Citrus Sinensis ID: 033978

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
Protein Sequence
MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
maknvaqsplertslASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA
Flexible Loop (DISEMBL)
maknvaqsplertslASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA
Low Complexity Region (SEG)
MAKNVAQSPLERTSLASLDHKLAMAKRCSHEgviagakaavvatvataiPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA
Disordered region (IsUnstruct)
*********************LAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLAT**************
Disordered Region (DISOPRED)
**************************RCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLAT**************
Disordered Region (DISEMBL)
**********ERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKN**********
Disordered Region (DISPRO)
**************LASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQ******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	107	2.2.26 [Sep-21-2011]
Q02921	105	Early nodulin-93 OS=Glyci	no	no	0.981	1.0	0.850	3e-36

>sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max PE=2 SV=1

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/107 (85%), Positives = 94/107 (87%), Gaps = 2/107 (1%)

Query: 1   MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPW 60
           MAK    SPLER SLASLD KLA AKRCSHEGV+AGAKAAVVA+VA+AIPTLASVRMLPW
Sbjct: 1   MAK--GNSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPW 58

Query: 61  ARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 107
           ARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct: 59  ARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.121    0.328 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,785,867
Number of Sequences: 539616
Number of extensions: 698751
Number of successful extensions: 2103
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2100
Number of HSP's gapped (non-prelim): 7
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
224078557	109	predicted protein [Populus trichocarpa]	0.981	0.963	0.858	3e-44
125630795	109	early nodulin 93 protein [Populus alba x	0.981	0.963	0.858	5e-44
388513645	107	unknown [Lotus japonicus]	0.953	0.953	0.834	1e-41
255566943	108	Early nodulin, putative [Ricinus communi	1.0	0.990	0.879	1e-39
356511650	106	PREDICTED: early nodulin-93-like [Glycin	0.943	0.952	0.815	4e-37
356511652	107	PREDICTED: early nodulin-93-like [Glycin	0.953	0.953	0.873	4e-37
357477959	107	Early nodulin 93 protein [Medicago trunc	0.953	0.953	0.864	2e-36
358249156	107	uncharacterized protein LOC100820292 [Gl	0.953	0.953	0.854	3e-36
351727335	105	early nodulin-93 [Glycine max] gi|730165	0.981	1.0	0.850	1e-34
225445432	107	PREDICTED: early nodulin-93 [Vitis vinif	0.943	0.943	0.831	2e-34

>gi|224078557|ref|XP_002305557.1| predicted protein [Populus trichocarpa] gi|118486142|gb|ABK94914.1| unknown [Populus trichocarpa] gi|222848521|gb|EEE86068.1| predicted protein [Populus trichocarpa]

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 91/106 (85%), Positives = 100/106 (94%), Gaps = 1/106 (0%)

Query: 3   KNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWAR 62
           K VA+SPL+R SLASLD KLAMAKRCSHEGV+AGAKAAV+AT+ATAIPT+AS RMLPWAR
Sbjct: 4   KVVAESPLQRNSLASLDQKLAMAKRCSHEGVVAGAKAAVLATIATAIPTMASARMLPWAR 63

Query: 63  ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQ-ASNMEA 107
           ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSF+  +SN+EA
Sbjct: 64  ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFKSPSSNIEA 109

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125630795|gb|ABN47005.1| early nodulin 93 protein [Populus alba x Populus tremula var. glandulosa]

 Score =  181 bits (459), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 91/106 (85%), Positives = 99/106 (93%), Gaps = 1/106 (0%)

Query: 3   KNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWAR 62
           K VA+SPL+R SLASLD KLAMAKRCSHEGV+AGAKAAV+AT+ATAIPT+AS RMLPWAR
Sbjct: 4   KVVAESPLQRNSLASLDQKLAMAKRCSHEGVVAGAKAAVLATIATAIPTMASARMLPWAR 63

Query: 63  ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQA-SNMEA 107
           ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSF+   SN+EA
Sbjct: 64  ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFKSPRSNIEA 109

Source: Populus alba x Populus tremula var. glandulosa

Species: Populus alba x Populus glandulosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388513645|gb|AFK44884.1| unknown [Lotus japonicus]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/103 (83%), Positives = 95/103 (92%), Gaps = 1/103 (0%)

Query: 3   KNV-AQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWA 61
           +NV A  PLERTSL SLD +LA+AKRCSHEGV+AGA+AAVVA++ATAIPTL SVRMLPWA
Sbjct: 4   RNVSANYPLERTSLPSLDQRLAIAKRCSHEGVMAGARAAVVASIATAIPTLTSVRMLPWA 63

Query: 62  RANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASN 104
           RANLNHTAQAL+ISTVAGAAYFIVADKTVLATARKNSF+  SN
Sbjct: 64  RANLNHTAQALLISTVAGAAYFIVADKTVLATARKNSFKPPSN 106

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566943|ref|XP_002524454.1| Early nodulin, putative [Ricinus communis] gi|223536242|gb|EEF37894.1| Early nodulin, putative [Ricinus communis]

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 103/108 (95%), Gaps = 1/108 (0%)

Query: 1   MAKNVAQSPLERT-SLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLP 59
           MAKNVAQSPLE+T S+ASLD KLAMAKRCSHEGV+AGAKAAVVA++ATAIPTLAS RMLP
Sbjct: 1   MAKNVAQSPLEKTCSMASLDQKLAMAKRCSHEGVVAGAKAAVVASIATAIPTLASARMLP 60

Query: 60  WARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 107
           WARANLNHTAQALIISTVAGAAYFIVADKTVLATAR+NSF+Q  N+EA
Sbjct: 61  WARANLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNIEA 108

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511650|ref|XP_003524536.1| PREDICTED: early nodulin-93-like [Glycine max]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 89/103 (86%), Gaps = 2/103 (1%)

Query: 3   KNVA-QSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWA 61
           +NVA  S  E TSLASL  KLAMAKRCS +GV+AGAK AV A++ATAIPTLASVRMLPWA
Sbjct: 4   RNVAANSSFETTSLASLHQKLAMAKRCS-QGVMAGAKTAVAASIATAIPTLASVRMLPWA 62

Query: 62  RANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASN 104
           RANLNHTAQALIISTV GAAYFI ADKTVLATARKNSF Q SN
Sbjct: 63  RANLNHTAQALIISTVTGAAYFIEADKTVLATARKNSFNQPSN 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511652|ref|XP_003524537.1| PREDICTED: early nodulin-93-like [Glycine max]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/103 (87%), Positives = 95/103 (92%), Gaps = 1/103 (0%)

Query: 3   KNV-AQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWA 61
           +NV A S  ERTSL SLD KLAMAKRCSHEGV+AGAKAAVVAT+ATAIPTLASVRMLPWA
Sbjct: 4   RNVTANSSFERTSLPSLDQKLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWA 63

Query: 62  RANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASN 104
           RANLNH+AQALIISTVAGAAYFIVADKTVLATARKNSF + SN
Sbjct: 64  RANLNHSAQALIISTVAGAAYFIVADKTVLATARKNSFNRPSN 106

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477959|ref|XP_003609265.1| Early nodulin 93 protein [Medicago truncatula] gi|355510320|gb|AES91462.1| Early nodulin 93 protein [Medicago truncatula] gi|388522023|gb|AFK49073.1| unknown [Medicago truncatula]

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/103 (86%), Positives = 95/103 (92%), Gaps = 1/103 (0%)

Query: 3   KNVA-QSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWA 61
           +NVA  SPLERTSLA LD +LAMAKRCSHEGV+AGAKAAVVAT+ATAIPTLASVRMLPWA
Sbjct: 4   RNVAANSPLERTSLAYLDQRLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWA 63

Query: 62  RANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASN 104
           RANLN TAQALIISTVAGAAYF+VADKTVLATARKNS  + SN
Sbjct: 64  RANLNPTAQALIISTVAGAAYFVVADKTVLATARKNSINRPSN 106

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249156|ref|NP_001240002.1| uncharacterized protein LOC100820292 [Glycine max] gi|255640544|gb|ACU20557.1| unknown [Glycine max]

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/103 (85%), Positives = 95/103 (92%), Gaps = 1/103 (0%)

Query: 3   KNVA-QSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWA 61
           +NVA  S  ER++LASLD KLAMAKRCSHEGV+AGAKAAVVAT+ATAIPTLASVRMLPWA
Sbjct: 4   RNVAANSSFERSTLASLDQKLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWA 63

Query: 62  RANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASN 104
           +ANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSF   +N
Sbjct: 64  KANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFNPPTN 106

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727335|ref|NP_001237669.1| early nodulin-93 [Glycine max] gi|730165|sp|Q02921.1|NO93_SOYBN RecName: Full=Early nodulin-93; Short=N-93 gi|218262|dbj|BAA02724.1| early nodulin [Glycine max] gi|3763851|dbj|BAA33816.1| early nodulin [Glycine max] gi|447138|prf||1913422D nodulin

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/107 (85%), Positives = 94/107 (87%), Gaps = 2/107 (1%)

Query: 1   MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPW 60
           MAK    SPLER SLASLD KLA AKRCSHEGV+AGAKAAVVA+VA+AIPTLASVRMLPW
Sbjct: 1   MAK--GNSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPW 58

Query: 61  ARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 107
           ARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct: 59  ARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445432|ref|XP_002285052.1| PREDICTED: early nodulin-93 [Vitis vinifera] gi|297738920|emb|CBI28165.3| unnamed protein product [Vitis vinifera]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/101 (83%), Positives = 93/101 (92%)

Query: 1   MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPW 60
           MAKNVA SPLER  LAS D KLAMAKRCSHEGV+AGAKAAVVA++ATAIPT+AS R LPW
Sbjct: 1   MAKNVAGSPLERNGLASFDQKLAMAKRCSHEGVVAGAKAAVVASIATAIPTMASARWLPW 60

Query: 61  ARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQ 101
           A+ANLNHTAQALIISTVAGAAYFIVADKTVLA+AR+NS ++
Sbjct: 61  AKANLNHTAQALIISTVAGAAYFIVADKTVLASARRNSLKK 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
TAIR|locus:2180632	115	AT5G25940 "AT5G25940" [Arabido	0.859	0.8	0.414	1.3e-13

TAIR|locus:2180632 AT5G25940 "AT5G25940" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 39/94 (41%), Positives = 54/94 (57%)

Query:    15 LASLDH--KLAMAKRCSHEXXXXXXXXXXXXXXXXXXPTLASVRMLPWARANLNHTAQAL 72
             +AS D   K+  A+                       PT+A+VRM PWA+ANLN+TAQAL
Sbjct:    18 IASPDEIAKIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPWAKANLNYTAQAL 77

Query:    73 IISTVAGAAYFIVADKTVLATARKNSFQQASNME 106
             IIS+ + AA+FI ADKT+L  AR+N+  Q   ++
Sbjct:    78 IISSASIAAFFITADKTILQGARRNTEAQLKKVQ 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.121   0.333    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      107        89   0.00091  102 3  10 22  0.41    29
                                                     29  0.50    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.29u 0.12s 9.41t   Elapsed:  00:00:01
  Total cpu time:  9.29u 0.12s 9.41t   Elapsed:  00:00:01
  Start:  Fri May 10 10:14:05 2013   End:  Fri May 10 10:14:06 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q02921	NO93_SOYBN	No assigned EC number	0.8504	0.9813	1.0	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

1st Layer

is NOT an Enzyme protein

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_IV0578 SubName- Full=Putative uncharacterized protein; (109 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	107
pfam03386	79	pfam03386, ENOD93, Early nodulin 93 ENOD93 protein	9e-31

>gnl|CDD|146167 pfam03386, ENOD93, Early nodulin 93 ENOD93 protein

 Score =  103 bits (259), Expect = 9e-31
 Identities = 66/78 (84%), Positives = 70/78 (89%)

Query: 21 KLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGA 80
          KLA AKRCSHE VIAGAKAA VATVA+A+PTLASVRMLPWA+ANLN TAQALIIST AG 
Sbjct: 2  KLARAKRCSHEAVIAGAKAAAVATVASAVPTLASVRMLPWAKANLNPTAQALIISTAAGM 61

Query: 81 AYFIVADKTVLATARKNS 98
          AYFI ADKT+LA ARKNS
Sbjct: 62 AYFIAADKTILALARKNS 79

Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	107
PF03386	79	ENOD93: Early nodulin 93 ENOD93 protein; InterPro:	100.0

>PF03386 ENOD93: Early nodulin 93 ENOD93 protein; InterPro: IPR005050 The expression of early nodulin (ENOD) genes has been well characterised in several legume species

Probab=100.00  E-value=9.8e-51  Score=280.16  Aligned_cols=79  Identities=85%  Similarity=1.110  Sum_probs=78.2

Q ss_pred             HHHHHHhhhhHHHHHhhHHHHHHHHHHhhcchhhhhhhhhhhhhccCcchhhHHhhhcccceeeeeehhhHHHHHhhhh
Q 033978           20 HKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNS   98 (107)
Q Consensus        20 qkla~ak~cs~Egv~AG~KaA~va~vasAiPTLasvRm~PWakANlN~TaQALIIs~aa~aayFI~ADKtIL~~aRkns   98 (107)
                      ||++++|+|||||+++|+|+|+|++++|+||||+||||+||+|+||||||||||||+++||+|||++|||||+|+||||
T Consensus         1 Qk~~~a~~cs~Egv~AG~KaA~va~vasAiptl~svR~~pWakanln~t~qAliIs~aa~~ayFI~aDKtIL~~aR~~s   79 (79)
T PF03386_consen    1 QKLAMAKRCSQEGVRAGAKAAAVATVASAIPTLASVRMLPWAKANLNYTAQALIISAAAGAAYFIVADKTILECARKNS   79 (79)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHhhccchhheeeeeHHHHhcCCcccceeeeeehhhheeeeeccHHHHHHhhccC
Confidence            7999999999999999999999999999999999999999999999999999999999999999999999999999997

Based on their biochemical attributes and expression patterns, they are postulated to have roles in cell structure, in the control of nodule ontogeny by the degradation of Nod factor, and in carbon metabolism [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00