Citrus Sinensis ID: 034318

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLDA
Secondary Structure (PSIPRED)
cccccEEEccccccHHHccccccccccEEcccccccEEcccccccEEEEcccccEEEEcccEEccccccEEccEEEEEEccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHEEcEEccccccEEEcccccEEEccccccccEEEcccccHHcccccccEccccccEEccEEEEEccccccccccEEEEEEEccc
Coil and Loop (DISEMBL)
mstpnlvtcdrskvneigeissnkyEQYLsgtgleielyqpdldmlhcvgipalashehssvalsgpdsvigrglvlhsnpspnpgpgvawgviglda
Flexible Loop (DISEMBL)
mstpnlvtcdrskvneigeissnkyEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLhsnpspnpgpgvawGVIGLDA
Low Complexity Region (SEG)
MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLDA
Disordered region (IsUnstruct)
****************IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE***********VIGRGLVL***********VAWGVI****
Disordered Region (DISOPRED)
***************************YLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHS******GPGVAWGVIGLD*
Disordered Region (DISEMBL)
MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLDA
Disordered Region (DISPRO)
*****LVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLDA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGLDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
255545606	1998	ATP binding protein, putative [Ricinus c	0.622	0.030	0.451	3e-08
224063185	1566	predicted protein [Populus trichocarpa]	0.632	0.039	0.435	6e-08
2274917	126	Cu/Zn superoxide dismutase [Citrus sinen	0.448	0.349	0.622	9e-07

>gi|255545606|ref|XP_002513863.1| ATP binding protein, putative [Ricinus communis] gi|223546949|gb|EEF48446.1| ATP binding protein, putative [Ricinus communis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 1   MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHS 60
           +S+PNL+  + + + EI E+S  K  Q+ +GTG +++LYQP+  MLHC+ IP L SHE  
Sbjct: 460 VSSPNLILSEGASLKEIREMSPYKNGQFATGTGFDVDLYQPE-GMLHCLNIPNLISHESD 518

Query: 61  SV 62
           +V
Sbjct: 519 TV 520

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063185|ref|XP_002301031.1| predicted protein [Populus trichocarpa] gi|222842757|gb|EEE80304.1| predicted protein [Populus trichocarpa]

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 43/62 (69%)

Query: 1   MSTPNLVTCDRSKVNEIGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHEHS 60
           +S+ +LV  + S + EI E+S +K  Q++S +G +++ YQP+L MLHC+ IP L SHE  
Sbjct: 104 ISSIHLVPSEGSSLKEIREMSVHKNGQFVSESGFDVDSYQPELGMLHCLNIPGLVSHETD 163

Query: 61  SV 62
           S+
Sbjct: 164 SI 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2274917|emb|CAA03881.1| Cu/Zn superoxide dismutase [Citrus sinensis]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 37/45 (82%), Gaps = 1/45 (2%)

Query: 53  ALASHE-HSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGL 96
            +A+ E + ++ LSG +SVIGRGLV+HS+PSP+PG GVAWG IGL
Sbjct: 80  GIATFEIYKTIPLSGTNSVIGRGLVVHSSPSPDPGDGVAWGTIGL 124

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	98
pfam00080	140	pfam00080, Sod_Cu, Copper/zinc superoxide dismutas	8e-05

>gnl|CDD|215700 pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 62  VALSGPDSVIGRGLVLH-------SNPSPNPGPGVAWGVI 94
           V LSG DS+IGR LV+H       S P+ N G  +A GVI
Sbjct: 101 VTLSGGDSIIGRSLVIHAGEDDLKSQPTGNAGARLACGVI 140

superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold. Length = 140

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
PLN02386	152	superoxide dismutase [Cu-Zn]	99.92
PLN02642	164	copper, zinc superoxide dismutase	99.92
PRK10290	173	superoxide dismutase; Provisional	99.87
PRK15388	177	Cu/Zn superoxide dismutase; Provisional	99.86
KOG0441	154	consensus Cu2+/Zn2+ superoxide dismutase SOD1 [Ino	99.86
cd00305	144	Cu-Zn_Superoxide_Dismutase Copper/zinc superoxide	99.81
COG2032	179	SodC Cu/Zn superoxide dismutase [Inorganic ion tra	99.81
PF00080	142	Sod_Cu: Copper/zinc superoxide dismutase (SODC); I	99.81
PLN02957	238	copper, zinc superoxide dismutase	99.77
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.61
COG2032	179	SodC Cu/Zn superoxide dismutase [Inorganic ion tra	89.14

>PLN02386 superoxide dismutase [Cu-Zn]

Probab=99.92  E-value=3.2e-25  Score=161.12  Aligned_cols=81  Identities=25%  Similarity=0.437  Sum_probs=71.4

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.++|+||||.-.        ..|+|||||+..         +.+..++|.|+++|+|||||||+
T Consensus        41 ~hg~HIHe~Gd~~~g~~SaGgHfnP~~~~Hg~~~~~~~H~GDLgNi~~~~~G~a~~~~~~~~~~L~g~~~i~GrslVIHa  120 (152)
T PLN02386         41 LHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDENRHAGDLGNVTVGDDGTATFTIVDKQIPLTGPNSIVGRAVVVHA  120 (152)
T ss_pred             ceeEEEeCCCCCCCCcccccCccCCCCCCCCCCCcccCccccccCEEECCCCeEEEEEECCceEeCCCCccCCcEEEEEc
Confidence            4789999999999999999999999731        137899999863         56777889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||+++
T Consensus       121 ~~DD~~~~~~~~s~~~G~aG~RiACgvI~~~  151 (152)
T PLN02386        121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ  151 (152)
T ss_pred             cCCCcCCCcccccccCCCCCceEEEEEEEec
Confidence            999             899999999999985

>PLN02642 copper, zinc superoxide dismutase

Probab=99.92  E-value=5.8e-25  Score=162.33  Aligned_cols=81  Identities=23%  Similarity=0.399  Sum_probs=70.9

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.+.|+||||...        ..|+|||||++.         +.+..++|.++++|+|||||||+
T Consensus        47 ~HG~HIHe~Gd~~~g~~SaGgHfNP~~~~HG~~~~~~rH~GDLgNi~a~~~G~a~~~~~~~~i~L~g~~~iiGRalVVHa  126 (164)
T PLN02642         47 FHGFHIHSFGDTTNGCISTGPHFNPLNRVHGPPNEEERHAGDLGNILAGSDGVAEILIKDKHIPLSGQYSILGRAVVVHA  126 (164)
T ss_pred             ceeEEEcCCCcCCCCcccccCcccCCCCcCCCCCcCCCcccccCCEEECCCCeEEEEEEcCceecCCCCCcCCcEEEEec
Confidence            4789999999999999999999999732        138899999864         55667788899999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||++.
T Consensus       127 ~~DD~~~~~~~~s~~tGnaG~RiACGVI~~~  157 (164)
T PLN02642        127 DPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQ  157 (164)
T ss_pred             cCCccCcCcccccccCCCCCceEEEEEEEec
Confidence            999             899999999999974

>PRK10290 superoxide dismutase; Provisional

Probab=99.87  E-value=3.3e-22  Score=148.64  Aligned_cols=79  Identities=19%  Similarity=0.178  Sum_probs=65.4

Q ss_pred             cccccccCCCCcc----cc----ccCCCCccCCCCC--------CCCCCCCCceEEeecCeEEe-------eCCCCcccc
Q 034318           17 IGEISSNKYEQYL----SG----TGLEIELYQPDLD--------MLHCVGIPALASHEHSSVAL-------SGPDSVIGR   73 (98)
Q Consensus        17 ~re~~~~~~gdfs----sg----~~sdgg~ynP~~~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiGR   73 (98)
                      .+.+|+|+++|.+    .|    |.+.|+||||+..        ..|+|||||++.-.|+.+++       .+.++|+||
T Consensus        63 ~HGfHIHe~Gdc~~~~~~G~~~~~~sAGgHfNP~~~~~hg~p~~~~H~GDL~ni~a~~dG~a~~~~~~~~~~~~~~i~Gr  142 (173)
T PRK10290         63 EHGFHIHAKGSCQPATKDGKASAAEAAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDPVIAPRLKSLDEVKDK  142 (173)
T ss_pred             ceEEEEeCCCccCCcccCCCcccccccCCccCCCCCcCCCCCCCCCCcCcccCEEECCCeeEEEEEEeCCccCccccCCc
Confidence            3789999999976    33    7789999999732        13899999998877766543       357889999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||.
T Consensus       143 alVIH~~~DD~~~~~~~~GnaG~RiACGVI~  173 (173)
T PRK10290        143 ALMVHVGGDNMSDQPKPLGGGGERYACGVIK  173 (173)
T ss_pred             EEEEECCCCCCCCCCCcCCCCcceEEEEeEC
Confidence            999999999         9999999999994

>PRK15388 Cu/Zn superoxide dismutase; Provisional

Probab=99.86  E-value=6.6e-22  Score=147.71  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=64.4

Q ss_pred             cccccccCCCCcc----cc----ccCCCCccCCCCC---------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318           17 IGEISSNKYEQYL----SG----TGLEIELYQPDLD---------MLHCVGIPALASHEHSSVAL-------SGPDSVIG   72 (98)
Q Consensus        17 ~re~~~~~~gdfs----sg----~~sdgg~ynP~~~---------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG   72 (98)
                      .+.+|+|+++|-+    .|    |.+.|+||||+..         ..|+|||||++.-.|+..++       .+.++|+|
T Consensus        65 ~HGfHIHe~GdC~~~~~~G~~~~~~SAGgHfNP~~~~~Hg~p~~~~~H~GDLpNi~a~~dG~a~~~~~~~~~~~~~~i~G  144 (177)
T PRK15388         65 IHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKG  144 (177)
T ss_pred             ceEEEEccCCCccCcccCCCcccccccCCCcCCCCCCCCCCCCCCCCCcCcCcCEEECCCccEEEEEEeCCcccCcccCC
Confidence            4789999999854    34    7789999999632         13889999998877765543       24678999


Q ss_pred             cEEEEecCCC---------CCCCCceeEEEEe
Q 034318           73 RGLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        73 RalVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      ||||||+++|         ||||+|||||||+
T Consensus       145 ralVIHa~~DD~~~~p~~~GnaG~RiACGVI~  176 (177)
T PRK15388        145 HSLMIHKGGDNYSDKPAPLGGGGARFACGVIE  176 (177)
T ss_pred             cEEEEECCCCCCCCCCCcCCCCCceEEEEeec
Confidence            9999999999         9999999999996

>KOG0441 consensus Cu2+/Zn2+ superoxide dismutase SOD1 [Inorganic ion transport and metabolism]

Probab=99.86  E-value=7e-22  Score=145.25  Aligned_cols=81  Identities=25%  Similarity=0.435  Sum_probs=71.9

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCce---------EEeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPAL---------ASHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~---------~~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      -|.+|+|+|||.+.||-|+|.||||....        -|++||.|+         ..+.|..++|+|+++|+||++|||+
T Consensus        43 ~hgfHvHqfGD~t~GC~SaGphFNp~~~~hg~p~~~~rH~gdlGnv~~~~~G~~~~~~~d~~i~l~g~~sivgrs~vvHa  122 (154)
T KOG0441|consen   43 KHGFHVHQFGDNTNGCKSAGPHFNPNKKTHGGPVDEVRHVGDLGNVDAKDDGVISRVFGDSVITLSGPNSIVGRSVVVHA  122 (154)
T ss_pred             eeeEEEEeccCCCCChhcCCCCCCCcccCCCCccccccccccccccccCCCceEEEEEccceEEEeeccccceeEEEEec
Confidence            47899999999999999999999999321        168888875         4567888999999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|+|||+|+++
T Consensus       123 ~~ddLg~G~~~~s~ktgnag~r~aCgvi~~~  153 (154)
T KOG0441|consen  123 GEDDLGKGGHELSKKTGNAGARPACGVIGIA  153 (154)
T ss_pred             cCccccCCchhhhhhccccCCCccceeeecc
Confidence            999             999999999999986

>cd00305 Cu-Zn_Superoxide_Dismutase Copper/zinc superoxide dismutase (SOD)

Probab=99.81  E-value=5.8e-20  Score=131.12  Aligned_cols=79  Identities=19%  Similarity=0.254  Sum_probs=68.6

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCC---------CCCCCCceEE---------eecCeEEeeCCCCccccEEEEe
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDML---------HCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLH   78 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~---------H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIH   78 (98)
                      .+.+|+|+++|.+.+|.++|+||||. ...         |+||||+++.         +.+..++|++.++++|||||||
T Consensus        40 ~hg~HIHe~Gd~~~~~~saGgh~np~-~~~hg~~~~~~~h~GDLgni~~~~~G~~~~~~~~~~~~l~~~~~iiGrsivVH  118 (144)
T cd00305          40 LHGFHIHEFGDCTNGCTSAGGHFNPF-GKKHGGPNDEGRHAGDLGNIVADKDGVATVSVLDPLISLKGGNSIIGRSLVVH  118 (144)
T ss_pred             ceeEEEEecCCCCCccccccCccCCC-CCCCCCCCCCCCCCCcCCCEEECCCCeEEEEEEeCcEEcCCCCCcCCcEEEEe
Confidence            57899999999999999999999997 332         8899999865         4456677888889999999999


Q ss_pred             cCCC-------CCCCCceeEEEEee
Q 034318           79 SNPS-------PNPGPGVAWGVIGL   96 (98)
Q Consensus        79 a~~D-------GnaG~RiACGvI~~   96 (98)
                      +++|       |++|.|++||+|-.
T Consensus       119 ~~~Dd~~~~p~~~sg~~~~~G~~~a  143 (144)
T cd00305         119 AGQDDLGKGPDELSGGTGNAGVRVA  143 (144)
T ss_pred             cCCCCCCCCCCcccccceeeEeEEe
Confidence            9999       88999999999854

superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene causes familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Cytoplasmic and periplasmic SODs exist as dimers, whereas chloroplastic and extracellular enzymes exist as tetramers. Structure supports independent functional evolution in prokaryotes (P-class) and eukaryotes (E-class) [PMID:.8176730].

>COG2032 SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.81  E-value=5.5e-20  Score=137.94  Aligned_cols=78  Identities=24%  Similarity=0.274  Sum_probs=58.2

Q ss_pred             ccccccCCCCccc------cccCCCCccCCC---------CCCCCCCCCCceEEeec---------CeEEeeCCCCcccc
Q 034318           18 GEISSNKYEQYLS------GTGLEIELYQPD---------LDMLHCVGIPALASHEH---------SSVALSGPDSVIGR   73 (98)
Q Consensus        18 re~~~~~~gdfss------g~~sdgg~ynP~---------~~~~H~gd~p~~~~~~d---------~~i~L~G~~siiGR   73 (98)
                      +.+|+||.|+=..      .+.|.|+||||.         ....|+||||+++...|         ..++|.+..+++||
T Consensus        69 hGfHIHe~G~C~pkdgk~~~~~sAGGHfdP~~~~~Hg~p~~~~~H~GDLP~L~v~~dG~a~~~v~~~~~~l~~l~~v~G~  148 (179)
T COG2032          69 HGFHIHEKGSCTPKDGKPVDFLSAGGHFDPQNTKKHGGPNADGGHAGDLPNLFVNADGKATLPVLAPRLKLKGLLEVKGR  148 (179)
T ss_pred             eeEEecccCCCcCCCCCCcccccccCCcCCccCCCCCCCCCCCCCcCcCcceEECCCCcEEEEEecccceeccccccCCe
Confidence            4445555444433      234455677776         23469999999987555         45567788999999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||+|+|+|||||+
T Consensus       149 alvIHag~Dd~~~~P~p~G~aG~R~ACGVI~  179 (179)
T COG2032         149 ALVIHAGGDDYSTQPEPLGGAGARVACGVIK  179 (179)
T ss_pred             EEEEEcCCccccCCCccCCCCccceeeeeeC
Confidence            999999999         9999999999995

>PF00080 Sod_Cu: Copper/zinc superoxide dismutase (SODC); InterPro: IPR001424 Superoxide dismutases are ubiquitous metalloproteins that prevent damage by oxygen-mediated free radicals by catalysing the dismutation of superoxide into molecular oxygen and hydrogen peroxide []

Probab=99.81  E-value=1.9e-20  Score=131.53  Aligned_cols=78  Identities=28%  Similarity=0.444  Sum_probs=67.8

Q ss_pred             ccccccccCCCCc-cccccCCCCccCCCCCC---------CCCCCCCceE---------EeecCeEEeeCCCCccccEEE
Q 034318           16 EIGEISSNKYEQY-LSGTGLEIELYQPDLDM---------LHCVGIPALA---------SHEHSSVALSGPDSVIGRGLV   76 (98)
Q Consensus        16 ~~re~~~~~~gdf-ssg~~sdgg~ynP~~~~---------~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalV   76 (98)
                      ..+.+|+|++|+- +..|.+.|+||||. ..         .|.|||+++.         .+.|..++|+|+++|+|||||
T Consensus        39 g~~~~hIH~~g~~~~~~c~s~G~h~np~-~~~~~~~~~~~~~~GDL~~~~~~~~G~~~~~~~~~~l~l~g~~siiGRSiV  117 (142)
T PF00080_consen   39 GQHGYHIHENGDCSSNNCSSAGGHYNPT-NVPHGGPSADNCHAGDLGNKYVDADGSASFTFTDSNLSLSGPNSIIGRSIV  117 (142)
T ss_dssp             EEEEEEEESSSTCSTTTTGGG-SBCETT-TSSSSSTTSSSSCTTEEEEEEESTTSEEEEEEEESSSBSSSTTBHTTSEEE
T ss_pred             CCceEEEEeccccccccccccceecCcc-ccccCCccccccccccccccccccCCceEEEEEeeeEeccCCccccCCEEE
Confidence            3788999999999 88999999999999 42         3668898764         367788889999999999999


Q ss_pred             EecCCC-------CCCCCceeEEEE
Q 034318           77 LHSNPS-------PNPGPGVAWGVI   94 (98)
Q Consensus        77 IHa~~D-------GnaG~RiACGvI   94 (98)
                      ||+++|       |++|+|||||+|
T Consensus       118 IH~~~~d~~~~~~g~~g~RlACg~I  142 (142)
T PF00080_consen  118 IHSGPDDFTSQPTGNAGARLACGVI  142 (142)
T ss_dssp             EESSSSTTTHHHHTTTTSEEEEEEE
T ss_pred             EEeCCCCcccccCCCCCCcEEEEeC
Confidence            999998       999999999998

Superoxide is a normal by-product of aerobic respiration and is produced by a number of reactions, including oxidative phosphorylation and photosynthesis. The dismutase enzymes have a very high catalytic efficiency due to the attraction of superoxide to the ions bound at the active site [, ]. There are three forms of superoxide dismutase, depending on the metal cofactor: Cu/Zn (which binds both copper and zinc), Fe and Mn types. The Fe and Mn forms are similar in their primary, secondary and tertiary structures, but are distinct from the Cu/Zn form []. Prokaryotes and protists contain Mn, Fe or both types, while most eukaryotic organisms utilise the Cu/Zn type.; GO: 0046872 metal ion binding, 0006801 superoxide metabolic process, 0055114 oxidation-reduction process; PDB: 2K4W_A 2APS_B 2WWN_B 2WWO_B 1ESO_A 2AQM_A 3F7L_A 3F7K_A 2E47_A 2E46_A ....

>PLN02957 copper, zinc superoxide dismutase

Probab=99.77  E-value=9.7e-19  Score=133.42  Aligned_cols=80  Identities=25%  Similarity=0.324  Sum_probs=66.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC---CCCCCCCCceEEeecCeEEee------CCCCccccEEEEecCCC-CCCC
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD---MLHCVGIPALASHEHSSVALS------GPDSVIGRGLVLHSNPS-PNPG   86 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~---~~H~gd~p~~~~~~d~~i~L~------G~~siiGRalVIHa~~D-GnaG   86 (98)
                      .+.+|+|++||.+.+|.++|+||||...   ..|+|||||++...++.+.+.      ...+|+|||||||+++| ++  
T Consensus       119 ~hg~hiHe~Gd~~~~~~saG~hfnp~~~~h~~~h~GDLgni~~~~~G~a~~~~~~~~~~l~~iiGrs~vih~~~D~~~--  196 (238)
T PLN02957        119 THGWSINEYGDLTRGAASTGKVYNPSDDDTDEEPLGDLGTLEADENGEATFSGTKEKLKVWDLIGRSLAVYATADKSG--  196 (238)
T ss_pred             cEEEEEcCCCCCCCCccccCCCCCCccCCCCCCCCCccCCEEeCCCceEEEEEECCCcCccccCCcEEEEEeCCCCCC--
Confidence            5899999999999999999999999832   248899999988777665541      34689999999999999 43  


Q ss_pred             CceeEEEEeecC
Q 034318           87 PGVAWGVIGLDA   98 (98)
Q Consensus        87 ~RiACGvI~~~a   98 (98)
                      .++|||||+.+|
T Consensus       197 ~~~~~gvi~rsa  208 (238)
T PLN02957        197 PGIAAAVIARSA  208 (238)
T ss_pred             CCeEEEEEeccc
Confidence            359999999876

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.61  E-value=7.7e-16  Score=119.25  Aligned_cols=81  Identities=22%  Similarity=0.305  Sum_probs=66.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCCC----CCCCCceEEeecCeEEeeCC------CCccccEEEEecCCC----
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLH----CVGIPALASHEHSSVALSGP------DSVIGRGLVLHSNPS----   82 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H----~gd~p~~~~~~d~~i~L~G~------~siiGRalVIHa~~D----   82 (98)
                      .+-.|+|+|||++.||.|+|.||||+ +.+|    .+||.++....++...+.++      -.+||||+||-+..|    
T Consensus       121 ~h~~~Ihe~GDlsng~~StG~~ynpf-~~p~g~~~~gDLGn~~ad~nGraf~s~~de~LkvwdlIGRsvVi~k~~ddlgg  199 (247)
T KOG4656|consen  121 LHGLHIHEYGDLSNGCESTGKHYNPF-QEPHGCPNEGDLGNNRADKNGRAFFSAPDEKLKVWDLIGRSVVISKSLDDLGG  199 (247)
T ss_pred             ccceeEeeccccccchhhcccccCCC-cCCCCCCCcccccccccccCCcEEEecccccccHhhhhceeEEEeccccccCC
Confidence            45689999999999999999999999 5555    57888766655555555444      267999999999977    


Q ss_pred             --CCCCCceeEEEEeecC
Q 034318           83 --PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        83 --GnaG~RiACGvI~~~a   98 (98)
                        ||+|+|+|||||..+|
T Consensus       200 ~p~nsge~la~gvIARSA  217 (247)
T KOG4656|consen  200 EPGNSGERLACGVIARSA  217 (247)
T ss_pred             CCCCcCcceeEEEeeecc
Confidence              8999999999999876

>COG2032 SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]

Probab=89.14  E-value=0.29  Score=37.21  Aligned_cols=30  Identities=20%  Similarity=0.183  Sum_probs=19.4

Q ss_pred             Cccccccccccc--cCCCCccccccC--------CCCccC
Q 034318           11 RSKVNEIGEISS--NKYEQYLSGTGL--------EIELYQ   40 (98)
Q Consensus        11 ~~~~~~~re~~~--~~~gdfssg~~s--------dgg~yn   40 (98)
                      +.|+||+..|..  -|.++|.|++++        +++.++
T Consensus        70 GfHIHe~G~C~pkdgk~~~~~sAGGHfdP~~~~~Hg~p~~  109 (179)
T COG2032          70 GFHIHEKGSCTPKDGKPVDFLSAGGHFDPQNTKKHGGPNA  109 (179)
T ss_pred             eEEecccCCCcCCCCCCcccccccCCcCCccCCCCCCCCC
Confidence            346676666555  122699999987        456666

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	98
1to4_A	156	Superoxide dismutase; beta-barrel, oxidoreductase;	3e-06
2jlp_A	222	Extracellular superoxide dismutase (Cu-Zn); glycol	3e-06
2q2l_A	152	Superoxide dismutase; SOD, SAD, antioxidant, oxido	3e-06
3pu7_A	154	Superoxide dismutase [CU-ZN], chloroplastic; oxido	4e-06
2wyt_A	153	Superoxide dismutase [CU-ZN]; oxidoreductase, dise	4e-06
1f1g_A	154	Cuznsod, copper-zinc superoxide dismutase; nitric	1e-05
3l9y_A	154	Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY	1e-05
1xso_A	150	Copper,zinc superoxide dismutase; oxidoreductase (	1e-05
3f7l_A	152	Copper,zinc superoxide dismutase; oxidoreductase (	2e-05
3ce1_A	168	Superoxide dismutase [CU-ZN]; greek-KEY beta barre	4e-05
3kbe_A	157	Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dis	4e-05
2e47_A	156	EA4, TIME interVal measuring enzyme TIME; motallop	6e-05
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	7e-04

>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A Length = 156

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 13/57 (22%)

Query: 53  ALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           A+ +     ++L+G  S+IGR +V+H             S  + N G  +A GV+GL
Sbjct: 97  AVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRGGHELSKVTGNAGGRLACGVVGL 153

>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens} Length = 222

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 13/68 (19%)

Query: 42  DLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPG 88
           D                  + +L+GP S++GR +V+H             S  + N G  
Sbjct: 127 DFGNFAVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRR 186

Query: 89  VAWGVIGL 96
           +A  V+G+
Sbjct: 187 LACCVVGV 194

>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea} Length = 152

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 13/52 (25%)

Query: 60  SSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGLDA 98
             + L+GP S+IGR +V+H             S  + N G  +A G+IGL  
Sbjct: 101 KQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152

>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 1srd_A Length = 154

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 13/50 (26%)

Query: 60  SSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           + + L+GP+SV+GR LV+H             S  + N G  +A GV+GL
Sbjct: 102 NQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 151

>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ... Length = 153

 Score = 41.6 bits (98), Expect = 4e-06
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 13/57 (22%)

Query: 53  ALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           A  S E S ++LSG   +IGR LV+H             S  + N G  +A GVIG+
Sbjct: 95  ADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151

>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A Length = 154

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 13/50 (26%)

Query: 60  SSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           S + L GP SV+GR +V+H             S  + N GP  A GVIGL
Sbjct: 103 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152

>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} PDB: 3l9e_A Length = 154

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 13/57 (22%)

Query: 53  ALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
              S + S ++L GP+S+IGR LV+H             S  + N G  +A GVIGL
Sbjct: 95  TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 151

>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1 Length = 150

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 42  DLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPG 88
           DL  +   G  A      S ++L GP+S+IGR  V+H             S  + N G  
Sbjct: 81  DLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGR 140

Query: 89  VAWGVIGL 96
           +A GVIG 
Sbjct: 141 LACGVIGY 148

>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} PDB: 3f7k_A Length = 152

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 13/50 (26%)

Query: 60  SSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
             V L+GPDSVIGR LV+H             S  + N G  +A GVIG+
Sbjct: 100 KLVKLTGPDSVIGRTLVVHVDEDDLGRGGHEQSKITGNAGGRLACGVIGI 149

>3ce1_A Superoxide dismutase [CU-ZN]; greek-KEY beta barrel, antioxidant, copper, metal-binding, oxidoreductase, zinc; 1.20A {Cryptococcus liquefaciens} Length = 168

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 13/52 (25%)

Query: 60  SSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGLDA 98
           S ++L GP S+IGR +V+H             S  + N G   A GVIG+ A
Sbjct: 106 SQLSLVGPHSIIGRTIVIHAGEDDLGKTDHPESLKTGNAGARSACGVIGIAA 157

>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} PDB: 3kbf_A Length = 157

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 16/55 (29%)

Query: 60  SSVALSGPDSVIGRGLVLH----------------SNPSPNPGPGVAWGVIGLDA 98
           + V L GP++V+GR +V+H                S  + N G   A GVI L A
Sbjct: 101 TLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALAA 155

>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A Length = 156

 Score = 38.5 bits (90), Expect = 6e-05
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 13/48 (27%)

Query: 62  VALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           ++LSGP  +IGR +VLH             S  + N G  VA GVIG+
Sbjct: 108 ISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGI 155

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 35.7 bits (81), Expect = 7e-04
 Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 9/24 (37%)

Query: 34 LE--IELYQPDLDMLHCVGIPALA 55
          L+  ++LY  D         PALA
Sbjct: 25 LQASLKLYADD-------SAPALA 41

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
3f7l_A	152	Copper,zinc superoxide dismutase; oxidoreductase (	99.93
3l9y_A	154	Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY	99.93
3pu7_A	154	Superoxide dismutase [CU-ZN], chloroplastic; oxido	99.93
4a7u_A	153	Superoxide dismutase [CU-ZN]; oxidoreductase, amyo	99.93
3kbe_A	157	Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dis	99.93
1f1g_A	154	Cuznsod, copper-zinc superoxide dismutase; nitric	99.92
2wyt_A	153	Superoxide dismutase [CU-ZN]; oxidoreductase, dise	99.92
2e47_A	156	EA4, TIME interVal measuring enzyme TIME; motallop	99.92
2q2l_A	152	Superoxide dismutase; SOD, SAD, antioxidant, oxido	99.92
1xso_A	150	Copper,zinc superoxide dismutase; oxidoreductase (	99.92
1to4_A	156	Superoxide dismutase; beta-barrel, oxidoreductase;	99.91
3ce1_A	168	Superoxide dismutase [CU-ZN]; greek-KEY beta barre	99.91
2jlp_A	222	Extracellular superoxide dismutase (Cu-Zn); glycol	99.89
1do5_A	154	Human copper chaperone for superoxide dismutase do	99.89
1xtm_B	175	Hypothetical superoxide dismutase-like protein YO;	99.89
2aqm_A	154	Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10	99.87
2aqp_A	164	Superoxide dismutase [CU-ZN]; electrostatic guidan	99.86
1oal_A	151	Superoxide dismutase; oxidoreductase, prokaryotic	99.86
1eqw_A	156	Cu,Zn superoxide dismutase; greek KEY B-barrel, ox	99.86
1eso_A	154	SOD, Cu, Zn superoxide dismutase; oxidoreductase,	99.86
1pzs_A	208	Superoxide dismutase [CU-ZN]; Cu-protein, beta cor	99.85
1z9n_A	177	Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxid	99.84
1ej8_A	140	Lys7; beta barrel, copper chaperone for SOD, domai	99.83
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	99.82
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.82

>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A

Probab=99.93  E-value=5.2e-27  Score=169.15  Aligned_cols=81  Identities=28%  Similarity=0.432  Sum_probs=72.3

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.|+|+||||...        ..|.|||||+..         +.|..++|+|+++|+|||||||+
T Consensus        40 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~H~GDLgni~~~~~G~a~~~~~d~~i~L~g~~~iiGRslVIHa  119 (152)
T 3f7l_A           40 KHGFHVHEFGDNTNGCTSAGGHFNPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHV  119 (152)
T ss_dssp             EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSSCTTEEEEEEECTTSCEEEEEEESSCBSSSTTBCTTCEEEEES
T ss_pred             cccEEEeecCcCCCCcccccccccccCCcCCCCCCCCCccccccCeEECCCCeEEEEEECcceeccCCcccCCeEEEEEc
Confidence            4789999999999999999999999832        148999999753         56778889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||+++
T Consensus       120 ~~Dd~g~g~~~~s~~tGnaG~RiACgvI~~~  150 (152)
T 3f7l_A          120 DEDDLGRGGHEQSKITGNAGGRLACGVIGIT  150 (152)
T ss_dssp             SCCCTTCSCSTTHHHHTTCCSEEEEEECEEC
T ss_pred             CCccCCCCCCcCcccCCCCCceEEEEEEEEe
Confidence            999             899999999999986

>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A

Probab=99.93  E-value=1.1e-26  Score=167.69  Aligned_cols=81  Identities=28%  Similarity=0.527  Sum_probs=71.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE----------eecCeEEeeCCCCccccEEEEe
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS----------HEHSSVALSGPDSVIGRGLVLH   78 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~----------~~d~~i~L~G~~siiGRalVIH   78 (98)
                      .+.+|+|+++|.+.+|.|+|+||||...        ..|.||||+++.          +.|..++|+|+++|+|||||||
T Consensus        41 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~~G~a~~~~~d~~~sL~g~~~iiGRsiVIH  120 (154)
T 3l9y_A           41 KHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH  120 (154)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEESSTTSEEEEEEEESSCBSSSTTBCTTSEEEEE
T ss_pred             CccEEEEecCcCCCCcccccccccccCCcCCCCCcccccccccCCEEEeCCCCeEEEEEEcCceEecCccccCCeEEEEE
Confidence            4789999999999999999999999832        137899999875          3467778889999999999999


Q ss_pred             cCCC-------------CCCCCceeEEEEeec
Q 034318           79 SNPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        79 a~~D-------------GnaG~RiACGvI~~~   97 (98)
                      +++|             ||||+|||||||+++
T Consensus       121 a~~Dd~g~g~~~~s~~tGnaG~RiaCgvI~~~  152 (154)
T 3l9y_A          121 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLA  152 (154)
T ss_dssp             SSCCCTTCSSSTTTTTTTTCCCEEEEEECEEC
T ss_pred             cCCccCCCCCCcCcccCCCCCCcEEEEEEEEe
Confidence            9999             899999999999986

>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A

Probab=99.93  E-value=9.6e-27  Score=168.23  Aligned_cols=81  Identities=26%  Similarity=0.450  Sum_probs=72.0

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.|+|+||||...        ..|.||||++.         .+.|..++|+|+++|+|||||||+
T Consensus        42 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~l~L~g~~~iiGRslVIH~  121 (154)
T 3pu7_A           42 LHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHE  121 (154)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCCSSSTTCCTTSEEEEES
T ss_pred             cccEEEeecCCCCCCccccccccCCccCcCCCCCccCCcCCcccCEEeCCCCcEEEEEEeCCeeeCCCCccCCeEEEEEC
Confidence            4789999999999999999999999832        13789999875         356778888999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||+++
T Consensus       122 ~~DD~~~g~~~~s~~tGnaG~RiaCGvIg~~  152 (154)
T 3pu7_A          122 LEDDLGKGGHELSLTTGNAGGRLACGVVGLT  152 (154)
T ss_dssp             SCCCTTCSCCTTTTTTTTCCCEEEEEECEEC
T ss_pred             CCccCCCCCCcCCcCCCCCcCcEEEEEEEEe
Confidence            999             899999999999986

>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...

Probab=99.93  E-value=8.6e-27  Score=168.02  Aligned_cols=81  Identities=26%  Similarity=0.404  Sum_probs=72.1

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.|+|+||||...        ..|.||||++.         .+.|..++|+|+++|+|||||||+
T Consensus        42 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~isL~g~~~iiGRsiVIHa  121 (153)
T 4a7u_A           42 LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHE  121 (153)
T ss_dssp             EEEEEEESCCCCTTSGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCBSSGGGBCTTSEEEEES
T ss_pred             cccEEEeecCccccccccccCeecccCCcCCCCCcCCCccCcccCeEeCCCceEEEEEEcCceEecCCcccCCeEEEEEc
Confidence            4789999999999999999999999832        13889999975         356778889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||+++
T Consensus       122 ~~Dd~g~g~~~~s~~tGnaG~RiaCgvI~~~  152 (153)
T 4a7u_A          122 KADDLGKGGNEESTKTGNAGSRLACGVIGIA  152 (153)
T ss_dssp             SCCCTTCSSSGGGGTTTTCCSEEEEEECEEC
T ss_pred             CCccCCCCCCcCcccCCCCcCeEEEEEEEEe
Confidence            999             899999999999986

>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A

Probab=99.93  E-value=2.4e-26  Score=166.60  Aligned_cols=82  Identities=26%  Similarity=0.389  Sum_probs=70.6

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.++|+||||....        .|.||||++.         .+.|..++|+|+++|+|||||||+
T Consensus        41 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~L~g~~siiGRsiVIHa  120 (157)
T 3kbe_A           41 LHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHA  120 (157)
T ss_dssp             CEEEEEESCCCCTTTTGGGCSBCCTTCCCSSSGGGGSCCTTEEEEECCCTTSEEEEEECSCCCCSSSTTCCTTSEEEEEC
T ss_pred             cccEEEeecCccCcccccccccccccCCcCCCCCcCCCccCcccCEEeCCCCeEEEEEEecceeeCCCcccCCeEEEEeC
Confidence            57899999999999999999999998321        3889999874         466788899999999999999999


Q ss_pred             CCC----------------CCCCCceeEEEEeecC
Q 034318           80 NPS----------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D----------------GnaG~RiACGvI~~~a   98 (98)
                      ++|                ||||+|||||||+++.
T Consensus       121 ~~Dd~~~g~~~~~~~s~~tGnaG~RiaCGvI~~~~  155 (157)
T 3kbe_A          121 GQDDLGEGVGDKAEESKKTGNAGARAACGVIALAA  155 (157)
T ss_dssp             C-----------------CCTTTTEEEEEEEEECC
T ss_pred             CCCcCCCCCCCCCcCccCCCCCcCcEEEEEEEeec
Confidence            998                6999999999999863

>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A

Probab=99.92  E-value=3e-26  Score=165.32  Aligned_cols=82  Identities=28%  Similarity=0.413  Sum_probs=72.8

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.++|+||||....        .|.||||++.         .+.|..++|+|+++|+|||||||+
T Consensus        43 ~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRsvVIH~  122 (154)
T 1f1g_A           43 ERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHA  122 (154)
T ss_dssp             EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTSSSSCTTEEEEEECCTTSCEEEEEEESSCCSSSTTCCTTSEEEECS
T ss_pred             eEeEEEecCCCCCCChhhccCccCCCCCCCCCCCcCCcccCcccCeEECCCceEEEEEEccceEcCCCCCcCCCEEEEee
Confidence            58899999999999999999999998321        3789999875         367788889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeecC
Q 034318           80 NPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      ++|             ||+|+|||||||++++
T Consensus       123 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~~  154 (154)
T 1f1g_A          123 GQDDLGKGDTEESLKTGNAGPRPACGVIGLTN  154 (154)
T ss_dssp             SCCCTTCSSSTTHHHHTTCCCCCEEEECEEEC
T ss_pred             cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence            988             8999999999999875

>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...

Probab=99.92  E-value=5.9e-26  Score=163.80  Aligned_cols=82  Identities=26%  Similarity=0.415  Sum_probs=72.1

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|++||.+.+|.++|+||||....        .|.||||++..         +.|..++|+|+++|+|||||||+
T Consensus        42 ~hg~HIHe~gd~~~~c~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~  121 (153)
T 2wyt_A           42 LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE  121 (153)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSSBSSGGGBCTTSEEEEES
T ss_pred             ceeEEEecCCcCCCCcccccCccCCCCCCCCCCccCCCccCcccCeEECCCceEEEEEEcceEeccCCCCcCCCEEEEee
Confidence            47899999999999999999999998321        27899998764         66778888999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeecC
Q 034318           80 NPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      ++|             ||+|+|||||||+++.
T Consensus       122 ~~Dd~~~~~~~~s~~tGnaG~RiACGvI~~~~  153 (153)
T 2wyt_A          122 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ  153 (153)
T ss_dssp             SCCCTTCSSSGGGGTTTTCCSEEEEEECEECC
T ss_pred             cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence            987             7999999999999863

>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A

Probab=99.92  E-value=8.3e-26  Score=163.62  Aligned_cols=81  Identities=26%  Similarity=0.355  Sum_probs=71.6

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|++||.+.+|.|+|+||||....        .|.||||++..         +.|..++|+|+++|+|||||||+
T Consensus        46 ~hg~HIHe~Gd~s~~c~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~  125 (156)
T 2e47_A           46 EYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHE  125 (156)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSSCTTEEEEEEECTTSEEEEEEEESSCBSSSTTBCTTSEEEEES
T ss_pred             cEEEEEeCCCcCCCChhhccCccCCCCCCCCCCCcCCCccccccCeEECCCceEEEEEEccceeccCCCCcCCCEEEEee
Confidence            47899999999999999999999998321        37899998754         66788889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||+|+|||||||+++
T Consensus       126 ~~Dd~~~~~~~~s~~tGnaG~RiACGvI~~~  156 (156)
T 2e47_A          126 KADDYGKSDHPDSRKTGNAGGRVACGVIGIL  156 (156)
T ss_dssp             SCCCTTCSSSTTHHHHTTCCSEEEEEECEEC
T ss_pred             cCcccccccccccccCCCCCCcEEEEEEEeC
Confidence            998             899999999999974

>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}

Probab=99.92  E-value=1.1e-25  Score=162.24  Aligned_cols=82  Identities=24%  Similarity=0.439  Sum_probs=72.2

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.++|+||||...        ..|.||||++..         +.|..++|+|+++|+|||||||+
T Consensus        41 ~hg~HIHe~Gd~~~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~l~g~~siiGRslVIH~  120 (152)
T 2q2l_A           41 LHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHA  120 (152)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSCCTTEEEEEEECTTSCEEEEEEESSCCSSSTTCCTTSEEEEES
T ss_pred             ceeEEEeecCccCCCcccccCccCCCCCCCCCCCcCCCcCCcccCeEECCCCcEEEEEEccceecCCCCccCCCEEEEee
Confidence            5789999999999999999999999832        137899999764         66778889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeecC
Q 034318           80 NPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      ++|             ||||+|||||||+++.
T Consensus       121 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~~  152 (152)
T 2q2l_A          121 DPDDLGKGGHELSKSTGNAGGRIACGIIGLQG  152 (152)
T ss_dssp             SCCCTTCSCSTTTTTTTTCCCEEEEEECEECC
T ss_pred             cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence            987             8999999999999863

>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1

Probab=99.92  E-value=1.8e-25  Score=160.71  Aligned_cols=81  Identities=25%  Similarity=0.402  Sum_probs=71.0

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE--------eecCeEEeeCCCCccccEEEEecC
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS--------HEHSSVALSGPDSVIGRGLVLHSN   80 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~--------~~d~~i~L~G~~siiGRalVIHa~   80 (98)
                      .+.+|+|+++|.+.+|.++|+||||...        ..|.||||++..        +.|..++|+|+++|+|||||||++
T Consensus        40 ~hg~HIHe~Gd~s~gc~saG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~G~a~~~~~d~~~~l~g~~siiGRsiVIH~~  119 (150)
T 1xso_A           40 LHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEK  119 (150)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSSCTTEEEEEEEBTTEEEEEEEESSCBSSSTTBCTTSEEEEESS
T ss_pred             ceeEEEecCCCCCCCcccccCccCCCCCCCCCCcccccccccccCEEecCCeEEEEeeccceeeCCCCccCCCEEEEeec
Confidence            5789999999999999999999999832        137899999764        455667788999999999999999


Q ss_pred             CC-------------CCCCCceeEEEEeec
Q 034318           81 PS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        81 ~D-------------GnaG~RiACGvI~~~   97 (98)
                      +|             ||||+|||||||+++
T Consensus       120 ~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~  149 (150)
T 1xso_A          120 ADDLGKGGNDESLKTGNAGGRLACGVIGYS  149 (150)
T ss_dssp             CCCTTCSSSTTHHHHTTCCCEEEEEECEEC
T ss_pred             CccccccccccccccCCCCCcEEEEEEEec
Confidence            98             899999999999986

>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A

Probab=99.91  E-value=1.4e-25  Score=162.34  Aligned_cols=81  Identities=23%  Similarity=0.409  Sum_probs=71.8

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|+++|.+.+|.++|+||||....        .|.||||++..         +.|..++|+|+++|+|||||||+
T Consensus        44 ~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~  123 (156)
T 1to4_A           44 KHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHE  123 (156)
T ss_dssp             EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCBSSGGGBCTTSEEEEES
T ss_pred             cEeEEEecCCCCCCChhhccCcCCCCCCCcCCcccCCCccccccCeEECCCceEEEEEEecceecCCCCccCCCEEEEee
Confidence            57899999999999999999999998321        37899998764         66788889999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||+|+|||||||+++
T Consensus       124 ~~DD~g~g~~~~s~~tGnaG~RiACGvI~~~  154 (156)
T 1to4_A          124 NEDDLGRGGHELSKVTGNAGGRLACGVVGLA  154 (156)
T ss_dssp             SCCCTTCSCSTTHHHHTTCCSEEEEEECEEC
T ss_pred             cCccccccccccccccCCCCCcEEEEEEEee
Confidence            997             899999999999986

>3ce1_A Superoxide dismutase [CU-ZN]; greek-KEY beta barrel, antioxidant, copper, metal-binding, oxidoreductase, zinc; 1.20A {Cryptococcus liquefaciens}

Probab=99.91  E-value=1.8e-25  Score=163.75  Aligned_cols=82  Identities=26%  Similarity=0.419  Sum_probs=72.4

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|++||.+.+|.++|+||||...        ..|.||||++.         .+.|..++|.|+++|+|||||||+
T Consensus        46 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~L~g~~siiGRSiVIHa  125 (168)
T 3ce1_A           46 QRGFHVHQFGDNSNGCTSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHA  125 (168)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSCCTTEEEEEEBCTTSCEEEEEEESSCBSSSTTBCTTSEEEEES
T ss_pred             eeeEEEecCCcCCCChhhccCccCCCCCCCCCCCcCCCcCCcccCeEECCCCcEEEEecccceEeCCCCCcCCCEEEEee
Confidence            4789999999999999999999999832        23789999875         367788899999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeecC
Q 034318           80 NPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      ++|             ||||+|||||||++++
T Consensus       126 ~~DD~g~g~~~~s~~tGnaG~RiACGvI~~~~  157 (168)
T 3ce1_A          126 GEDDLGKTDHPESLKTGNAGARSACGVIGIAA  157 (168)
T ss_dssp             SCCCTTCSSSTTHHHHCSCCSEEEEEECEEEC
T ss_pred             cCccccccccccccccCCCCCcEEEEEEEecc
Confidence            998             7999999999999864

>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens}

Probab=99.89  E-value=3.7e-24  Score=163.07  Aligned_cols=82  Identities=23%  Similarity=0.338  Sum_probs=70.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCC--CCCCCCCCceEE--------eecCeEEeeCCCCccccEEEEecCCC----
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLD--MLHCVGIPALAS--------HEHSSVALSGPDSVIGRGLVLHSNPS----   82 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--~~H~gd~p~~~~--------~~d~~i~L~G~~siiGRalVIHa~~D----   82 (98)
                      .+.+|+|++||.+.+|.++|+||||...  ..|+||||++..        +.|..++|+|+++|+|||||||+++|    
T Consensus        92 ~HGfHIHe~Gd~s~gc~SAGgHfNP~~~~H~~H~GDLgni~~~~G~a~~~~~d~~i~L~g~~sIiGRSiVIHa~~DD~g~  171 (222)
T 2jlp_A           92 SRAIHVHQFGDLSQGCESTGPHYNPLAVPHPQHPGDFGNFAVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGR  171 (222)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTTCCCTTCSTTEEEEEEEETTBEEEEEEEESCBSSSTTBCTTSEEEEESSCCCTTC
T ss_pred             ceeEEEECCCCCCCCcccccCCCCCCCCCCcccccccccEEecCCcEEEEEEccccccCCCCccCCCEEEEeecCccccc
Confidence            5899999999999999999999999832  247899999765        33445667899999999999999997    


Q ss_pred             ---------CCCCCceeEEEEeecC
Q 034318           83 ---------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        83 ---------GnaG~RiACGvI~~~a   98 (98)
                               ||+|+|||||||++++
T Consensus       172 g~~~~S~~tGnaG~RiACGVI~~s~  196 (222)
T 2jlp_A          172 GGNQASVENGNAGRRLACCVVGVCG  196 (222)
T ss_dssp             SSSTTHHHHTTCCCEEEEEECEECC
T ss_pred             CccccccccCCCCceEEEEEEEeec
Confidence                     8999999999999864

>1do5_A Human copper chaperone for superoxide dismutase domain II; beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1

Probab=99.89  E-value=2.9e-24  Score=155.24  Aligned_cols=79  Identities=20%  Similarity=0.318  Sum_probs=66.8

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|++||.+.+|.++|+||||....        .|.||||++..         +.|..++|+   +|+|||||||+
T Consensus        43 ~hg~HIHe~Gd~s~~c~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~---~iiGRslVIH~  119 (154)
T 1do5_A           43 LHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDE  119 (154)
T ss_dssp             EEEEEEESCCCCTTGGGTTCSBCCTTCCCCCCTTCSSSCTTEEEEEEECTTSEEEEEEEESSCCHH---HHTTSEEEEES
T ss_pred             ceeEEEeecCCCCCCcccCcCccCCCCCCCCCCCcccCccccccCeEecCCceEEEEEEccccccc---ccCCeEEEEEe
Confidence            47899999999999999999999998322        27899999865         445555554   89999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeecC
Q 034318           80 NPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      ++|             ||+|+|||||||+.+|
T Consensus       120 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~sA  151 (154)
T 1do5_A          120 GEDDLGRGGHPLSKITGNSGERLACGIIARSA  151 (154)
T ss_dssp             SCCCTTCSCSTTTTTTTTCCCEEEEEECEEEC
T ss_pred             CCccCCCCCCcccccCCCCCCcEEEEEEEeec
Confidence            988             7899999999999876

>1xtm_B Hypothetical superoxide dismutase-like protein YO; SOD, Cu-Zn SOD, SOD-like, superoxide dismutase mutants, STRU genomics, unknown function; 1.60A {Bacillus subtilis} PDB: 1xtl_B 1s4i_B 1u3n_A

Probab=99.89  E-value=1.6e-23  Score=154.15  Aligned_cols=81  Identities=12%  Similarity=0.168  Sum_probs=70.4

Q ss_pred             cccccccCCCCcc-ccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeC--CCCcc---cc
Q 034318           17 IGEISSNKYEQYL-SGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSG--PDSVI---GR   73 (98)
Q Consensus        17 ~re~~~~~~gdfs-sg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G--~~sii---GR   73 (98)
                      .+.+|+|+++|.+ .+|.++|+||||.-.        ..|.||||++.         .+.|..++|++  +++|+   ||
T Consensus        61 ~hg~HIHe~Gd~s~~~c~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~l~~~~~~sii~~~GR  140 (175)
T 1xtm_B           61 SLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGS  140 (175)
T ss_dssp             EECEEEESSCCCCTTTCGGGCSBCCTTCCBSCTTCTTBCCTTBCCCEECCTTSCEEEEEEETTCBCCTTCTTBSSSTTCE
T ss_pred             cceEEEecCCccCCCChhhccCccCCCcCCCCCCCccccccccccCeEeCCCCeEEEEEEecceeecCCCccceecCCCc
Confidence            5889999999999 599999999999831        24899999975         46677788887  89999   99


Q ss_pred             EEEEecCCC-------CCCCCceeEEEEeec
Q 034318           74 GLVLHSNPS-------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        74 alVIHa~~D-------GnaG~RiACGvI~~~   97 (98)
                      |||||+++|       ||+|+|||||||+++
T Consensus       141 SiVIH~~~DD~~~~~tGnaG~RiACGvI~~~  171 (175)
T 1xtm_B          141 AFIIHEQADDYLTNPSGNSGARIVCGALLGN  171 (175)
T ss_dssp             EEEEESSCCCSSSTTTTTCCSEEEEEEECC-
T ss_pred             EEEEEcCCCCCCCCcCCCCCCcEEEEEEEec
Confidence            999999998       899999999999875

>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}

Probab=99.87  E-value=1.2e-22  Score=146.72  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=65.1

Q ss_pred             cccccccCCCCcccccc--------CCCCccCCCCCC--------CCCCCCCceEEeecCeEEe-------eCCCCcccc
Q 034318           17 IGEISSNKYEQYLSGTG--------LEIELYQPDLDM--------LHCVGIPALASHEHSSVAL-------SGPDSVIGR   73 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~--------sdgg~ynP~~~~--------~H~gd~p~~~~~~d~~i~L-------~G~~siiGR   73 (98)
                      .+.+|+|++||.+++|.        ++|+||||....        .|+||||+++...++..++       .+..+|+||
T Consensus        44 ~hGfHIHe~Gdc~~gc~~g~~~~~~SaGgHfnP~~~~~hg~p~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiGR  123 (154)
T 2aqm_A           44 YHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQR  123 (154)
T ss_dssp             EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTSSSCTTBCCCEEECTTSCEEEEEEETTCCCGGGGTTE
T ss_pred             cceEEEccCCccCCccccccccccccccCCCCCcccccCCCCCccCccccccCeEECCCceEEEEEEcCCcccccccCCc
Confidence            47899999999999886        999999998322        3799999987655544332       135689999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||+
T Consensus       124 siVIHa~~Dd~~~~s~~tGnaG~RiACGVI~  154 (154)
T 2aqm_A          124 SLMVHVGGDNYSDKPEPLGGGGARFACGVIE  154 (154)
T ss_dssp             EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             EEEEEecCCcccccccccCCCCCeEEEEEEC
Confidence            999999998         8999999999995

>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A

Probab=99.86  E-value=1.9e-22  Score=146.95  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=64.5

Q ss_pred             cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318           17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG   72 (98)
Q Consensus        17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG   72 (98)
                      .+.+|+|++||.+++        |.|+|+||||.. .        ..|.||||+++...++..++       .|.++|+|
T Consensus        53 ~HGfHIHe~Gdc~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~H~GDLgni~~~~~G~a~~~~~d~~~~gl~~iiG  132 (164)
T 2aqp_A           53 LHGFHIHENPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRG  132 (164)
T ss_dssp             EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred             ceeEEEecCCcccCcccCCcccccccccCccCCcCCCcCCCCCccccccCcccCeEECCCceEEEEEECCCcccccccCC
Confidence            478999999999975        569999999983 1        25899999988755543321       14579999


Q ss_pred             cEEEEecCCC---------CCCCCceeEEEEe
Q 034318           73 RGLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        73 RalVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      ||||||+++|         ||||+|||||||+
T Consensus       133 RslVIHa~~Dd~~~~p~~tGnaG~RiACGVI~  164 (164)
T 2aqp_A          133 HSIMIHTGGDNHSDHPAPLGGGGPRMACGVIK  164 (164)
T ss_dssp             EEEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             cEEEEEecCCcCCCCccccCCCCCcEEEEEeC
Confidence            9999999998         8999999999995

>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A

Probab=99.86  E-value=1.2e-22  Score=146.38  Aligned_cols=76  Identities=22%  Similarity=0.299  Sum_probs=63.4

Q ss_pred             cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEee---------cCeEEeeCCCCc
Q 034318           17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHE---------HSSVALSGPDSV   70 (98)
Q Consensus        17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~---------d~~i~L~G~~si   70 (98)
                      .+.+|+|++||.+++        |.|+|+||||.. .        ..|.||||+++...         |..++|   ++|
T Consensus        41 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~~~~i~l---~~i  117 (151)
T 1oal_A           41 EHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTL---KEL  117 (151)
T ss_dssp             EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCSSSCTTBCCCEEECTTSCBCCCEEETTCCH---HHH
T ss_pred             cceEEEccCCcCCCccccCcccccccccCCcCCCCCCCCCCCCccccccccccCeEECCCCeEEEEEEcCcCCh---hhc
Confidence            478999999999986        569999999983 1        24899999987644         444555   589


Q ss_pred             cccEEEEecCCC---------CCCCCceeEEEEe
Q 034318           71 IGRGLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        71 iGRalVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      +|||||||+++|         ||||+|||||||+
T Consensus       118 iGRslVIH~~~Dd~~~~p~~tGnaG~RiACGvI~  151 (151)
T 1oal_A          118 KGHAIMIHAGGDNHSDMPKALGGGGARVACGVIQ  151 (151)
T ss_dssp             TTCEEEEESSCCCSSSSSSGGGGCCSEEEEEECC
T ss_pred             CCeEEEEEecCCcCCCCccccCCCCCcEEEEEeC
Confidence            999999999998         8999999999995

>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*

Probab=99.86  E-value=2.3e-22  Score=145.38  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=64.0

Q ss_pred             cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318           17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG   72 (98)
Q Consensus        17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG   72 (98)
                      .+.+|+|++||.+++        |.++|+||||.. .        ..|+||||+++...++..++       .+.++|+|
T Consensus        44 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiG  123 (156)
T 1eqw_A           44 IHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKG  123 (156)
T ss_dssp             EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred             ceeEEECCCCcCCCcccCCcccccccccCccCCCCCCcCCCCCccccccccccCeEECCCCeEEEEEEcCccccccccCC
Confidence            478999999999975        569999999983 1        24899999987654443321       12478999


Q ss_pred             cEEEEecCCC---------CCCCCceeEEEEe
Q 034318           73 RGLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        73 RalVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      ||||||+++|         ||||+|||||||+
T Consensus       124 RsiVIH~~~Dd~~~~p~~tGnaG~RiACGvI~  155 (156)
T 1eqw_A          124 HSLMIHKGGDNYSDKPAPLGGGGARFACGVIE  155 (156)
T ss_dssp             EEEEEESSCCCSSSSSSSGGGCCSEEEEEEEC
T ss_pred             cEEEEeecCCccccCccccCCCCCcEEEEEEe
Confidence            9999999998         8999999999997

>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A

Probab=99.86  E-value=2.9e-22  Score=144.59  Aligned_cols=79  Identities=16%  Similarity=0.147  Sum_probs=63.9

Q ss_pred             cccccccCCCCcccc--------ccCCCCccCCCC-C-------CCCCCCCCceEEeecCeEEe-------eCCCCcccc
Q 034318           17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D-------MLHCVGIPALASHEHSSVAL-------SGPDSVIGR   73 (98)
Q Consensus        17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~-------~~H~gd~p~~~~~~d~~i~L-------~G~~siiGR   73 (98)
                      .+.+|+|+++|.+++        |.++|+||||.. .       ..|.||||+++...++..++       .+.++|+||
T Consensus        44 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiGR  123 (154)
T 1eso_A           44 EHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDK  123 (154)
T ss_dssp             EECEEEESSSCCCCBCCSSSCBTTGGGCSBCCTTCCCCCCCTTSSSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTTE
T ss_pred             cccEEEcCCCccCCcccCCccccccccccccCCcCCCcCCCCCCCCccccccCeEECCCCeEEEEEEccccccccccCCe
Confidence            478999999999986        458999999983 1       25899999987654443321       124689999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||+
T Consensus       124 siVIH~~~Dd~~~~p~~tGnaG~RiACGvI~  154 (154)
T 1eso_A          124 ALMVHVGGDNMSDQPKPLGGGGERYACGVIK  154 (154)
T ss_dssp             EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             EEEEEecCCccccCccccCCCCCcEEEEEEC
Confidence            999999998         8999999999995

>1pzs_A Superoxide dismutase [CU-ZN]; Cu-protein, beta core, antioxidant, metal binding, greek KEY barrel, oxidoreductase; 1.63A {Mycobacterium tuberculosis} SCOP: b.1.8.1

Probab=99.85  E-value=4e-22  Score=150.29  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=68.5

Q ss_pred             cccccccCCCCccc-----------cccCCCCccCCCC--CCCCCCCCCceEE---------eecCeEEeeCCCCccccE
Q 034318           17 IGEISSNKYEQYLS-----------GTGLEIELYQPDL--DMLHCVGIPALAS---------HEHSSVALSGPDSVIGRG   74 (98)
Q Consensus        17 ~re~~~~~~gdfss-----------g~~sdgg~ynP~~--~~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRa   74 (98)
                      .+-+|+|+++|.+.           +|.++|+||||.-  +..|.||||+++.         +.|..++|++..+|+|||
T Consensus        80 ~HGfHIHe~Gdcs~~~~~~~~G~~~~c~SAGgHfNP~~~~g~P~~GDLgni~v~~dG~a~~~~~d~~l~L~~~~siiGRS  159 (208)
T 1pzs_A           80 FHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTA  159 (208)
T ss_dssp             EECEEEESSCCCCSSBCCTTCCSCBTTGGGCSBCCCTTCCSSSCTTBCCCEEECTTSCCEEEEEESSCCHHHHHSTTCCE
T ss_pred             ceeEEEecCCcccCcccccccCcccCcccccCcCCCCCCCCCCccccCcCcEeCCCceEEEEEEeCCcccCCCCCCCCCE
Confidence            47899999999987           7899999999983  1248899999863         566777788888999999


Q ss_pred             EEEecCCC--------------------------CCCCCceeEEEEee
Q 034318           75 LVLHSNPS--------------------------PNPGPGVAWGVIGL   96 (98)
Q Consensus        75 lVIHa~~D--------------------------GnaG~RiACGvI~~   96 (98)
                      ||||+++|                          ||+|+|||||||+.
T Consensus       160 iVIHa~~Dd~~~~P~~~~~~~~~~~g~~~~s~~tGnaG~RiACGVI~~  207 (208)
T 1pzs_A          160 IIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS  207 (208)
T ss_dssp             EEEESSCCCTTCCCTTTCBCTTSCBSCCHHHHHHTTCCSEEEEEESBC
T ss_pred             EEEeecCcccccccccccccccccCCCcccccccCCCcccEEEEEEeC
Confidence            99999887                          48999999999975

>1z9n_A Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxidoreductase; HET: HEM; 1.50A {Haemophilus ducreyi}

Probab=99.84  E-value=8.7e-22  Score=145.30  Aligned_cols=79  Identities=20%  Similarity=0.214  Sum_probs=63.9

Q ss_pred             cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318           17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG   72 (98)
Q Consensus        17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG   72 (98)
                      .+.+|+|++||.+++        |.|+|+||||.. .        ..|+||||+++...++..++       .+.++|+|
T Consensus        66 ~HGfHIHe~Gdcs~g~~dG~~~~c~SaGgHfnP~~~~~Hg~P~~~~~H~GDLgni~~~~~G~a~~~~~d~~l~~l~~iiG  145 (177)
T 1z9n_A           66 LHGFHIHEKPSCEPKEKDGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLAEVKG  145 (177)
T ss_dssp             EECEEEESSSCCCCEECSSSEETTGGGCSBCCTTCCCCCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred             ceeEEEecCCccccccccCcccccccccCccCCCCCCCCCCCCCCCCccccccCeEECCCceEEEEEEecCcccccccCC
Confidence            478999999999975        569999999983 1        24899999987655443321       12478999


Q ss_pred             cEEEEecCCC---------CCCCCceeEEEEe
Q 034318           73 RGLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        73 RalVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      ||||||+++|         ||||+|||||||+
T Consensus       146 RSiVIHa~~DD~~~~p~~tGnaG~RiACGVI~  177 (177)
T 1z9n_A          146 HSLMIHAGGDNHSDHPAPLGGGGPRMACGVIK  177 (177)
T ss_dssp             EEEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             eEEEEEeCCCCCCCCccccCCCCCeEEEEEeC
Confidence            9999999998         8999999999995

>1ej8_A Lys7; beta barrel, copper chaperone for SOD, domain 2; 1.55A {Saccharomyces cerevisiae} SCOP: b.1.8.1

Probab=99.83  E-value=6.5e-22  Score=141.55  Aligned_cols=76  Identities=14%  Similarity=-0.018  Sum_probs=62.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEe-----eCCCCccccEEEEecCCC-------C
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVAL-----SGPDSVIGRGLVLHSNPS-------P   83 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L-----~G~~siiGRalVIHa~~D-------G   83 (98)
                      .+.+|+|++||.+.+|.|+|+||||. ...| |||||+.... ++..++     ....+|+|||||||+++|       +
T Consensus        51 ~HGfHIHe~Gd~s~g~~SaG~HfnP~-~~~h-GDLgni~~~~~~G~a~~~~~~~i~l~~iiGRslVVHa~~DD~~~~~~~  128 (140)
T 1ej8_A           51 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS  128 (140)
T ss_dssp             EEEEEEESCCCCTTGGGGSCSEEEEC-CSCE-EECEEEETTTTEEEEEEEEEESCCGGGTTTSEEEEEEECSCGGGSCSS
T ss_pred             eeEEEEcCCCCCCCCcccccCccCCC-CCcc-cccCCEEEecCCcEEEEEECCCcCcceeCCeEEEEECCCCcCCCCCCC
Confidence            47899999999999999999999999 7778 9999987655 433321     123589999999999999       3


Q ss_pred             CCCCceeEEEEe
Q 034318           84 NPGPGVAWGVIG   95 (98)
Q Consensus        84 naG~RiACGvI~   95 (98)
                      + ++|+|||||+
T Consensus       129 ~-s~RiACGVI~  139 (140)
T 1ej8_A          129 V-KDYSFLGVIA  139 (140)
T ss_dssp             C-CEEEEEEECB
T ss_pred             C-CceEEEEEEe
Confidence            4 4999999997

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.82  E-value=4.5e-22  Score=151.80  Aligned_cols=80  Identities=15%  Similarity=-0.009  Sum_probs=66.7

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEe-----eCCCCccccEEEEecCCC------CC
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVAL-----SGPDSVIGRGLVLHSNPS------PN   84 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L-----~G~~siiGRalVIHa~~D------Gn   84 (98)
                      .+.+|+|++||.+.+|.|+|+||||. +..| |||||+.... ++..++     ....+|+|||||||+++|      ++
T Consensus       128 ~hg~hiHe~Gd~~~g~~saG~h~np~-~~~h-GDlgni~~~~~~G~a~~~~~~~~~l~~iiGrs~vvh~~~Dd~~~~~~~  205 (249)
T 1jk9_B          128 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS  205 (249)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSEEEEC-CSCE-EECEECSSCTTCEEEEEEEEESCCHHHHTTSEEEEEEECSCGGGSSSS
T ss_pred             cEeEEEEeCCCCCCCcccccCCcCCC-CCCc-cccCCEEecCCCceEEEEECCCCCccccCCeEEEEECCCccCCCCCCC
Confidence            47899999999999999999999999 7778 9999987655 443321     122589999999999999      45


Q ss_pred             CCCceeEEEEeecC
Q 034318           85 PGPGVAWGVIGLDA   98 (98)
Q Consensus        85 aG~RiACGvI~~~a   98 (98)
                      +|+|+|||||+.+|
T Consensus       206 ~~~r~aCGvI~~~~  219 (249)
T 1jk9_B          206 VKDYSFLGVIARSA  219 (249)
T ss_dssp             CCEEEEEEECEECC
T ss_pred             CCCcEEEEEEeecc
Confidence            78999999999875

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.82  E-value=5.5e-22  Score=148.65  Aligned_cols=80  Identities=15%  Similarity=-0.015  Sum_probs=66.0

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEee-----CCCCccccEEEEecCCC----C--C
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVALS-----GPDSVIGRGLVLHSNPS----P--N   84 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L~-----G~~siiGRalVIHa~~D----G--n   84 (98)
                      .+.+|+|++||.+.+|.|+|+||||. +..| |||||+.... ++..+++     ...+|+|||||||+++|    |  .
T Consensus       127 ~hg~hiHe~Gd~~~g~~saG~h~np~-~~~h-GDlgni~~~~~~G~a~~~~~~~~~l~~iiGrs~vvh~~~Dd~~~~~~~  204 (222)
T 1qup_A          127 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS  204 (222)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSEEEEC-CSCE-EECEEETTEEEEEEEEEEEEESCCHHHHTTSEEEEEEECSCGGGCTTC
T ss_pred             cEeEEEcCCCCCCCCcccccCCcCCC-CCcc-CccCCEEecCCCcEEEEEECCCcCccccCCeEEEEEcCCccCCCCCCC
Confidence            47899999999999999999999999 7778 9999987655 4433211     22589999999999999    2  2


Q ss_pred             CCCceeEEEEeecC
Q 034318           85 PGPGVAWGVIGLDA   98 (98)
Q Consensus        85 aG~RiACGvI~~~a   98 (98)
                      .|+|+|||||+.+|
T Consensus       205 ~~~r~aCgvI~~~a  218 (222)
T 1qup_A          205 VKDYSFLGVIARSA  218 (222)
T ss_dssp             CCEEEEEEECEEEC
T ss_pred             CCCcEEEEEEEEec
Confidence            57999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	98
d1f1ga_	153	b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Bake	5e-04
d2c9va1	153	b.1.8.1 (A:1-153) Cu,Zn superoxide dismutase, SOD	7e-04
d1srda_	154	b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Spin	7e-04
d1xsoa_	150	b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Afri	0.002
d1to4a_	156	b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Bloo	0.002

>d1f1ga_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 153

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.7 bits (79), Expect = 5e-04
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 13/54 (24%)

Query: 56  SHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           S + S + L GP SV+GR +V+H             S  + N GP  A GVIGL
Sbjct: 98  SFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151

>d2c9va1 b.1.8.1 (A:1-153) Cu,Zn superoxide dismutase, SOD {Human (Homo sapiens) [TaxId: 9606]} Length = 153

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 13/48 (27%)

Query: 62  VALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           ++LSG   +IGR LV+H             S  + N G  +A GVIG+
Sbjct: 104 ISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151

>d1srda_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 154

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Spinach (Spinacia oleracea) [TaxId: 3562]

 Score = 34.3 bits (78), Expect = 7e-04
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 13/57 (22%)

Query: 53  ALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGL 96
           A A+   + + L+GP+SV+GR LV+H             S  + N G  +A GV+GL
Sbjct: 95  AEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGL 151

>d1xsoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 150

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 32.8 bits (74), Expect = 0.002
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 13/71 (18%)

Query: 39  YQPDLDMLHCVGIPALASHEHSSVALSGPDSVIGRGLVLH-------------SNPSPNP 85
           +  DL  +   G  A      S ++L GP+S+IGR  V+H             S  + N 
Sbjct: 78  HVGDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNA 137

Query: 86  GPGVAWGVIGL 96
           G  +A GVIG 
Sbjct: 138 GGRLACGVIGY 148

>d1to4a_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 156

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]

 Score = 32.7 bits (74), Expect = 0.002
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 13/50 (26%)

Query: 62  VALSGPDSVIGRGLVLH-------------SNPSPNPGPGVAWGVIGLDA 98
           ++L+G  S+IGR +V+H             S  + N G  +A GV+GL A
Sbjct: 106 ISLNGSHSIIGRSMVIHENEDDLGRGGHELSKVTGNAGGRLACGVVGLAA 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d1to4a_	156	Cu,Zn superoxide dismutase, SOD {Blood fluke (Schi	99.93
d1f1ga_	153	Cu,Zn superoxide dismutase, SOD {Baker's yeast (Sa	99.92
d1srda_	154	Cu,Zn superoxide dismutase, SOD {Spinach (Spinacia	99.92
d2c9va1	153	Cu,Zn superoxide dismutase, SOD {Human (Homo sapie	99.92
d1xsoa_	150	Cu,Zn superoxide dismutase, SOD {African clawed fr	99.92
d1do5a_	154	Copper chaperone for superoxide dismutase, C-termi	99.88
d1esoa_	154	Cu,Zn superoxide dismutase, SOD {Escherichia coli	99.87
d1eqwa_	155	Cu,Zn superoxide dismutase, SOD {Salmonella typhim	99.87
d1pzsa_	171	Cu,Zn superoxide dismutase, SOD {Mycobacterium tub	99.87
d2apsa_	155	Cu,Zn superoxide dismutase, SOD {Actinobacillus pl	99.86
d1oala_	151	Cu,Zn superoxide dismutase, SOD {Photobacterium le	99.86
d1ej8a_	140	Copper chaperone for superoxide dismutase, C-termi	99.78

>d1to4a_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]

Probab=99.93  E-value=7.1e-27  Score=167.01  Aligned_cols=81  Identities=25%  Similarity=0.427  Sum_probs=72.0

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCC---------CCCCCCceEE---------eecCeEEeeCCCCccccEEEEe
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDML---------HCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLH   78 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~---------H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIH   78 (98)
                      .+.+|+|+++|.+.+|.+.|+||||. +..         |+||||+++.         +.|..++|+|+++|+|||||||
T Consensus        44 ~hg~HIHe~Gd~s~~~~saGgH~nP~-~~~hg~~~~~~~h~GDlgni~~~~~G~~~~~~~d~~l~l~g~~~iiGRsiVIH  122 (156)
T d1to4a_          44 KHGFHVHEFGDTTNGCTSAGAHFNPT-KQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIH  122 (156)
T ss_dssp             EEEEEEESCCCCTTTTGGGCSBCCTT-CCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCBSSGGGBCTTSEEEEE
T ss_pred             ceeeEEcCCCccCCcccccccccccc-cccccCCCcccCccCccccEEeCCCceEEEEEECceeecCCcCCcCCcEEEEE
Confidence            47899999999999999999999998 433         7899998753         5667788889999999999999


Q ss_pred             cCCC-------------CCCCCceeEEEEeecC
Q 034318           79 SNPS-------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        79 a~~D-------------GnaG~RiACGvI~~~a   98 (98)
                      +++|             ||||+|||||||++++
T Consensus       123 ~~~Dd~~~~~~~~s~~~G~aG~RiACgvIg~a~  155 (156)
T d1to4a_         123 ENEDDLGRGGHELSKVTGNAGGRLACGVVGLAA  155 (156)
T ss_dssp             SSCCCTTCSCSTTHHHHTTCCSEEEEEECEECC
T ss_pred             CCCCccccCCcccccccCCCCceEEEEEEEEec
Confidence            9998             8999999999999986

>d1f1ga_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.5e-26  Score=164.36  Aligned_cols=80  Identities=29%  Similarity=0.434  Sum_probs=71.9

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCC---------CCCCCCceE---------EeecCeEEeeCCCCccccEEEEe
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDML---------HCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLH   78 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~---------H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIH   78 (98)
                      .+.+|+|++||.+.+|.+.|+||||. ...         |+||||+++         .++|..++|+|+++|+|||||||
T Consensus        42 ~hg~HIHe~Gd~~~~~~saGgH~nP~-~~~hg~~~~~~~h~GDL~ni~~~~~G~~~~~~~d~~l~L~g~~~iiGRSiVIH  120 (153)
T d1f1ga_          42 ERGFHIHEFGDATNGCVSAGPHFNPF-KKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIH  120 (153)
T ss_dssp             EEEEEEESCCCCTTTTGGGCSBCCTT-CCCCCCTTSSSSCTTEEEEEECCTTSCEEEEEEESSCCSSSTTCCTTSEEEEC
T ss_pred             eeeEEEeCCCCcCCCccccccccccc-cccccCCCcccccccccccEEeCCCCeEEEEEEccceEecCCCCCCCCEEEEE
Confidence            46799999999999999999999998 433         789999875         46788889999999999999999


Q ss_pred             cCCC-------------CCCCCceeEEEEeec
Q 034318           79 SNPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        79 a~~D-------------GnaG~RiACGvI~~~   97 (98)
                      +++|             ||||+|||||||+++
T Consensus       121 ~~~Dd~~~g~~~~s~~~GnaG~RiACgvI~~s  152 (153)
T d1f1ga_         121 AGQDDLGKGDTEESLKTGNAGPRPACGVIGLT  152 (153)
T ss_dssp             SSCCCTTCSSSTTHHHHTTCCCCCEEEECEEE
T ss_pred             ecCCccCCCCCccccccCCCCCeEEEEEEEec
Confidence            9998             899999999999986

>d1srda_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=99.92  E-value=5.9e-26  Score=161.53  Aligned_cols=80  Identities=26%  Similarity=0.444  Sum_probs=70.9

Q ss_pred             ccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEecC
Q 034318           18 GEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHSN   80 (98)
Q Consensus        18 re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa~   80 (98)
                      +.+|+|++||.+.+|.+.|+||||+...        .|+||||+++.         +.|..++|+|+++|+|||||||++
T Consensus        43 hg~HIHe~Gd~~~~~~saGgh~np~~~~hg~~~~~~~h~GDLgni~~~~~G~~~~~~~~~~l~L~g~~~iiGRSivIH~~  122 (154)
T d1srda_          43 HGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHEL  122 (154)
T ss_dssp             CCEEEESCCCCTTGGGGGCSBCCTTCCCCCCSSCSSCCSSBCCCCEECTTSEEEEEEEESSCCSSSTTCCTTCEEEEESS
T ss_pred             eeEEEecCCccCCCccccccccccccccccCCCccccccccccCeEECCCCeEEEEEEeCcEEeCCCCCCCCcEEEEecC
Confidence            6899999999999999999999998432        38899999753         566777889999999999999999


Q ss_pred             CC-------------CCCCCceeEEEEeec
Q 034318           81 PS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        81 ~D-------------GnaG~RiACGvI~~~   97 (98)
                      +|             ||||+|||||||+++
T Consensus       123 ~Dd~~~~~~~~s~~~g~aG~RiACgvI~~~  152 (154)
T d1srda_         123 EDDLGKGGHELSPTTGNAGGRLACGVVGLT  152 (154)
T ss_dssp             CCCTTCSCSSSTTTTCSCCCEEEEEECEEE
T ss_pred             CcccCCCCcccCcccCCCCceEEEEEEEee
Confidence            98             799999999999985

>d2c9va1 b.1.8.1 (A:1-153) Cu,Zn superoxide dismutase, SOD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.6e-26  Score=163.26  Aligned_cols=80  Identities=28%  Similarity=0.441  Sum_probs=71.3

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCC---------CCCCCCceE---------EeecCeEEeeCCCCccccEEEEe
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDML---------HCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLH   78 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~---------H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIH   78 (98)
                      .+.+|+|+++|.+.+|.+.|+||||. +..         |+||||+++         .+.+..++|+|+++|+|||||||
T Consensus        42 ~hg~HIHe~Gd~~~~~~saGgH~nP~-~~~Hg~~~~~~~h~GDL~ni~~~~~G~~~~~~~~~~l~L~g~~si~GRsvVIH  120 (153)
T d2c9va1          42 LHGFHVHEFGDNTAGCTSAGPHFNPL-SRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH  120 (153)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTT-CCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSSBSSGGGBCTTSEEEEE
T ss_pred             ceeEEEecCCCCCcCccccccccccc-CccccCCCcccCcccccccEEecCCCeEEEEEEeCceecCCCCccCCcEEEEe
Confidence            37999999999999999999999998 433         789999975         45667788899999999999999


Q ss_pred             cCCC-------------CCCCCceeEEEEeec
Q 034318           79 SNPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        79 a~~D-------------GnaG~RiACGvI~~~   97 (98)
                      +++|             ||+|+|||||||+++
T Consensus       121 ~~~Dd~~~g~~~~s~~~G~aG~RiACgvIg~~  152 (153)
T d2c9va1         121 EKADDLGKGGNEESTKTGNAGSRLACGVIGIA  152 (153)
T ss_dssp             SSCCCTTCSSSGGGGTTTTCCSEEEEEECEEC
T ss_pred             cCCcccccCCCccccccCCCCCeEEEEEEEEe
Confidence            9998             899999999999986

>d1xsoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.92  E-value=4.7e-26  Score=161.63  Aligned_cols=80  Identities=25%  Similarity=0.429  Sum_probs=71.1

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC---------CCCCCCCceE--------EeecCeEEeeCCCCccccEEEEec
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM---------LHCVGIPALA--------SHEHSSVALSGPDSVIGRGLVLHS   79 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~---------~H~gd~p~~~--------~~~d~~i~L~G~~siiGRalVIHa   79 (98)
                      .+.+|+|++||.+.+|.+.|+||||+ +.         .|+||||+++        .+.|..++|+|+++|+|||||||+
T Consensus        40 ~Hg~HIHe~Gd~~~~~~saGgHfnp~-~~~Hg~~~~~~~h~GDlgni~~~~g~~~~~~~~~~~~l~g~~~i~GrsvvIH~  118 (150)
T d1xsoa_          40 LHGFHIHVFGDNTNGCMSAGSHFNPE-NKNHGAPGDTDRHVGDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHE  118 (150)
T ss_dssp             EEEEEEESCCCCTTGGGGGCSBCCTT-CCCCCCTTCSSSCTTEEEEEEEBTTEEEEEEEESSCBSSSTTBCTTSEEEEES
T ss_pred             ceeEEEecCCCccccccccccccccc-CccCCCCCCCcCccCcccceEecCCeEEEEEEccccccCCccccCCcEEEEEe
Confidence            47899999999999999999999998 33         3789999875        356677788999999999999999


Q ss_pred             CCC-------------CCCCCceeEEEEeec
Q 034318           80 NPS-------------PNPGPGVAWGVIGLD   97 (98)
Q Consensus        80 ~~D-------------GnaG~RiACGvI~~~   97 (98)
                      ++|             ||||+|||||||+++
T Consensus       119 ~~Dd~~~g~~~~s~~~G~aG~RiACgvIg~s  149 (150)
T d1xsoa_         119 KADDLGKGGNDESLKTGNAGGRLACGVIGYS  149 (150)
T ss_dssp             SCCCTTCSSSTTHHHHTTCCCEEEEEECEEC
T ss_pred             cCCcccccCCccccccCCCCCeEEEEEEEeC
Confidence            998             899999999999986

>d1do5a_ b.1.8.1 (A:) Copper chaperone for superoxide dismutase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Copper chaperone for superoxide dismutase, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-23  Score=149.25  Aligned_cols=82  Identities=18%  Similarity=0.270  Sum_probs=66.4

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEEeecCeEEee------CCCCccccEEEEecCCC
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALASHEHSSVALS------GPDSVIGRGLVLHSNPS   82 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~~~d~~i~L~------G~~siiGRalVIHa~~D   82 (98)
                      .+.+|+|++||.+.+|.+.|+||||....        .|++|||+++...++..++.      ..++|+|||||||+++|
T Consensus        43 ~hg~HIHe~Gd~s~~~~s~Ggh~np~~~~h~~~~~~~~h~GDLgni~~~~~G~~~~~~~~~~~~l~~iiGRSiVIH~~~D  122 (154)
T d1do5a_          43 LHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDEGED  122 (154)
T ss_dssp             EEEEEEESCCCCTTGGGTTCSBCCTTCCCCCCTTCSSSCTTEEEEEEECTTSEEEEEEEESSCCHHHHTTSEEEEESSCC
T ss_pred             ceEEEEecCCcCCCCccccccceecccccccCCCCCCCcccccCcEEeCCCceEEEEEEcCCccccccCCcEEEEEcCCc
Confidence            36899999999999999999999998322        27899999865444333221      22489999999999988


Q ss_pred             -------------CCCCCceeEEEEeecC
Q 034318           83 -------------PNPGPGVAWGVIGLDA   98 (98)
Q Consensus        83 -------------GnaG~RiACGvI~~~a   98 (98)
                                   ||+|+|||||||+.+|
T Consensus       123 d~~~g~~~~s~~~G~aG~RiaCgvI~rsa  151 (154)
T d1do5a_         123 DLGRGGHPLSKITGNSGERLACGIIARSA  151 (154)
T ss_dssp             CTTCSCSTTTTTTTTCCCEEEEEECEEEC
T ss_pred             ccccCCCccccccCCCCCcEEEEEEEeec
Confidence                         8999999999999886

>d1esoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.6e-23  Score=148.42  Aligned_cols=79  Identities=19%  Similarity=0.188  Sum_probs=65.4

Q ss_pred             cccccccCCCCcc--------ccccCCCCccCCCCC--------CCCCCCCCceEEeecCeEE-------eeCCCCcccc
Q 034318           17 IGEISSNKYEQYL--------SGTGLEIELYQPDLD--------MLHCVGIPALASHEHSSVA-------LSGPDSVIGR   73 (98)
Q Consensus        17 ~re~~~~~~gdfs--------sg~~sdgg~ynP~~~--------~~H~gd~p~~~~~~d~~i~-------L~G~~siiGR   73 (98)
                      .+.+|+|++||.+        .+|.++|+||||.-.        ..|+|||||++.-.|+.++       |++.++|+||
T Consensus        44 ~hg~HIHe~Gdc~~~~~~~~~~~~~SaGgHfNP~~~~~~~~~~~~~h~GDLgni~~~~dG~~~~~~~~~~l~~~~~i~GR  123 (154)
T d1esoa_          44 EHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDK  123 (154)
T ss_dssp             EECEEEESSSCCCCBCCSSSCBTTGGGCSBCCTTCCCCCCCTTSSSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTTE
T ss_pred             cceEEEcCCCcCCccccCCcccccccccceeccccccccCCCcccCccccccceEECCCCeEEEEEEeCCcccccccCCe
Confidence            4789999999975        678999999999731        2279999999876655432       4578899999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||.
T Consensus       124 svVIH~~~Dd~~~~~~~~G~aG~RiACgvI~  154 (154)
T d1esoa_         124 ALMVHVGGDNMSDQPKPLGGGGERYACGVIK  154 (154)
T ss_dssp             EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             EEEEECCCCcCCCCCccCCCCCceEEEEEeC
Confidence            999999998         8999999999994

>d1eqwa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Salmonella typhimurium [TaxId: 90371]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.87  E-value=2.3e-23  Score=148.61  Aligned_cols=78  Identities=18%  Similarity=0.270  Sum_probs=64.8

Q ss_pred             ccccccCCCCcccc--------ccCCCCccCCCCC---------CCCCCCCCceEEeecCeEE-------eeCCCCcccc
Q 034318           18 GEISSNKYEQYLSG--------TGLEIELYQPDLD---------MLHCVGIPALASHEHSSVA-------LSGPDSVIGR   73 (98)
Q Consensus        18 re~~~~~~gdfssg--------~~sdgg~ynP~~~---------~~H~gd~p~~~~~~d~~i~-------L~G~~siiGR   73 (98)
                      +.+|+|++||.+.+        |.+.++||||+..         ..|+|||||++...++.++       |++.++|+||
T Consensus        45 Hg~HIHe~Gdc~~~~~~~~~~~~~saggH~NP~~~~~hg~~~~~~~h~GDLgni~~~~~G~~~~~~~~~~l~~~~~i~GR  124 (155)
T d1eqwa_          45 HGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGH  124 (155)
T ss_dssp             ECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTTE
T ss_pred             eeEEEccCCCcCCCcccCCCcCCccccccccccccccCCCCCCCcCcccchhheEeCCCCeEEEEEEeCCcccccccCCe
Confidence            78999999998765        5679999999731         2389999999876665543       3578899999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||.
T Consensus       125 svVIH~~~Dd~~~~~~~~GnaG~RiACgvI~  155 (155)
T d1eqwa_         125 SLMIHKGGDNYSDKPAPLGGGGARFACGVIE  155 (155)
T ss_dssp             EEEEESSCCCSSSSSSSGGGCCSEEEEEEEC
T ss_pred             EEEEECCCCCCccCCCcCCCCcceEEEEEeC
Confidence            999999998         8999999999994

>d1pzsa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=1.9e-23  Score=151.94  Aligned_cols=80  Identities=14%  Similarity=0.139  Sum_probs=66.6

Q ss_pred             cccccccCCCCcccccc-----------CCCCccCCCC--CCCCCCCCCceEE---------eecCeEEeeCCCCccccE
Q 034318           17 IGEISSNKYEQYLSGTG-----------LEIELYQPDL--DMLHCVGIPALAS---------HEHSSVALSGPDSVIGRG   74 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~-----------sdgg~ynP~~--~~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRa   74 (98)
                      .+.+|+|+++|.++.|.           +.++||||..  ...|+|||||++.         +.+..++|.++++|+|||
T Consensus        43 ~HGfHIHe~Gdc~~~~~~~~gg~~~~~~saGgH~~~~~~~~~~h~GDLgNi~v~~dG~a~~~~~~~~~~L~g~~~i~Grs  122 (171)
T d1pzsa_          43 FHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTA  122 (171)
T ss_dssp             EECEEEESSCCCCSSBCCTTCCSCBTTGGGCSBCCCTTCCSSSCTTBCCCEEECTTSCCEEEEEESSCCHHHHHSTTCCE
T ss_pred             ceeEEEecCCcCCCCccccccccCCCCcCCCCccCCCCCCCCCCcccccceEeCCCCeEEEEEEeCceEecCCCcccceE
Confidence            47899999999887652           4788999874  2358999999864         455667778889999999


Q ss_pred             EEEecCCC--------------------------CCCCCceeEEEEee
Q 034318           75 LVLHSNPS--------------------------PNPGPGVAWGVIGL   96 (98)
Q Consensus        75 lVIHa~~D--------------------------GnaG~RiACGvI~~   96 (98)
                      ||||+++|                          ||||+|||||||+.
T Consensus       123 iVIHa~~DD~~~~P~~~~~~~~~~~g~~~~s~~tGnaG~RiACGVIg~  170 (171)
T d1pzsa_         123 IIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS  170 (171)
T ss_dssp             EEEESSCCCTTCCCTTTCBCTTSCBSCCHHHHHHTTCCSEEEEEESBC
T ss_pred             EEEecCCcccccCccccccccccccCCcccccccCCCCceEEEEEecc
Confidence            99999998                          79999999999974

>d2apsa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Actinobacillus pleuropneumoniae [TaxId: 715]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Actinobacillus pleuropneumoniae [TaxId: 715]

Probab=99.86  E-value=3.7e-23  Score=147.98  Aligned_cols=78  Identities=23%  Similarity=0.251  Sum_probs=63.9

Q ss_pred             ccccccCCCCcccc--------ccCCCCccCCCCCC---------CCCCCCCceEEeecCeEE-------eeCCCCcccc
Q 034318           18 GEISSNKYEQYLSG--------TGLEIELYQPDLDM---------LHCVGIPALASHEHSSVA-------LSGPDSVIGR   73 (98)
Q Consensus        18 re~~~~~~gdfssg--------~~sdgg~ynP~~~~---------~H~gd~p~~~~~~d~~i~-------L~G~~siiGR   73 (98)
                      +.+|+|+++|.+..        |.++|+||||....         .|+|||||++.-.++.++       |++.++|+||
T Consensus        45 hg~HIHe~gdc~~~~~~~~~~~~~SaGGH~NP~~~~~hg~p~~~~~h~GDLgni~~~~~G~~~~~~~~~~l~~~~~iiGR  124 (155)
T d2apsa_          45 HGFHIHQNPSCEPKEKDGKLVAGLGAGGHWDPKETKQHGYPWSDNAHLGDLPALFVEHDGSATNPVLAPRLKKLDEVKGH  124 (155)
T ss_dssp             ECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCSHHHHTTE
T ss_pred             eeEEEcccCCCCCccccCcccccccccCcccccccccCCCccccCCccCcccceEeCCCCeEEEEEEeCCCCccCCcCCE
Confidence            57899999998653        77899999997322         279999999876665443       4567889999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||+|.
T Consensus       125 SvVIH~~~Dd~~~~p~~~G~aG~RiaCgvI~  155 (155)
T d2apsa_         125 SLMIHEGGDNHSDHPAPLGGGGPRMACGVIK  155 (155)
T ss_dssp             EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred             EEEEEeCCCCCCCCccccCCCcceEEEEEeC
Confidence            999999998         8999999999994

>d1oala_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Photobacterium leiognathi [TaxId: 553611]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Cu,Zn superoxide dismutase, SOD
species: Photobacterium leiognathi [TaxId: 553611]

Probab=99.86  E-value=5.5e-23  Score=146.54  Aligned_cols=79  Identities=22%  Similarity=0.243  Sum_probs=62.5

Q ss_pred             cccccccCCCCccccc--------cCCCCccCCCC---------CCCCCCCCCceEEeecCeEEe------eCCCCcccc
Q 034318           17 IGEISSNKYEQYLSGT--------GLEIELYQPDL---------DMLHCVGIPALASHEHSSVAL------SGPDSVIGR   73 (98)
Q Consensus        17 ~re~~~~~~gdfssg~--------~sdgg~ynP~~---------~~~H~gd~p~~~~~~d~~i~L------~G~~siiGR   73 (98)
                      .+.+|+|++||.+++|        .++|+||||+-         ...|+||||+++...++..++      +..++|+||
T Consensus        41 ~Hg~HIHe~Gdcs~~~~~~~~~~~~saGgHfNP~~~~~hg~p~~~~~h~GDLgni~~~~~G~~~~~~~~~~~~l~~iiGR  120 (151)
T d1oala_          41 EHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGH  120 (151)
T ss_dssp             EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCSSSCTTBCCCEEECTTSCBCCCEEETTCCHHHHTTC
T ss_pred             ceeEEEecCCCcCccccCCccccccccccccccCCcccCCCCCccccccccccccEECCCCeEEEEEEccccccccCCCe
Confidence            3689999999998885        47999999972         123899999997655443321      122589999


Q ss_pred             EEEEecCCC---------CCCCCceeEEEEe
Q 034318           74 GLVLHSNPS---------PNPGPGVAWGVIG   95 (98)
Q Consensus        74 alVIHa~~D---------GnaG~RiACGvI~   95 (98)
                      |||||+++|         ||||+|||||||.
T Consensus       121 SvVIH~~~Dd~~~~p~~~GnaG~RiACgvI~  151 (151)
T d1oala_         121 AIMIHAGGDNHSDMPKALGGGGARVACGVIQ  151 (151)
T ss_dssp             EEEEESSCCCSSSSSSGGGGCCSEEEEEECC
T ss_pred             EEEEEcCCcCCCccccccCCCCceEEEEEeC
Confidence            999999998         9999999999984

>d1ej8a_ b.1.8.1 (A:) Copper chaperone for superoxide dismutase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cu,Zn superoxide dismutase-like
family: Cu,Zn superoxide dismutase-like
domain: Copper chaperone for superoxide dismutase, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=9.5e-21  Score=133.56  Aligned_cols=74  Identities=14%  Similarity=0.047  Sum_probs=62.2

Q ss_pred             cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEecCCC-----
Q 034318           17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHSNPS-----   82 (98)
Q Consensus        17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa~~D-----   82 (98)
                      .+.+|+|++||++.||.++|+||||+ +..| ||++++.         .+.+..++|   ++|||||||||+++|     
T Consensus        51 ~hg~hIHe~GDls~Gc~SaG~hfnp~-~~~h-Gdlgn~~~~~~G~~~~~~~~~~~~l---~~iiGRsiVIH~~~Dd~~~~  125 (140)
T d1ej8a_          51 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPT---WQLIGRSFVISKSLNHPENE  125 (140)
T ss_dssp             EEEEEEESCCCCTTGGGGSCSEEEEC-CSCE-EECEEEETTTTEEEEEEEEEESCCG---GGTTTSEEEEEEECSCGGGS
T ss_pred             cccEEEecCCCCCCChhhcccccCCc-CCCC-CcCCceeeccCCeEEEEEEcCCccc---eeecCcEEEEEecCCccccC
Confidence            57899999999999999999999999 7667 8888864         344455555   489999999999999     


Q ss_pred             -CCCCCceeEEEEe
Q 034318           83 -PNPGPGVAWGVIG   95 (98)
Q Consensus        83 -GnaG~RiACGvI~   95 (98)
                       .+.+.|+|||||+
T Consensus       126 ~~~~s~~~aCGVIA  139 (140)
T d1ej8a_         126 PSSVKDYSFLGVIA  139 (140)
T ss_dssp             CSSCCEEEEEEECB
T ss_pred             CCCCCCCEEEEEEE
Confidence             4456799999997