Citrus Sinensis ID: 033829

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRGCPVFAVNKY
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHcccccccccccccccccccccEEEccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHHHHcccccccccHHcccccccccccEEEccccccccccccHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccEEEEEcc
Coil and Loop (DISEMBL)
mtgkakpkkhTAKEIAMKVDaattnrgggkagmadrtgrekgghakyecplckvtapdiksmqihhdarhpklpfdeasLVNLHAArvdaesskpkpgirgcpvfavnky
Flexible Loop (DISEMBL)
mtgkakpkkhtakeiamkvdaattnrgggkagmadrtgrekgghakyECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAArvdaesskpkpgirgcpvfavnky
Low Complexity Region (SEG)
MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRGCPVFAVNKY
Disordered region (IsUnstruct)
*********************************************KYECPLCKVTAPDIKSM*I**********************************************
Disordered Region (DISOPRED)
***************************************EKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLV********************CPVFAVNK*
Disordered Region (DISEMBL)
************KEIAMKVDAATT********************AKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAAR*********PGIRGCPVFAVNKY
Disordered Region (DISPRO)
*****************************************GGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAARV******PKPGIRGCPVFAVNKY
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRGCPVFAVNKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
356531898	105	PREDICTED: uncharacterized protein LOC10	0.918	0.961	0.831	9e-42
449442671	105	PREDICTED: uncharacterized protein LOC10	0.918	0.961	0.772	2e-41
224144937	114	predicted protein [Populus trichocarpa]	0.909	0.877	0.821	3e-41
118485826	104	unknown [Populus trichocarpa] gi|1184876	0.909	0.961	0.821	6e-41
359476770	104	PREDICTED: uncharacterized protein LOC10	0.909	0.961	0.821	6e-41
225430983	112	PREDICTED: uncharacterized protein LOC10	0.909	0.892	0.821	7e-41
359476772	118	PREDICTED: uncharacterized protein LOC10	0.909	0.847	0.821	8e-41
76573353	105	unknown [Solanum tuberosum] gi|78191418|	0.918	0.961	0.821	1e-40
356568491	104	PREDICTED: uncharacterized protein LOC10	0.909	0.961	0.821	1e-40
359476774	127	PREDICTED: uncharacterized protein LOC10	0.890	0.771	0.828	2e-39

>gi|356531898|ref|XP_003534513.1| PREDICTED: uncharacterized protein LOC100784149 [Glycine max]

 Score =  173 bits (439), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 84/101 (83%), Positives = 90/101 (89%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAGM DRTG EKGGHAKYECP CKVTAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGMKDRTGLEKGGHAKYECPHCKVTAPDVK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHHDARHPK+PF+E  +VNLHA     ESSKP+PG+RG
Sbjct: 61  SMQIHHDARHPKIPFEEDKVVNLHATTSVPESSKPRPGVRG 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442671|ref|XP_004139104.1| PREDICTED: uncharacterized protein LOC101210666 [Cucumis sativus] gi|449485348|ref|XP_004157141.1| PREDICTED: uncharacterized protein LOC101231373 [Cucumis sativus]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 93/101 (92%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA K+DAATTNRGGGKAG+ADR+G EKGGHAK+ECP CK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPYCKITAPDVK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHH+++HPK+PF+E  ++NLHA RV AE+SK KPG+RG
Sbjct: 61  SMQIHHESKHPKVPFEEEKVINLHAVRVAAEASKTKPGVRG 101

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144937|ref|XP_002325468.1| predicted protein [Populus trichocarpa] gi|222862343|gb|EEE99849.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 92/101 (91%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADRTG+EKGGHAKYECP CK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           +MQIHHDARHPKLPF+E  L NLHA  V A+SSKP+PG++G
Sbjct: 61  TMQIHHDARHPKLPFEEDKLSNLHAVHV-ADSSKPRPGVKG 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485826|gb|ABK94760.1| unknown [Populus trichocarpa] gi|118487675|gb|ABK95662.1| unknown [Populus trichocarpa] gi|118489562|gb|ABK96583.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  171 bits (433), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 92/101 (91%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADRTG+EKGGHAKYECP CK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           +MQIHHDARHPKLPF+E  L NLHA  V A+SSKP+PG++G
Sbjct: 61  TMQIHHDARHPKLPFEEDKLSNLHAVHV-ADSSKPRPGVKG 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476770|ref|XP_003631885.1| PREDICTED: uncharacterized protein LOC100253066 isoform 2 [Vitis vinifera]

 Score =  171 bits (432), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 92/101 (91%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADR+G +KGGHAK ECPLCK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHH+ARHPK+PFDEA L NLHA+ V  ESSKP+PG+RG
Sbjct: 61  SMQIHHEARHPKVPFDEAKLSNLHASSV-PESSKPRPGVRG 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430983|ref|XP_002278674.1| PREDICTED: uncharacterized protein LOC100253066 isoform 1 [Vitis vinifera] gi|147788095|emb|CAN67065.1| hypothetical protein VITISV_036295 [Vitis vinifera] gi|297735278|emb|CBI17640.3| unnamed protein product [Vitis vinifera]

 Score =  171 bits (432), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 92/101 (91%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADR+G +KGGHAK ECPLCK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHH+ARHPK+PFDEA L NLHA+ V  ESSKP+PG+RG
Sbjct: 61  SMQIHHEARHPKVPFDEAKLSNLHASSV-PESSKPRPGVRG 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476772|ref|XP_003631886.1| PREDICTED: uncharacterized protein LOC100253066 isoform 3 [Vitis vinifera]

 Score =  170 bits (431), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 92/101 (91%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADR+G +KGGHAK ECPLCK+TAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHH+ARHPK+PFDEA L NLHA+ V  ESSKP+PG+RG
Sbjct: 61  SMQIHHEARHPKVPFDEAKLSNLHASSV-PESSKPRPGVRG 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76573353|gb|ABA46781.1| unknown [Solanum tuberosum] gi|78191418|gb|ABB29930.1| unknown [Solanum tuberosum]

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 90/101 (89%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKE+A KVDAATTNRGGGKAG+ADR+G EKGGHAK ECPLCKVTAPDIK
Sbjct: 1   MTGKAKPKKHTAKELAAKVDAATTNRGGGKAGLADRSGIEKGGHAKLECPLCKVTAPDIK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SM+IHHDA+HPKL FDEA L NLH+  V   S+KPKPGIRG
Sbjct: 61  SMKIHHDAKHPKLAFDEAKLNNLHSTGVAESSTKPKPGIRG 101

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568491|ref|XP_003552444.1| PREDICTED: uncharacterized protein LOC100788257 [Glycine max]

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 91/101 (90%), Gaps = 1/101 (0%)

Query: 1   MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
           MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG+ DR+G EKGGHAKYECP CKVTAPD+K
Sbjct: 1   MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLKDRSGLEKGGHAKYECPHCKVTAPDVK 60

Query: 61  SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
           SMQIHHDARHPK+PF+E  +VNLHA  V  ESSKP+PG+RG
Sbjct: 61  SMQIHHDARHPKIPFEEDKVVNLHATHV-PESSKPRPGVRG 100

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476774|ref|XP_003631887.1| PREDICTED: uncharacterized protein LOC100253066 isoform 4 [Vitis vinifera]

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 90/99 (90%), Gaps = 1/99 (1%)

Query: 1  MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
          MTGKAKPKKHTAKEIA KVDAATTNRGGGKAG ADR+G +KGGHAK ECPLCK+TAPD+K
Sbjct: 1  MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLK 60

Query: 61 SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGI 99
          SMQIHH+ARHPK+PFDEA L NLHA+ V  ESSKP+PGI
Sbjct: 61 SMQIHHEARHPKVPFDEAKLSNLHASSV-PESSKPRPGI 98

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:2075397	105	AT3G02790 [Arabidopsis thalian	0.918	0.961	0.722	9.9e-39
TAIR|locus:2171422	104	AT5G16470 "AT5G16470" [Arabido	0.9	0.951	0.735	8.9e-38
UNIPROTKB|Q32P60	76	MGC133632 "Uncharacterized pro	0.409	0.592	0.326	0.00073
UNIPROTKB|E2RQA4	76	ZNF706 "Uncharacterized protei	0.409	0.592	0.326	0.00073
UNIPROTKB|Q9Y5V0	76	ZNF706 "Zinc finger protein 70	0.409	0.592	0.326	0.00073
UNIPROTKB|F2Z559	76	LOC100521722 "Uncharacterized	0.409	0.592	0.326	0.00073
MGI|MGI:1915286	76	Zfp706 "zinc finger protein 70	0.409	0.592	0.326	0.00073
ZFIN|ZDB-GENE-040808-48	76	zgc:91910 "zgc:91910" [Danio r	0.490	0.710	0.339	0.00073

TAIR|locus:2075397 AT3G02790 [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 73/101 (72%), Positives = 86/101 (85%)

Query:     1 MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
             MTGKAKPKKHTAKEI  K+DAA TNRGGGKAG+ADRTG+EKGGHAKYECP CK+TAP +K
Sbjct:     1 MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60

Query:    61 SMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRG 101
             +MQIHH+++HP + ++E+ LVNLHA       SKPKPGIRG
Sbjct:    61 TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRG 101

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2171422 AT5G16470 "AT5G16470" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 75/102 (73%), Positives = 86/102 (84%)

Query:     1 MTGKAKPKKHTAKEIAMKVDAATTNRGGGKAGMADRTGREKGGHAKYECPLCKVTAPDIK 60
             MTGKAKPKKHTAKE+  K DAA TNRGGGKAG+ADRTG+EKGGHAKYECP CK+T PD+K
Sbjct:     1 MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK 60

Query:    61 SMQIHHDARHPKLPFDEASLVNLHAA-RVDAESSKPKPGIRG 101
             +MQIHH+++HPKL ++E    NLH A    AESSKPKPGIRG
Sbjct:    61 TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRG 100

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0007067 "mitosis" evidence=RCA

UNIPROTKB|Q32P60 MGC133632 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query:    30 KAGMADRTGREKGGHAK----YECPLCKVTAPDIKSMQIHHDARHPKLP 74
             +AG   + G ++   AK    Y C +C+   PD K+ + H +++HPK P
Sbjct:    18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RQA4 ZNF706 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query:    30 KAGMADRTGREKGGHAK----YECPLCKVTAPDIKSMQIHHDARHPKLP 74
             +AG   + G ++   AK    Y C +C+   PD K+ + H +++HPK P
Sbjct:    18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q9Y5V0 ZNF706 "Zinc finger protein 706" [Homo sapiens (taxid:9606)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query:    30 KAGMADRTGREKGGHAK----YECPLCKVTAPDIKSMQIHHDARHPKLP 74
             +AG   + G ++   AK    Y C +C+   PD K+ + H +++HPK P
Sbjct:    18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F2Z559 LOC100521722 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query:    30 KAGMADRTGREKGGHAK----YECPLCKVTAPDIKSMQIHHDARHPKLP 74
             +AG   + G ++   AK    Y C +C+   PD K+ + H +++HPK P
Sbjct:    18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1915286 Zfp706 "zinc finger protein 706" [Mus musculus (taxid:10090)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query:    30 KAGMADRTGREKGGHAK----YECPLCKVTAPDIKSMQIHHDARHPKLP 74
             +AG   + G ++   AK    Y C +C+   PD K+ + H +++HPK P
Sbjct:    18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-040808-48 zgc:91910 "zgc:91910" [Danio rerio (taxid:7955)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query:    30 KAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHA 85
             KA  AD+    K     + CP+C+   PD K+ + H +++HPK P   A L ++ A
Sbjct:    23 KAQGADQKTAAKAALV-HTCPVCRTQMPDPKTFKQHFESKHPKSPMP-AELADVQA 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110       110   0.00091  102 3  11 23  0.49    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  110 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.90u 0.14s 13.04t   Elapsed:  00:00:00
  Total cpu time:  12.90u 0.14s 13.04t   Elapsed:  00:00:00
  Start:  Fri May 10 05:12:12 2013   End:  Fri May 10 05:12:12 2013

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0095002101 SubName- Full=Putative uncharacterized protein; (115 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
KOG4118	74	consensus Uncharacterized conserved protein [Funct	99.69
PF12907	40	zf-met2: Zinc-binding	98.99
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.13
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.15
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.0
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	94.43
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.21
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.0
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.08
smart00355	26	ZnF_C2H2 zinc finger.	91.46
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	90.83
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	89.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	86.09
PF04988	165	AKAP95: A-kinase anchoring protein 95 (AKAP95); In	86.05
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	84.03
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	82.8
KOG1842	505	consensus FYVE finger-containing protein [General	81.82
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	80.36

>KOG4118 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.69  E-value=2.3e-18  Score=118.26  Aligned_cols=46  Identities=30%  Similarity=0.606  Sum_probs=40.6

Q ss_pred             ccccccccceeeeeCcccccCCCCcchhhhhhhhCCCCCCCChHHHHH
Q 033829           35 DRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVN   82 (110)
Q Consensus        35 dR~g~~k~galk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~E~l~d   82 (110)
                      |.+-. ..++|.|+|.||++||||+++|++|||+||||+|||+| |.+
T Consensus        28 DQK~A-A~~aL~~kCtVC~~~mpdpktfkqhfe~kHpk~~~P~e-L~~   73 (74)
T KOG4118|consen   28 DQKAA-AMAALHHKCTVCMVQMPDPKTFKQHFENKHPKEPLPEE-LSE   73 (74)
T ss_pred             cHHHH-HHHHHHhhhHhhHhhCCCCchHHHHHhhcCCCCCCCHh-hcc
Confidence            55433 56789999999999999999999999999999999999 765

>PF12907 zf-met2: Zinc-binding

Probab=98.99  E-value=8.2e-11  Score=72.58  Aligned_cols=31  Identities=23%  Similarity=0.669  Sum_probs=28.1

Q ss_pred             eeeCcccc---cCCCCcchhhhhhhhCCCCCCCC
Q 033829           46 KYECPLCK---VTAPDIKSMQIHHDARHPKLPFD   76 (110)
Q Consensus        46 k~~C~VCk---aqmPD~Kt~k~HfESKHPK~plp   76 (110)
                      +++|+||+   .++++++.|++||||||||.++.
T Consensus         1 ~i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~   34 (40)
T PF12907_consen    1 NIICKICRQTFMQTTNEPQLKEHAENKHPKNTFE   34 (40)
T ss_pred             CcCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHH
Confidence            47899999   89999999999999999997553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.13  E-value=0.0001  Score=38.74  Aligned_cols=23  Identities=17%  Similarity=0.537  Sum_probs=21.7

Q ss_pred             eeCcccccCCCCcchhhhhhhhC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      |.|.+|..++.++.+|++|++++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999985

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.15  E-value=0.0017  Score=32.41  Aligned_cols=24  Identities=21%  Similarity=0.672  Sum_probs=20.4

Q ss_pred             eeCcccccCCCCcchhhhhhhhCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      |.|++|....++...|.+|....|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998766

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.00  E-value=0.0091  Score=39.48  Aligned_cols=29  Identities=28%  Similarity=0.621  Sum_probs=22.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      -.+||+|.+.++..+.|+.|.|..|-+-|
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            46899999999999999999999997654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.43  E-value=0.0092  Score=30.58  Aligned_cols=22  Identities=23%  Similarity=0.671  Sum_probs=20.7

Q ss_pred             eeCcccccCCCCcchhhhhhhh
Q 033829           47 YECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      |+|++|....++...|++|.+.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            7899999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.21  E-value=0.022  Score=30.82  Aligned_cols=24  Identities=13%  Similarity=0.420  Sum_probs=21.6

Q ss_pred             eeeCcccccCCCCcchhhhhhhhC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      .|.|.+|--.+.|...+.+|..||
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccC
Confidence            378999999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.00  E-value=0.06  Score=33.23  Aligned_cols=28  Identities=21%  Similarity=0.461  Sum_probs=25.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      .|.||.|.. --|...|..|.+..|+.++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~   29 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES   29 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC
Confidence            489999999 7899999999999999764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.08  E-value=0.07  Score=29.40  Aligned_cols=25  Identities=32%  Similarity=0.603  Sum_probs=22.7

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      .|.|.+|...+-|...+.+|+.++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk~   27 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGKK   27 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChHH
Confidence            4889999999999999999998864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00355 ZnF_C2H2 zinc finger

Probab=91.46  E-value=0.082  Score=26.04  Aligned_cols=24  Identities=25%  Similarity=0.595  Sum_probs=21.2

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      |.|+.|....++..++..|.. .|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhc
Confidence            689999999999999999988 553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=90.83  E-value=0.092  Score=27.71  Aligned_cols=26  Identities=19%  Similarity=0.496  Sum_probs=23.2

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      .|+|.+|....++...|..|-..-|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            38999999999999999999977665

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=89.32  E-value=0.093  Score=27.34  Aligned_cols=24  Identities=29%  Similarity=0.808  Sum_probs=19.2

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      |.|+.|-=... ...|..|.+..||
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999986666 8899999999887

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=86.09  E-value=0.34  Score=30.63  Aligned_cols=30  Identities=27%  Similarity=0.542  Sum_probs=24.1

Q ss_pred             eeeCcccccCCCCcchhhhhhhhC-CCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDAR-HPKLPF   75 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESK-HPK~pl   75 (110)
                      .+.|++|.....+...++.|..++ |.+...
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~~~   80 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHHKKRNS   80 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTTTC-S-
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccCCCccc
Confidence            699999999999999999999987 555444

>PF04988 AKAP95: A-kinase anchoring protein 95 (AKAP95); InterPro: IPR007071 A-kinase (or PKA)-anchoring protein AKAP95 is implicated in mitotic chromosome condensation by acting as a targeting molecule for the condensin complex

Probab=86.05  E-value=0.31  Score=38.18  Aligned_cols=26  Identities=23%  Similarity=0.621  Sum_probs=24.1

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      |+|++|+-+.=+.+-+..|+||+==+
T Consensus         1 F~Cs~CKfrtf~~~ei~~HleS~~H~   26 (165)
T PF04988_consen    1 FTCSFCKFRTFEEKEIEKHLESKFHK   26 (165)
T ss_pred             CccceeeeecccHHHHHHHHccchHH
Confidence            78999999999999999999998666

The protein contains two zinc fingers which are thought to mediate the binding of AKAP95 to DNA [].; GO: 0003677 DNA binding, 0005634 nucleus

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=84.03  E-value=0.57  Score=26.01  Aligned_cols=20  Identities=25%  Similarity=0.554  Sum_probs=16.0

Q ss_pred             eeCcccccCCCCcchhhhhhh
Q 033829           47 YECPLCKVTAPDIKSMQIHHD   67 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfE   67 (110)
                      +.||||-.++ ....+..|.+
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            5799999888 5577778876

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=82.80  E-value=0.54  Score=28.95  Aligned_cols=23  Identities=26%  Similarity=0.715  Sum_probs=19.4

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      .+.||||-....+  .|..|+...|
T Consensus        31 ~v~CPiC~~~~~~--~l~~Hl~~~H   53 (54)
T PF05605_consen   31 NVVCPICSSRVTD--NLIRHLNSQH   53 (54)
T ss_pred             CccCCCchhhhhh--HHHHHHHHhc
Confidence            5899999987664  8999998877

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1842 consensus FYVE finger-containing protein [General function prediction only]

Probab=81.82  E-value=0.52  Score=42.23  Aligned_cols=29  Identities=24%  Similarity=0.642  Sum_probs=26.9

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      .|.||+|+.-+|++-.|..||+.-|+-+.
T Consensus        15 gflCPiC~~dl~~~~~L~~H~d~eH~~ed   43 (505)
T KOG1842|consen   15 GFLCPICLLDLPNLSALNDHLDVEHFEED   43 (505)
T ss_pred             cccCchHhhhhhhHHHHHHHHhhhccccc
Confidence            38999999999999999999999999765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=80.36  E-value=0.53  Score=29.71  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=0.0

Q ss_pred             eCcccccCCCCcchhhhhhhhCCCCCCCChHHHHHHH
Q 033829           48 ECPLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLH   84 (110)
Q Consensus        48 ~C~VCkaqmPD~Kt~k~HfESKHPK~plp~E~l~d~h   84 (110)
                      +|.+|....+++..+.+|....|.-..-..+.|.+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~   37 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPN   37 (100)
T ss_dssp             -------------------------------------
T ss_pred             Ccccccccccccccccccccccccccccccccccccc
Confidence            5999999999999999999999976543344344433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	99.37
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	99.19
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	92.73
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	91.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	90.86
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	90.77
1paa_A	30	Yeast transcription factor ADR1; transcription reg	90.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	90.22
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	90.05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	89.53
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	89.29
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	88.79
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	88.78
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	88.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	88.3
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	88.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	87.98
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	87.87
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	87.77
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	87.6
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	87.44
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	87.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	87.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	87.23
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	87.2
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	87.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	87.02
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	86.98
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	86.78
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	86.74
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	86.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	86.65
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	86.56
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	86.52
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	86.51
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	86.48
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	86.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	86.37
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	86.35
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	86.27
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	86.24
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	86.21
1ard_A	29	Yeast transcription factor ADR1; transcription reg	86.19
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	86.17
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	86.16
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	86.13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	86.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	86.06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	85.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	85.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	85.71
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	85.68
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.66
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	85.66
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	85.63
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	85.56
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	85.53
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	85.53
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.48
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.43
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	85.43
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.42
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	85.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	85.34
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	85.32
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	85.3
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	85.27
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	85.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	85.16
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	85.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	85.08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	85.01
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	84.98
3vhs_A	29	ATPase wrnip1; zinc finger, ubiquitin-binding doma	84.97
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	84.96
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	84.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	84.86
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	84.82
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	84.75
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.72
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	84.7
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	84.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	84.46
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	84.4
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	84.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	84.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	84.26
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	84.17
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	84.16
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	84.11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	84.06
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	84.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	83.95
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	83.95
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	83.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	83.89
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	83.89
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	83.74
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	83.74
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	83.71
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	83.71
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	83.64
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	83.6
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	83.57
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	84.08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	83.48
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	83.44
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	82.96
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	82.93
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	82.92
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	82.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	82.88
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	82.87
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	82.82
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	82.78
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	82.69
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	82.6
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	82.46
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	82.46
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	82.45
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	82.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	82.39
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	82.33
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	82.32
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	82.2
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	82.17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	82.05
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	81.99
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	81.98
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	81.9
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	81.87
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	82.59
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	81.75
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	81.69
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	81.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	81.33
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	81.32
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	81.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	81.2
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	81.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	80.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	80.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	80.55
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.47
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	80.36
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	80.27
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	80.2

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1

Probab=99.37  E-value=3.7e-14  Score=98.21  Aligned_cols=41  Identities=17%  Similarity=0.312  Sum_probs=35.9

Q ss_pred             ccccccccceeeeeCccccc---CCCCcchhhhhhhhCCCCCCCC
Q 033829           35 DRTGREKGGHAKYECPLCKV---TAPDIKSMQIHHDARHPKLPFD   76 (110)
Q Consensus        35 dR~g~~k~galk~~C~VCka---qmPD~Kt~k~HfESKHPK~plp   76 (110)
                      +.+.. .+.+++++|+||++   +|||+++|++||||||||++|+
T Consensus        35 SQlka-n~~A~~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~~~~   78 (86)
T 1wvk_A           35 SQLEA-NKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVV   78 (86)
T ss_dssp             CSSCC-CCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGG
T ss_pred             hhHHH-HHHhhCCCChHhHhhHHhcCChHHHHHHHHcCCCCCCHH
Confidence            44433 56889999999999   9999999999999999999874

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=99.19  E-value=2.8e-12  Score=73.22  Aligned_cols=24  Identities=38%  Similarity=0.865  Sum_probs=22.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .||+||||++||||+|||++|||.
T Consensus         2 ~k~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            2 SDFCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             CCEECTTSSCEESSHHHHHHHHHH
T ss_pred             CcccCccccccCcChHHHHHHHHH
Confidence            589999999999999999999984

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=98.37  E-value=6.2e-08  Score=57.13  Aligned_cols=27  Identities=22%  Similarity=0.407  Sum_probs=25.6

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      |.||+||.++.++..|..|||++|+-.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            999999999999999999999999854

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=92.73  E-value=0.064  Score=25.25  Aligned_cols=27  Identities=26%  Similarity=0.737  Sum_probs=22.9

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      .|.|++|.........|..|...-|..
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            389999999999999999998776544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.41  E-value=0.081  Score=31.09  Aligned_cols=26  Identities=19%  Similarity=0.597  Sum_probs=13.3

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      |.|++|.........|..|....|+.
T Consensus        46 ~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           46 FHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            45555555555555555555555543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=90.86  E-value=0.049  Score=31.52  Aligned_cols=23  Identities=17%  Similarity=0.473  Sum_probs=12.4

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H~~~   31 (70)
T 1x5w_A            9 PEKCSECSYSCSSKAALRIHERI   31 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            35555555555555555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=90.77  E-value=0.18  Score=29.55  Aligned_cols=34  Identities=15%  Similarity=0.394  Sum_probs=26.3

Q ss_pred             ccceeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           41 KGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        41 k~galk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..+.-.|.|++|.........|..|...-+...|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   46 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP   46 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC
Confidence            3455679999999999999999999876444333

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=90.44  E-value=0.18  Score=23.89  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=22.6

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      .|.|++|.........|.+|....|..
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            389999999999999999996666654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.22  E-value=0.11  Score=30.52  Aligned_cols=33  Identities=21%  Similarity=0.492  Sum_probs=27.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCCCh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPFDE   77 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~   77 (110)
                      ..|.|++|.........|..|....|+.+...+
T Consensus        37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A           37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             cccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            458999999999999999999989998775443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.05  E-value=0.15  Score=31.74  Aligned_cols=33  Identities=21%  Similarity=0.404  Sum_probs=24.0

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCCCChH
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLPFDEA   78 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~E   78 (110)
                      .|.|++|.........|+.|...-|...|++++
T Consensus        54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           54 ALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            477888877777777777777777766665554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=89.53  E-value=0.17  Score=30.24  Aligned_cols=25  Identities=24%  Similarity=0.586  Sum_probs=13.9

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      |.|++|.....+...|..|...-|.
T Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~h~~   60 (95)
T 2yt9_A           36 YSCPVCGLRFKRKDRMSYHVRSHDG   60 (95)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHHCC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcC
Confidence            5555555555555555555554444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.29  E-value=0.26  Score=25.43  Aligned_cols=30  Identities=27%  Similarity=0.404  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.........|..|...-....|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTVKSG   38 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSCCSS
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            459999999999999999999876333333

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.79  E-value=0.39  Score=25.49  Aligned_cols=31  Identities=23%  Similarity=0.483  Sum_probs=24.7

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A           11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             SSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998764433343

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.78  E-value=0.27  Score=25.76  Aligned_cols=31  Identities=13%  Similarity=0.229  Sum_probs=25.0

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            4699999999999999999998774444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=88.50  E-value=0.25  Score=26.15  Aligned_cols=33  Identities=15%  Similarity=0.142  Sum_probs=26.1

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPFD   76 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp   76 (110)
                      ...|.|++|.........|..|...-+-..|++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            356999999999999999999987654444543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=88.30  E-value=0.18  Score=32.12  Aligned_cols=32  Identities=25%  Similarity=0.463  Sum_probs=18.9

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCCCCh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLPFDE   77 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~   77 (110)
                      .|.|++|.-.......|+.|....|...|+.+
T Consensus        62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           62 MFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             CeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            46666666666666666666444555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=88.07  E-value=0.23  Score=23.01  Aligned_cols=22  Identities=23%  Similarity=0.612  Sum_probs=19.8

Q ss_pred             eeCcccccCCCCcchhhhhhhh
Q 033829           47 YECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      |.|++|.........|..|...
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHHH
Confidence            7899999999999999999764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.98  E-value=0.35  Score=25.57  Aligned_cols=31  Identities=16%  Similarity=0.331  Sum_probs=24.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CCEECCccCcccCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998764333343

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=87.87  E-value=0.22  Score=27.59  Aligned_cols=28  Identities=21%  Similarity=0.348  Sum_probs=19.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      .|.|++|.........|..|....|+.+
T Consensus        30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           30 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4777777777777777777776666543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.77  E-value=0.32  Score=25.02  Aligned_cols=31  Identities=19%  Similarity=0.364  Sum_probs=24.2

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+-..|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP   39 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            3569999999999999999999875333333

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=87.66  E-value=0.27  Score=24.16  Aligned_cols=25  Identities=20%  Similarity=0.345  Sum_probs=21.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      -.|.|++|.........|..|...-
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h   30 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREV   30 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHH
Confidence            4599999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=87.60  E-value=0.22  Score=31.99  Aligned_cols=28  Identities=21%  Similarity=0.419  Sum_probs=15.0

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      .|.|++|.........|..|.+..||.+
T Consensus        56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           56 VFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             ccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3555555555555555555555555543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.44  E-value=0.33  Score=25.19  Aligned_cols=30  Identities=17%  Similarity=0.454  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      -.|.|++|.........|..|...-+...|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGP   39 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSCCSS
T ss_pred             CCEECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            469999999999999999999775433333

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=87.23  E-value=0.24  Score=23.24  Aligned_cols=23  Identities=22%  Similarity=0.454  Sum_probs=20.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILL   24 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            48999999999999999999764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=87.23  E-value=0.35  Score=24.96  Aligned_cols=31  Identities=16%  Similarity=0.244  Sum_probs=24.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999998764443343

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.23  E-value=0.34  Score=25.63  Aligned_cols=32  Identities=19%  Similarity=0.426  Sum_probs=25.1

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC
Confidence            35699999999999999999998764444343

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.20  E-value=0.38  Score=25.62  Aligned_cols=31  Identities=19%  Similarity=0.399  Sum_probs=24.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A           11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             cccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            5699999999999999999998653333333

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=87.10  E-value=0.27  Score=28.73  Aligned_cols=25  Identities=24%  Similarity=0.549  Sum_probs=12.8

Q ss_pred             eeCcccccCCCCcchhhhhhhhCCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      |.|++|.........|..|....|.
T Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~~~   40 (86)
T 1x6h_A           16 YACSHCDKTFRQKQLLDMHFKRYHD   40 (86)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcC
Confidence            5555555555555555555544443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=87.02  E-value=0.36  Score=22.28  Aligned_cols=23  Identities=17%  Similarity=0.518  Sum_probs=19.8

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            37899999999999999998754

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.98  E-value=0.4  Score=25.20  Aligned_cols=31  Identities=19%  Similarity=0.401  Sum_probs=25.0

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A           11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             CSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998874444443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=86.78  E-value=0.31  Score=26.62  Aligned_cols=24  Identities=17%  Similarity=0.398  Sum_probs=14.7

Q ss_pred             eeCcccccCCCCcchhhhhhhhCC
Q 033829           47 YECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        47 ~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      |.|++|.....+...|..|...-+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~   25 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHT   25 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcC
Confidence            566666666666666666665533

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.74  E-value=0.41  Score=24.85  Aligned_cols=24  Identities=21%  Similarity=0.366  Sum_probs=21.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRT   34 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTT
T ss_pred             cCeECCCCCCccCCHHHHHHHhhh
Confidence            469999999999999999999865

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=86.66  E-value=0.22  Score=23.17  Aligned_cols=23  Identities=13%  Similarity=0.260  Sum_probs=19.8

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|.+|...
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHH
Confidence            38999999999999999998754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.65  E-value=0.39  Score=29.79  Aligned_cols=33  Identities=9%  Similarity=0.224  Sum_probs=26.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCCCh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPFDE   77 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~   77 (110)
                      ..|.|++|.........|..|....|+...++.
T Consensus        79 ~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           79 KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             cceECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            458899998888888889999888887766654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.56  E-value=0.46  Score=25.06  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=24.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCC
Confidence            35699999999999999999997653333333

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.52  E-value=0.46  Score=25.08  Aligned_cols=31  Identities=13%  Similarity=0.322  Sum_probs=24.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-+...||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4699999999999999999998764444343

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.51  E-value=0.36  Score=25.63  Aligned_cols=31  Identities=23%  Similarity=0.477  Sum_probs=24.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      .-.|.|++|.........|..|...-.-..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHcCCCCC
Confidence            3569999999999999999999876433333

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=86.48  E-value=0.41  Score=24.60  Aligned_cols=30  Identities=20%  Similarity=0.393  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.........|..|...-.-..|
T Consensus        10 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~   39 (42)
T 2epc_A           10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGP   39 (42)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTTCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHhhhcCCCCC
Confidence            469999999999999999999876433333

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.42  E-value=0.43  Score=24.58  Aligned_cols=31  Identities=23%  Similarity=0.416  Sum_probs=24.2

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+...|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGP   38 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCC
Confidence            3569999999999999999999765433333

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=86.37  E-value=0.23  Score=23.31  Aligned_cols=23  Identities=22%  Similarity=0.456  Sum_probs=20.0

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHh
Confidence            48999999999999999999764

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.35  E-value=0.47  Score=24.92  Aligned_cols=31  Identities=16%  Similarity=0.299  Sum_probs=24.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPS   41 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCC
T ss_pred             CCeECCCCCCccCchHHHHHHHHhcCCCCCC
Confidence            5699999999999999999998764444443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.27  E-value=0.39  Score=24.94  Aligned_cols=26  Identities=19%  Similarity=0.494  Sum_probs=22.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      -.|.|++|.........|..|...-+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eof_A           11 KPYECNECQKAFNTKSNLMVHQRTHT   36 (44)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHTT
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHhC
Confidence            46999999999999999999987643

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.24  E-value=0.47  Score=25.15  Aligned_cols=31  Identities=13%  Similarity=0.325  Sum_probs=24.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-....||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A           11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             cCCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999998764444444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=86.21  E-value=0.31  Score=26.95  Aligned_cols=29  Identities=14%  Similarity=0.411  Sum_probs=24.0

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      .|.|++|.........|..|...-+...|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   30 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKP   30 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCC
Confidence            48999999999999999999987444434

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=86.19  E-value=0.31  Score=22.74  Aligned_cols=23  Identities=13%  Similarity=0.430  Sum_probs=20.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            38999999999999999999765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.17  E-value=0.39  Score=25.26  Aligned_cols=32  Identities=16%  Similarity=0.406  Sum_probs=25.1

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998764443343

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.16  E-value=0.5  Score=25.03  Aligned_cols=32  Identities=19%  Similarity=0.407  Sum_probs=24.3

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-....||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999997643333333

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.13  E-value=0.51  Score=24.89  Aligned_cols=32  Identities=16%  Similarity=0.341  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-....||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998764333333

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.09  E-value=0.49  Score=25.05  Aligned_cols=32  Identities=22%  Similarity=0.372  Sum_probs=25.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPFD   76 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp   76 (110)
                      -.|.|++|.........|..|...-+...||.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A           11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46999999999999999999987644444443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=86.06  E-value=0.41  Score=25.28  Aligned_cols=32  Identities=19%  Similarity=0.377  Sum_probs=24.9

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPS   41 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998754333343

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.90  E-value=0.52  Score=24.76  Aligned_cols=26  Identities=15%  Similarity=0.266  Sum_probs=22.7

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ...|.|++|.........|..|...-
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CCCeeCCCCCchhCCHHHHHHHHHHc
Confidence            35699999999999999999998763

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.89  E-value=0.35  Score=25.55  Aligned_cols=32  Identities=19%  Similarity=0.434  Sum_probs=25.2

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998764444343

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=85.71  E-value=0.5  Score=28.17  Aligned_cols=28  Identities=11%  Similarity=0.261  Sum_probs=17.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      ..|.|++|.....+...|..|...-+..
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   34 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGV   34 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCC
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            4466777766666666666666654443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.68  E-value=0.49  Score=24.87  Aligned_cols=32  Identities=16%  Similarity=0.345  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPS   41 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            35699999999999999999997764333343

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.66  E-value=0.44  Score=25.26  Aligned_cols=32  Identities=19%  Similarity=0.413  Sum_probs=25.2

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             CCCeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998764444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.66  E-value=0.53  Score=24.82  Aligned_cols=27  Identities=15%  Similarity=0.332  Sum_probs=22.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      ...|.|++|.........|..|...-+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQVIHT   36 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred             CCCeECCcCChhhCCHHHHHHHHHHhC
Confidence            356999999999999999999987533

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.63  E-value=0.49  Score=24.75  Aligned_cols=30  Identities=27%  Similarity=0.439  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      -.|.|++|.........|..|...-....|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQKTHAAKSG   40 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGGGGCCCCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            469999999999999999999875433333

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=85.56  E-value=0.43  Score=24.42  Aligned_cols=30  Identities=17%  Similarity=0.401  Sum_probs=23.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.........|..|...-...-|
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            359999999999999999999775333333

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=85.53  E-value=0.28  Score=22.86  Aligned_cols=23  Identities=26%  Similarity=0.504  Sum_probs=20.4

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.....+...|..|...
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~   25 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLET   25 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHT
T ss_pred             CccCCCCCcccCCHHHHHHHHHH
Confidence            48999999999999999999764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.53  E-value=0.52  Score=24.85  Aligned_cols=31  Identities=16%  Similarity=0.320  Sum_probs=24.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|+.|...-+-..||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS   41 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCC
Confidence            5699999999999999999998753333333

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.48  E-value=0.46  Score=25.08  Aligned_cols=32  Identities=19%  Similarity=0.513  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998754333343

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.43  E-value=0.34  Score=24.02  Aligned_cols=24  Identities=13%  Similarity=0.236  Sum_probs=21.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCeecCcCCCCcCchHHHHHHHHH
Confidence            469999999999999999999754

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.43  E-value=0.46  Score=25.07  Aligned_cols=32  Identities=25%  Similarity=0.527  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCC
Confidence            35699999999999999999998764433343

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.42  E-value=0.45  Score=25.01  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=24.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHS   41 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSC
T ss_pred             CCccCCccChhhCCHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999997654333333

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=85.38  E-value=0.55  Score=24.74  Aligned_cols=32  Identities=16%  Similarity=0.462  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-....||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            35699999999999999999998763333333

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.34  E-value=0.65  Score=24.46  Aligned_cols=32  Identities=16%  Similarity=0.310  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            35699999999999999999997654333343

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=85.32  E-value=0.71  Score=28.07  Aligned_cols=31  Identities=16%  Similarity=0.412  Sum_probs=22.1

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.....+...|..|...-+...+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   45 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERP   45 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            3467888888888888888888776554443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.30  E-value=0.49  Score=24.86  Aligned_cols=25  Identities=16%  Similarity=0.307  Sum_probs=21.9

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhh
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ...|.|++|.........|..|...
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRI   34 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CcCEECCCCChhhCChHHHHHHHHh
Confidence            3569999999999999999999765

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.27  E-value=0.43  Score=25.10  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998764433343

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=85.25  E-value=0.52  Score=24.94  Aligned_cols=25  Identities=20%  Similarity=0.352  Sum_probs=21.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ..|.|++|.........|..|...-
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A           11 KCFKCNKCEKTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCEECSSSCCEESSSHHHHHHHTTC
T ss_pred             CCEECcCCCCcCCCHHHHHHHHHHc
Confidence            4699999999999999999998653

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=85.16  E-value=0.53  Score=24.73  Aligned_cols=32  Identities=19%  Similarity=0.316  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            34699999999999999999998764433343

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.08  E-value=0.52  Score=24.87  Aligned_cols=32  Identities=16%  Similarity=0.308  Sum_probs=24.3

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCC
Confidence            34699999999999999999997653333333

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=85.08  E-value=0.38  Score=25.31  Aligned_cols=32  Identities=22%  Similarity=0.404  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998764433343

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=85.01  E-value=0.36  Score=29.80  Aligned_cols=31  Identities=16%  Similarity=0.524  Sum_probs=19.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.....+...|..|...-+...||
T Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (124)
T 2dlq_A           65 QVFTCSVCQETFRRRMELRLHMVSHTGEMPY   95 (124)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            3467777777777777777776655544443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.98  E-value=0.48  Score=24.91  Aligned_cols=31  Identities=16%  Similarity=0.193  Sum_probs=24.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|+.|...-+...||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en8_A           11 KSHTCDECGKNFCYISALRIHQRVHMGEKCS   41 (46)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHTTTCCSCSS
T ss_pred             CCeECCCcCcccCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998653333333

>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}

Probab=84.97  E-value=0.18  Score=28.79  Aligned_cols=21  Identities=24%  Similarity=0.678  Sum_probs=14.7

Q ss_pred             eeeeCcccccCCCCcchhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHH   66 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~Hf   66 (110)
                      +...||||..+||-. +...|.
T Consensus         5 f~vqcpvcqq~mpaa-hin~hl   25 (29)
T 3vhs_A            5 FQVQCPVCQQMMPAA-HINSHL   25 (29)
T ss_dssp             CEEECTTTCCEEEGG-GHHHHH
T ss_pred             eeeeChHHHHhCcHH-HHHHHH
Confidence            678999998888853 334443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.96  E-value=0.46  Score=25.26  Aligned_cols=32  Identities=13%  Similarity=0.145  Sum_probs=24.9

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+-..||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS   41 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC
Confidence            35699999999999999999998764433343

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=84.91  E-value=0.19  Score=34.64  Aligned_cols=24  Identities=17%  Similarity=0.358  Sum_probs=21.8

Q ss_pred             eeeCcccccCCCCcchhhhhhhhC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      .+.|.+|.+++.+..++..||.+|
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gk   55 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSR   55 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCH
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcH
Confidence            478999999999999999999854

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.86  E-value=0.31  Score=25.57  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=24.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+-..||
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A           11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CCeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998764444443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.82  E-value=0.65  Score=24.56  Aligned_cols=26  Identities=19%  Similarity=0.386  Sum_probs=22.6

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ...|.|++|.........|..|...-
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytq_A           10 EKPYGCSECGKAFSSKSYLIIHMRTH   35 (46)
T ss_dssp             CCSCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             CCCcCCCccChhhCChHHHHHHHHHh
Confidence            35699999999999999999998763

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=84.75  E-value=0.56  Score=24.81  Aligned_cols=31  Identities=16%  Similarity=0.432  Sum_probs=24.6

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+-..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A           10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            3569999999999999999999876433333

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.72  E-value=0.31  Score=24.42  Aligned_cols=26  Identities=23%  Similarity=0.666  Sum_probs=22.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      ..|.|++|.........|..|...-+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            46999999999999999999987633

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=84.70  E-value=0.48  Score=23.37  Aligned_cols=24  Identities=13%  Similarity=0.304  Sum_probs=21.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGG
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHH
Confidence            469999999999999999999765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.58  E-value=0.48  Score=24.92  Aligned_cols=28  Identities=25%  Similarity=0.307  Sum_probs=24.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      ..|.|++|.........|..|....|..
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~   38 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTG   38 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTT
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCC
Confidence            4699999999999999999998855653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=84.46  E-value=0.6  Score=28.77  Aligned_cols=36  Identities=19%  Similarity=0.483  Sum_probs=26.4

Q ss_pred             CCcccccccccccccceeeeeCcccccCCCCcchhhhhhhh
Q 033829           28 GGKAGMADRTGREKGGHAKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        28 GGkaG~~dR~g~~k~galk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.+|+....+.     ..|.|++|.....+...|..|...
T Consensus         3 s~ss~~~~h~~~-----~~~~C~~C~~~f~~~~~l~~H~~~   38 (107)
T 1wjp_A            3 SGSSGASPVENK-----EVYQCRLCNAKLSSLLEQGSHERL   38 (107)
T ss_dssp             CCCCCCCCCCCC-----CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CccccCcccCCC-----cCeECCCCCCccCCHHHHHHHHHH
Confidence            345666555543     568999999888888888888765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.40  E-value=0.53  Score=24.82  Aligned_cols=32  Identities=13%  Similarity=0.283  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999997654433343

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=84.72  E-value=0.19  Score=23.39  Aligned_cols=23  Identities=17%  Similarity=0.297  Sum_probs=19.6

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            48999999999999999988653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=84.30  E-value=0.5  Score=28.81  Aligned_cols=30  Identities=20%  Similarity=0.485  Sum_probs=21.4

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .|.|++|.....+...|..|...-+...+|
T Consensus        45 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   74 (106)
T 2ee8_A           45 PYTCDICHKAFRRQDHLRDHRYIHSKEKPF   74 (106)
T ss_dssp             CCBCSSSCCBCSCHHHHHHHGGGSCCCCTT
T ss_pred             CcCCCCccchhCCHHHHHHHHHHhCCCCCe
Confidence            478888888888888888887665544443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.26  E-value=0.58  Score=24.56  Aligned_cols=31  Identities=16%  Similarity=0.246  Sum_probs=24.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCSCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999998654433343

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.17  E-value=0.59  Score=24.63  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=24.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999997763333333

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=84.16  E-value=0.41  Score=23.93  Aligned_cols=24  Identities=17%  Similarity=0.564  Sum_probs=21.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus        10 k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCccCCCCCcccCcHHHHHHHHHH
Confidence            469999999999999999999754

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.11  E-value=0.61  Score=24.67  Aligned_cols=31  Identities=16%  Similarity=0.420  Sum_probs=24.7

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5699999999999999999998764433343

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=84.06  E-value=0.54  Score=24.67  Aligned_cols=26  Identities=15%  Similarity=0.372  Sum_probs=22.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      .-.|.|++|.........|..|...-
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIH   35 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHc
Confidence            35699999999999999999998653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=84.02  E-value=0.34  Score=22.69  Aligned_cols=23  Identities=26%  Similarity=0.631  Sum_probs=20.0

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHHH
Confidence            48999999999999999999753

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.95  E-value=0.55  Score=24.75  Aligned_cols=26  Identities=19%  Similarity=0.479  Sum_probs=22.5

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ...|.|++|.........|..|...-
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIH   35 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHh
Confidence            35699999999999999999997653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=83.95  E-value=0.63  Score=27.12  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=25.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        45 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           45 KPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             cCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4599999999999999999999765554444

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.89  E-value=0.58  Score=24.65  Aligned_cols=31  Identities=16%  Similarity=0.266  Sum_probs=24.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytj_A           11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCCCCS
T ss_pred             cCeECCCCChhhCCHHHHHHHHHHcCCCCCC
Confidence            4699999999999999999998764433343

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=83.89  E-value=0.57  Score=23.46  Aligned_cols=23  Identities=22%  Similarity=0.444  Sum_probs=20.4

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.-.......|..|...
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~   24 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITL   24 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             cccCCCCCchhCCHHHHHHHHHH
Confidence            38999999999999999999765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=83.89  E-value=0.58  Score=24.77  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=24.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+...|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            3569999999999999999999876333333

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.74  E-value=0.51  Score=24.55  Aligned_cols=25  Identities=20%  Similarity=0.396  Sum_probs=21.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ..|.|++|.........|..|...-
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eoj_A           11 NPYECCECGKVFSRKDQLVSHQKTH   35 (44)
T ss_dssp             CSCEETTTTEECSSHHHHHHHHTTS
T ss_pred             cCeeCCCCCCccCCHHHHHHHHHHc
Confidence            4699999999999999999997653

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.74  E-value=0.32  Score=25.81  Aligned_cols=32  Identities=13%  Similarity=0.200  Sum_probs=25.1

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             CCCeECcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            34699999999999999999998764444343

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.71  E-value=0.62  Score=24.55  Aligned_cols=32  Identities=16%  Similarity=0.246  Sum_probs=24.7

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      .-.|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq0_A           10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPS   41 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHTTTCCCCCS
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999997663333333

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=83.71  E-value=0.61  Score=24.68  Aligned_cols=32  Identities=19%  Similarity=0.479  Sum_probs=24.7

Q ss_pred             ceeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           43 GHAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        43 galk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      +.-.|.|++|.........|..|...-+...|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            33569999999999999999999776333333

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.64  E-value=0.69  Score=24.44  Aligned_cols=32  Identities=13%  Similarity=0.244  Sum_probs=24.9

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            35699999999999999999998754433343

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=83.60  E-value=0.31  Score=27.50  Aligned_cols=26  Identities=27%  Similarity=0.517  Sum_probs=19.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      ..|.|++|.........|..|....|
T Consensus        39 ~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A           39 KVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHHc
Confidence            35778888777777777777776655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=83.57  E-value=0.74  Score=24.12  Aligned_cols=24  Identities=13%  Similarity=0.228  Sum_probs=21.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRT   34 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHH
T ss_pred             CCeeCCCCCCccCCHHHHHHHHHH
Confidence            469999999999999999999876

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=84.08  E-value=0.22  Score=23.46  Aligned_cols=23  Identities=26%  Similarity=0.427  Sum_probs=19.9

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.....+...|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            48999999999999999998754

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.48  E-value=0.59  Score=24.72  Aligned_cols=24  Identities=13%  Similarity=0.188  Sum_probs=21.7

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeECCcCCCccCCHHHHHHHHHH
Confidence            469999999999999999999865

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=83.44  E-value=0.46  Score=26.06  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=24.8

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCCChH
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPFDEA   78 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~E   78 (110)
                      -.|.|++|.........|+.|....|..+..+.+
T Consensus         6 kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~~~   39 (48)
T 3iuf_A            6 KPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED   39 (48)
T ss_dssp             SCEECTTTCCEESSHHHHHHHHHHSSCC------
T ss_pred             cCEECCCcCcccCCHHHHHHHhhhhcCCCCCCCC
Confidence            4599999999999999999999867876655433

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.96  E-value=0.7  Score=24.32  Aligned_cols=25  Identities=16%  Similarity=0.327  Sum_probs=22.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ..|.|++|.........|..|...-
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIH   35 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCeECCCCCchhCChHHHHHHHhhc
Confidence            4699999999999999999998763

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=82.93  E-value=0.55  Score=27.94  Aligned_cols=33  Identities=18%  Similarity=0.454  Sum_probs=27.1

Q ss_pred             ceeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           43 GHAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        43 galk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      +.-.|.|++|.....+...|..|...-+...+|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   36 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPY   36 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSE
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCC
Confidence            446799999999999999999999876555443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.92  E-value=0.52  Score=24.84  Aligned_cols=32  Identities=13%  Similarity=0.318  Sum_probs=24.9

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998764333343

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.91  E-value=0.51  Score=24.89  Aligned_cols=31  Identities=13%  Similarity=0.234  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-+-..||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCCCCCC
Confidence            4699999999999999999997653333333

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.90  E-value=0.4  Score=23.76  Aligned_cols=24  Identities=21%  Similarity=0.592  Sum_probs=20.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      -.|.|++|.........|..|...
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH
Confidence            469999999999999999999754

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.88  E-value=0.54  Score=24.89  Aligned_cols=31  Identities=13%  Similarity=0.235  Sum_probs=24.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em2_A           11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCSS
T ss_pred             CCEECCcCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5699999999999999999998764433333

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=82.87  E-value=0.39  Score=27.80  Aligned_cols=32  Identities=19%  Similarity=0.369  Sum_probs=25.5

Q ss_pred             ceeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           43 GHAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        43 galk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      +...|.|++|.........|+.|...-+...|
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~   42 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKP   42 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCC
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            34579999999999999999999887554444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.82  E-value=0.51  Score=24.98  Aligned_cols=31  Identities=23%  Similarity=0.353  Sum_probs=24.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-....||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A           11 RPYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            4699999999999999999998764444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.78  E-value=0.48  Score=25.09  Aligned_cols=26  Identities=19%  Similarity=0.496  Sum_probs=22.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      -.|.|++|.........|..|...-.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQQSHT   36 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCEECcccCCccCCHhHHHHHHHHcC
Confidence            46999999999999999999987633

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=82.69  E-value=0.58  Score=24.65  Aligned_cols=32  Identities=16%  Similarity=0.356  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ema_A           10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPS   41 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHTGGGCCCCC
T ss_pred             CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCC
Confidence            35699999999999999999998764433343

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.60  E-value=0.63  Score=24.45  Aligned_cols=30  Identities=17%  Similarity=0.326  Sum_probs=24.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.........|..|...-+..-|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKS   38 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCC
Confidence            469999999999999999999876443333

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=82.46  E-value=0.36  Score=26.33  Aligned_cols=25  Identities=20%  Similarity=0.327  Sum_probs=17.0

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      -.|.|++|.....+...|..|...-
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h   27 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTH   27 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHc
Confidence            3577777777777777777776653

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.46  E-value=0.73  Score=24.25  Aligned_cols=31  Identities=13%  Similarity=0.246  Sum_probs=24.3

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+-..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            3569999999999999999999876333333

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.45  E-value=0.72  Score=24.15  Aligned_cols=26  Identities=15%  Similarity=0.208  Sum_probs=22.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      ..|.|++|.........|..|...-.
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eou_A           11 TTSECQECGKIFRHSSLLIEHQALHA   36 (44)
T ss_dssp             CCCCCTTTCCCCSSHHHHHHHHHHHT
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHHC
Confidence            46999999999999999999977633

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.41  E-value=0.62  Score=24.44  Aligned_cols=32  Identities=16%  Similarity=0.275  Sum_probs=24.7

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998654333333

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.39  E-value=0.37  Score=25.36  Aligned_cols=32  Identities=19%  Similarity=0.305  Sum_probs=24.6

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   41 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPS   41 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCS
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCC
Confidence            35699999999999999999997764333333

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=82.33  E-value=0.76  Score=24.07  Aligned_cols=31  Identities=16%  Similarity=0.279  Sum_probs=24.3

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTSCCCC
T ss_pred             cCeECCccccccCChHHHHHHHHHhCCCCCC
Confidence            5699999999999999999997663333333

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=82.32  E-value=0.53  Score=24.91  Aligned_cols=26  Identities=15%  Similarity=0.362  Sum_probs=22.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      -.|.|++|.........|..|...-.
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emj_A           11 KPFECAECGKSFSISSQLATHQRIHT   36 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHhC
Confidence            46999999999999999999987633

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.20  E-value=0.59  Score=24.64  Aligned_cols=31  Identities=13%  Similarity=0.047  Sum_probs=24.6

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-....||
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNS   41 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHSCCSCC
T ss_pred             CCEEccccChhhCCHHHHHHHHHHhCCCCCC
Confidence            4699999999999999999998764444444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=82.17  E-value=0.58  Score=24.66  Aligned_cols=31  Identities=19%  Similarity=0.323  Sum_probs=24.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A           11 NPYECHECGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             cCcCCCCCCcccCcHHHHHHHHHHcCCCCCC
Confidence            4699999999999999999998764433333

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=82.05  E-value=0.55  Score=27.18  Aligned_cols=33  Identities=15%  Similarity=0.422  Sum_probs=23.7

Q ss_pred             ceeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           43 GHAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        43 galk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      +.-.|.|++|.........|..|...-+...||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   46 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPY   46 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSE
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCE
Confidence            335688888888888888888887765554443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=81.99  E-value=0.54  Score=24.76  Aligned_cols=31  Identities=19%  Similarity=0.430  Sum_probs=25.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...++
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            4699999999999999999998775544444

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=81.98  E-value=0.52  Score=27.49  Aligned_cols=30  Identities=23%  Similarity=0.514  Sum_probs=26.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      .-.|.|++|.........|+.|....|...
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~   42 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTEN   42 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCC
Confidence            356999999999999999999998888753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=81.90  E-value=0.39  Score=26.17  Aligned_cols=26  Identities=27%  Similarity=0.685  Sum_probs=22.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARH   70 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKH   70 (110)
                      -.|.|++|.........|..|...-|
T Consensus        31 ~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           31 KPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35999999999999999999988765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=81.87  E-value=0.59  Score=24.61  Aligned_cols=32  Identities=16%  Similarity=0.359  Sum_probs=24.7

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A           10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             CCSEEETTTTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHhhCCCCCC
Confidence            35699999999999999999998763333333

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=82.59  E-value=0.28  Score=23.17  Aligned_cols=23  Identities=17%  Similarity=0.381  Sum_probs=19.5

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQ   24 (29)
Confidence            38999999999999999888653

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=81.75  E-value=0.96  Score=24.26  Aligned_cols=31  Identities=16%  Similarity=0.427  Sum_probs=25.1

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ..|.|++|.........|..|...-+...||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   41 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCc
Confidence            5699999999999999999998764444444

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=81.69  E-value=0.62  Score=28.70  Aligned_cols=30  Identities=20%  Similarity=0.444  Sum_probs=19.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.....+...|..|...-+...|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   35 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKP   35 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCS
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCC
Confidence            457777777777777777777665554443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=81.44  E-value=0.36  Score=22.90  Aligned_cols=23  Identities=43%  Similarity=0.987  Sum_probs=19.7

Q ss_pred             eeeCcccccCCCCcchhhhhhhh
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      .|.|++|.........|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTT
T ss_pred             CcCCCCCCcccCCHHHHHHHHHh
Confidence            48999999999999999999753

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=81.33  E-value=0.47  Score=25.05  Aligned_cols=32  Identities=19%  Similarity=0.344  Sum_probs=25.0

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      ...|.|++|.........|..|...-+...||
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CcCeECCCCCcccCchHHHHHHHHHcCCCCCC
Confidence            35699999999999999999998764333333

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.32  E-value=0.66  Score=23.09  Aligned_cols=24  Identities=21%  Similarity=0.350  Sum_probs=21.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCEECCCCCceeCCHHHHHHHHHH
Confidence            569999999999999999999764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=81.29  E-value=0.65  Score=24.35  Aligned_cols=26  Identities=12%  Similarity=0.201  Sum_probs=22.4

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ...|.|++|.........|..|...-
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIH   35 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHh
Confidence            35699999999999999999997763

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=81.20  E-value=0.75  Score=26.32  Aligned_cols=33  Identities=12%  Similarity=0.321  Sum_probs=29.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCCCh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPFDE   77 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~plp~   77 (110)
                      ..|.|++|.........|..|...-|...|-|.
T Consensus        36 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A           36 RPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            459999999999999999999999888777664

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=81.10  E-value=0.57  Score=25.47  Aligned_cols=27  Identities=15%  Similarity=0.434  Sum_probs=23.5

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      ..|.|++|.........|..|..+.|.
T Consensus        28 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A           28 RPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            359999999999999999999887654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=80.96  E-value=0.7  Score=25.63  Aligned_cols=29  Identities=17%  Similarity=0.258  Sum_probs=24.8

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPK   72 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK   72 (110)
                      .-.|.|++|.........|..|....|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   38 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTS   38 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            35699999999999999999999866754

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.82  E-value=0.63  Score=24.50  Aligned_cols=31  Identities=16%  Similarity=0.326  Sum_probs=24.2

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ...|.|++|.........|..|...-+-..|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            3569999999999999999999875333333

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=80.55  E-value=0.66  Score=27.64  Aligned_cols=30  Identities=27%  Similarity=0.531  Sum_probs=23.4

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      ..|.|++|.....+...|..|...-+...+
T Consensus        35 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A           35 KPYKCKTCDYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCEeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            358899998888888888888887555444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.47  E-value=0.66  Score=23.23  Aligned_cols=24  Identities=25%  Similarity=0.376  Sum_probs=20.0

Q ss_pred             eeeeCcccccCCCCc-chhhhhhhh
Q 033829           45 AKYECPLCKVTAPDI-KSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~-Kt~k~HfES   68 (110)
                      ..|.|++|....... ..|..|...
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCeECCCCChhhccCHHHHHHHHHh
Confidence            469999999888888 889888653

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.36  E-value=0.74  Score=24.22  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=24.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCCCCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHPKLPF   75 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHPK~pl   75 (110)
                      -.|.|++|.........|..|...-....||
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A           11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             cCeECCCCCCeeCChHHHHHHHHHcCCCCCC
Confidence            4699999999999999999997664333343

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.27  E-value=0.46  Score=24.50  Aligned_cols=24  Identities=17%  Similarity=0.418  Sum_probs=21.2

Q ss_pred             eeeeCcccccCCCCcchhhhhhhh
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDA   68 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfES   68 (110)
                      ..|.|++|.........|..|...
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2en2_A           10 KPYKCETCGARFVQVAHLRAHVLI   33 (42)
T ss_dssp             CSEECTTTCCEESSHHHHHHHTHH
T ss_pred             CCEeCCCcChhhCCHHHHHHHHHH
Confidence            469999999999999999999764

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=80.20  E-value=0.57  Score=24.88  Aligned_cols=26  Identities=23%  Similarity=0.358  Sum_probs=22.5

Q ss_pred             eeeeeCcccccCCCCcchhhhhhhhC
Q 033829           44 HAKYECPLCKVTAPDIKSMQIHHDAR   69 (110)
Q Consensus        44 alk~~C~VCkaqmPD~Kt~k~HfESK   69 (110)
                      ...|.|++|.........|+.|...-
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytm_A           10 EKPYKCMECGKAFGDNSSCTQHQRLH   35 (46)
T ss_dssp             CCSSSBTTTTBCCSSHHHHHHHHHHH
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHc
Confidence            35699999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	110
d1wvka_	86	Expressed protein At2g23090/F21P24.15 {Thale cress	97.79
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.65
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	92.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	89.39
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.58
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	84.93
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	82.9

>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Expressed protein At2g23090/F21P24.15
superfamily: Expressed protein At2g23090/F21P24.15
family: Expressed protein At2g23090/F21P24.15
domain: Expressed protein At2g23090/F21P24.15
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=2e-06  Score=58.17  Aligned_cols=35  Identities=23%  Similarity=0.365  Sum_probs=28.7

Q ss_pred             cceeeeeCcccccCC---CCcchhhhhhhhCCCCCCCC
Q 033829           42 GGHAKYECPLCKVTA---PDIKSMQIHHDARHPKLPFD   76 (110)
Q Consensus        42 ~galk~~C~VCkaqm---PD~Kt~k~HfESKHPK~plp   76 (110)
                      ..+..++|.||+...   -..-.|.+|.|+||||.+|.
T Consensus        41 ~~A~~i~C~vCrqtFm~T~~~~~L~eHae~KHpK~~~~   78 (86)
T d1wvka_          41 KKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVV   78 (86)
T ss_dssp             CTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGG
T ss_pred             HHhhccCcHHHHhHHHHHcchHHHHHHHHccCCCCCHH
Confidence            467889999999653   45667999999999999763

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.016  Score=31.70  Aligned_cols=27  Identities=26%  Similarity=0.669  Sum_probs=23.9

Q ss_pred             eeeeCcccccCCCCcchhhhhhhhCCC
Q 033829           45 AKYECPLCKVTAPDIKSMQIHHDARHP   71 (110)
Q Consensus        45 lk~~C~VCkaqmPD~Kt~k~HfESKHP   71 (110)
                      +||.||.|-+...-...+..|..+-|.
T Consensus         1 ak~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           1 AKFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccCCcchhheeehhhhhHHhhhccc
Confidence            489999999999999999999988774

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.39  E-value=0.081  Score=29.18  Aligned_cols=28  Identities=25%  Similarity=0.678  Sum_probs=26.2

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      -|.|..|--...|...++.|..+||.|+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccccccccccccchhhhhhhhcccccC
Confidence            3789999999999999999999999986

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.58  E-value=0.17  Score=27.76  Aligned_cols=29  Identities=28%  Similarity=0.548  Sum_probs=25.3

Q ss_pred             eeeCcccccCCCCcchhhhhhhhCCCCCC
Q 033829           46 KYECPLCKVTAPDIKSMQIHHDARHPKLP   74 (110)
Q Consensus        46 k~~C~VCkaqmPD~Kt~k~HfESKHPK~p   74 (110)
                      -|+|+.|.-|+-+.--|+-|.-+.|-..|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~~p   30 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNSLP   30 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             ceechhHHHHHhhccCceEEEeecccCCc
Confidence            48999999999999999999988886554

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.93  E-value=0.15  Score=31.76  Aligned_cols=41  Identities=17%  Similarity=0.314  Sum_probs=31.6

Q ss_pred             cccccccccccceeeeeCcccccCCCCc---chhhhhhhhCCCC
Q 033829           32 GMADRTGREKGGHAKYECPLCKVTAPDI---KSMQIHHDARHPK   72 (110)
Q Consensus        32 G~~dR~g~~k~galk~~C~VCkaqmPD~---Kt~k~HfESKHPK   72 (110)
                      |.-.+-+++..--....|-+|+.+.+.-   -.|..|.+.+||-
T Consensus         8 GF~~~~~g~i~~~~~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~   51 (60)
T d2ct5a1           8 GFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPE   51 (60)
T ss_dssp             CCCCCSSSCGGGSSCCEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             CccCCCCCceeeccchHHHHHHHHhcccCCcchHHHHHHhcCHH
Confidence            3344556667777889999999998754   4689999999983

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.90  E-value=0.19  Score=27.45  Aligned_cols=31  Identities=26%  Similarity=0.568  Sum_probs=27.0

Q ss_pred             ceeeeeCcccccCCCCcchhhhhhhhCCCCC
Q 033829           43 GHAKYECPLCKVTAPDIKSMQIHHDARHPKL   73 (110)
Q Consensus        43 galk~~C~VCkaqmPD~Kt~k~HfESKHPK~   73 (110)
                      |---|+|++|--......+|+.|....|-++
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            4467999999999999999999999888654