Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value
Query 100
PLN02814
504
PLN02814, PLN02814, beta-glucosidase
3e-12
TIGR03356
426
TIGR03356, BGL, beta-galactosidase
5e-12
pfam00232
454
pfam00232, Glyco_hydro_1, Glycosyl hydrolase famil
3e-11
PLN02849
503
PLN02849, PLN02849, beta-glucosidase
2e-10
PLN02998
497
PLN02998, PLN02998, beta-glucosidase
3e-10
COG2723
460
COG2723, BglB, Beta-glucosidase/6-phospho-beta-glu
4e-10
PRK13511
469
PRK13511, PRK13511, 6-phospho-beta-galactosidase;
6e-09
TIGR01233
467
TIGR01233, lacG, 6-phospho-beta-galactosidase
1e-04
>gnl|CDD|215435 PLN02814, PLN02814, beta-glucosidase
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Score = 60.3 bits (146), Expect = 3e-12
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 25 FQNLFVCYLITSSICLSSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVW 84
F L + +I + TRN FP +FLFG A+SAYQ+EGA GR SVW
Sbjct: 4 FSLLSIFLVIVLATSYID------AFTRNDFPEDFLFGAATSAYQWEGAVDEDGRTPSVW 57
Query: 85 DTFA 88
DT +
Sbjct: 58 DTTS 61
>gnl|CDD|234180 TIGR03356, BGL, beta-galactosidase
Back Show alignment and domain information
Score = 59.9 bits (146), Expect = 5e-12
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 56 PPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
P +FL+G A+++YQ EGA + GR S+WDTF+ PG
Sbjct: 1 PKDFLWGVATASYQIEGAVNEDGRGPSIWDTFS-HTPG 37
>gnl|CDD|215809 pfam00232, Glyco_hydro_1, Glycosyl hydrolase family 1
Back Show alignment and domain information
Score = 57.7 bits (140), Expect = 3e-11
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP +FL+G A++AYQ EGA + G+ S+WDTF
Sbjct: 1 MSKTFPEDFLWGAATAAYQIEGAWNEDGKGPSIWDTFC 38
>gnl|CDD|215455 PLN02849, PLN02849, beta-glucosidase
Back Show alignment and domain information
Score = 55.4 bits (133), Expect = 2e-10
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 28 LFVCYLITSSICLSSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
+F+ ++S C S +R+ FP F+FG +SAYQ+EGA GRK SVWDTF
Sbjct: 10 IFLLLALSSGKCSSDY-------SRSDFPEGFVFGAGTSAYQWEGAFDEDGRKPSVWDTF 62
>gnl|CDD|215539 PLN02998, PLN02998, beta-glucosidase
Back Show alignment and domain information
Score = 55.1 bits (132), Expect = 3e-10
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+RN FPP F+FG+ +SAYQ EGAA GR S+WD FA
Sbjct: 27 SRNDFPPGFVFGSGTSAYQVEGAADEDGRTPSIWDVFA 64
>gnl|CDD|225343 COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]
Back Show alignment and domain information
Score = 54.6 bits (132), Expect = 4e-10
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP +FL+G A++A+Q EGA + G+ S WD +
Sbjct: 1 MLKFPKDFLWGGATAAFQVEGAWNEDGKGPSDWDVW 36
>gnl|CDD|184102 PRK13511, PRK13511, 6-phospho-beta-galactosidase; Provisional
Back Show alignment and domain information
Score = 51.2 bits (123), Expect = 6e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQ 91
+ P +F+FG A++AYQ EGA G+ WD + +
Sbjct: 3 KTLPKDFIFGGATAAYQAEGATKTDGKGPVAWDKYLEEN 41
>gnl|CDD|130300 TIGR01233, lacG, 6-phospho-beta-galactosidase
Back Show alignment and domain information
Score = 38.9 bits (90), Expect = 1e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
P +F+FG A++AYQ EGA H G+ WD + ++
Sbjct: 4 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKY-LEDNY 41
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 467
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
100
KOG0626
524
consensus Beta-glucosidase, lactase phlorizinhydro
99.56
PLN02849
503
beta-glucosidase
99.46
PF00232
455
Glyco_hydro_1: Glycosyl hydrolase family 1; InterP
99.43
PRK15014
477
6-phospho-beta-glucosidase BglA; Provisional
99.39
PLN02998
497
beta-glucosidase
99.36
PRK09852
474
cryptic 6-phospho-beta-glucosidase; Provisional
99.35
PRK09589
476
celA 6-phospho-beta-glucosidase; Reviewed
99.35
PRK13511
469
6-phospho-beta-galactosidase; Provisional
99.34
PLN02814
504
beta-glucosidase
99.33
PRK09593
478
arb 6-phospho-beta-glucosidase; Reviewed
99.33
TIGR03356
427
BGL beta-galactosidase.
99.32
TIGR01233
467
lacG 6-phospho-beta-galactosidase. This enzyme is
99.3
COG2723
460
BglB Beta-glucosidase/6-phospho-beta-glucosidase/b
99.28
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
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Probab=99.56 E-value=2.7e-15 Score=126.62 Aligned_cols=56 Identities=52% Similarity=0.796 Sum_probs=48.2
Q ss_pred ccCCCCCCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCC
Q 034239 43 VCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLS 98 (100)
Q Consensus 43 ~~~~~~~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~ 98 (100)
.|.....+.+..||++|+||+||||||+||+++++|||+++||++.|+.|+++.|.
T Consensus 25 ~~~~~~~~~r~~FP~~F~FGtAtSAyQ~EGA~~e~gRg~svWD~f~~~~p~~~~~~ 80 (524)
T KOG0626|consen 25 VCPKTTKFSRADFPKGFLFGTATSAYQVEGAANEDGRGPSVWDTFTHKYPGKICDG 80 (524)
T ss_pred cCcccCcccccCCCCCceeeccchHHHhhhhhccCCCCCchhhhhhccCCcccccC
Confidence 34444456788899999999999999999999999999999999999899765554
>PLN02849 beta-glucosidase
Back Show alignment and domain information
Probab=99.46 E-value=2.9e-14 Score=119.32 Aligned_cols=58 Identities=43% Similarity=0.737 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhhhcccCCCCCCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhh
Q 034239 28 LFVCYLITSSICLSSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAM 89 (100)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~ 89 (100)
++-.+||++..|..+ ...+.+.+||++|+||+||||||+||+++++|||+|+||++.+
T Consensus 7 ~~~~~~~~~~~~~~~----~~~~~~~~FP~dFlwG~AtsA~QiEGa~~~~Gkg~SiwD~~~~ 64 (503)
T PLN02849 7 LFTIFLLLALSSGKC----SSDYSRSDFPEGFVFGAGTSAYQWEGAFDEDGRKPSVWDTFLH 64 (503)
T ss_pred HHHHHHHHhcccccc----cCCCccccCCCCCEEEeechhhhhcCCcCCCCCcCcceeeeec
Confidence 444455555544222 3446677899999999999999999999999999999999887
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3
Back Show alignment and domain information
Probab=99.43 E-value=3.8e-14 Score=116.02 Aligned_cols=46 Identities=46% Similarity=0.817 Sum_probs=37.7
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||++|+||+||||+|+||++.+||||+|+||.+.+ .|+++.++.
T Consensus 3 ~~fp~~F~wG~atsa~Q~EG~~~~dGkg~s~wd~~~~-~~~~~~~~~ 48 (455)
T PF00232_consen 3 KKFPEDFLWGVATSAYQIEGAWNEDGKGPSIWDTFCH-EPGKVEDGS 48 (455)
T ss_dssp GGS-TT-EEEEE--HHHHSSSTTSTTSTTBHHHHHHH-STTSSTTSS
T ss_pred CCCCCCCeEEEeceeccccceecCCCCCccccccccc-ccceeeccc
Confidence 4699999999999999999999999999999999999 577776653
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
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Probab=99.39 E-value=1.2e-13 Score=114.84 Aligned_cols=44 Identities=32% Similarity=0.559 Sum_probs=38.4
Q ss_pred CCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhh---hcCCCCc
Q 034239 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA---MDQPGDQ 95 (100)
Q Consensus 52 ~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~---~~~p~~i 95 (100)
+.+||++|+||+||||||+||+++++|||+|+||++. +..|+++
T Consensus 3 ~~~FP~~FlwG~AtsA~QiEGa~~e~Gkg~siwD~~~~~~~~~~~~~ 49 (477)
T PRK15014 3 KLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREI 49 (477)
T ss_pred cCCCCCCCEEeeecHHHHhCCCcCCCCCcccHhhccccccccCcccc
Confidence 4569999999999999999999999999999999988 4345544
>PLN02998 beta-glucosidase
Back Show alignment and domain information
Probab=99.36 E-value=2.2e-13 Score=113.89 Aligned_cols=41 Identities=56% Similarity=1.010 Sum_probs=38.0
Q ss_pred CCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhh
Q 034239 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAM 89 (100)
Q Consensus 49 ~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~ 89 (100)
.+.+..||++|+||+||||||+||+++++|||+|+||.+.+
T Consensus 25 ~~~~~~FP~~FlwG~AtSA~QvEGa~~~~Gkg~siwD~~~~ 65 (497)
T PLN02998 25 KYSRNDFPPGFVFGSGTSAYQVEGAADEDGRTPSIWDVFAH 65 (497)
T ss_pred cCccccCCCCCEEeeechHHHhCCCcCCCCCccchhhcccc
Confidence 35567799999999999999999999999999999999887
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Back Show alignment and domain information
Probab=99.35 E-value=2.6e-13 Score=112.86 Aligned_cols=41 Identities=34% Similarity=0.450 Sum_probs=37.6
Q ss_pred CCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 54 ~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
+||++|+||+||||||+||+++++|||+|+||++.+ .|+++
T Consensus 3 ~FP~~FlwG~AtsA~QiEGa~~~~Gkg~siwD~~~~-~~~~~ 43 (474)
T PRK09852 3 VFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPH-GEHRM 43 (474)
T ss_pred CCCCCCEEeccchHhhcCCCcCCCCCCCchhhcccc-CCCcc
Confidence 599999999999999999999999999999999887 46654
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Back Show alignment and domain information
Probab=99.35 E-value=3.1e-13 Score=112.27 Aligned_cols=42 Identities=36% Similarity=0.497 Sum_probs=37.3
Q ss_pred CCCCCcchhhhhhhhhhcccccCCCCccchhhhhh---hcCCCCc
Q 034239 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA---MDQPGDQ 95 (100)
Q Consensus 54 ~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~---~~~p~~i 95 (100)
+||++|+||+||||||+||+++++|||+|+||++. ++.|+++
T Consensus 3 ~fP~~FlwG~AtsA~QiEGa~~~~gkg~siwD~~~~~~~~~~~~~ 47 (476)
T PRK09589 3 GFKKGFLWGGAVAAHQLEGGWNEGGKGISVADVMTAGAHGVPREI 47 (476)
T ss_pred CCCCCCEEeeechHhhhcCCcCCCCCCCchhcccccccccCcccc
Confidence 59999999999999999999999999999999988 4345544
>PRK13511 6-phospho-beta-galactosidase; Provisional
Back Show alignment and domain information
Probab=99.34 E-value=3.1e-13 Score=111.80 Aligned_cols=42 Identities=33% Similarity=0.648 Sum_probs=37.9
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
..||++|+||+||||||+||++.+||||+|+||++.+ .|+++
T Consensus 3 ~~fP~~FlwG~Atsa~QiEG~~~~~Gkg~siwD~~~~-~~~~~ 44 (469)
T PRK13511 3 KTLPKDFIFGGATAAYQAEGATKTDGKGPVAWDKYLE-ENYWF 44 (469)
T ss_pred CCCCCCCEEEeechHhhhcCCcCCCCCccchhhcccc-cCCCC
Confidence 4599999999999999999999999999999999987 55543
>PLN02814 beta-glucosidase
Back Show alignment and domain information
Probab=99.33 E-value=1.9e-13 Score=114.47 Aligned_cols=41 Identities=59% Similarity=0.944 Sum_probs=37.6
Q ss_pred CCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhc
Q 034239 50 STRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90 (100)
Q Consensus 50 ~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~ 90 (100)
+.+.+||++|+||+||||||+||+++++|||+|+||++.+.
T Consensus 23 ~~~~~fP~~FlwG~AtaA~QiEGa~~~~gkg~siwD~~~~~ 63 (504)
T PLN02814 23 FTRNDFPEDFLFGAATSAYQWEGAVDEDGRTPSVWDTTSHC 63 (504)
T ss_pred cccccCCCCCEEeeechhhhhcCCcCCCCCccchhheeeec
Confidence 44567999999999999999999999999999999998863
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Back Show alignment and domain information
Probab=99.33 E-value=4.1e-13 Score=111.61 Aligned_cols=42 Identities=33% Similarity=0.494 Sum_probs=37.4
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
.+||++|+||+||||||+||++.+||||+|+||++.+ .|+++
T Consensus 4 ~~fP~~FlwG~AtsA~QiEGa~~~~Gkg~siwD~~~~-~~~~~ 45 (478)
T PRK09593 4 MPFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPI-GEDRF 45 (478)
T ss_pred ccCCCCCEEeeechHHHhCCCcCCCCCccchhhcccc-CcCcc
Confidence 4599999999999999999999999999999999887 44443
>TIGR03356 BGL beta-galactosidase
Back Show alignment and domain information
Probab=99.32 E-value=5.1e-13 Score=109.29 Aligned_cols=43 Identities=47% Similarity=0.885 Sum_probs=38.4
Q ss_pred CCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCC
Q 034239 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLS 98 (100)
Q Consensus 55 FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~ 98 (100)
||++|+||+||||+|+||+++++|||+|+||++.+ .|+++.++
T Consensus 1 fp~~FlwG~atsa~Q~EG~~~~~gkg~s~wd~~~~-~~~~~~~~ 43 (427)
T TIGR03356 1 FPKDFLWGVATASYQIEGAVNEDGRGPSIWDTFSH-TPGKVKDG 43 (427)
T ss_pred CCCCCEEeeechHHhhCCCcCCCCCccchhheecc-CCCcccCC
Confidence 79999999999999999999999999999999887 56665443
>TIGR01233 lacG 6-phospho-beta-galactosidase
Back Show alignment and domain information
Probab=99.30 E-value=9.2e-13 Score=109.16 Aligned_cols=41 Identities=37% Similarity=0.722 Sum_probs=37.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~ 94 (100)
.+||++|+||+||||+|+||++.++|||+|+||++.+ .|++
T Consensus 2 ~~fP~~FlwG~AtsA~QvEG~~~~~Gkg~siwD~~~~-~~~~ 42 (467)
T TIGR01233 2 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYW 42 (467)
T ss_pred CCCCCCCEEeeechhhhcCCCcCCCCCcCchhhcccc-CCCC
Confidence 3599999999999999999999999999999999886 4554
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Back Show alignment and domain information
Probab=99.28 E-value=1.1e-12 Score=109.69 Aligned_cols=45 Identities=40% Similarity=0.742 Sum_probs=39.9
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcC-CCCccC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQ-PGDQFL 97 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~-p~~i~d 97 (100)
.+||++|+||+||||+|+||++++||||+|+||.+.+.. |+++..
T Consensus 2 ~~FPkdFlWG~AtAa~Q~EGa~~~dGkg~s~wD~~~~~~~~~~~~~ 47 (460)
T COG2723 2 LKFPKDFLWGGATAAFQVEGAWNEDGKGPSDWDVWVHDEIPGRLVS 47 (460)
T ss_pred CCCCCCCeeecccccccccCCcCCCCCCCeeeeeeeccccCCcccC
Confidence 469999999999999999999999999999999999854 555543
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value
Query
100
d1cbga_
490
c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {
3e-16
d1v02a_
484
c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {
9e-16
d1qoxa_
449
c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulan
5e-15
d1wcga1
462
c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (
1e-14
d1pbga_
468
c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL
3e-14
d1e4ia_
447
c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa
1e-13
d1gnxa_
464
c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp.
1e-13
d1uwsa_
489
c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus
2e-13
d1e4mm_
499
c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {
2e-13
d1qvba_
481
c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermospha
2e-13
d2j78a1
443
c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga m
4e-13
d1ug6a_
426
c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophi
5e-11
d1vffa1
423
c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyr
2e-06
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Length = 490
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Score = 70.2 bits (171), Expect = 3e-16
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
R+ F P F+FGTASSA+QYEGAA G+ S+WDTF P
Sbjct: 15 NRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPE 57
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Length = 484
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: Sorghum bicolor [TaxId: 4558]
Score = 68.7 bits (167), Expect = 9e-16
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
R+ FPP FLFG A+SAYQ EGA + G+ S WD F + P
Sbjct: 10 RDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPE 51
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Length = 449
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Score = 66.7 bits (162), Expect = 5e-15
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+ + FP +F +G A++AYQ EGA + GR S+WDTFA
Sbjct: 1 SIHMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFA 38
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Length = 462
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Thioglucosidase
species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Score = 65.6 bits (159), Expect = 1e-14
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
FP +F+FGT++++YQ EG + G+ ++WD P
Sbjct: 2 KFPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPE 41
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Length = 468
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: 6-phospho-beta-D-galactosidase, PGAL
species: Lactococcus lactis [TaxId: 1358]
Score = 64.5 bits (156), Expect = 3e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
+ P +F+FG A++AYQ EGA H G+ WD + D
Sbjct: 4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY 44
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Length = 447
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Bacillus polymyxa [TaxId: 1406]
Score = 62.9 bits (152), Expect = 1e-13
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
FP +F++GTA++AYQ EGA GR S+WDTFA
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFA 38
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Length = 464
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Streptomyces sp. [TaxId: 1931]
Score = 62.5 bits (151), Expect = 1e-13
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP FL+G+A+++YQ EGAA GR S+WDT+A
Sbjct: 3 TFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYA 37
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 489
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: beta-Glycosidase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 62.2 bits (150), Expect = 2e-13
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
SFP F FG + + +Q E + W + D
Sbjct: 3 SFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPEN 42
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Length = 499
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: White mustard (Sinapis alba) [TaxId: 3728]
Score = 62.1 bits (150), Expect = 2e-13
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+SF +F+FG ASSAYQ EG GR ++WD F P
Sbjct: 19 NSSSFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPN 58
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Length = 481
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: beta-Glycosidase
species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Score = 62.1 bits (150), Expect = 2e-13
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
FP +F+ G +SS +Q+E S W + D
Sbjct: 2 KFPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPEN 41
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Length = 443
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Thermotoga maritima [TaxId: 2336]
Score = 61.3 bits (148), Expect = 4e-13
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
FP FL+G A+++YQ EG+ G S+W TF+
Sbjct: 4 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFS 37
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Length = 426
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Thermus thermophilus [TaxId: 274]
Score = 55.2 bits (132), Expect = 5e-11
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 59 FLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
FL+G A+SAYQ EGA GR S+WD FA
Sbjct: 5 FLWGVATSAYQIEGATQEDGRGPSIWDAFA 34
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 423
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 42.2 bits (98), Expect = 2e-06
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDT 86
FP FLFGTA+S++Q EG R W
Sbjct: 4 KFPEMFLFGTATSSHQIEG----NNRWNDWWYY 32
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 100
d1v02a_
484
Plant beta-glucosidase (myrosinase) {Sorghum bicol
99.56
d1cbga_
490
Plant beta-glucosidase (myrosinase) {Creeping whit
99.54
d1wcga1
462
Thioglucosidase {Cabbage aphid (Brevicoryne brassi
99.53
d1e4ia_
447
Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406
99.52
d1qoxa_
449
Beta-glucosidase A {Bacillus circulans, subsp. alk
99.52
d1gnxa_
464
Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]
99.5
d2j78a1
443
Beta-glucosidase A {Thermotoga maritima [TaxId: 23
99.49
d1pbga_
468
6-phospho-beta-D-galactosidase, PGAL {Lactococcus
99.42
d1e4mm_
499
Plant beta-glucosidase (myrosinase) {White mustard
99.36
d1ug6a_
426
Beta-glucosidase A {Thermus thermophilus [TaxId: 2
99.34
d1qvba_
481
beta-Glycosidase {Archaeon Thermosphaera aggregans
99.27
d1uwsa_
489
beta-Glycosidase {Archaeon Sulfolobus solfataricus
99.25
d1vffa1
423
Beta-glucosidase A {Archaeon Pyrococcus horikoshii
98.34
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]}
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: Sorghum bicolor [TaxId: 4558]
Probab=99.56 E-value=2.8e-16 Score=125.08 Aligned_cols=51 Identities=45% Similarity=0.726 Sum_probs=45.3
Q ss_pred CCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCCC
Q 034239 50 STRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100 (100)
Q Consensus 50 ~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~~ 100 (100)
..+..||+||+||+||||||+||++++||||+|+||.|+|+.|+++.++++
T Consensus 8 ~~~~~FP~~FlwG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~~~~~~~~~ 58 (484)
T d1v02a_ 8 PRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSN 58 (484)
T ss_dssp CCGGGSCTTCEEEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGGGSTTSCC
T ss_pred CccccCCCCCeEeEEchHHHhCcCcCCCCCCccHHHHhhccCCCcccCCCC
Confidence 345569999999999999999999999999999999999977888876653
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.54 E-value=5.5e-16 Score=123.52 Aligned_cols=51 Identities=47% Similarity=0.767 Sum_probs=45.8
Q ss_pred CCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 49 ~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+++.+||+||+||+||||||+||++++||||+|+||++.++.|+++.++.
T Consensus 13 ~~~~~~FP~~F~wG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~~~~~~~~ 63 (490)
T d1cbga_ 13 DLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRT 63 (490)
T ss_dssp GSSGGGSCTTCEEEEECCHHHHCCCSSSTTCCCBHHHHHHHHCGGGSTTCC
T ss_pred cCccccCCCCCeEeeEChHHHhcCCcCCCCCccchhhhhhccCCcccCCCC
Confidence 455667999999999999999999999999999999999998888887654
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Thioglucosidase
species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.53 E-value=7e-16 Score=121.96 Aligned_cols=47 Identities=30% Similarity=0.632 Sum_probs=43.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||+||+||+||||||+||++++|||++|+||.|.|+.|+++.++.
T Consensus 1 ~~FP~~FlwG~atsa~Q~EG~~~~dg~~~s~wd~~~~~~~~~~~~~~ 47 (462)
T d1wcga1 1 YKFPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGT 47 (462)
T ss_dssp CCCCTTCEEEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGGGSTTSC
T ss_pred CcCCCCCEEeEEchHHHhcCCcCCCCCcccHHHHhhhcCCCcccCCC
Confidence 47999999999999999999999999999999999997788877654
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Bacillus polymyxa [TaxId: 1406]
Probab=99.52 E-value=5e-16 Score=122.56 Aligned_cols=47 Identities=49% Similarity=0.852 Sum_probs=43.0
Q ss_pred CCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 52 ~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
+++||+||+||+||||||+||+++++|||+|+||+|.| .|+++.+++
T Consensus 2 ~~~FP~~F~wG~atsa~Q~EG~~~~~g~~~s~wd~~~~-~~~~~~~~~ 48 (447)
T d1e4ia_ 2 IFQFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAH-TPGKVFNGD 48 (447)
T ss_dssp EEECCTTCEEEEECCHHHHCCCTTGGGCCCBHHHHHHT-STTTSGGGC
T ss_pred cccCCCCCeEeeechHHHhCCCcCCCCCccchhhhhhc-CCCcccCCC
Confidence 45799999999999999999999999999999999999 688887654
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.52 E-value=7.4e-16 Score=121.60 Aligned_cols=46 Identities=46% Similarity=0.788 Sum_probs=42.1
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||+||+||+||||||+||++++||||+|+||++.| .|+++.+++
T Consensus 3 ~~FP~~F~wG~atsa~Q~EG~~~~~g~g~s~wd~~~~-~~~~~~~~~ 48 (449)
T d1qoxa_ 3 HMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAH-TPGKVKNGD 48 (449)
T ss_dssp EECCTTCEEEEECCHHHHCCCTTSTTCCCBHHHHHHH-STTTSGGGC
T ss_pred cCCCCCCeeeeechHHHhCcCcCCCCCccchhhhhhc-CCCcccCCC
Confidence 4699999999999999999999999999999999999 688877654
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Streptomyces sp. [TaxId: 1931]
Probab=99.50 E-value=1.3e-15 Score=120.66 Aligned_cols=46 Identities=46% Similarity=0.803 Sum_probs=42.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||+||+||+||||||+||++++||||+|+||++.+ .|+++.+++
T Consensus 2 ~~fP~~F~wG~atsa~Q~EG~~~~~gk~~s~wd~~~~-~~~~~~~~~ 47 (464)
T d1gnxa_ 2 LTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYAR-TPGRVRNGD 47 (464)
T ss_dssp EECCTTCEEEEECCHHHHCCCTTSTTCCCBHHHHHHT-STTSSGGGC
T ss_pred CCCCCCCEEeeechHHHhccCcCCCCCcccHhhhhhc-CCCcccCCC
Confidence 4699999999999999999999999999999999998 678877654
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Thermotoga maritima [TaxId: 2336]
Probab=99.49 E-value=1.4e-15 Score=119.20 Aligned_cols=46 Identities=37% Similarity=0.732 Sum_probs=42.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||+||+||+||||||+||++.+||||+|+||++.| .|+++.+++
T Consensus 2 ~~fP~~F~wG~atsa~Q~EG~~~~~g~~~s~wd~~~~-~~~~~~~~~ 47 (443)
T d2j78a1 2 KKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSH-TPGNVKNGD 47 (443)
T ss_dssp EECCTTCEEEEECCHHHHCCCTTGGGCCCBHHHHHHT-STTSSGGGC
T ss_pred CCCCCCCeEeeechHHHhCcCcCCCCCCccHHHHhhc-CCCcccCCC
Confidence 3699999999999999999999999999999999999 688877654
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: 6-phospho-beta-D-galactosidase, PGAL
species: Lactococcus lactis [TaxId: 1358]
Probab=99.42 E-value=1.2e-14 Score=115.12 Aligned_cols=38 Identities=42% Similarity=0.900 Sum_probs=36.2
Q ss_pred CCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcC
Q 034239 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQ 91 (100)
Q Consensus 54 ~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~ 91 (100)
+||++|+||+|||||||||++++||||+|+||++.|+.
T Consensus 4 ~fP~~FlwG~atsa~QiEG~~~~~gkg~s~wd~~~~~~ 41 (468)
T d1pbga_ 4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDN 41 (468)
T ss_dssp ECCTTCEEEEECCHHHHCCCTTSTTCCCBHHHHHHHTT
T ss_pred CCCCCCcEeeEChHHHhcCCcCCCCCccchhheeeccC
Confidence 59999999999999999999999999999999999954
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Plant beta-glucosidase (myrosinase)
species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.36 E-value=3.3e-14 Score=113.48 Aligned_cols=51 Identities=39% Similarity=0.705 Sum_probs=43.8
Q ss_pred hcccCCCCCCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCC
Q 034239 41 SSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94 (100)
Q Consensus 41 ~~~~~~~~~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~ 94 (100)
+..|.+.+.+++.+||+||+||+||||||+||++ |||+|+||.|.|+.|++
T Consensus 9 ~~~~~~~~~~~~~~FP~~FlwG~atsa~Q~EG~~---gkg~s~wd~~~~~~~~~ 59 (499)
T d1e4mm_ 9 PFTCGNTDALNSSSFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPNK 59 (499)
T ss_dssp SCCTTCTTTSCGGGSCTTCEEEEECCHHHHSCST---TSCCBHHHHHHHHSHHH
T ss_pred CCCCcccccccccCCCCCCeEeeechHHHhCCCC---CCCccHHhHHhhhcCCc
Confidence 4456777788889999999999999999999985 89999999999865443
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Thermus thermophilus [TaxId: 274]
Probab=99.34 E-value=1.1e-13 Score=108.09 Aligned_cols=43 Identities=47% Similarity=0.791 Sum_probs=39.6
Q ss_pred CCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCCC
Q 034239 57 PEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100 (100)
Q Consensus 57 ~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~~ 100 (100)
+||+||+||||||+||++.++|||+|+||++.| .|+++.|+++
T Consensus 3 ~dF~wG~atsa~QvEG~~~~~g~~~s~wd~~~~-~~~~~~~~~~ 45 (426)
T d1ug6a_ 3 EKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQ-RPGAIRDGST 45 (426)
T ss_dssp CCCEEEEECCHHHHCCCTTSTTCCCBHHHHHTT-STTSSTTSCC
T ss_pred CCCEEEEEchHHHhcCCcCCCCCCcchhhhhhc-CCCcccCCCC
Confidence 799999999999999999999999999999999 6888887653
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: beta-Glycosidase
species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.27 E-value=1.4e-13 Score=110.16 Aligned_cols=38 Identities=29% Similarity=0.539 Sum_probs=35.9
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~ 90 (100)
.+||++|+||+||||||+||++.++||++|+||+|.|.
T Consensus 1 lkFP~~F~wG~Atsa~QiEG~~~~~g~~~s~wd~~~~~ 38 (481)
T d1qvba_ 1 MKFPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHD 38 (481)
T ss_dssp CBCCTTCEEEEECCHHHHSCCSTTCCCTTBHHHHHHHC
T ss_pred CCCCCCCEEeEechHHHhcCCcCCCCCCCcceeeeecc
Confidence 36999999999999999999999999999999999883
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: beta-Glycosidase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.25 E-value=1.6e-13 Score=110.03 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=36.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~ 90 (100)
.+||++|+||+||||||+||++.++|++.|+||.+.|+
T Consensus 2 ~~FP~~F~wG~Atsa~QiEG~~~~~~~~~s~wd~~~~~ 39 (489)
T d1uwsa_ 2 YSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHD 39 (489)
T ss_dssp EECCTTCEEEEECCHHHHSCSSTTCCCCCBHHHHHHHC
T ss_pred CCCCCCCEEeEEchHHHhccCCCCCCCCCcchhhhhcc
Confidence 46999999999999999999999999999999999984
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Family 1 of glycosyl hydrolase
domain: Beta-glucosidase A
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.34 E-value=3.6e-08 Score=76.84 Aligned_cols=21 Identities=57% Similarity=0.844 Sum_probs=19.6
Q ss_pred CCCCCCcchhhhhhhhhhccc
Q 034239 53 NSFPPEFLFGTASSAYQYEGA 73 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~ 73 (100)
.+||+||+||+||||||+||+
T Consensus 3 ~~FP~~FlwG~Atsa~Q~EG~ 23 (423)
T d1vffa1 3 LKFPEMFLFGTATSSHQIEGN 23 (423)
T ss_dssp EECCTTCEEEEECCSTTTSSC
T ss_pred CCCCCCCEEEEechHhhhCCC
Confidence 369999999999999999996