Citrus Sinensis ID: 034472

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MYRNHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTSSCFINLI
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHcccccccHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
myrnhhffpclhchphsYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYfhsisprpfmsktssCFINLI
Flexible Loop (DISEMBL)
MYRNHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFhsisprpfmsktsscfinli
Low Complexity Region (SEG)
MYRNhhffpclhchphSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTSSCFINLI
Disordered region (IsUnstruct)
****HHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFM*****CFI***
Disordered Region (DISOPRED)
******FFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSI**********SCFINL*
Disordered Region (DISEMBL)
MYRNHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTSSCFINLI
Disordered Region (DISPRO)
****HHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTSSCFI*LI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYRNHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTSSCFINLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
449534373	103	PREDICTED: uncharacterized LOC101211262	0.935	0.844	0.764	2e-34
449450634	95	PREDICTED: uncharacterized protein LOC10	0.892	0.873	0.788	4e-34
224102463	116	predicted protein [Populus trichocarpa]	0.870	0.698	0.814	4e-33
224110942	90	predicted protein [Populus trichocarpa]	0.935	0.966	0.770	2e-32
297739070	99	unnamed protein product [Vitis vinifera]	0.870	0.818	0.827	1e-31
255568842	122	conserved hypothetical protein [Ricinus	0.913	0.696	0.758	1e-29
356567646	102	PREDICTED: uncharacterized protein LOC10	0.827	0.754	0.743	2e-28
186478340	100	uncharacterized protein [Arabidopsis tha	0.870	0.81	0.716	3e-28
351734538	102	uncharacterized protein LOC100306139 [Gl	0.827	0.754	0.743	3e-28
116830729	102	unknown [Arabidopsis thaliana]	0.860	0.784	0.712	9e-28

>gi|449534373|ref|XP_004174137.1| PREDICTED: uncharacterized LOC101211262 [Cucumis sativus]

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/89 (76%), Positives = 79/89 (88%), Gaps = 2/89 (2%)

Query: 1  MYR--NHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVW 58
          MYR  +HHF PC HC PH+YIRMVQHLIERCLLLHMSRD+C+KALA+HA IRPL+TLTVW
Sbjct: 1  MYRPNSHHFLPCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALADHANIRPLITLTVW 60

Query: 59 RELQKENKDFFRAYFHSISPRPFMSKTSS 87
          +ELQKEN DFFRAYFH+ISP PF++K + 
Sbjct: 61 KELQKENSDFFRAYFHTISPNPFLAKFTG 89

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450634|ref|XP_004143067.1| PREDICTED: uncharacterized protein LOC101211262 [Cucumis sativus]

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 76/85 (89%), Gaps = 2/85 (2%)

Query: 1  MYR--NHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVW 58
          MYR  +HHF PC HC PH+YIRMVQHLIERCLLLHMSRD+C+KALA+HA IRPL+TLTVW
Sbjct: 1  MYRPNSHHFLPCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALADHANIRPLITLTVW 60

Query: 59 RELQKENKDFFRAYFHSISPRPFMS 83
          +ELQKEN DFFRAYFH+ISP PF+ 
Sbjct: 61 KELQKENSDFFRAYFHTISPNPFLG 85

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102463|ref|XP_002312687.1| predicted protein [Populus trichocarpa] gi|222852507|gb|EEE90054.1| predicted protein [Populus trichocarpa]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 72/81 (88%)

Query: 6  HFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKEN 65
          H  PCL CHPHSYIRMVQHLIERCLLL MSRDQCIKAL +HA IRP+VTLTVWRELQKEN
Sbjct: 8  HLLPCLRCHPHSYIRMVQHLIERCLLLQMSRDQCIKALYKHANIRPIVTLTVWRELQKEN 67

Query: 66 KDFFRAYFHSISPRPFMSKTS 86
          +DFF+AYFHS+ PRPF SK+ 
Sbjct: 68 RDFFQAYFHSVYPRPFTSKSK 88

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110942|ref|XP_002315690.1| predicted protein [Populus trichocarpa] gi|222864730|gb|EEF01861.1| predicted protein [Populus trichocarpa]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 74/87 (85%)

Query: 2  YRNHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWREL 61
          Y +HH  PCL CHPHSYIRMVQHLIERCLLLHMSRDQC+KALA+HA + PLVTLTVWREL
Sbjct: 4  YGHHHRLPCLRCHPHSYIRMVQHLIERCLLLHMSRDQCVKALAKHASVHPLVTLTVWREL 63

Query: 62 QKENKDFFRAYFHSISPRPFMSKTSSC 88
          Q+EN++FF AYFHSISPR F S    C
Sbjct: 64 QQENREFFHAYFHSISPRHFTSVLEGC 90

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739070|emb|CBI28559.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/81 (82%), Positives = 72/81 (88%)

Query: 4  NHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQK 63
          NHH  PCLHCHPHSYIR VQHLIERCLLL MSRDQCIKALAEHA I PLVTLTVWREL K
Sbjct: 3  NHHQLPCLHCHPHSYIRTVQHLIERCLLLRMSRDQCIKALAEHARIWPLVTLTVWRELLK 62

Query: 64 ENKDFFRAYFHSISPRPFMSK 84
          EN++FF+AYFH+ISPRP M +
Sbjct: 63 ENREFFQAYFHAISPRPCMRR 83

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568842|ref|XP_002525392.1| conserved hypothetical protein [Ricinus communis] gi|223535355|gb|EEF37030.1| conserved hypothetical protein [Ricinus communis]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 2/87 (2%)

Query: 1   MYRNH--HFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVW 58
           MY +H  H  PCLHCHPHSYIRMV HLIERCLLLHMSRDQCI+ALAEHA IRPLVTL VW
Sbjct: 35  MYHSHQDHLLPCLHCHPHSYIRMVHHLIERCLLLHMSRDQCIQALAEHASIRPLVTLAVW 94

Query: 59  RELQKENKDFFRAYFHSISPRPFMSKT 85
           REL+KEN DFF+AY  S+  RPF  K 
Sbjct: 95  RELEKENWDFFQAYSRSVPFRPFPRKA 121

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567646|ref|XP_003552028.1| PREDICTED: uncharacterized protein LOC100784875 [Glycine max]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 71/78 (91%), Gaps = 1/78 (1%)

Query: 8  FPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKD 67
           PCL+CHP+SYIRMVQ+LIERC+L HMS+DQC++ALAEHAGI+PLVT+TVW+ELQKENK+
Sbjct: 10 LPCLYCHPYSYIRMVQNLIERCILFHMSQDQCVRALAEHAGIKPLVTVTVWKELQKENKE 69

Query: 68 FFRAYFHSISPRP-FMSK 84
          FFRAY    +PRP FMS+
Sbjct: 70 FFRAYLQVTTPRPLFMSR 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478340|ref|NP_001117262.1| uncharacterized protein [Arabidopsis thaliana] gi|332190497|gb|AEE28618.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 67/81 (82%)

Query: 4  NHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQK 63
           H+  PCLHC PHSYIRMVQH+IERC+LL M+RD+C+KAL  HA I PLVTLTVWR LQ+
Sbjct: 9  QHNNLPCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQR 68

Query: 64 ENKDFFRAYFHSISPRPFMSK 84
          ENKDFF  Y H +SPRPF+SK
Sbjct: 69 ENKDFFETYGHFVSPRPFLSK 89

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734538|ref|NP_001238177.1| uncharacterized protein LOC100306139 [Glycine max] gi|255627659|gb|ACU14174.1| unknown [Glycine max]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 72/78 (92%), Gaps = 1/78 (1%)

Query: 8  FPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKD 67
           PCL+CHP+SYIRMVQ+LIERC+L HMS+DQCI+ALAEHAGI+PLVT+TVW+ELQKE+K+
Sbjct: 10 LPCLYCHPYSYIRMVQNLIERCMLFHMSQDQCIRALAEHAGIKPLVTVTVWKELQKESKE 69

Query: 68 FFRAYFHSISPRP-FMSK 84
          FFRAY   ++PRP FMS+
Sbjct: 70 FFRAYLQVVTPRPLFMSR 87

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830729|gb|ABK28322.1| unknown [Arabidopsis thaliana]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 57/80 (71%), Positives = 66/80 (82%)

Query: 4  NHHFFPCLHCHPHSYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQK 63
           H+  PCLHC PHSYIRMVQH+IERC+LL M+RD+C+KAL  HA I PLVTLTVWR LQ+
Sbjct: 9  QHNNLPCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQR 68

Query: 64 ENKDFFRAYFHSISPRPFMS 83
          ENKDFF  Y H +SPRPF+S
Sbjct: 69 ENKDFFETYGHFVSPRPFLS 88

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
TAIR|locus:2100676	95	AT3G55240 "AT3G55240" [Arabido	0.731	0.715	0.558	1.4e-18
TAIR|locus:2086992	88	AT3G28990 "AT3G28990" [Arabido	0.817	0.863	0.474	3.7e-16
TAIR|locus:2181838	91	AT5G02580 "AT5G02580" [Arabido	0.602	0.615	0.553	4.2e-15
TAIR|locus:4010713425	125	AT1G10657 "AT1G10657" [Arabido	0.677	0.504	0.546	1.2e-12
TAIR|locus:2076805	364	AT3G61700 "AT3G61700" [Arabido	0.591	0.151	0.545	4.6e-11
TAIR|locus:2039069	363	AT2G46420 "AT2G46420" [Arabido	0.591	0.151	0.545	5.9e-11
TAIR|locus:2146728	305	AT5G04090 "AT5G04090" [Arabido	0.591	0.180	0.472	1e-09
TAIR|locus:2076299	324	AT3G10250 "AT3G10250" [Arabido	0.591	0.169	0.472	1.2e-09
TAIR|locus:2077187	590	AT3G45800 "AT3G45800" [Arabido	0.602	0.094	0.385	4.9e-06
TAIR|locus:504956077	110	AT2G11623 "AT2G11623" [Arabido	0.559	0.472	0.326	0.00013

TAIR|locus:2100676 AT3G55240 "AT3G55240" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 38/68 (55%), Positives = 56/68 (82%)

Query:    17 SYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSI 76
             SYI MVQH+IE+CL+ HMS+++C++AL++HA I P++T TVW+EL+KENK+FF+AY    
Sbjct:     8 SYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFFKAYEERQ 67

Query:    77 SPRPFMSK 84
             S +  MS+
Sbjct:    68 SKQEQMSE 75

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0032502 "developmental process" evidence=IMP

TAIR|locus:2086992 AT3G28990 "AT3G28990" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 37/78 (47%), Positives = 55/78 (70%)

Query:    18 YIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSIS 77
             YI +VQH+IE CL  +MS+++C++AL+E+A I P++T TVW+EL KENKDFF  Y   + 
Sbjct:     9 YIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETYEQKLM 68

Query:    78 PRPFMSK--TSSCFINLI 93
              +  MS+  T+    N+I
Sbjct:    69 KKESMSEEETNQLIQNII 86

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2181838 AT5G02580 "AT5G02580" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 31/56 (55%), Positives = 45/56 (80%)

Query:    17 SYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAY 72
             SYI +V HLIE C++ +M +++C+ AL +HA I+P++T TVW+EL KENK+FF AY
Sbjct:    10 SYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAY 65

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:4010713425 AT1G10657 "AT1G10657" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 35/64 (54%), Positives = 43/64 (67%)

Query:    17 SYIRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHSI 76
             SYIRMVQH+IERC+LL M+RD+C+KAL  HA I PLVTLTV+  +        +   H I
Sbjct:    22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVFSYILGF-ASVLQKKLHDI 80

Query:    77 SPRP 80
              P P
Sbjct:    81 FPPP 84

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076805 AT3G61700 "AT3G61700" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 30/55 (54%), Positives = 41/55 (74%)

Query:    19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYF 73
             I +VQ+LIERCL L+M+RD+ +K L   A I P  T  VW++L++EN DFFRAY+
Sbjct:    55 IELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYY 109

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

TAIR|locus:2039069 AT2G46420 "AT2G46420" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 5.9e-11, P = 5.9e-11
 Identities = 30/55 (54%), Positives = 41/55 (74%)

Query:    19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYF 73
             I +VQ+LIERCL L+MSRD+ +K L   A I P  T  VW++L++EN +FFRAY+
Sbjct:    52 IELVQNLIERCLQLYMSRDEVVKTLLTRARIDPGFTTLVWQKLEEENAEFFRAYY 106

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2146728 AT5G04090 "AT5G04090" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 26/55 (47%), Positives = 42/55 (76%)

Query:    19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYF 73
             I++VQ+LIERCL L+M++ + +  L E A I P  T  VW++L++EN++FF+AY+
Sbjct:    14 IQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEENREFFKAYY 68

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076299 AT3G10250 "AT3G10250" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 26/55 (47%), Positives = 42/55 (76%)

Query:    19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYF 73
             I++VQ+LIERCL L+M++ + +  L E A I P  T  VW++L++EN++FF+AY+
Sbjct:    14 IQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEENREFFKAYY 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2077187 AT3G45800 "AT3G45800" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 22/57 (38%), Positives = 38/57 (66%)

Query:    19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAY-FH 74
             I  V++LIE C+  +MS ++ +  L ++  I   +T+T+W +LQKE+ +FF+ Y FH
Sbjct:   122 IDKVKNLIETCIYKYMSLEETVTYLEDNHNISHHLTITIWEQLQKESPEFFKKYYFH 178

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956077 AT2G11623 "AT2G11623" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 17/52 (32%), Positives = 33/52 (63%)

Query:    22 VQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYF 73
             V++LIE C+  +MS ++    + ++  I   +T  +W +LQKE+ +FF+ Y+
Sbjct:    46 VKNLIETCIYKYMSLEETETYVEDNHKISHHLTKPIWEQLQKESPEFFKKYY 97

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00081782 hypothetical protein (116 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	93
pfam09713	54	pfam09713, A_thal_3526, Plant protein 1589 of unkn	6e-23
TIGR01589	57	TIGR01589, A_thal_3526, uncharacterized plant-spec	9e-19

>gnl|CDD|192339 pfam09713, A_thal_3526, Plant protein 1589 of unknown function (A_thal_3526)

 Score = 82.8 bits (205), Expect = 6e-23
 Identities = 30/53 (56%), Positives = 43/53 (81%)

Query: 22 VQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFH 74
          VQ+LIERC+ L+MS+++C+ AL +HA I P  T TVW++L+KEN +FFRAY+ 
Sbjct: 1  VQNLIERCIQLYMSKEECVNALQKHANISPKFTSTVWKQLEKENPEFFRAYYT 53

This plant-specific family of proteins is defined by an uncharacterized region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana and Oryza sativa. The function of the proteins are unknown. Length = 54

>gnl|CDD|130650 TIGR01589, A_thal_3526, uncharacterized plant-specific domain TIGR01589

 Score = 72.2 bits (177), Expect = 9e-19
 Identities = 26/54 (48%), Positives = 36/54 (66%)

Query: 19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAY 72
          I +VQ+ IE C+  +MS+++ +  L E+AGI P  T  VW  L+KEN DFFR Y
Sbjct: 1  IDLVQNRIETCIQGYMSKEETVSFLFENAGISPKFTRFVWYLLEKENADFFRCY 54

This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa. Length = 57

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
TIGR01589	57	A_thal_3526 uncharacterized plant-specific domain	100.0
PF09713	54	A_thal_3526: Plant protein 1589 of unknown functio	100.0
smart00411	90	BHL bacterial (prokaryotic) histone like domain.	86.72
PF03918	148	CcmH: Cytochrome C biogenesis protein; InterPro: I	81.75

>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589

Probab=100.00  E-value=2.6e-37  Score=196.80  Aligned_cols=57  Identities=46%  Similarity=0.695  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHhcCCChhhHHHHHHHHHHhCHHHHHHHhhc
Q 034472           19 IRMVQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHS   75 (93)
Q Consensus        19 I~~VQ~LIErCLqlyMsk~Evv~~L~~~a~I~P~fT~~VW~~LEkeNpeFFkaY~~r   75 (93)
                      |++|||||||||++|||++|||++|+++|||+|+||++||++||+||||||+|||++
T Consensus         1 i~~Vq~lIE~Cl~~yMsk~E~v~~L~~~a~I~P~~T~~VW~~LekeN~eFF~aY~~~   57 (57)
T TIGR01589         1 IDLVQNRIETCIQGYMSKEETVSFLFENAGISPKFTRFVWYLLEKENADFFRCYKTH   57 (57)
T ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999999999999999999999999999999975

This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.

>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length

Probab=100.00  E-value=2.7e-36  Score=190.17  Aligned_cols=54  Identities=54%  Similarity=1.040  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHhcCCChhhHHHHHHHHHHhCHHHHHHHhhc
Q 034472           22 VQHLIERCLLLHMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRAYFHS   75 (93)
Q Consensus        22 VQ~LIErCLqlyMsk~Evv~~L~~~a~I~P~fT~~VW~~LEkeNpeFFkaY~~r   75 (93)
                      ||+||||||++|||++|||++|+++|||+|+||++||++||+||||||+||++|
T Consensus         1 Vq~lIErCl~~yMsk~E~v~~L~~~a~I~P~~T~~VW~~Le~eN~eFF~aY~~r   54 (54)
T PF09713_consen    1 VQNLIERCLQLYMSKEECVRALQKQANIEPVFTSTVWQKLEKENPEFFKAYYTR   54 (54)
T ss_pred             CchHHHHHHHHcCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHCHHHHHHhhcC
Confidence            799999999999999999999999999999999999999999999999999976

It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.

>smart00411 BHL bacterial (prokaryotic) histone like domain

Probab=86.72  E-value=1.7  Score=27.56  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=27.9

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHHHh
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQKE   64 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LEke   64 (93)
                      ||++|+++.++++.++...-...|++.|.+.
T Consensus         1 mtk~eli~~ia~~~~~~~~~v~~vl~~l~~~   31 (90)
T smart00411        1 MTKSELIDAIAEKAGLSKKDAKAAVDAFLEI   31 (90)
T ss_pred             CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            8999999999999999999999998877654

>PF03918 CcmH: Cytochrome C biogenesis protein; InterPro: IPR005616 Members of this family include NrfF, CcmH, CycL, Ccl2

Probab=81.75  E-value=2.9  Score=30.43  Aligned_cols=42  Identities=24%  Similarity=0.319  Sum_probs=32.2

Q ss_pred             Ccccccccchh-------hHHHHHHHHHHHHHhcCCHHHHHHHHHHhcC
Q 034472            7 FFPCLHCHPHS-------YIRMVQHLIERCLLLHMSRDQCIKALAEHAG   48 (93)
Q Consensus         7 ~~~c~~~~p~s-------~I~~VQ~LIErCLqlyMsk~Evv~~L~~~a~   48 (93)
                      .+-|..|+..+       ...-..+.|.+=|+..+|++||++.+-.+.|
T Consensus        40 ~LrCp~Cq~qsi~~s~a~~A~dmR~~I~~~l~~G~s~~eI~~~~v~rYG   88 (148)
T PF03918_consen   40 ELRCPVCQNQSIADSNAPIARDMRREIREMLAEGKSDEEIIDYFVERYG   88 (148)
T ss_dssp             CCE-TTTTS-CTTT--SHHHHHHHHHHHHHHHHT--HHHHHHHHHHHHT
T ss_pred             cccCCCCCCCchhhcCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcC
Confidence            47799998655       5566778899999999999999999999987

; PDB: 2KW0_A 2HL7_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
1b8z_A	90	Protein (histonelike protein HU); thermostable DNA	82.46
2es9_A	115	Putative cytoplasmic protein; structural genomics,	81.36
1mul_A	90	NS2, HU-2, DNA binding protein HU-alpha; histone-l	80.37
2di0_A	71	Activating signal cointegrator 1 complex subunit 2	80.19

>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A

Probab=82.46  E-value=2.3  Score=26.46  Aligned_cols=30  Identities=17%  Similarity=0.277  Sum_probs=25.6

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQK   63 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LEk   63 (93)
                      ||++|+++.++++.++...-...|++.+-+
T Consensus         1 mtk~eli~~ia~~~~ls~~~~~~~l~~~~~   30 (90)
T 1b8z_A            1 MNKKELIDRVAKKAGAKKKDVKLILDTILE   30 (90)
T ss_dssp             CCHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence            899999999999999999888777766554

>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A

Probab=81.36  E-value=1.3  Score=30.89  Aligned_cols=37  Identities=30%  Similarity=0.579  Sum_probs=27.5

Q ss_pred             HHHHHHHHhcCCChhhHHHH--HHHHH-------HhCHHHHHHHhh
Q 034472           38 QCIKALAEHAGIRPLVTLTV--WRELQ-------KENKDFFRAYFH   74 (93)
Q Consensus        38 Evv~~L~~~a~I~P~fT~~V--W~~LE-------keNpeFFkaY~~   74 (93)
                      +-|.+=-+|-|-+|+||..|  |.+=-       =.|||||..|..
T Consensus        55 ~dv~aRg~qegWn~gFT~k~~gWAek~esGer~vIKnPEyFstYM~  100 (115)
T 2es9_A           55 EVVVARGEQEGWNPEFTKKVAGWAEKVASGNRILIKNPEYFSTYMQ  100 (115)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCSSGGGSCHHHH
T ss_pred             HHHHHhcccccCChhHHHHHHHHHHHhccCCeeeecChHHHHHHHH
Confidence            34455568899999999987  54322       269999999965

>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A

Probab=80.37  E-value=3.1  Score=25.88  Aligned_cols=30  Identities=20%  Similarity=0.221  Sum_probs=25.1

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQK   63 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LEk   63 (93)
                      ||++|+++.++++.++...-...|.+.|-+
T Consensus         1 m~k~eli~~ia~~~~ls~~~~~~~l~~~~~   30 (90)
T 1mul_A            1 MNKTQLIDVIAEKAELSKTQAKAALESTLA   30 (90)
T ss_dssp             CCHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            899999999999999998877777765543

>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=80.19  E-value=3.1  Score=26.59  Aligned_cols=37  Identities=30%  Similarity=0.461  Sum_probs=30.2

Q ss_pred             hhHHHHHHH--------HHHHHHhc-CCHHHHHHHHHHhcCCChhhH
Q 034472           17 SYIRMVQHL--------IERCLLLH-MSRDQCIKALAEHAGIRPLVT   54 (93)
Q Consensus        17 s~I~~VQ~L--------IErCLqly-Msk~Evv~~L~~~a~I~P~fT   54 (93)
                      +.|..|+.|        |++||..| -|-|.+|.+|.+. +..|.+.
T Consensus        15 s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~-~LPp~L~   60 (71)
T 2di0_A           15 SLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEE-RLAPTLS   60 (71)
T ss_dssp             HHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTT-CCCTTTT
T ss_pred             HHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHcc-CCCHHHH
Confidence            367778776        89999999 8999999999885 6777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d1b8za_	90	HU protein {Thermotoga maritima [TaxId: 2336]}	87.43
d1mula_	90	HU protein {Escherichia coli [TaxId: 562]}	86.15
d1exea_	99	Transcription factor 1, TF1 {Bacteriophage SPO1 [T	85.88
d1huua_	90	HU protein {Bacillus stearothermophilus [TaxId: 14	83.79
d2es9a1	97	Hypothetical protein YoaC {Salmonella typhimurium	82.43

>d1b8za_ a.55.1.1 (A:) HU protein {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: HU protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.43  E-value=0.42  Score=28.81  Aligned_cols=29  Identities=17%  Similarity=0.273  Sum_probs=25.6

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQ   62 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LE   62 (93)
                      |||.|+++.|+++.|+...-...+++.+.
T Consensus         1 MnK~eli~~ia~~~~~s~~~~~~~~~~~~   29 (90)
T d1b8za_           1 MNKKELIDRVAKKAGAKKKDVKLILDTIL   29 (90)
T ss_dssp             CCHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence            99999999999999999988888876554

>d1mula_ a.55.1.1 (A:) HU protein {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: HU protein
species: Escherichia coli [TaxId: 562]

Probab=86.15  E-value=0.6  Score=28.21  Aligned_cols=29  Identities=21%  Similarity=0.233  Sum_probs=24.2

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQ   62 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LE   62 (93)
                      |||.|++++|+++.|+...-...+-+.+.
T Consensus         1 M~K~eli~~ia~~~~ltk~~~~~~v~~~~   29 (90)
T d1mula_           1 MNKTQLIDVIAEKAELSKTQAKAALESTL   29 (90)
T ss_dssp             CCHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhCcCHHHHHHHHHHHH
Confidence            99999999999999998887776665543

>d1exea_ a.55.1.1 (A:) Transcription factor 1, TF1 {Bacteriophage SPO1 [TaxId: 10685]}

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: Transcription factor 1, TF1
species: Bacteriophage SPO1 [TaxId: 10685]

Probab=85.88  E-value=0.35  Score=29.90  Aligned_cols=31  Identities=23%  Similarity=0.411  Sum_probs=27.6

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHHHh
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQKE   64 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LEke   64 (93)
                      |||.|+++.|+++.|+.+.-...|++.+.+.
T Consensus         1 M~K~eli~~ia~~~~ls~~~~~~~~~~~~~~   31 (99)
T d1exea_           1 MNKTELIKAIAQDTGLTQVSVSKMLASFEKI   31 (99)
T ss_dssp             CCTTHHHHHHHHHHCSCCTTHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999888776543

>d1huua_ a.55.1.1 (A:) HU protein {Bacillus stearothermophilus [TaxId: 1422]}

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: HU protein
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.79  E-value=0.87  Score=27.39  Aligned_cols=29  Identities=21%  Similarity=0.269  Sum_probs=24.4

Q ss_pred             CCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q 034472           34 MSRDQCIKALAEHAGIRPLVTLTVWRELQ   62 (93)
Q Consensus        34 Msk~Evv~~L~~~a~I~P~fT~~VW~~LE   62 (93)
                      |||.|+++.|++..|+...-...+-+.+-
T Consensus         1 MtK~dli~~ia~~~~~~~~~~~~~~~~~~   29 (90)
T d1huua_           1 MNKTELINAVAETSGLSKKDATKAVDAVF   29 (90)
T ss_dssp             CCHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence            99999999999999999887777665443

>d2es9a1 a.247.1.1 (A:11-107) Hypothetical protein YoaC {Salmonella typhimurium [TaxId: 90371]}

class: All alpha proteins
fold: YoaC-like
superfamily: YoaC-like
family: YoaC-like
domain: Hypothetical protein YoaC
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.43  E-value=0.53  Score=30.35  Aligned_cols=61  Identities=28%  Similarity=0.401  Sum_probs=36.4

Q ss_pred             ccchhhHHHHHHHHHHHHHh---cCCHHHHHHHHHHhcCCChhhHHHH--HHHH-H------HhCHHHHHHHhh
Q 034472           13 CHPHSYIRMVQHLIERCLLL---HMSRDQCIKALAEHAGIRPLVTLTV--WREL-Q------KENKDFFRAYFH   74 (93)
Q Consensus        13 ~~p~s~I~~VQ~LIErCLql---yMsk~Evv~~L~~~a~I~P~fT~~V--W~~L-E------keNpeFFkaY~~   74 (93)
                      +-|+|.=..--.=|=+||.-   =-|.++ |.+=-.|-|-+|+||.-|  |.+= +      =.|||||..|.+
T Consensus        18 s~P~sM~ESTAKGifKyLkelGVPas~~d-v~aRg~qegWn~gFT~K~~gWA~k~~sGerivIKnPEyFstYM~   90 (97)
T d2es9a1          18 SVPHSMDESTAKGILKYLHDLGVPVSPEV-VVARGEQEGWNPEFTKKVAGWAEKVASGNRILIKNPEYFSTYMQ   90 (97)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCCCCHHH-HHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCSSGGGSCHHHH
T ss_pred             CCCCccchHHHHHHHHHHHHcCCCCCHHH-HHHhcccccCChhHHHHHHHHHHHhccCCeeeecChHHHHHHHH
Confidence            34444333333334445432   124444 445568899999999987  5432 2      269999999975