Citrus Sinensis ID: 034257


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
MNTAYAATFRTAHLQTTLESGTEFERKRGMARSESSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDSKVQVN
ccHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccEEEEcccHHHHHHHHHcccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccc
cccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHccccEEEEccccccHccccccHHHHHHHHHHHHHHHcccccEccc
MNTAYAATFRTAHLQTtlesgteferkrgmarsesspikiilgsSSMARKEILAEMGYEFTVVTAEideksirkdkPEDLVMALAEakkpsgqdskvqvn
mntayaatfrtahlqttlesgteferkrgmarsesspikiilgssSMARKEILAEMGYEFTVVtaeideksirkdkPEDLVMALaeakkpsgqdskvqvn
MNTAYAATFRTAHLQTTLESGTEFERKRGMARSESSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDSKVQVN
***************************************IIL******RKEILAEMGYEFTVVTAEI*********************************
******ATFRTAHLQTTLE*********************ILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSG*D******
MNTAYAATFRTAHLQTTL*****************SPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAE**************
*NTAYAATFRTAHLQTTLESGTEFERKRG*****SSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQD******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNTAYAATFRTAHLQTTLESGTEFERKRGMARSESSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDSKVQVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query100 2.2.26 [Sep-21-2011]
Q54TC5 197 Maf-like protein DDB_G028 yes no 0.49 0.248 0.469 5e-07
Q3JAF4 199 Maf-like protein Noc_1720 yes no 0.59 0.296 0.389 9e-06
Q47VG7 212 Maf-like protein CPS_4557 yes no 0.59 0.278 0.389 7e-05
Q5QZ35 198 Maf-like protein IL1346 O yes no 0.51 0.257 0.450 8e-05
Q1QDI9 226 Maf-like protein Pcryo_04 yes no 0.6 0.265 0.365 0.0001
A5G7S1 194 Maf-like protein Gura_368 yes no 0.5 0.257 0.46 0.0004
Q67SI8 194 Maf-like protein STH370 O yes no 0.47 0.242 0.425 0.0004
Q15ZH0 192 Maf-like protein Patl_018 yes no 0.6 0.312 0.366 0.0004
Q89WP0 202 Maf-like protein blr0638 yes no 0.57 0.282 0.406 0.0005
Q7MHE0 186 Maf-like protein VV2931 O yes no 0.54 0.290 0.370 0.0009
>sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937 OS=Dictyostelium discoideum GN=DDB_G0281937 PE=3 SV=1 Back     alignment and function desciption
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 36/49 (73%)

Query: 40 IILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAK 88
          +ILGSSS+ RK++L +MGY F  ++ +IDEK+IR   P+ L + ++ AK
Sbjct: 6  LILGSSSIWRKQVLIDMGYIFKTMSPDIDEKAIRDSDPKTLTLLISRAK 54





Dictyostelium discoideum (taxid: 44689)
>sp|Q3JAF4|Y1720_NITOC Maf-like protein Noc_1720 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_1720 PE=3 SV=1 Back     alignment and function description
>sp|Q47VG7|Y4557_COLP3 Maf-like protein CPS_4557 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=CPS_4557 PE=3 SV=1 Back     alignment and function description
>sp|Q5QZ35|Y1346_IDILO Maf-like protein IL1346 OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=IL1346 PE=3 SV=1 Back     alignment and function description
>sp|Q1QDI9|Y481_PSYCK Maf-like protein Pcryo_0481 OS=Psychrobacter cryohalolentis (strain K5) GN=Pcryo_0481 PE=3 SV=2 Back     alignment and function description
>sp|A5G7S1|Y3686_GEOUR Maf-like protein Gura_3686 OS=Geobacter uraniireducens (strain Rf4) GN=Gura_3686 PE=3 SV=1 Back     alignment and function description
>sp|Q67SI8|Y370_SYMTH Maf-like protein STH370 OS=Symbiobacterium thermophilum (strain T / IAM 14863) GN=STH370 PE=3 SV=1 Back     alignment and function description
>sp|Q15ZH0|Y186_PSEA6 Maf-like protein Patl_0186 OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=Patl_0186 PE=3 SV=1 Back     alignment and function description
>sp|Q89WP0|Y638_BRAJA Maf-like protein blr0638 OS=Bradyrhizobium japonicum (strain USDA 110) GN=blr0638 PE=3 SV=1 Back     alignment and function description
>sp|Q7MHE0|Y2931_VIBVY Maf-like protein VV2931 OS=Vibrio vulnificus (strain YJ016) GN=VV2931 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
356561237 204 PREDICTED: maf-like protein DDB_G0281937 0.56 0.274 0.767 8e-17
224094787 201 predicted protein [Populus trichocarpa] 0.5 0.248 0.86 1e-16
255538656 242 maf protein, putative [Ricinus communis] 0.58 0.239 0.758 2e-16
356503038 204 PREDICTED: maf-like protein DDB_G0281937 0.56 0.274 0.75 2e-16
427199345 234 maf-like protein [Morella rubra] 0.54 0.230 0.777 5e-16
449457632 205 PREDICTED: maf-like protein DDB_G0281937 0.53 0.258 0.754 9e-16
359476695 204 PREDICTED: maf-like protein DDB_G0281937 0.56 0.274 0.767 1e-15
297825601 206 maf family protein [Arabidopsis lyrata s 0.5 0.242 0.8 2e-15
18650296598 Inosine triphosphate pyrophosphatase-lik 0.5 0.510 0.78 3e-15
217073962158 unknown [Medicago truncatula] gi|3884927 0.56 0.354 0.732 3e-15
>gi|356561237|ref|XP_003548889.1| PREDICTED: maf-like protein DDB_G0281937-like [Glycine max] Back     alignment and taxonomy information
 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/56 (76%), Positives = 52/56 (92%)

Query: 33 SESSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAK 88
          +++ P KIILGSSS AR+EIL+EMGYEFTV+TA+IDEK IR++KPEDLVMALAEAK
Sbjct: 3  TKNPPFKIILGSSSKARREILSEMGYEFTVMTADIDEKCIRREKPEDLVMALAEAK 58




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094787|ref|XP_002310234.1| predicted protein [Populus trichocarpa] gi|222853137|gb|EEE90684.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538656|ref|XP_002510393.1| maf protein, putative [Ricinus communis] gi|223551094|gb|EEF52580.1| maf protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356503038|ref|XP_003520319.1| PREDICTED: maf-like protein DDB_G0281937-like [Glycine max] Back     alignment and taxonomy information
>gi|427199345|gb|AFY26891.1| maf-like protein [Morella rubra] Back     alignment and taxonomy information
>gi|449457632|ref|XP_004146552.1| PREDICTED: maf-like protein DDB_G0281937-like [Cucumis sativus] gi|449500038|ref|XP_004160986.1| PREDICTED: maf-like protein DDB_G0281937-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359476695|ref|XP_003631878.1| PREDICTED: maf-like protein DDB_G0281937 isoform 2 [Vitis vinifera] gi|297735154|emb|CBI17516.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297825601|ref|XP_002880683.1| maf family protein [Arabidopsis lyrata subsp. lyrata] gi|297326522|gb|EFH56942.1| maf family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|186502965|ref|NP_565598.3| Inosine triphosphate pyrophosphatase-like protein [Arabidopsis thaliana] gi|20197754|gb|AAD20709.2| expressed protein [Arabidopsis thaliana] gi|116325952|gb|ABJ98577.1| At2g25500 [Arabidopsis thaliana] gi|330252615|gb|AEC07709.1| Inosine triphosphate pyrophosphatase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|217073962|gb|ACJ85341.1| unknown [Medicago truncatula] gi|388492768|gb|AFK34450.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
TAIR|locus:204012098 AT2G25500 "AT2G25500" [Arabido 0.5 0.510 0.78 1.4e-16
TAIR|locus:2154895 207 AT5G66550 "AT5G66550" [Arabido 0.5 0.241 0.78 4.7e-16
DICTYBASE|DDB_G0281937 197 DDB_G0281937 "maf family prote 0.49 0.248 0.469 1.1e-07
UNIPROTKB|Q47VG7 212 CPS_4557 "Maf-like protein CPS 0.59 0.278 0.389 4e-06
TIGR_CMR|CPS_4557 212 CPS_4557 "septum formation pro 0.59 0.278 0.389 4e-06
UNIPROTKB|Q9KUU7 187 VC_0418 "Maf-like protein VC_0 0.54 0.288 0.388 7.3e-06
TIGR_CMR|VC_0418 187 VC_0418 "maf protein" [Vibrio 0.54 0.288 0.388 7.3e-06
UNIPROTKB|Q81LD6 191 maf "Septum formation protein 0.5 0.261 0.42 0.0002
TIGR_CMR|BA_4686 191 BA_4686 "septum formation prot 0.5 0.261 0.42 0.0002
UNIPROTKB|Q48E97 200 PSPPH_4169 "Maf-like protein P 0.53 0.265 0.377 0.00084
TAIR|locus:2040120 AT2G25500 "AT2G25500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/50 (78%), Positives = 48/50 (96%)

Query:    39 KIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAK 88
             K+ILGS SMARK+ILAEMGY+FT+VTA+IDEK+IRK+KPEDLV+ +AEAK
Sbjct:    11 KLILGSQSMARKQILAEMGYDFTIVTADIDEKAIRKEKPEDLVVTIAEAK 60




GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2154895 AT5G66550 "AT5G66550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281937 DDB_G0281937 "maf family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q47VG7 CPS_4557 "Maf-like protein CPS_4557" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4557 CPS_4557 "septum formation protein Maf" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUU7 VC_0418 "Maf-like protein VC_0418" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0418 VC_0418 "maf protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q81LD6 maf "Septum formation protein Maf" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4686 BA_4686 "septum formation protein MaF" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q48E97 PSPPH_4169 "Maf-like protein PSPPH_4169" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.VII.3535.1
hypothetical protein (198 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
cd00555 180 cd00555, Maf, Nucleotide binding protein Maf 2e-17
COG0424 193 COG0424, Maf, Nucleotide-binding protein implicate 5e-15
PRK00148 194 PRK00148, PRK00148, Maf-like protein; Reviewed 1e-13
cd00985131 cd00985, Maf_Ham1, Maf_Ham1 1e-09
pfam02545 193 pfam02545, Maf, Maf-like protein 1e-09
TIGR00172 183 TIGR00172, maf, MAF protein 1e-08
PRK02141 207 PRK02141, PRK02141, Maf-like protein; Reviewed 1e-07
PRK00884 194 PRK00884, PRK00884, Maf-like protein; Reviewed 4e-07
PRK14368 193 PRK14368, PRK14368, Maf-like protein; Provisional 5e-07
PRK04056 180 PRK04056, PRK04056, Maf-like protein; Reviewed 3e-06
PRK00032 190 PRK00032, PRK00032, Maf-like protein; Reviewed 6e-06
PRK00648 191 PRK00648, PRK00648, Maf-like protein; Reviewed 2e-05
PRK02478 199 PRK02478, PRK02478, Maf-like protein; Reviewed 2e-05
PRK00078 192 PRK00078, PRK00078, Maf-like protein; Reviewed 5e-05
PRK00234 192 PRK00234, PRK00234, Maf-like protein; Reviewed 1e-04
PRK14367 202 PRK14367, PRK14367, Maf-like protein; Provisional 0.004
>gnl|CDD|238310 cd00555, Maf, Nucleotide binding protein Maf Back     alignment and domain information
 Score = 72.1 bits (178), Expect = 2e-17
 Identities = 24/49 (48%), Positives = 35/49 (71%)

Query: 40 IILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAK 88
          +IL S+S  R+E+L ++G  F VV ++IDE  I+ + PED V+ LAEAK
Sbjct: 1  LILASASPRRRELLEQLGIPFEVVPSDIDETPIKGESPEDYVLRLAEAK 49


Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or nucleic acid-binding protein with structural similarity to the hypoxanthine/xanthine NTP pyrophosphatase Ham1 from Methanococcus jannaschii, RNase H from Escherichia coli, and some other nucleotide or RNA-binding proteins. Length = 180

>gnl|CDD|223501 COG0424, Maf, Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|178901 PRK00148, PRK00148, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|238485 cd00985, Maf_Ham1, Maf_Ham1 Back     alignment and domain information
>gnl|CDD|202278 pfam02545, Maf, Maf-like protein Back     alignment and domain information
>gnl|CDD|129276 TIGR00172, maf, MAF protein Back     alignment and domain information
>gnl|CDD|235009 PRK02141, PRK02141, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|234855 PRK00884, PRK00884, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|237693 PRK14368, PRK14368, Maf-like protein; Provisional Back     alignment and domain information
>gnl|CDD|179732 PRK04056, PRK04056, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|234584 PRK00032, PRK00032, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|234807 PRK00648, PRK00648, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|167380 PRK02478, PRK02478, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|234618 PRK00078, PRK00078, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|166864 PRK00234, PRK00234, Maf-like protein; Reviewed Back     alignment and domain information
>gnl|CDD|237692 PRK14367, PRK14367, Maf-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 100
PRK14368 193 Maf-like protein; Provisional 99.78
TIGR00172 183 maf MAF protein. This nonessential gene causes inh 99.78
COG0424 193 Maf Nucleotide-binding protein implicated in inhib 99.77
PRK00234 192 Maf-like protein; Reviewed 99.77
PRK02141 207 Maf-like protein; Reviewed 99.76
PRK04056 180 Maf-like protein; Reviewed 99.76
PRK00148 194 Maf-like protein; Reviewed 99.76
PRK04425 196 Maf-like protein; Reviewed 99.76
PRK00032 190 Maf-like protein; Reviewed 99.75
PRK00884 194 Maf-like protein; Reviewed 99.75
PRK00078 192 Maf-like protein; Reviewed 99.75
PRK04694 190 Maf-like protein; Reviewed 99.75
PRK14367 202 Maf-like protein; Provisional 99.75
cd00555 180 Maf Nucleotide binding protein Maf. Maf has been i 99.74
PRK02478 199 Maf-like protein; Reviewed 99.74
PRK14366 195 Maf-like protein; Provisional 99.73
PRK01526 205 Maf-like protein; Reviewed 99.73
PRK01441 207 Maf-like protein; Reviewed 99.73
PRK00648 191 Maf-like protein; Reviewed 99.73
PF02545 195 Maf: Maf-like protein; InterPro: IPR003697 Maf is 99.73
PRK14363 204 Maf-like protein; Provisional 99.72
PRK14362 207 Maf-like protein; Provisional 99.72
PRK14365 197 Maf-like protein; Provisional 99.71
PRK01839 209 Maf-like protein; Reviewed 99.71
PRK14361 187 Maf-like protein; Provisional 99.7
PRK14364 181 Maf-like protein; Provisional 99.68
KOG1509 209 consensus Predicted nucleic acid-binding protein A 99.53
cd00985131 Maf_Ham1 Maf_Ham1. Maf, a nucleotide binding prote 99.43
>PRK14368 Maf-like protein; Provisional Back     alignment and domain information
Probab=99.78  E-value=8.9e-19  Score=130.32  Aligned_cols=61  Identities=36%  Similarity=0.499  Sum_probs=57.1

Q ss_pred             CCCCeEEEccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhHhh
Q 034257           35 SSPIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDS   95 (100)
Q Consensus        35 ~~~~~iILAS~SPrRkeLL~~lGi~FeVvpsdvDE~~~~~~~p~e~v~~LA~~KA~aV~~~   95 (100)
                      +.+.+|||||+||||++||+++|++|+++++++||+..+..+|.++|..+|+.||.++++.
T Consensus         2 ~~~~~lILAS~SprR~eLL~~~g~~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~   62 (193)
T PRK14368          2 MANSPIVLASASPRRSELLASAGIEFDVVPADIPEEPLPGEEPVDHVLRLAREKARAAAAL   62 (193)
T ss_pred             CCCCcEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999999888899999999999999999764



>TIGR00172 maf MAF protein Back     alignment and domain information
>COG0424 Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK00234 Maf-like protein; Reviewed Back     alignment and domain information
>PRK02141 Maf-like protein; Reviewed Back     alignment and domain information
>PRK04056 Maf-like protein; Reviewed Back     alignment and domain information
>PRK00148 Maf-like protein; Reviewed Back     alignment and domain information
>PRK04425 Maf-like protein; Reviewed Back     alignment and domain information
>PRK00032 Maf-like protein; Reviewed Back     alignment and domain information
>PRK00884 Maf-like protein; Reviewed Back     alignment and domain information
>PRK00078 Maf-like protein; Reviewed Back     alignment and domain information
>PRK04694 Maf-like protein; Reviewed Back     alignment and domain information
>PRK14367 Maf-like protein; Provisional Back     alignment and domain information
>cd00555 Maf Nucleotide binding protein Maf Back     alignment and domain information
>PRK02478 Maf-like protein; Reviewed Back     alignment and domain information
>PRK14366 Maf-like protein; Provisional Back     alignment and domain information
>PRK01526 Maf-like protein; Reviewed Back     alignment and domain information
>PRK01441 Maf-like protein; Reviewed Back     alignment and domain information
>PRK00648 Maf-like protein; Reviewed Back     alignment and domain information
>PF02545 Maf: Maf-like protein; InterPro: IPR003697 Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea Back     alignment and domain information
>PRK14363 Maf-like protein; Provisional Back     alignment and domain information
>PRK14362 Maf-like protein; Provisional Back     alignment and domain information
>PRK14365 Maf-like protein; Provisional Back     alignment and domain information
>PRK01839 Maf-like protein; Reviewed Back     alignment and domain information
>PRK14361 Maf-like protein; Provisional Back     alignment and domain information
>PRK14364 Maf-like protein; Provisional Back     alignment and domain information
>KOG1509 consensus Predicted nucleic acid-binding protein ASMTL [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>cd00985 Maf_Ham1 Maf_Ham1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
2amh_A 207 Septum formation protein MAF homologue, putative; 9e-17
1ex2_A 189 Protein MAF; structural genomics, PSI, protein str 1e-13
2p5x_A 230 ASMTL, N-acetylserotonin O-methyltransferase-like 1e-11
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2 Length = 207 Back     alignment and structure
 Score = 70.7 bits (174), Expect = 9e-17
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 39 KIILGSSSMARKEILAEMGY----EFTVVTAEIDEKSIRKDKPEDLVMALAEAK 88
           +I+G+SS  R  +L E        F ++  +IDEK+ R   P +L  ++A AK
Sbjct: 11 TMIIGTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFELTESIARAK 64


>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A* Length = 189 Back     alignment and structure
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens} Length = 230 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query100
1ex2_A 189 Protein MAF; structural genomics, PSI, protein str 99.77
2p5x_A 230 ASMTL, N-acetylserotonin O-methyltransferase-like 99.76
2amh_A 207 Septum formation protein MAF homologue, putative; 99.74
1vp2_A 208 Putative xanthosine triphosphate pyrophosphatase/ 85.01
1b78_A 193 Pyrophosphatase; structural genomics, hyperthermal 82.48
2car_A 196 Inosine triphosphate pyrophosphatase; hydrolase, i 80.85
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A* Back     alignment and structure
Probab=99.77  E-value=4.7e-19  Score=130.39  Aligned_cols=59  Identities=32%  Similarity=0.414  Sum_probs=55.6

Q ss_pred             CeEEEccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhHhhh
Q 034257           38 IKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDSK   96 (100)
Q Consensus        38 ~~iILAS~SPrRkeLL~~lGi~FeVvpsdvDE~~~~~~~p~e~v~~LA~~KA~aV~~~~   96 (100)
                      .+|||||+||||++||+++|++|+++++++||+..+..+|.++|.+||+.||.+++.++
T Consensus         3 ~~lILAS~SPrR~eLL~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~av~~~~   61 (189)
T 1ex2_A            3 KPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLH   61 (189)
T ss_dssp             CCEEECCCCHHHHHHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEECCCHHHHHHHHhCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence            46999999999999999999999999999999988889999999999999999998754



>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens} Back     alignment and structure
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2 Back     alignment and structure
>1vp2_A Putative xanthosine triphosphate pyrophosphatase/ protein homolog; structural genomics, joint center for structural genomics, JCSG; 1.78A {Thermotoga maritima} SCOP: c.51.4.1 Back     alignment and structure
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A* Back     alignment and structure
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 100
d1ex2a_ 185 c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxI 1e-11
d2amha1 201 c.51.4.2 (A:7-207) Maf homologue Tb11.01.5890 {Try 1e-10
>d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]} Length = 185 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Anticodon-binding domain-like
superfamily: ITPase-like
family: Maf-like
domain: Maf protein
species: Bacillus subtilis [TaxId: 1423]
 Score = 55.7 bits (133), Expect = 1e-11
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 39 KIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAE 86
           +IL S S  RKE+L  +   ++++ +E++EK  R   PE+ V  LA+
Sbjct: 4  PLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAK 51


>d2amha1 c.51.4.2 (A:7-207) Maf homologue Tb11.01.5890 {Trypanosoma brucei [TaxId: 5691]} Length = 201 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query100
d1ex2a_ 185 Maf protein {Bacillus subtilis [TaxId: 1423]} 99.75
d2amha1 201 Maf homologue Tb11.01.5890 {Trypanosoma brucei [Ta 99.68
d1pdaa1217 Porphobilinogen deaminase (hydroxymethylbilane syn 80.35
d1v7ra_ 186 XTP pyrophosphatase {Archaeon Pyrococcus horikoshi 80.32
>d1ex2a_ c.51.4.2 (A:) Maf protein {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Anticodon-binding domain-like
superfamily: ITPase-like
family: Maf-like
domain: Maf protein
species: Bacillus subtilis [TaxId: 1423]
Probab=99.75  E-value=1.2e-18  Score=124.76  Aligned_cols=59  Identities=32%  Similarity=0.414  Sum_probs=56.1

Q ss_pred             CeEEEccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhHhhh
Q 034257           38 IKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKKPSGQDSK   96 (100)
Q Consensus        38 ~~iILAS~SPrRkeLL~~lGi~FeVvpsdvDE~~~~~~~p~e~v~~LA~~KA~aV~~~~   96 (100)
                      .+|||||+||||++||+++|++|++++++|||+..++.+|.++|..+|+.||.++.+..
T Consensus         3 ~~iILAS~SprR~~lL~~~gi~f~v~~~~idE~~~~~~~p~~~v~~lA~~KA~~v~~~~   61 (185)
T d1ex2a_           3 KPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLH   61 (185)
T ss_dssp             CCEEECCCCHHHHHHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEECCCHHHHHHHHhCCCCCEEECCCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc
Confidence            56999999999999999999999999999999999999999999999999999998754



>d2amha1 c.51.4.2 (A:7-207) Maf homologue Tb11.01.5890 {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1pdaa1 c.94.1.1 (A:3-219) Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v7ra_ c.51.4.1 (A:) XTP pyrophosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure