Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value Query 112
PTZ00100 116
PTZ00100, PTZ00100, DnaJ chaperone protein; Provis
8e-24 PRK14296 372
PRK14296, PRK14296, chaperone protein DnaJ; Provis
4e-05 smart00271 60
smart00271, DnaJ, DnaJ molecular chaperone homolog
7e-05 cd06257 55
cd06257, DnaJ, DnaJ domain or J-domain
8e-05 pfam00226 63
pfam00226, DnaJ, DnaJ domain
0.003 PTZ00037 421
PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov
0.003
>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional
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Score = 87.6 bits (217), Expect = 8e-24
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 1 MVAPLIAGMAVAAAAYAGKYGIRAWQAFKARPPT--------------ARMRKFYEGGFQ 46
M+ P++A + A +YG R + K + K GF+
Sbjct: 1 MMWPIVA-LTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLKGFE 59
Query: 47 PVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLR 103
M++ EA IL + + E+++EAH+++M+ NHPD GGS Y+ASK+NEAKD++L+
Sbjct: 60 NPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLLK 116
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 40.7 bits (95), Expect = 4e-05
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPD---AGGSHYLASKINEAKDIMLRRT 105
M +++ +LGV ++ +++++A+R++ HPD + +H +INEA D++L +
Sbjct: 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD 60
Query: 106 K 106
K
Sbjct: 61 K 61
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain
Back Show alignment and domain information
Score = 37.6 bits (88), Expect = 7e-05
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 57 ILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLAS-----KINEAKDIM 101
ILGV +++K+A+R++ + HPD + +INEA +++
Sbjct: 6 ILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVL 55
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain
Back Show alignment and domain information
Score = 37.1 bits (87), Expect = 8e-05
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 57 ILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLA----SKINEAKDI 100
ILGV E++K+A+R++ + HPD A +INEA ++
Sbjct: 5 ILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEV 52
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain
Back Show alignment and domain information
Score = 33.3 bits (77), Expect = 0.003
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 57 ILGVRESTPTEKVKEAHRRVMVANHPD----AGGSHYLASKINEAKDI 100
ILGV E++K+A+R++ + HPD + +INEA ++
Sbjct: 5 ILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEV 52
DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional
Back Show alignment and domain information
Score = 35.6 bits (82), Expect = 0.003
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 20/76 (26%)
Query: 32 PPTARMR------KFYEGGFQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG 85
R + K YE +L + + T ++K+A+R++ + +HPD G
Sbjct: 16 FDGGRRKREVDNEKLYE--------------VLNLSKDCTTSEIKKAYRKLAIKHHPDKG 61
Query: 86 GSHYLASKINEAKDIM 101
G +I+ A +++
Sbjct: 62 GDPEKFKEISRAYEVL 77
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
112
KOG0723 112
consensus Molecular chaperone (DnaJ superfamily) [
99.96 PF03656 127
Pam16: Pam16; InterPro: IPR005341 The Pam16 protei
99.95 PTZ00100 116
DnaJ chaperone protein; Provisional
99.95 KOG3442 132
consensus Uncharacterized conserved protein [Funct
99.87 COG0484 371
DnaJ DnaJ-class molecular chaperone with C-termina
99.7 PHA03102 153
Small T antigen; Reviewed
99.66 PTZ00037 421
DnaJ_C chaperone protein; Provisional
99.64 KOG0713 336
consensus Molecular chaperone (DnaJ superfamily) [
99.61 smart00271 60
DnaJ DnaJ molecular chaperone homology domain.
99.61 cd06257 55
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho
99.58 PRK14296 372
chaperone protein DnaJ; Provisional
99.57 PF00226 64
DnaJ: DnaJ domain; InterPro: IPR001623 The prokary
99.56 PRK14288 369
chaperone protein DnaJ; Provisional
99.51 PRK14286 372
chaperone protein DnaJ; Provisional
99.51 PRK14279 392
chaperone protein DnaJ; Provisional
99.51 PRK14299 291
chaperone protein DnaJ; Provisional
99.51 PRK14287 371
chaperone protein DnaJ; Provisional
99.5 PRK14282 369
chaperone protein DnaJ; Provisional
99.49 PRK14276 380
chaperone protein DnaJ; Provisional
99.48 PRK14283 378
chaperone protein DnaJ; Provisional
99.47 PRK14280 376
chaperone protein DnaJ; Provisional
99.47 PRK14285 365
chaperone protein DnaJ; Provisional
99.47 PRK14298 377
chaperone protein DnaJ; Provisional
99.47 KOG0712 337
consensus Molecular chaperone (DnaJ superfamily) [
99.47 PRK10767 371
chaperone protein DnaJ; Provisional
99.47 PRK14294 366
chaperone protein DnaJ; Provisional
99.46 PRK14301 373
chaperone protein DnaJ; Provisional
99.46 PRK14297 380
chaperone protein DnaJ; Provisional
99.46 PRK10266 306
curved DNA-binding protein CbpA; Provisional
99.45 PRK14295 389
chaperone protein DnaJ; Provisional
99.45 PRK14278 378
chaperone protein DnaJ; Provisional
99.45 PRK09430 267
djlA Dna-J like membrane chaperone protein; Provis
99.44 PRK14281 397
chaperone protein DnaJ; Provisional
99.44 PHA02624 647
large T antigen; Provisional
99.44 PRK14277 386
chaperone protein DnaJ; Provisional
99.42 PRK14291 382
chaperone protein DnaJ; Provisional
99.41 PRK14300 372
chaperone protein DnaJ; Provisional
99.41 KOG0721 230
consensus Molecular chaperone (DnaJ superfamily) [
99.39 KOG0717 508
consensus Molecular chaperone (DnaJ superfamily) [
99.38 PRK14284 391
chaperone protein DnaJ; Provisional
99.38 PRK14292 371
chaperone protein DnaJ; Provisional
99.38 TIGR02349 354
DnaJ_bact chaperone protein DnaJ. This model repre
99.38 PRK14289 386
chaperone protein DnaJ; Provisional
99.37 KOG0716 279
consensus Molecular chaperone (DnaJ superfamily) [
99.37 PRK14290 365
chaperone protein DnaJ; Provisional
99.36 KOG0715 288
consensus Molecular chaperone (DnaJ superfamily) [
99.35 PRK14293 374
chaperone protein DnaJ; Provisional
99.33 KOG0718 546
consensus Molecular chaperone (DnaJ superfamily) [
99.28 KOG0691 296
consensus Molecular chaperone (DnaJ superfamily) [
99.27 COG2214 237
CbpA DnaJ-class molecular chaperone [Posttranslati
99.22 PRK05014 171
hscB co-chaperone HscB; Provisional
99.19 PTZ00341 1136
Ring-infected erythrocyte surface antigen; Provisi
99.19 PRK01356 166
hscB co-chaperone HscB; Provisional
99.18 TIGR03835 871
termin_org_DnaJ terminal organelle assembly protei
99.17 PRK00294 173
hscB co-chaperone HscB; Provisional
99.16 PRK03578 176
hscB co-chaperone HscB; Provisional
99.12 KOG0719 264
consensus Molecular chaperone (DnaJ superfamily) [
99.06 KOG1789 2235
consensus Endocytosis protein RME-8, contains DnaJ
99.04 PRK01773 173
hscB co-chaperone HscB; Provisional
98.93 KOG0720 490
consensus Molecular chaperone (DnaJ superfamily) [
98.92 KOG0722 329
consensus Molecular chaperone (DnaJ superfamily) [
98.9 KOG0624 504
consensus dsRNA-activated protein kinase inhibitor
98.74 TIGR00714 157
hscB Fe-S protein assembly co-chaperone HscB. This
98.71 KOG0550 486
consensus Molecular chaperone (DnaJ superfamily) [
98.65 KOG1150 250
consensus Predicted molecular chaperone (DnaJ supe
98.63 KOG0714 306
consensus Molecular chaperone (DnaJ superfamily) [
98.62 COG5407 610
SEC63 Preprotein translocase subunit Sec63 [Intrac
98.55 KOG0568 342
consensus Molecular chaperone (DnaJ superfamily) [
98.43 COG5269 379
ZUO1 Ribosome-associated chaperone zuotin [Transla
97.65 COG1076 174
DjlA DnaJ-domain-containing proteins 1 [Posttransl
97.65 PF13446 62
RPT: A repeated domain in UCH-protein
97.13 KOG3192 168
consensus Mitochondrial J-type chaperone [Posttran
97.1 KOG0431 453
consensus Auxilin-like protein and related protein
96.48 PF11833 194
DUF3353: Protein of unknown function (DUF3353); In
96.02 COG1076 174
DjlA DnaJ-domain-containing proteins 1 [Posttransl
94.87 PF14687 112
DUF4460: Domain of unknown function (DUF4460)
82.85
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Hide alignment and domain information
Probab=99.96 E-value=2.6e-29 Score=167.53 Aligned_cols=105 Identities=62% Similarity=0.975 Sum_probs=98.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCchhhhhhhhCCCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 033745 1 MVAPLIAGMAVAAAAYAGKYGIR----AWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRESTPTEKVKEAHRRV 76 (112)
Q Consensus 1 m~~~~~~~l~~~~~~~~~r~~~~----A~~~~~~~~~~~~~~~~~~~~~~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l 76 (112)
|+.++++|++|+++++.+|++++ +|+.....+..+.++.|+.|+|++.|+..||..||||.++++.+.||++||++
T Consensus 1 ~~~~i~~G~gvaa~a~ag~~gl~~~~~~~qa~~~~~~~~~~~~~y~GGF~~kMsr~EA~lIL~v~~s~~k~KikeaHrri 80 (112)
T KOG0723|consen 1 MVSPIIAGLGVAALAFAGRYGLWMKTLAKQAFKTLPKGPFFGAFYKGGFEPKMSRREAALILGVTPSLDKDKIKEAHRRI 80 (112)
T ss_pred CchhHHHhHHHHHHHHhchhhhhchhHHHHHHHHcCCCcchhhhhhcccccccchHHHHHHhCCCccccHHHHHHHHHHH
Confidence 88999999999999999999999 77777777766777899999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCHHHHHHHHHHHHHhcccc
Q 033745 77 MVANHPDAGGSHYLASKINEAKDIMLRRT 105 (112)
Q Consensus 77 ~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~ 105 (112)
+..||||+|||||+..+||||+++|+...
T Consensus 81 M~~NHPD~GGSPYlAsKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 81 MLANHPDRGGSPYLASKINEAKDLLEGTS 109 (112)
T ss_pred HHcCCCcCCCCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999998654
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []
Back Show alignment and domain information
Probab=99.95 E-value=2.3e-28 Score=168.78 Aligned_cols=106 Identities=28% Similarity=0.362 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch-hh-hhh----hhCCCCCCCCHHHHHHHhCCCCCCCHHHHHHHHH
Q 033745 1 MVAPLIAGMAVAAAAYAGKYGIRAWQAFKARPPTA-RM-RKF----YEGGFQPVMTRREAALILGVRESTPTEKVKEAHR 74 (112)
Q Consensus 1 m~~~~~~~l~~~~~~~~~r~~~~A~~~~~~~~~~~-~~-~~~----~~~~~~~~m~~~ea~~iLgl~~~~~~~eik~~yr 74 (112)
|+++++++|+|+++.+++|+|.+||||+..+.... .+ ... ........||.+||++||||++..++++|.++|+
T Consensus 1 Ma~riiaqiiv~G~~vvgRAf~~AyrQA~aa~~~a~~a~~~a~~~~~a~~~~~~Mtl~EA~~ILnv~~~~~~eeI~k~y~ 80 (127)
T PF03656_consen 1 MAKRIIAQIIVTGGQVVGRAFTQAYRQAAAAAQAAAGAGQNASARGAAASNSKGMTLDEARQILNVKEELSREEIQKRYK 80 (127)
T ss_dssp --------------------------------------------------------HHHHHHHHT--G--SHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhhcCCCCHHHHHHHcCCCCccCHHHHHHHHH
Confidence 99999999999999999999999999998543221 11 111 1112334799999999999999999999999999
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHhccccc
Q 033745 75 RVMVANHPDAGGSHYLASKINEAKDIMLRRTK 106 (112)
Q Consensus 75 ~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~k 106 (112)
+|+..|+|++|||+|+++||.+|+|+|..+.+
T Consensus 81 ~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~El~ 112 (127)
T PF03656_consen 81 HLFKANDPSKGGSFYLQSKVFRAKERLEQELK 112 (127)
T ss_dssp HHHHHT-CCCTS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997653
In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
>PTZ00100 DnaJ chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.95 E-value=8e-27 Score=158.76 Aligned_cols=102 Identities=36% Similarity=0.663 Sum_probs=89.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----------hhhhhhh----hCCCCCCCCHHHHHHHhCCCCCCCH
Q 033745 1 MVAPLIAGMAVAAAAYAGKYGIRAWQAFKARPPT----------ARMRKFY----EGGFQPVMTRREAALILGVRESTPT 66 (112)
Q Consensus 1 m~~~~~~~l~~~~~~~~~r~~~~A~~~~~~~~~~----------~~~~~~~----~~~~~~~m~~~ea~~iLgl~~~~~~ 66 (112)
|.+|+++ |++.++.+++|+++++|++....++. +..+.++ ..+|+..|+.+|||+||||+++++.
T Consensus 1 ~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~~~Ms~~eAy~ILGv~~~As~ 79 (116)
T PTZ00100 1 MMWPIVA-LTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLKGFENPMSKSEAYKILNISPTASK 79 (116)
T ss_pred CcchHHH-HHHhHHHHHHHHHHHHHHHHhhccCccccCCchhhhHHHHHHHhccccccccCCCCHHHHHHHcCCCCCCCH
Confidence 8899998 99999999999999999877665431 1233433 4589999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcc
Q 033745 67 EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLR 103 (112)
Q Consensus 67 ~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~ 103 (112)
+||+++||+|+++||||++||+|.+++|++|||+|.+
T Consensus 80 ~eIkkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~k 116 (116)
T PTZ00100 80 ERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLLK 116 (116)
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999963
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Back Show alignment and domain information
Probab=99.87 E-value=5.1e-22 Score=135.50 Aligned_cols=104 Identities=26% Similarity=0.325 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhh-h-------hhCCCCCCCCHHHHHHHhCCCCCCCHHHHHHHHH
Q 033745 3 APLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRK-F-------YEGGFQPVMTRREAALILGVRESTPTEKVKEAHR 74 (112)
Q Consensus 3 ~~~~~~l~~~~~~~~~r~~~~A~~~~~~~~~~~~~~~-~-------~~~~~~~~m~~~ea~~iLgl~~~~~~~eik~~yr 74 (112)
+|.+++|+|+++.+++|+|.+||||..++....+..+ . ........||.+||.+|||+++..+.++|.++|.
T Consensus 2 ~R~~aqiIi~G~qvvgrAf~~A~RQeia~s~~aa~~~~a~k~g~~~~~~~~~~~iTlqEa~qILnV~~~ln~eei~k~ye 81 (132)
T KOG3442|consen 2 ARYLAQIIIMGSQVVGRAFVQAYRQEIAASQQAAARQAAGKSGTRSAEANSNGKITLQEAQQILNVKEPLNREEIEKRYE 81 (132)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccccccccccccHHHHhhHhCCCCCCCHHHHHHHHH
Confidence 6899999999999999999999999987653332111 1 1112235699999999999999999999999999
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHhccccc
Q 033745 75 RVMVANHPDAGGSHYLASKINEAKDIMLRRTK 106 (112)
Q Consensus 75 ~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~k 106 (112)
+|+..|.|.+|||+|+++||.+|+|.|..+.+
T Consensus 82 hLFevNdkskGGSFYLQSKVfRAkErld~El~ 113 (132)
T KOG3442|consen 82 HLFEVNDKSKGGSFYLQSKVFRAKERLDEELK 113 (132)
T ss_pred HHHhccCcccCcceeehHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.70 E-value=1.4e-17 Score=132.00 Aligned_cols=60 Identities=30% Similarity=0.432 Sum_probs=55.2
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|...+.|+||||+.++|.+|||++||+|+++||||+|. + .++|++|++|||+|++++||+
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa 64 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRA 64 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 44567899999999999999999999999999999987 4 489999999999999999986
>PHA03102 Small T antigen; Reviewed
Back Show alignment and domain information
Probab=99.66 E-value=2e-16 Score=112.50 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=56.8
Q ss_pred CHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCCC
Q 033745 50 TRREAALILGVREST--PTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSN 109 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~--~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~~ 109 (112)
..++++++|||++++ |.++||++||++++++|||+||+++++++||+||++|.++.+|..
T Consensus 3 e~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~ 64 (153)
T PHA03102 3 ESKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLR 64 (153)
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhcc
Confidence 468999999999999 999999999999999999999999999999999999999988764
>PTZ00037 DnaJ_C chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.64 E-value=3.3e-16 Score=126.35 Aligned_cols=64 Identities=20% Similarity=0.340 Sum_probs=59.3
Q ss_pred CCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCC
Q 033745 45 FQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 45 ~~~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
....|...++|++|||++++|.+|||++||+|++++|||++++.+.|++|++||++|.++.+|+
T Consensus 21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~ 84 (421)
T PTZ00037 21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRK 84 (421)
T ss_pred ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHH
Confidence 3455667899999999999999999999999999999999999999999999999999999884
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.61 E-value=6.3e-16 Score=120.71 Aligned_cols=60 Identities=23% Similarity=0.371 Sum_probs=54.9
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-H---HHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-H---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.++.|+||||+.+++..|||++||+|++++|||||.+ + +.|++||.||++|+++.+|.
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk 76 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRK 76 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 345788999999999999999999999999999999874 3 78999999999999999885
>smart00271 DnaJ DnaJ molecular chaperone homology domain
Back Show alignment and domain information
Probab=99.61 E-value=2.2e-15 Score=90.24 Aligned_cols=53 Identities=26% Similarity=0.395 Sum_probs=49.0
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CHHHHHHHHHHHHHhcccc
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-----SHYLASKINEAKDIMLRRT 105 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-----s~~~~~~i~~Ay~~L~~~~ 105 (112)
++|++|||+++++.++|+++|+++++.+|||+++ ..+.+.+|++||++|.++.
T Consensus 2 ~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999999999987 3588999999999999874
>cd06257 DnaJ DnaJ domain or J-domain
Back Show alignment and domain information
Probab=99.58 E-value=4.7e-15 Score=87.24 Aligned_cols=51 Identities=29% Similarity=0.414 Sum_probs=47.1
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcc
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLR 103 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~ 103 (112)
++|++|||+++++.++|+++|++|++++|||++++ .+.+.+|++||++|.+
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 37999999999999999999999999999999874 5889999999999974
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
>PRK14296 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.57 E-value=2.6e-15 Score=119.40 Aligned_cols=60 Identities=30% Similarity=0.520 Sum_probs=54.3
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|+..+.|++|||+++++.+|||++||+|++++|||++.+ .+.|++|++||++|.++.||+
T Consensus 1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~ 63 (372)
T PRK14296 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRK 63 (372)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhh
Confidence 445688999999999999999999999999999999753 478999999999999999884
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []
Back Show alignment and domain information
Probab=99.56 E-value=8.7e-15 Score=88.95 Aligned_cols=56 Identities=30% Similarity=0.439 Sum_probs=51.1
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC-CCH----HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAG-GSH----YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~-gs~----~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++|+||||+++++.++|+++|+++++.+|||++ ++. +.+..|++||++|.++.+|.
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~ 61 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRR 61 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHH
Confidence 579999999999999999999999999999994 455 78999999999999988764
Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
>PRK14288 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=1.2e-14 Score=115.43 Aligned_cols=57 Identities=25% Similarity=0.303 Sum_probs=52.1
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||++++|.+|||++||+|+++||||++. + .++|++|++||++|.++.+|+
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~ 63 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRA 63 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHH
Confidence 46799999999999999999999999999999976 3 378999999999999999874
>PRK14286 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=1.3e-14 Score=115.36 Aligned_cols=60 Identities=30% Similarity=0.389 Sum_probs=54.0
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|+..+.|++|||+++++.+|||++||+|++++|||++. + .++|++|++||++|.++.+|.
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~ 64 (372)
T PRK14286 1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQ 64 (372)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHH
Confidence 44468999999999999999999999999999999975 2 379999999999999998874
>PRK14279 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=1.8e-14 Score=115.27 Aligned_cols=58 Identities=26% Similarity=0.359 Sum_probs=53.4
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|+||||+++++.+|||++||+|++++|||+++ + .+.|++|++||++|.++.||+
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~ 69 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhh
Confidence 368899999999999999999999999999999976 3 388999999999999999884
>PRK14299 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=1.6e-14 Score=111.39 Aligned_cols=59 Identities=27% Similarity=0.399 Sum_probs=53.2
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr 107 (112)
|+..+.|+||||++++|.+|||++||+|++++|||++++ .+++++|++||++|.++.+|
T Consensus 1 m~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr 62 (291)
T PRK14299 1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKR 62 (291)
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHH
Confidence 444688999999999999999999999999999999864 37899999999999998776
>PRK14287 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.50 E-value=2e-14 Score=114.20 Aligned_cols=59 Identities=25% Similarity=0.385 Sum_probs=53.3
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...++|++|||+++++.+|||++||+|++++|||++.+ .+.|++|++||++|.++.+|+
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~ 63 (371)
T PRK14287 2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKA 63 (371)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHH
Confidence 34578999999999999999999999999999999864 368999999999999998874
>PRK14282 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.49 E-value=2.6e-14 Score=113.41 Aligned_cols=60 Identities=25% Similarity=0.356 Sum_probs=53.7
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|...+.|+||||+++++.+|||++||+|++++|||++.. .++|++|++||++|.++.+|+
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~ 65 (369)
T PRK14282 1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65 (369)
T ss_pred CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHH
Confidence 344578999999999999999999999999999999752 378999999999999999884
>PRK14276 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.48 E-value=3.5e-14 Score=113.15 Aligned_cols=59 Identities=22% Similarity=0.285 Sum_probs=53.6
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...+.|+||||+++++.+||+++||+|++++|||++.+ .+.|++|++||++|.++.+|+
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~ 63 (380)
T PRK14276 2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRA 63 (380)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhh
Confidence 34578999999999999999999999999999999764 478999999999999999874
>PRK14283 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=4.6e-14 Score=112.32 Aligned_cols=58 Identities=24% Similarity=0.366 Sum_probs=53.1
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g---s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|++|||+++++.+|||++||+|++++|||++. ..+.|++|++||++|.++.+|.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~ 64 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQ 64 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHH
Confidence 457899999999999999999999999999999975 3579999999999999998873
>PRK14280 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=4.6e-14 Score=112.31 Aligned_cols=60 Identities=27% Similarity=0.416 Sum_probs=53.8
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|...++|+||||+++++.+|||++||+|++++|||++.+ .+.|++|++||++|.++.+|+
T Consensus 1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~ 63 (376)
T PRK14280 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRA 63 (376)
T ss_pred CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHH
Confidence 334688999999999999999999999999999999753 489999999999999998874
>PRK14285 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=6.5e-14 Score=111.10 Aligned_cols=57 Identities=23% Similarity=0.457 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+|||++||+|++++|||++++ .++|++|++||++|.++.+|.
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~ 63 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhH
Confidence 478999999999999999999999999999999763 278999999999999998874
>PRK14298 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=5.8e-14 Score=111.83 Aligned_cols=58 Identities=26% Similarity=0.378 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|+||||+++++.+||+++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~ 64 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRA 64 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhh
Confidence 3589999999999999999999999999999999864 378999999999999998874
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.47 E-value=4.4e-14 Score=110.98 Aligned_cols=56 Identities=25% Similarity=0.350 Sum_probs=52.0
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..|.||||+++++.+|||++||+|.++||||||++. ++|++|.+|||+|+++.+|.
T Consensus 5 ~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~ 61 (337)
T KOG0712|consen 5 KLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKRE 61 (337)
T ss_pred ccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHH
Confidence 358999999999999999999999999999999865 99999999999999998873
>PRK10767 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=5.4e-14 Score=111.57 Aligned_cols=60 Identities=25% Similarity=0.423 Sum_probs=53.5
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-SH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|+..++|+||||+++++.+|||++||+|++++|||+++ +. +.|++|++||++|.++.+|.
T Consensus 1 ~~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 64 (371)
T PRK10767 1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64 (371)
T ss_pred CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhh
Confidence 34468999999999999999999999999999999975 32 68899999999999988874
>PRK14294 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.46 E-value=4.8e-14 Score=111.78 Aligned_cols=60 Identities=27% Similarity=0.416 Sum_probs=54.0
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|+..+.|+||||+++++.+||+++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~ 64 (366)
T PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRG 64 (366)
T ss_pred CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHH
Confidence 455689999999999999999999999999999999863 378999999999999998874
>PRK14301 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.46 E-value=6.6e-14 Score=111.36 Aligned_cols=59 Identities=22% Similarity=0.376 Sum_probs=53.3
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+..++|+||||+++++.++||++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 2 ~~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~ 64 (373)
T PRK14301 2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64 (373)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhh
Confidence 34678999999999999999999999999999999763 268999999999999999874
>PRK14297 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.46 E-value=8.1e-14 Score=111.00 Aligned_cols=58 Identities=22% Similarity=0.407 Sum_probs=53.0
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|++|||+++++.+||+++||+|++++|||++.+ .+.|++|++||++|.++.+|+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~ 64 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKA 64 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhC
Confidence 3578999999999999999999999999999999753 378999999999999999885
>PRK10266 curved DNA-binding protein CbpA; Provisional
Back Show alignment and domain information
Probab=99.45 E-value=8.1e-14 Score=108.16 Aligned_cols=60 Identities=22% Similarity=0.353 Sum_probs=53.7
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g---s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
|+..+.|++|||+++++.+|||++||+|++++|||++. ..+.|++|++||++|.++.+|+
T Consensus 1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~ 63 (306)
T PRK10266 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63 (306)
T ss_pred CCcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHH
Confidence 44467899999999999999999999999999999975 3578999999999999988773
>PRK14295 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.45 E-value=9.6e-14 Score=111.00 Aligned_cols=57 Identities=26% Similarity=0.388 Sum_probs=52.2
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+|||++||+|++++|||++. + .++|++|++||++|.++.+|+
T Consensus 9 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~ 69 (389)
T PRK14295 9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69 (389)
T ss_pred cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHH
Confidence 58899999999999999999999999999999975 2 378999999999999998774
>PRK14278 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.45 E-value=7.1e-14 Score=111.35 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=52.4
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+|||++||+|++++|||+++++ +.|++|++||++|.++.+|.
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~ 62 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR 62 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhh
Confidence 4689999999999999999999999999999998864 57999999999999998874
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.44 E-value=3.3e-13 Score=103.31 Aligned_cols=58 Identities=31% Similarity=0.426 Sum_probs=51.8
Q ss_pred CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-CH-------HHHHHHHHHHHHhccc
Q 033745 47 PVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG---G-SH-------YLASKINEAKDIMLRR 104 (112)
Q Consensus 47 ~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~---g-s~-------~~~~~i~~Ay~~L~~~ 104 (112)
..++.++||++||+++++|.++||++||+|+++||||+. | ++ +++++|++||++|++.
T Consensus 195 ~~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 195 RGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CCCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 468899999999999999999999999999999999993 2 22 6899999999999864
>PRK14281 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.44 E-value=1.6e-13 Score=109.97 Aligned_cols=57 Identities=26% Similarity=0.417 Sum_probs=52.2
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+|||++||+|++++|||++++ .+.|++|++||++|.++.+|+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~ 63 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRR 63 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhh
Confidence 478999999999999999999999999999999863 378999999999999988764
>PHA02624 large T antigen; Provisional
Back Show alignment and domain information
Probab=99.44 E-value=2.5e-13 Score=113.59 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=56.8
Q ss_pred HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCCCC
Q 033745 51 RREAALILGVREST--PTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNS 110 (112)
Q Consensus 51 ~~ea~~iLgl~~~~--~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~~~ 110 (112)
.+++|++|||++++ +.++||++||++++++|||+||+++.+++||+||++|.++.++...
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhc
Confidence 57899999999999 9999999999999999999999999999999999999998887664
>PRK14277 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.42 E-value=1.4e-13 Score=109.83 Aligned_cols=57 Identities=32% Similarity=0.413 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+||+++||+|++++|||+++ + .+.|++|++||++|.++.+|.
T Consensus 5 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~ 65 (386)
T PRK14277 5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 65 (386)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHH
Confidence 57899999999999999999999999999999975 2 368999999999999998774
>PRK14291 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.41 E-value=2.9e-13 Score=107.94 Aligned_cols=57 Identities=30% Similarity=0.384 Sum_probs=52.3
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|++|||+++++.++||++||+|++++|||++++ .++|++|++||++|.++.+|.
T Consensus 3 ~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~ 62 (382)
T PRK14291 3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRK 62 (382)
T ss_pred CCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHH
Confidence 468999999999999999999999999999999864 478999999999999998874
>PRK14300 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.41 E-value=2.6e-13 Score=107.89 Aligned_cols=57 Identities=25% Similarity=0.347 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||++++|.+||+++||+|++++|||++.+ .+.+++|++||++|.++.+|+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~ 62 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRA 62 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhh
Confidence 478999999999999999999999999999999753 478999999999999988774
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.39 E-value=4.7e-13 Score=99.50 Aligned_cols=59 Identities=22% Similarity=0.361 Sum_probs=53.3
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCC----CCCHHHHHHHHHHHHHhcccccC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDA----GGSHYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk----~gs~~~~~~i~~Ay~~L~~~~kr 107 (112)
+..-++++||||+++++..|||++||+|..++|||| +++.+.+..|+.||+.|.+...|
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sr 158 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSR 158 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhH
Confidence 344567999999999999999999999999999999 56788999999999999998766
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.38 E-value=7.3e-13 Score=107.16 Aligned_cols=59 Identities=19% Similarity=0.313 Sum_probs=54.4
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-----~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.....|++|||+.+++..+|+..||+|++++|||++++- ++|+.|+.||++|.+++.|+
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~ 69 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERA 69 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhh
Confidence 457899999999999999999999999999999998753 78999999999999998875
>PRK14284 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=4.9e-13 Score=106.92 Aligned_cols=56 Identities=27% Similarity=0.414 Sum_probs=51.1
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|+||||+++++.+|||++||+|++++|||++.+ .++|++|++||++|.++.+|.
T Consensus 2 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~ 61 (391)
T PRK14284 2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE 61 (391)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHH
Confidence 57999999999999999999999999999999763 378999999999999988763
>PRK14292 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=7.8e-13 Score=104.97 Aligned_cols=56 Identities=25% Similarity=0.383 Sum_probs=51.8
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|+||||+++++.++|+++|++|++++|||++++ .+++++|++||++|.++.+|+
T Consensus 3 d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~ 61 (371)
T PRK14292 3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRA 61 (371)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhh
Confidence 57999999999999999999999999999999875 478999999999999998874
>TIGR02349 DnaJ_bact chaperone protein DnaJ
Back Show alignment and domain information
Probab=99.38 E-value=6e-13 Score=104.93 Aligned_cols=55 Identities=29% Similarity=0.383 Sum_probs=50.8
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 54 AALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 54 a~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.|++|||+++++.+|||++|++|++++|||++.+ .+.|++|++||++|.++.+|.
T Consensus 2 ~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~ 59 (354)
T TIGR02349 2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRA 59 (354)
T ss_pred hHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHH
Confidence 6999999999999999999999999999999853 478999999999999998774
This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
>PRK14289 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.37 E-value=5.6e-13 Score=106.34 Aligned_cols=59 Identities=25% Similarity=0.383 Sum_probs=53.3
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...++|++|||+++++.+||+++||+|++++|||++. + .+.|++|++||++|.++.+|+
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 65 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRS 65 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHH
Confidence 3468999999999999999999999999999999975 3 378999999999999998875
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.37 E-value=1.6e-12 Score=99.20 Aligned_cols=59 Identities=27% Similarity=0.405 Sum_probs=54.1
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...+-|.+|||+.+++.++||++||+|++++|||++|+ +.+|..||.||++|.++.+|.
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~ 91 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRN 91 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhh
Confidence 35778999999999999999999999999999999875 389999999999999999884
>PRK14290 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.36 E-value=8.7e-13 Score=104.60 Aligned_cols=57 Identities=26% Similarity=0.344 Sum_probs=51.7
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+||+++||+|++++|||++++ .++|++|++||++|.++.+|.
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 64 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR 64 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhh
Confidence 467999999999999999999999999999999753 278999999999999998874
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.35 E-value=1e-12 Score=101.62 Aligned_cols=62 Identities=23% Similarity=0.376 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 47 PVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 47 ~~m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++.+++|+|||++.+++..|||.+|++|.+++|||.+.+ ..+|++|.+|||+|.++.+|.
T Consensus 38 ~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~ 102 (288)
T KOG0715|consen 38 RIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQ 102 (288)
T ss_pred ccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHH
Confidence 44555589999999999999999999999999999998653 488999999999999998874
>PRK14293 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.33 E-value=1.5e-12 Score=103.53 Aligned_cols=57 Identities=25% Similarity=0.329 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|+||||+++++.+||+++||+|++++|||++.+ .+.|+.|++||++|.++.+|+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~ 62 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRA 62 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHH
Confidence 367999999999999999999999999999999753 488999999999999998874
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.28 E-value=6.5e-12 Score=101.98 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=54.1
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
...|.|.+|||+++++.+||+++||++.+.+||||.-|+ +.|++|.+|||+|.|+++|+
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRa 72 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRA 72 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 446899999999999999999999999999999997654 68999999999999999985
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.27 E-value=5.7e-12 Score=97.79 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=53.0
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-SH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..|.|.|||++++++..+|+++|+...+++|||||+ +| +.|+.+.+||++|.++..|+
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~ 65 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRA 65 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHH
Confidence 468999999999999999999999999999999986 44 78999999999999988774
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.22 E-value=2.1e-11 Score=86.83 Aligned_cols=58 Identities=28% Similarity=0.346 Sum_probs=52.7
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH----HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG-SH----YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g-s~----~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|+||||.++++.+||+++||++.+++|||+++ ++ +.++.|++||++|.++.+|.
T Consensus 5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~ 67 (237)
T COG2214 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRA 67 (237)
T ss_pred hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHH
Confidence 467899999999999999999999999999999976 33 88999999999999988774
>PRK05014 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=99.19 E-value=3.3e-11 Score=86.98 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=48.5
Q ss_pred HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--CH-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRES--TPTEKVKEAHRRVMVANHPDAGG--SH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~g--s~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|++|||++. ++..+|+++|++|.+++|||+.. ++ +.++.||+||++|.++.+|+
T Consensus 2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra 68 (171)
T PRK05014 2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRA 68 (171)
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHH
Confidence 46899999996 78899999999999999999943 22 35678999999999999886
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Back Show alignment and domain information
Probab=99.19 E-value=2e-11 Score=106.01 Aligned_cols=60 Identities=22% Similarity=0.139 Sum_probs=54.2
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+...+.|+||||+++++..+||++||+|++++|||++++ ...|++|++||++|.++.+|.
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk 632 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKK 632 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHH
Confidence 344688999999999999999999999999999999763 378999999999999999885
>PRK01356 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=99.18 E-value=3.3e-11 Score=86.67 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=48.9
Q ss_pred HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRES--TPTEKVKEAHRRVMVANHPDAGGSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|++|||++. ++..+|+++|++|.+++|||+..+. +.+..||+||++|.++.+|+
T Consensus 3 ~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra 67 (166)
T PRK01356 3 NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRA 67 (166)
T ss_pred CHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 46899999997 7899999999999999999996543 23579999999999998875
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ
Back Show alignment and domain information
Probab=99.17 E-value=3.3e-11 Score=102.69 Aligned_cols=57 Identities=26% Similarity=0.462 Sum_probs=51.8
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.++|+||||+++++.++||++||+|++++|||++++. .+|++|++||++|.++.+|+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa 61 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRA 61 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHH
Confidence 3679999999999999999999999999999998653 57899999999999988875
This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
>PRK00294 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=99.16 E-value=4.7e-11 Score=86.43 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=50.1
Q ss_pred HHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--CH-------HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRES--TPTEKVKEAHRRVMVANHPDAGG--SH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~g--s~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
....+++|||++. ++..+|+++|++|.+++|||+.. +. ..+..||+||++|+++.+|+
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra 71 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRA 71 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhH
Confidence 3567999999998 78999999999999999999953 21 45788999999999999886
>PRK03578 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=99.12 E-value=8.9e-11 Score=85.18 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=49.3
Q ss_pred HHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--CH-------HHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRES--TPTEKVKEAHRRVMVANHPDAGG--SH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~g--s~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.|++|||++. ++..+|+++|++|.+++|||+.. +. +.++.||.||++|.++.+|+
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra 73 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRA 73 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHH
Confidence 578999999996 78999999999999999999953 22 23578999999999999886
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.06 E-value=1.6e-10 Score=87.11 Aligned_cols=56 Identities=18% Similarity=0.323 Sum_probs=51.7
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGG------SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g------s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|++|||..+++..+|+++|++|.+++|||++. ..+.|+.|+.||++|.++.+|+
T Consensus 15 d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~ 76 (264)
T KOG0719|consen 15 DLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRA 76 (264)
T ss_pred CHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 7899999999999999999999999999999974 3478999999999999988874
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.04 E-value=1.2e-09 Score=95.91 Aligned_cols=73 Identities=16% Similarity=0.259 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhCCCchhhhhhhhCCCCCCCCHHHHHHHhCCCCC----CCHHHHHHHHHHHHHHhCCCCCCC-HHHHH
Q 033745 18 GKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES----TPTEKVKEAHRRVMVANHPDAGGS-HYLAS 92 (112)
Q Consensus 18 ~r~~~~A~~~~~~~~~~~~~~~~~~~~~~~~m~~~ea~~iLgl~~~----~~~~eik~~yr~l~~~~HPDk~gs-~~~~~ 92 (112)
.|..+.+|+...... ...|+.++||+||+++-+ .++++||+.|++|..+||||||+. -++|.
T Consensus 1260 L~~~L~~W~~ElekK-------------P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe 1326 (2235)
T KOG1789|consen 1260 LRCCLATWYNELEKK-------------PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFE 1326 (2235)
T ss_pred HHHHHHHHHHHHhcC-------------CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHH
Confidence 355566666655433 345899999999999865 466899999999999999999985 58999
Q ss_pred HHHHHHHHhcc
Q 033745 93 KINEAKDIMLR 103 (112)
Q Consensus 93 ~i~~Ay~~L~~ 103 (112)
++|.|||+|+.
T Consensus 1327 ~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1327 RVNKAYELLSS 1337 (2235)
T ss_pred HHHHHHHHHHH
Confidence 99999999983
>PRK01773 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.93 E-value=1.7e-09 Score=78.34 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=48.9
Q ss_pred HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCC--CCH-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRES--TPTEKVKEAHRRVMVANHPDAG--GSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~--gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.+++|||++. ++...++++|+.|.+.+|||+- .++ +....||+||.+|+++.+|+
T Consensus 3 nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA 69 (173)
T PRK01773 3 NPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRA 69 (173)
T ss_pred ChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHH
Confidence 46899999997 8999999999999999999993 232 45688999999999999886
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.92 E-value=9e-10 Score=89.35 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=53.2
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+||.+|||+++++.++||+.||+++...|||||-.+ |.|+++..|||+|.+..+|.
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~ 294 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRK 294 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhh
Confidence 34699999999999999999999999999999998654 88999999999999998875
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.90 E-value=9.9e-10 Score=84.00 Aligned_cols=58 Identities=22% Similarity=0.318 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.++.|++||+..+++..||.++||+|.+++|||++.+ ..+|.+|..||++|.++..|.
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt 92 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRT 92 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHH
Confidence 4889999999999999999999999999999999754 368999999999999887654
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Back Show alignment and domain information
Probab=98.74 E-value=1.2e-08 Score=81.42 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=52.8
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..++.|+|||+..++++.||.++||+|..++|||.--+. .+|..|..|+|+|.++.+|+
T Consensus 392 ~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRr 457 (504)
T KOG0624|consen 392 GKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRR 457 (504)
T ss_pred ccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHh
Confidence 457899999999999999999999999999999985554 36777999999999999886
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB
Back Show alignment and domain information
Probab=98.71 E-value=2.1e-08 Score=71.44 Aligned_cols=45 Identities=18% Similarity=0.159 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCC--CC-------HHHHHHHHHHHHHhcccccCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDAG--GS-------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk~--gs-------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
++..+|+++|++|.+++|||+. .+ ...++.||+||++|.++.+|+
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra 56 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRA 56 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhH
Confidence 5789999999999999999983 22 256789999999999999886
This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.65 E-value=2.5e-08 Score=80.60 Aligned_cols=59 Identities=27% Similarity=0.449 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC-CC----HHHHHHHHHHHHHhcccccCCC
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAG-GS----HYLASKINEAKDIMLRRTKGSN 109 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~-gs----~~~~~~i~~Ay~~L~~~~kr~~ 109 (112)
..++|+|||+..+++..||+++||++.+.||||++ |+ ..+|.++-+||.+|.++.+|.+
T Consensus 372 Rkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r 435 (486)
T KOG0550|consen 372 RKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVR 435 (486)
T ss_pred hhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhh
Confidence 46899999999999999999999999999999996 44 2579999999999999988764
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.63 E-value=3e-08 Score=73.62 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=47.2
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-H----HHHHHHHHHHHhcccc
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-Y----LASKINEAKDIMLRRT 105 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-~----~~~~i~~Ay~~L~~~~ 105 (112)
-.+|++|.|+|.++.++|+++||+|....|||+|.+. + .|--|..||..|.++.
T Consensus 53 LNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~ 111 (250)
T KOG1150|consen 53 LNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDK 111 (250)
T ss_pred cChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHH
Confidence 3579999999999999999999999999999999865 3 3555889999998876
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.62 E-value=2.8e-08 Score=73.93 Aligned_cols=57 Identities=28% Similarity=0.397 Sum_probs=50.0
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~-----~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.++|+|||+...++.++|+++|+++++++|||++.+. ..+.+|.+||++|.++.+|.
T Consensus 3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~ 64 (306)
T KOG0714|consen 3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRK 64 (306)
T ss_pred ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhh
Confidence 4689999999988888999999999999999997654 34778889999999988875
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Back Show alignment and domain information
Probab=98.55 E-value=5e-08 Score=79.65 Aligned_cols=55 Identities=20% Similarity=0.322 Sum_probs=48.4
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHHhcccccC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---------HYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs---------~~~~~~i~~Ay~~L~~~~kr 107 (112)
++|+|||++.+.+..+||++||+|..++||||-.. .+....|+.||+.|.+...|
T Consensus 99 DPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~r 162 (610)
T COG5407 99 DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRR 162 (610)
T ss_pred ChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 35999999999999999999999999999999543 26678899999999987665
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.43 E-value=6.4e-07 Score=68.14 Aligned_cols=52 Identities=31% Similarity=0.409 Sum_probs=47.4
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHH-Hhc
Q 033745 51 RREAALILGVRESTPTEKVKEAHRRVMVANHPDAGG---SHYLASKINEAKD-IML 102 (112)
Q Consensus 51 ~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~g---s~~~~~~i~~Ay~-~L~ 102 (112)
..|.+.|||++++++.++++.+|-+|++++|||.|. |.+.|.+|.+||. +|.
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999975 6789999999998 443
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.65 E-value=8.6e-05 Score=57.76 Aligned_cols=57 Identities=21% Similarity=0.373 Sum_probs=49.3
Q ss_pred HHHHHHhCCCCC---CCHHHHHHHHHHHHHHhCCCC---CC---CHHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRES---TPTEKVKEAHRRVMVANHPDA---GG---SHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~---~~~~eik~~yr~l~~~~HPDk---~g---s~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+-|.+|||+.- ++++.|.+++++.+.+||||+ || ..+.|.-|..||++|.++.+|.
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~ 108 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRL 108 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHh
Confidence 567999999974 788899999999999999998 34 4688899999999999987764
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.65 E-value=6e-05 Score=54.33 Aligned_cols=50 Identities=28% Similarity=0.441 Sum_probs=42.9
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCC---CCCH--------HHHHHHHHHHHHh
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDA---GGSH--------YLASKINEAKDIM 101 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk---~gs~--------~~~~~i~~Ay~~L 101 (112)
.+++.+||++...+..+|+++|++++..+|||+ .|.+ +.+++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999998 3433 5567788888754
>PF13446 RPT: A repeated domain in UCH-protein
Back Show alignment and domain information
Probab=97.13 E-value=0.0032 Score=37.84 Aligned_cols=47 Identities=26% Similarity=0.334 Sum_probs=37.3
Q ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhc
Q 033745 49 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIML 102 (112)
Q Consensus 49 m~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~ 102 (112)
|+.++||++||++++.+.+.|-..|+..+. ..| .......+|-.+|-
T Consensus 2 ~~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P------~~~~~~r~AL~~Ia 48 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDTDDDFIISAFQSKVN-DDP------SQKDTLREALRVIA 48 (62)
T ss_pred CCHHHHHHHhCcCCCCCHHHHHHHHHHHHH-cCh------HhHHHHHHHHHHHH
Confidence 889999999999999999999999999988 223 34455566665554
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.10 E-value=0.00089 Score=48.01 Aligned_cols=59 Identities=22% Similarity=0.257 Sum_probs=48.9
Q ss_pred CHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC-------C--HHHHHHHHHHHHHhcccccCC
Q 033745 50 TRREAALILGVRES--TPTEKVKEAHRRVMVANHPDAGG-------S--HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 50 ~~~ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~g-------s--~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+....+.+||.+.. .+++.+...|-...++.|||+-+ + .+...++|+||..|.++.+|+
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA 75 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARA 75 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence 34678999988865 78888888999999999999832 2 256788999999999999886
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Back Show alignment and domain information
Probab=96.48 E-value=0.0034 Score=51.64 Aligned_cols=37 Identities=32% Similarity=0.477 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCC-CC---CH---HHHHHHHHHHH
Q 033745 63 STPTEKVKEAHRRVMVANHPDA-GG---SH---YLASKINEAKD 99 (112)
Q Consensus 63 ~~~~~eik~~yr~l~~~~HPDk-~g---s~---~~~~~i~~Ay~ 99 (112)
-++.+.||++|||-++..|||| .+ +. |++.+|+.++.
T Consensus 399 LVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~ 442 (453)
T KOG0431|consen 399 LVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALS 442 (453)
T ss_pred ccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHH
Confidence 3799999999999999999999 23 22 55666655544
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised
Back Show alignment and domain information
Probab=96.02 E-value=0.019 Score=42.38 Aligned_cols=39 Identities=23% Similarity=0.344 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcc
Q 033745 61 RESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLR 103 (112)
Q Consensus 61 ~~~~~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~ 103 (112)
+++++.|||+++++++..+| +||.....+|..|||.|.-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y----~gd~~~~~~IEaAYD~ILM 39 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQY----AGDEKSREAIEAAYDAILM 39 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHH
Confidence 46789999999999999999 7899999999999998764
This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=94.87 E-value=0.017 Score=41.56 Aligned_cols=45 Identities=20% Similarity=0.195 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCH---------HHHHHHHHHHHHhcccccCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDAGGSH---------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk~gs~---------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.+.+.++..|+.+...+|||+.++. ..+..+|.||..|+++..|+
T Consensus 15 ~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra 68 (174)
T COG1076 15 IDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRA 68 (174)
T ss_pred HHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 3567789999999999999996532 35677999999999987764
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Back Show alignment and domain information
Probab=82.85 E-value=1.9 Score=29.13 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCC
Q 033745 64 TPTEKVKEAHRRVMVANHPDAGG 86 (112)
Q Consensus 64 ~~~~eik~~yr~l~~~~HPDk~g 86 (112)
.+..+++.+-|...++.|||-=+
T Consensus 6 ~~~~~l~~aLr~Fy~~VHPDlF~ 28 (112)
T PF14687_consen 6 LSSPDLRSALRPFYFAVHPDLFG 28 (112)
T ss_pred hhhHHHHHHHHHHHHHhCCcccc
Confidence 56788999999999999999744
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 112
d1fafa_ 79
Large T antigen, the N-terminal J domain {Murine p
99.77 d1gh6a_ 114
Large T antigen, the N-terminal J domain {Simian v
99.71 d1xbla_ 75
DnaJ chaperone, N-terminal (J) domain {Escherichia
99.61 d1iura_ 88
Hypothetical protein KIAA0730 {Human (Homo sapiens
99.55 d1wjza_ 94
CSL-type zinc finger-containing protein 3 (J-domai
99.54 d1hdja_ 77
HSP40 {Human (Homo sapiens) [TaxId: 9606]}
99.52 d1fpoa1 76
HSC20 (HSCB), N-terminal (J) domain {Escherichia c
99.44 d1nz6a_ 98
Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
99.41
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Back Hide information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]
Probab=99.77 E-value=1e-19 Score=114.14 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=54.9
Q ss_pred HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCCC
Q 033745 51 RREAALILGVREST--PTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSN 109 (112)
Q Consensus 51 ~~ea~~iLgl~~~~--~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~~ 109 (112)
.+++|+||||++++ +.++|+++|+++++++|||+||+++.|++||+||++|.++.+|..
T Consensus 10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~d~~~r~~ 70 (79)
T d1fafa_ 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHCCHHHHHH
Confidence 47899999999986 999999999999999999999999999999999999999887644
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]
Probab=99.71 E-value=1.1e-18 Score=115.68 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=54.1
Q ss_pred HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccCC
Q 033745 51 RREAALILGVREST--PTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 51 ~~ea~~iLgl~~~~--~~~eik~~yr~l~~~~HPDk~gs~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
..+.|+||||+.++ +.++||++|++|++++|||+||+.+.|++|++||++|.++.+|+
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~e~F~~I~~AY~vLsd~~kR~ 66 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYA 66 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhCCHHHHH
Confidence 35789999999997 78899999999999999999999999999999999999988875
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=1.3e-16 Score=98.47 Aligned_cols=56 Identities=23% Similarity=0.385 Sum_probs=50.4
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|+||||++++|.++|+++|++|++++|||++++ .+.|.+|++||++|.++.+|.
T Consensus 4 dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~ 63 (75)
T d1xbla_ 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63 (75)
T ss_dssp CTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHH
T ss_pred CHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHH
Confidence 56899999999999999999999999999999753 367999999999999988763
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.5e-15 Score=95.52 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=51.2
Q ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhcccccC
Q 033745 50 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDIMLRRTKG 107 (112)
Q Consensus 50 ~~~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-----~~~~~~i~~Ay~~L~~~~kr 107 (112)
..+|+|+|||+++++|.+|||++|++|++++|||++++ .+.|++|++||++|.+...+
T Consensus 14 ~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~~~~~ 76 (88)
T d1iura_ 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999764 25799999999999865433
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.54 E-value=1.3e-15 Score=97.74 Aligned_cols=57 Identities=19% Similarity=0.265 Sum_probs=50.5
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHhcccccCC
Q 033745 52 REAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS----------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 52 ~ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs----------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.++|+||||+++++.++|+++|++|++++|||++.. .+.|..|++||++|.++.+|.
T Consensus 16 ~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~ 82 (94)
T d1wjza_ 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK 82 (94)
T ss_dssp SCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred cChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 479999999999999999999999999999999642 156889999999999988763
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=6.2e-15 Score=91.12 Aligned_cols=56 Identities=27% Similarity=0.335 Sum_probs=50.9
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs~---~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|+||||++++|.++|+++|+++.+++|||++.++ +.+..|++||++|.++.+|.
T Consensus 4 dyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~ 62 (77)
T d1hdja_ 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp CSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHH
Confidence 479999999999999999999999999999997643 78999999999999988763
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=4.4e-14 Score=86.88 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=47.8
Q ss_pred HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCC--CCH-------HHHHHHHHHHHHhcccccCC
Q 033745 53 EAALILGVRES--TPTEKVKEAHRRVMVANHPDAG--GSH-------YLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 53 ea~~iLgl~~~--~~~~eik~~yr~l~~~~HPDk~--gs~-------~~~~~i~~Ay~~L~~~~kr~ 108 (112)
+.|++|||+.+ ++.++|+++|+++++++|||+. .+. ..++.|++||++|.++.+|+
T Consensus 2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~ 68 (76)
T d1fpoa1 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (76)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 57999999986 5689999999999999999983 222 45678999999999998874
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.41 E-value=1.3e-14 Score=93.66 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=49.6
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhcccccCC
Q 033745 54 AALILGVRESTPTEKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDIMLRRTKGS 108 (112)
Q Consensus 54 a~~iLgl~~~~~~~eik~~yr~l~~~~HPDk~gs-------~~~~~~i~~Ay~~L~~~~kr~ 108 (112)
.|++||+++.++.++||++|+++++.+|||++++ ...|+.|++||++|.++.+|+
T Consensus 35 ~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~ 96 (98)
T d1nz6a_ 35 KWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP 96 (98)
T ss_dssp SCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHh
Confidence 4889999999999999999999999999998543 257899999999999999986
