGMNIPIGLYS-TPDIFGYVVWAVVALCI---VLFIVTVGYAKWKKLLD 408

GO:0016020 "membrane" evidence=ISS

GO:0030001 "metal ion transport" evidence=ISS

GO:0046873 "metal ion transmembrane transporter activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA;IMP

UNIPROTKB|F1P344 MRS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 138 (53.6 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 38/114 (33%), Positives = 58/114 (50%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             +LLE Y+ Q + + N+   LR  +DD+E  I I LD  +N ++++ + LT  T  +S F 
Sbjct:   230 LLLENYYRQAEDLANEARELRVLIDDSESIIFINLDSHRNVMMRLNLQLTMGTFSLSLF- 288

Query:    61 ALVGV-FGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL 113
              L+GV FGMN+   L +      P   W V G     I    + + W   +RLL
Sbjct:   289 GLIGVAFGMNLESSLEED-----PRIFWLVTG-----IMFLGSGLIW---RRLL 329

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

SGD|S000005981 MFM1 "Mitochondrial inner membrane magnesium transporter" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 136 (52.9 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 37/113 (32%), Positives = 57/113 (50%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             MLLE Y   VD IV K  +    V  TE+ INI+LD  +N L+ +G+      L +   +
Sbjct:   288 MLLETYHNYVDEIVQKSESAISDVKTTEEIINIILDSNRNELMLLGIRYAIGMLSLGGAL 347

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAW-YKYKRL 112
              L  ++GMN+   + +   A    +L     G I T++LYA  I   +K +R+
Sbjct:   348 FLGSIYGMNLESFIEESNYA----YLTVTILGLISTVWLYAKGIRHLHKLQRM 396

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA;IGI;ISS;IMP

GO:0045016 "mitochondrial magnesium ion transport" evidence=IGI;ISS;IMP

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

POMBASE|SPBC25H2.08c mrs2 "magnesium ion transporter Mrs2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 34/112 (30%), Positives = 59/112 (52%)

Query:     1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
             +LLE Y  QVD IV +   L   +  TE+  NIMLD  +N+L+ +G+ L+  TL +    
Sbjct:   290 LLLETYCKQVDEIVQQTDNLVGNIRSTEEICNIMLDANRNSLMLLGLKLSAMTLGLGFGA 349

Query:    61 ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRL 112
              +  ++GMN+   L +H     P + + +  G+I     + +++   K +RL
Sbjct:   350 VVASLYGMNLQNGLENH-----P-YAFYITTGSIFAFAAFLSSLGILKIRRL 395

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO;ISS

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0045016 "mitochondrial magnesium ion transport" evidence=ISO;ISS

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LJN2	MRS23_ARATH	No assigned EC number	0.7982	0.9913	0.2355	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	115
cd12823	323	cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae	9e-36
pfam01544	291	pfam01544, CorA, CorA-like Mg2+ transporter protei	0.003

>gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family

 Score =  123 bits (312), Expect = 9e-36
 Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFI 60
           MLLEAY  QVD ++NKL  LREY+DDTE+ IN++LD ++N L+++ + L+  TL ++   
Sbjct: 216 MLLEAYLQQVDELLNKLEELREYIDDTEELINLILDSRRNQLMRLELKLSIGTLSLAVGT 275

Query: 61  ALVGVFGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRL 112
            + G+FGMN+   L +   A    F     G  +G+I ++   + + + KRL
Sbjct: 276 LVAGLFGMNLPSGLEESPYA----FWIVTGGSVVGSILIFIVVLRYLRRKRL 323

A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323

>gnl|CDD|216560 pfam01544, CorA, CorA-like Mg2+ transporter protein

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 18/108 (16%)

Query: 8   VQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLT--TATLVISAFIALVGV 65
            +++ ++     LRE +   +D    +L ++ N +++   +LT  +A  +    I   G+
Sbjct: 198 DELERLLEMAEILRERLRSLQDAYLSLLSNRLNRIMK---VLTVVSAIFLPLTLIT--GI 252

Query: 66  FGMNITIELFDHTKARMPEFLWTVAGGTIGTIFLYA--AAIAWYKYKR 111
           +GMN            MPE  W         + L    A +    ++R
Sbjct: 253 YGMNFKG---------MPELDWPYGYPFWIVLGLMLLLAILLILYFRR 291

The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. The family includes the MRS2 protein from yeast that is thought to be an RNA splicing protein. However its membership of this family suggests that its effect on splicing is due to altered magnesium levels in the cell. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
KOG2662	414	consensus Magnesium transporters: CorA family [Ino	99.97
TIGR00383	318	corA magnesium Mg(2+) and cobalt Co(2+) transport	99.93
COG0598	322	CorA Mg2+ and Co2+ transporters [Inorganic ion tra	99.93
PRK09546	324	zntB zinc transporter; Reviewed	99.93
PRK11085	316	magnesium/nickel/cobalt transporter CorA; Provisio	99.92
PF01544	292	CorA: CorA-like Mg2+ transporter protein; InterPro	99.84
PF07332	121	DUF1469: Protein of unknown function (DUF1469); In	93.28
PF03904	230	DUF334: Domain of unknown function (DUF334); Inter	91.26
TIGR02230	100	ATPase_gene1 F0F1-ATPase subunit, putative. This m	90.77
PF10267	395	Tmemb_cc2: Predicted transmembrane and coiled-coil	85.11
PRK15348	249	type III secretion system lipoprotein SsaJ; Provis	83.45

>KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism]

Probab=99.97  E-value=9.2e-31  Score=205.43  Aligned_cols=111  Identities=45%  Similarity=0.737  Sum_probs=107.1

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccC
Q 033601            1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITIELFDHTKA   80 (115)
Q Consensus         1 ~lLe~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~~~~~~~~~~   80 (115)
                      ||||+||+++|++.+++++++|++|++||.+++++|++||++|++++.||+.|.+++..++|+|+||||+++++    ++
T Consensus       304 MLLEaYf~qiD~~~nk~~~Lre~IddTEd~InI~LDs~RN~LiqleL~Lt~gT~~~s~~~~va~ifGMNl~~~l----~~  379 (414)
T KOG2662|consen  304 MLLEAYFMQIDSTLNKLESLREYIDDTEDIINIQLDSNRNELIQLELLLTIGTFCLSVFSVVAGIFGMNLPSSL----EE  379 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh----cc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999998    67


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 033601           81 RMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLLES  115 (115)
Q Consensus        81 ~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl~~  115 (115)
                      +++.|+|++++++++|+.++.+...|+|+||.+++
T Consensus       380 ~~~~F~~vv~~~~~~~~~lf~~i~~~~k~krL~~~  414 (414)
T KOG2662|consen  380 DHYAFKWVVGITFTLCIVLFVVILGYAKLKRLLGL  414 (414)
T ss_pred             CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            88999999999999999999999999999998753

>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)

Probab=99.93  E-value=3.2e-25  Score=170.27  Aligned_cols=99  Identities=15%  Similarity=0.292  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHH----HHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-Ccccccc
Q 033601            4 EAYFVQVDGIVN----KLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHT   78 (115)
Q Consensus         4 e~Y~~~~~~~~~----~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~   78 (115)
                      +.|++|+.++.+    .++.++|.++.+.|.+.+..++++|++||   +||++|++|+|+|+|||+|||||+ .|.    
T Consensus       215 ~~~~~dv~~~~~~l~~~~~~~~e~l~~l~d~~~~~~s~~~N~~mk---~LTvvt~IflP~t~IaGiyGMNf~~mP~----  287 (318)
T TIGR00383       215 REYLRDIYDHILSLLEMIETYRELLSSLMDLYLSLVNNKMNEIMK---ILTVVSTIFIPLTFIAGIYGMNFKFMPE----  287 (318)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCcccCcc----
Confidence            467888666554    45668889999999999999999999999   799999999999999999999998 443    


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           79 KARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        79 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      .+++++|+++.+++    +++++++++|||||||+
T Consensus       288 l~~~~gy~~~l~~m----~~i~~~~~~~fkrk~Wl  318 (318)
T TIGR00383       288 LNWKYGYPAVLIVM----AVIALGPLIYFRRKGWL  318 (318)
T ss_pred             ccchhHHHHHHHHH----HHHHHHHHHHHHHcCCC
Confidence            56777777766654    45566789999999996

The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.

>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]

Probab=99.93  E-value=4e-25  Score=171.22  Aligned_cols=99  Identities=18%  Similarity=0.266  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cccccc
Q 033601            4 EAYFVQVDGIVNK----LSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNITI-ELFDHT   78 (115)
Q Consensus         4 e~Y~~~~~~~~~~----~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~~-~~~~~~   78 (115)
                      +.|++|+.++..+    ++.+++.++.+.|.+.+.+++++|++||   +||++|++|+|+|+|||+|||||+. |.    
T Consensus       219 ~~~l~dv~~~~~~~~~~~~~~~~~l~~l~d~~~s~is~~~N~imk---~LTi~s~iflPpTlIagiyGMNf~~mPe----  291 (322)
T COG0598         219 REYLRDVLDHLTQLIEMLEALRERLSSLLDAYLSLINNNQNEIMK---ILTIVSTIFLPPTLITGFYGMNFKGMPE----  291 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhHHHHcccccCCCCCcC----
Confidence            4677777776654    5677888889999999999999999999   7999999999999999999999984 43    


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           79 KARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        79 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      .+++++||+++++    ++++++++++|||||||+
T Consensus       292 l~~~~Gy~~~l~~----m~~~~~~~~~~frrk~Wl  322 (322)
T COG0598         292 LDWPYGYPIALIL----MLLLALLLYLYFRRKGWL  322 (322)
T ss_pred             CCCcccHHHHHHH----HHHHHHHHHHHHHhcCcC
Confidence            5777777777664    456667899999999996

>PRK09546 zntB zinc transporter; Reviewed

Probab=99.93  E-value=5e-25  Score=170.42  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-Ccccccc
Q 033601            4 EAYFVQVDGIVNK----LSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHT   78 (115)
Q Consensus         4 e~Y~~~~~~~~~~----~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~   78 (115)
                      ..|++|+.++..+    ++++++.++.+.|.+.+.+++++|++||   +||++|++|+|+|+|||+|||||+ .|+    
T Consensus       221 ~~~l~Dv~d~~~~~~~~l~~~~~~~~~l~d~~~s~~s~~~N~~m~---~Ltilt~IflPlT~IaGiyGMNf~~mPe----  293 (324)
T PRK09546        221 RRRMQDIADRLGRGLDDLDACIARTAVLADEIASVMAEAMNRRTY---TMSLMAMVFLPTTFLTGLFGVNLGGIPG----  293 (324)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhccccCCCCC----
Confidence            4688888877654    5667777888999999999999999999   799999999999999999999998 554    


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           79 KARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        79 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      .+++++|++++++    ++++++++++|||||||+
T Consensus       294 l~~~~gy~~~l~i----m~~i~~~~~~~fkrk~Wl  324 (324)
T PRK09546        294 GGWPFGFSIFCLL----LVVLIGGVAWWLKRSKWL  324 (324)
T ss_pred             cCCcchHHHHHHH----HHHHHHHHHHHHHhcccC
Confidence            5677777766654    456666889999999996

>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional

Probab=99.92  E-value=1.4e-24  Score=168.21  Aligned_cols=100  Identities=13%  Similarity=0.162  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccccCC
Q 033601            3 LEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHTKAR   81 (115)
Q Consensus         3 Le~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~~~~   81 (115)
                      +..+++|++++.+..+.+++.++.+.|.+.+.+++++|++||   +||++|++|+|+|+|||+|||||+ .|.    .++
T Consensus       216 ~~~~~~Di~~l~~~~~~~~~~~~~l~d~~~~~i~~~~N~~mk---~lTv~s~if~pptliagiyGMNf~~mP~----~~~  288 (316)
T PRK11085        216 AREILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIK---IFSVVSVVFLPPTLVASSYGMNFEFMPE----LKW  288 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HHHHHHHHHHHHHHHHhhcccccCCCCC----CCC
Confidence            357889999999999999999999999999999999999999   799999999999999999999998 442    345


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           82 MPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        82 ~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      +++|++++++    ++++++++++|||||||+
T Consensus       289 ~~g~~~~l~~----~~~~~~~~~~~f~rk~Wl  316 (316)
T PRK11085        289 SFGYPGAIIL----MILAGLAPYLYFKRKNWL  316 (316)
T ss_pred             cHHHHHHHHH----HHHHHHHHHHHHHHcccC
Confidence            5555544443    445566789999999996

>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]

Probab=99.84  E-value=1.1e-20  Score=141.82  Aligned_cols=98  Identities=19%  Similarity=0.387  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccccCC
Q 033601            3 LEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHTKAR   81 (115)
Q Consensus         3 Le~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~~~~   81 (115)
                      ++...++++.+.++++.+++.++++.+.+.+.+++++|+.||   +||++|++|+|+|+|||+|||||+ .|+    .++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~n~~m~---~LT~~t~iflPlt~i~g~fGMN~~~~p~----~~~  266 (292)
T PF01544_consen  194 LRDLLDRIERLLERAESLRERLESLQDLYQSKLSNRQNRVMK---VLTIVTAIFLPLTFITGIFGMNFKGMPE----LDW  266 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH---HHHHHHHHHHHHHHHTTSTTS-SS---S----SSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhCCccCCCc----cCC
Confidence            344555556667778889999999999999999999999999   799999999999999999999998 554    556


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033601           82 MPEFLWTVAGGTIGTIFLYAAAIAWYKY  109 (115)
Q Consensus        82 ~~~f~~~~~~~~~~~~~~~~~~~~~fk~  109 (115)
                      +++++++.+  ++++++++++.++||||
T Consensus       267 ~~g~~~~~~--~~~~~~~~~~~~~~~kR  292 (292)
T PF01544_consen  267 PYGYFFVII--LGLMILVAILLYWWFKR  292 (292)
T ss_dssp             SS-SHHH----HHHHHHHHHHHHCCTTS
T ss_pred             ccHHHHHHH--HHHHHHHHHHHHHheeC
Confidence            665555432  33456666677888875

CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.

>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like

Probab=93.28  E-value=1.6  Score=28.89  Aligned_cols=53  Identities=17%  Similarity=0.218  Sum_probs=32.6

Q ss_pred             HHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 033601           18 STLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT   71 (115)
Q Consensus        18 ~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~   71 (115)
                      +++++.+++-.|+....+..+..+..+ .+.+.+++.+++..+++...++-.+-
T Consensus        10 ~~~~~lv~~~i~La~~E~~~~~~~~~~-~~~~~~~a~vl~~~~l~~l~~al~~~   62 (121)
T PF07332_consen   10 DDLSTLVRTRIELAKAELREKARRLGR-GLALLVLAAVLALLALLFLLVALVFA   62 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444666666777777777777665 23455666666666666666666654

The function is not known.

>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function

Probab=91.26  E-value=3.7  Score=30.94  Aligned_cols=47  Identities=13%  Similarity=0.085  Sum_probs=20.4

Q ss_pred             HHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 033601           17 LSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALV   63 (115)
Q Consensus        17 ~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~   63 (115)
                      +..+++..+...+-+....+..+++.-.+-.-++++-.+|+..+++.
T Consensus       122 i~k~r~e~~~ml~evK~~~E~y~k~~k~~~~gi~aml~Vf~LF~lvm  168 (230)
T PF03904_consen  122 IKKVREENKSMLQEVKQSHEKYQKRQKSMYKGIGAMLFVFMLFALVM  168 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            33444444444444444444333333222114555555555555544

>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative

Probab=90.77  E-value=3.4  Score=27.27  Aligned_cols=25  Identities=12%  Similarity=0.024  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCC
Q 033601           48 MLTTATLVISAFIALVGVFGMNITI   72 (115)
Q Consensus        48 ~Lti~t~i~~p~t~i~g~fGMN~~~   72 (115)
                      .++.++..++.+++++.+.|.=++.
T Consensus        44 ~~g~IG~~~v~pil~G~~lG~WLD~   68 (100)
T TIGR02230        44 MFGLIGWSVAIPTLLGVAVGIWLDR   68 (100)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5888889999999999999998874

This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.

>PF10267 Tmemb_cc2: Predicted transmembrane and coiled-coil 2 protein; InterPro: IPR019394 This family of transmembrane coiled-coil containing proteins is conserved from worms to humans

Probab=85.11  E-value=18  Score=29.42  Aligned_cols=24  Identities=17%  Similarity=0.295  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 033601           46 GVMLTTATLVISAFIALVGVFGMNITIEL   74 (115)
Q Consensus        46 ~l~Lti~t~i~~p~t~i~g~fGMN~~~~~   74 (115)
                      ++.||++++++...+.+++     ++.|+
T Consensus       345 nllL~l~~vlLv~vSt~~~-----~~~Pl  368 (395)
T PF10267_consen  345 NLLLTLLTVLLVFVSTVAN-----CPLPL  368 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhc-----CCcHH
Confidence            4677777777776666654     45665

Its function is unknown.

>PRK15348 type III secretion system lipoprotein SsaJ; Provisional

Probab=83.45  E-value=1.9  Score=32.85  Aligned_cols=10  Identities=10%  Similarity=0.145  Sum_probs=7.5

Q ss_pred             HHhcCCCCCc
Q 033601           64 GVFGMNITIE   73 (115)
Q Consensus        64 g~fGMN~~~~   73 (115)
                      .++|||+..+
T Consensus       200 ~~~~~~~~~~  209 (249)
T PRK15348        200 TFWIMDVINA  209 (249)
T ss_pred             cccccccccc
Confidence            3789999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	115
3rkg_A	261	Magnesium transporter MRS2, mitochondrial; matrix	1e-13

>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261

 Score = 63.7 bits (154), Expect = 1e-13
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 1   MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNL 42
           ML+E Y+ Q D  V +  +L + +  TE+ +NI+LD  +N+L
Sbjct: 220 MLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSL 261

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	115
4ev6_A	339	Magnesium transport protein CORA; membrane protein	99.93
2iub_A	363	CORA, divalent cation transport-related protein; m	99.93
3rkg_A	261	Magnesium transporter MRS2, mitochondrial; matrix	98.85
4egw_A	280	Magnesium transport protein CORA; magnesium transp	96.79
3ck6_A	252	Putative membrane transport protein; APC91421.1, Z	96.42
3nvo_A	264	Zinc transport protein ZNTB; alpha-beta-alpha sand	84.65
2y6x_A	113	PSB27, photosystem II 11 KD protein; photosynthesi	84.16
2kmf_A	115	Photosystem II 11 kDa protein; PSB27, structure, h	83.14

>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}

Probab=99.93  E-value=1.6e-25  Score=172.83  Aligned_cols=99  Identities=17%  Similarity=0.248  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHH----HHHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-Ccccccc
Q 033601            4 EAYFVQVDGIV----NKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHT   78 (115)
Q Consensus         4 e~Y~~~~~~~~----~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~   78 (115)
                      +.|++|+.++.    +.++.+++.++++.|.+.+..++++|++||   +||++|++|+|+|+|||+|||||+ .|.    
T Consensus       236 ~~~l~dv~~~~~~l~e~~~~~~e~l~~l~d~~~s~is~~~N~~mk---~LTiit~IflP~T~IaGiyGMNf~~mPe----  308 (339)
T 4ev6_A          236 RENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMK---ILTMVTTIFAVPMWITGIYGMNFSYLPL----  308 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHSSHHHHHHHHTTCCCSCCTT----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhccCcCCCCCC----
Confidence            45777776654    455777888899999999999999999999   799999999999999999999998 554    


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           79 KARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        79 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      .+++++||++++++    +++++++++|||||||+
T Consensus       309 l~~~~gy~~~l~~m----~~~~~~~~~~fkrk~WL  339 (339)
T 4ev6_A          309 ANNPQGFWLVMALM----VVIIMIFVYIFRRSGWI  339 (339)
T ss_dssp             SSCTTHHHHHHHHH----HHHHHHHHHHHHTTTCC
T ss_pred             ccCchHHHHHHHHH----HHHHHHHHHHHHHcCCC
Confidence            67888888877654    45566789999999997

>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A

Probab=99.93  E-value=3.9e-26  Score=177.72  Aligned_cols=99  Identities=19%  Similarity=0.277  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-Ccccccc
Q 033601            4 EAYFVQVDGIVNK----LSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHT   78 (115)
Q Consensus         4 e~Y~~~~~~~~~~----~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~   78 (115)
                      +.|++|+.++..+    ++.++|.++++.|.+.+.+++++|++||   +||++|++|+|+|+|||+|||||+ .|.    
T Consensus       260 ~~~lrDv~d~~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~imk---~LTiit~IflP~T~IaGiyGMNf~~mPe----  332 (363)
T 2iub_A          260 VPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMK---VLTIIATIFMPLTFIAGIYGMNFEYMPE----  332 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTSCC------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhcccCCCCCc----
Confidence            4688888887654    5677888999999999999999999999   799999999999999999999998 543    


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 033601           79 KARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKRLL  113 (115)
Q Consensus        79 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~wl  113 (115)
                      .+++++|+++++++    +++++++++|||||||+
T Consensus       333 l~~~~Gy~~~l~~m----~~i~~~~~~~Fkrk~Wl  363 (363)
T 2iub_A          333 LRWKWGYPVVLAVM----GVIAVIMVVYFKKKKWL  363 (363)
T ss_dssp             ------CHHHHHHH----HHHHHHHHTTTTSCC--
T ss_pred             ccCcHHHHHHHHHH----HHHHHHHHHHHHHcccC
Confidence            57888887776654    45566789999999996

>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}

Probab=98.85  E-value=2.1e-09  Score=80.65  Aligned_cols=42  Identities=38%  Similarity=0.673  Sum_probs=38.5

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHH
Q 033601            1 MLLEAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDDKQNNL   42 (115)
Q Consensus         1 ~lLe~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~   42 (115)
                      ||||+||+++|++.++++.+++++++++|.+++.+|++||++
T Consensus       220 mLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i~i~LD~~RN~L  261 (261)
T 3rkg_A          220 MLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSL  261 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence            799999999999999999999999999999999999999974

>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}

Probab=96.79  E-value=0.0015  Score=48.30  Aligned_cols=41  Identities=17%  Similarity=0.115  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHhHHHHHHHhH
Q 033601            4 EAYFVQVDGIVNK----LSTLREYVDDTEDYINIMLDDKQNNLLQ   44 (115)
Q Consensus         4 e~Y~~~~~~~~~~----~~~l~~~i~~~~~~~~~~l~~~~N~~m~   44 (115)
                      +.|++|+.++..+    ++..++.++++.|.+.+..++++|++||
T Consensus       236 ~~~l~Dv~dh~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~iMK  280 (280)
T 4egw_A          236 RENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMK  280 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            5799999887655    4667788888899999999999999997

>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*

Probab=96.42  E-value=0.0051  Score=44.54  Aligned_cols=40  Identities=15%  Similarity=0.052  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHhHHHHHHHh
Q 033601            4 EAYFVQVDGIVNK----LSTLREYVDDTEDYINIMLDDKQNNLL   43 (115)
Q Consensus         4 e~Y~~~~~~~~~~----~~~l~~~i~~~~~~~~~~l~~~~N~~m   43 (115)
                      +.|++|+.++..+    ++.++|.+..+.|.+.+..++++|++|
T Consensus       209 ~~~~rdv~d~~~~~~e~i~~~re~~~~l~d~~~s~~s~~~N~~m  252 (252)
T 3ck6_A          209 PHQYRFAHNNITRINETIEFYLGEVALFQDEIKHNRDEKTNKNS  252 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            4699999887755    578899999999999999999999986

>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A

Probab=84.65  E-value=2.4  Score=30.31  Aligned_cols=31  Identities=13%  Similarity=0.127  Sum_probs=20.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHH
Q 033601            4 EAYFVQVDGIVNKLSTLREYVDDTEDYINIMLDD   37 (115)
Q Consensus         4 e~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~   37 (115)
                      ..|++|+.++..++.+.   ++..+|..+..+|.
T Consensus       226 ~~~l~Dv~d~~~~~~e~---~~~~re~l~~l~d~  256 (264)
T 3nvo_A          226 RRRMQDIADRLGRGLDE---IDACIARTGIMADE  256 (264)
T ss_dssp             HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence            56889988888776555   55555555555543

>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}

Probab=84.16  E-value=4.8  Score=26.19  Aligned_cols=67  Identities=12%  Similarity=0.171  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHHHHH----------HHHHHhHHHHHHHHhHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHh---cC
Q 033601            3 LEAYFVQVDGIVNKLSTL----------REYVDDTEDYINIMLDDKQNN-LLQMGVMLTTATLVISAFIALVGVF---GM   68 (115)
Q Consensus         3 Le~Y~~~~~~~~~~~~~l----------~~~i~~~~~~~~~~l~~~~N~-~m~~~l~Lti~t~i~~p~t~i~g~f---GM   68 (115)
                      -..|.+|..++.+.+.+.          .+..+.+++.++.-++.-|++ -..   .+.-.++.-..+..++|.|   | 
T Consensus         9 ~~~Y~~dT~~Vv~~lr~~l~l~~d~~~~~~a~~~ar~~ind~vsrYRr~~~v~---g~~Sfttm~tAlNaLAGHY~s~g-   84 (113)
T 2y6x_A            9 TGNFREDTLALISSLREAIALPENDPNKKAAQAEARKKLNDFFALYRRDDSLR---SLSSFMTMQTALNSLAGHYSSYP-   84 (113)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHTTCHHHH---TSHHHHHHHHHHHHHHHHHHHCT-
T ss_pred             CccHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCcc---ccchHHHHHHHHHHHHHHHhhcC-
Confidence            456888888877766433          566788888999888865543 333   3777777788888888876   7 


Q ss_pred             CCCCc
Q 033601           69 NITIE   73 (115)
Q Consensus        69 N~~~~   73 (115)
                      |-|.|
T Consensus        85 ~~PlP   89 (113)
T 2y6x_A           85 NRPLP   89 (113)
T ss_dssp             TSCCC
T ss_pred             CCCCC
Confidence            77665

>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A

Probab=83.14  E-value=4.3  Score=26.47  Aligned_cols=67  Identities=19%  Similarity=0.197  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHH----------HHHHHHhHHHHHHHHhHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHh---cC
Q 033601            3 LEAYFVQVDGIVNKLST----------LREYVDDTEDYINIMLDDKQNN-LLQMGVMLTTATLVISAFIALVGVF---GM   68 (115)
Q Consensus         3 Le~Y~~~~~~~~~~~~~----------l~~~i~~~~~~~~~~l~~~~N~-~m~~~l~Lti~t~i~~p~t~i~g~f---GM   68 (115)
                      -..|.+|..++.+.+.+          ..+..+.+++.++.-++.-|++ -..   .+.-.++.-..+..++|.|   | 
T Consensus        13 ~~~Y~~dT~~Vv~~lr~~l~l~~d~~~~~~a~~~ar~~ind~vsrYRr~~~v~---g~~Sf~tm~tAlNaLAGHY~s~g-   88 (115)
T 2kmf_A           13 TGNYSQDTLTVIATLREAIDLPQDAPNRQEVQDTARGQINDYISRYRRKGDAG---GLKSFTTMQTALNSLAGYYTSYG-   88 (115)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHTHHHHCSS---SCHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             CccHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCcc---ccchHHHHHHHHHHHHHHHhhcC-
Confidence            45688888887777643          3567888899999999865544 333   3677777777788888876   7 


Q ss_pred             CCCCc
Q 033601           69 NITIE   73 (115)
Q Consensus        69 N~~~~   73 (115)
                      |-|.|
T Consensus        89 ~~PlP   93 (115)
T 2kmf_A           89 ARPIP   93 (115)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            77765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	115
d2iuba2	64	Magnesium transport protein CorA {Thermotoga marit	99.81
d2etda1	149	Hypothetical protein TM0961 {Thermotoga maritima [	81.8
d1ez3a_	124	Syntaxin 1A N-terminal domain {Rat (Rattus norvegi	81.02

>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}

class: Membrane and cell surface proteins and peptides
fold: Transmembrane helix hairpin
superfamily: Magnesium transport protein CorA, transmembrane region
family: Magnesium transport protein CorA, transmembrane region
domain: Magnesium transport protein CorA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=4.1e-21  Score=115.14  Aligned_cols=63  Identities=17%  Similarity=0.292  Sum_probs=42.6

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 033601           38 KQNNLLQMGVMLTTATLVISAFIALVGVFGMNIT-IELFDHTKARMPEFLWTVAGGTIGTIFLYAAAIAWYKYKR  111 (115)
Q Consensus        38 ~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~fk~k~  111 (115)
                      |+|+.||   +||++|++|+|+|+++|+||||++ .|.    .+++++||++++++    +++.++.+++|||||
T Consensus         1 r~N~~mk---~lT~it~iflP~t~i~gifGMN~~~~P~----~~~~~~~~~~~~~~----~~~~~~~~~~f~rkk   64 (64)
T d2iuba2           1 KTNEVMK---VLTIIATIFMPLTFIAGIYGMNFEYMPE----LRWKWGYPVVLAVM----GVIAVIMVVYFKKKK   64 (64)
T ss_dssp             HHHHHHH---HHHHHHHHHHHHHHHTTSCC------------------CHHHHHHH----HHHHHHHHTTTTSCC
T ss_pred             ChhHHHH---HHHHHHHHHHHHHHHHhhhccCCCCCCC----CCccHHHHHHHHHH----HHHHHHHHHHHhccC
Confidence            6899999   799999999999999999999997 554    67888888776654    344556788899886

>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Bromodomain-like
superfamily: LemA-like
family: LemA-like
domain: Hypothetical protein TM0961
species: Thermotoga maritima [TaxId: 2336]

Probab=81.80  E-value=2.6  Score=26.54  Aligned_cols=48  Identities=10%  Similarity=0.160  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 033601           11 DGIVNKLSTLREYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVISAFIALVGVFGMNI   70 (115)
Q Consensus        11 ~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~~p~t~i~g~fGMN~   70 (115)
                      .++.++++...+.|...++.+|.....- |..++           -.|.++|+++||..-
T Consensus        94 ~~l~~~l~~~E~~Ia~aR~~YN~~V~~y-N~~i~-----------~FP~~lvA~~~gf~~  141 (149)
T d2etda1          94 RQLMDELAGTENRIAVARRDYNEAVKKY-NTAIK-----------KFPGVIFAKMFGFEE  141 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHC-----------C----------CCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-----------hccHHHHHHHcCCCC
Confidence            3345556666666666666666655443 33333           369999999999654

>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: STAT-like
superfamily: t-snare proteins
family: t-snare proteins
domain: Syntaxin 1A N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.02  E-value=3.5  Score=24.82  Aligned_cols=34  Identities=21%  Similarity=0.438  Sum_probs=28.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 033601            2 LLEAYFVQVDGIVNKLSTLREYVDDTEDYINIML   35 (115)
Q Consensus         2 lLe~Y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l   35 (115)
                      .++.||.+++++-..+..+++.++.+.+...-.+
T Consensus         4 ~m~~Ff~eV~~Ir~~I~~i~~~v~~i~~~~~~~l   37 (124)
T d1ez3a_           4 FMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAIL   37 (124)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3789999999999999999998888888765544