Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value
Query 87
PLN02388 177
PLN02388, PLN02388, phosphopantetheine adenylyltra
7e-52
cd02164 143
cd02164, PPAT_CoAS, phosphopantetheine adenylyltra
5e-29
COG1019 158
COG1019, COG1019, Predicted nucleotidyltransferase
6e-14
PRK00777 153
PRK00777, PRK00777, phosphopantetheine adenylyltra
4e-13
cd02039 143
cd02039, cytidylyltransferase_like, Cytidylyltrans
3e-09
TIGR00125 66
TIGR00125, cyt_tran_rel, cytidyltransferase-like d
3e-08
pfam01467 148
pfam01467, CTP_transf_2, Cytidylyltransferase
3e-08
PRK01170
322
PRK01170, PRK01170, phosphopantetheine adenylyltra
1e-05
COG0615 140
COG0615, TagD, Cytidylyltransferase [Cell envelope
6e-05
cd02170 136
cd02170, cytidylyltransferase, cytidylyltransferas
1e-04
cd02165
192
cd02165, NMNAT, Nicotinamide/nicotinate mononucleo
0.004
>gnl|CDD|215218 PLN02388, PLN02388, phosphopantetheine adenylyltransferase
Back Hide alignment and domain information
Score = 159 bits (404), Expect = 7e-52
Identities = 66/84 (78%), Positives = 75/84 (89%)
Query: 3 MAILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML 62
M + +SV +S +SP NSYGAVVLGGTFDRLHDGHRLFLKA+AELARDRIV+GVCDGPML
Sbjct: 1 MVTVKDSVADSKLSPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPML 60
Query: 63 TNKQFAELIQPVDERMRNVEAYIK 86
+ KQFAELIQP++ERM NVE YIK
Sbjct: 61 SKKQFAELIQPIEERMHNVEEYIK 84
>gnl|CDD|173915 cd02164, PPAT_CoAS, phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes
Back Show alignment and domain information
Score = 100 bits (251), Expect = 5e-29
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V +GGTFDRLHDGH++ L + LA +++++GV +L NK ELI+P +ER+ N+
Sbjct: 2 VAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLKNKSLKELIEPYEERIANLHE 61
Query: 84 YIK 86
++
Sbjct: 62 FLV 64
The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD. Length = 143
>gnl|CDD|223950 COG1019, COG1019, Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Score = 62.3 bits (152), Expect = 6e-14
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V +GGTFDRLHDGH+ L+ + E+ DR+ +G+ + K+ E I+P + R+RN+
Sbjct: 8 VAVGGTFDRLHDGHKKLLEVAFEIG-DRVTIGLTSDELAKKKK-KEKIEPYEVRLRNLRN 65
Query: 84 YIK 86
+++
Sbjct: 66 FLE 68
>gnl|CDD|234834 PRK00777, PRK00777, phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Score = 60.2 bits (147), Expect = 4e-13
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAEL-----IQPVD 75
V +GGTFD LHDGHR L+ + EL R+ +G LT+ +FA+ ++P +
Sbjct: 1 MMKVAVGGTFDPLHDGHRALLRKAFELG-KRVTIG------LTSDEFAKSYKKHKVRPYE 53
Query: 76 ERMRNVEAYIK 86
R++N++ ++K
Sbjct: 54 VRLKNLKKFLK 64
>gnl|CDD|185678 cd02039, cytidylyltransferase_like, Cytidylyltransferase-like domain
Back Show alignment and domain information
Score = 49.7 bits (119), Expect = 3e-09
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
++ G F+ H GH +K + E A D +++ + P K+ + + ER+ ++
Sbjct: 2 GIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPK--KKRNKDPFSLHERVEMLKE 59
Query: 84 YIK 86
+K
Sbjct: 60 ILK 62
Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Length = 143
>gnl|CDD|232837 TIGR00125, cyt_tran_rel, cytidyltransferase-like domain
Back Show alignment and domain information
Score = 45.4 bits (108), Expect = 3e-08
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+ GTFD H GH L+ + EL D ++VGV N E + ++ER+ ++A
Sbjct: 2 VIFVGTFDPFHLGHLDLLERAKELF-DELIVGVG-SDQFVNPLKGEPVFSLEERLEMLKA 59
Query: 84 YIKG 87
Sbjct: 60 LKYV 63
Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Length = 66
>gnl|CDD|216517 pfam01467, CTP_transf_2, Cytidylyltransferase
Back Show alignment and domain information
Score = 47.4 bits (113), Expect = 3e-08
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 25 VLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
+ GGTFD +H GH L+ + EL D+IV D + + + +ER+ +E
Sbjct: 1 LFGGTFDPIHLGHLRLLEQAKELFDLDKIVGVPSDES---PHKDTKNLFSAEERLEMLEL 57
Query: 84 YIKG 87
++
Sbjct: 58 ALEV 61
This family includes: Cholinephosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase. Length = 148
>gnl|CDD|234912 PRK01170, PRK01170, phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Back Show alignment and domain information
Score = 41.3 bits (97), Expect = 1e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVC-DGPMLTNKQFAELIQPVDERMRNVE 82
V+GGTF +LH GH+ LK + E D +V+G+ D + NK + P ++R R +E
Sbjct: 3 TVVGGTFSKLHKGHKALLKKAIETG-DEVVIGLTSDEYVRKNKVYP---IPYEDRKRKLE 58
Query: 83 AYIK 86
+IK
Sbjct: 59 NFIK 62
>gnl|CDD|223688 COG0615, TagD, Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Back Show alignment and domain information
Score = 38.4 bits (90), Expect = 6e-05
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG---------PMLTNKQFAEL---I 71
V GTFD LH GH FL+ + +L + IVV D P++ +Q AE+ +
Sbjct: 4 VWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESL 63
Query: 72 QPVDE 76
+ VDE
Sbjct: 64 RYVDE 68
>gnl|CDD|173921 cd02170, cytidylyltransferase, cytidylyltransferase
Back Show alignment and domain information
Score = 37.7 bits (88), Expect = 1e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG---------PMLTNKQFAEL---I 71
V GTFD +H GH FL+ + +L D ++VGV P+L +Q AE+ +
Sbjct: 4 VYAAGTFDIIHPGHIRFLEEAKKLG-DYLIVGVARDETVAKIKRRPILPEEQRAEVVEAL 62
Query: 72 QPVDE 76
+ VDE
Sbjct: 63 KYVDE 67
The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates. Length = 136
>gnl|CDD|185680 cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase
Back Show alignment and domain information
Score = 33.8 bits (78), Expect = 0.004
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 25 VLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
+ GG+FD H GH + +A EL DR+++ P + A + R+ ++
Sbjct: 3 LFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPPHKPPKPA----SFEHRLEMLKL 58
Query: 84 YIKG 87
I+
Sbjct: 59 AIED 62
Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. Length = 192
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
87
PRK00777 153
phosphopantetheine adenylyltransferase; Provisiona
99.82
cd02164 143
PPAT_CoAS phosphopantetheine adenylyltransferase d
99.8
PLN02388 177
phosphopantetheine adenylyltransferase
99.77
COG1019 158
Predicted nucleotidyltransferase [General function
99.75
PRK00168 159
coaD phosphopantetheine adenylyltransferase; Provi
99.74
TIGR00125 66
cyt_tran_rel cytidyltransferase-related domain. Pr
99.74
PRK13964 140
coaD phosphopantetheine adenylyltransferase; Provi
99.74
KOG3351 293
consensus Predicted nucleotidyltransferase [Genera
99.72
cd02173 152
ECT CTP:phosphoethanolamine cytidylyltransferase (
99.72
COG1057
197
NadD Nicotinic acid mononucleotide adenylyltransfe
99.72
PRK01170
322
phosphopantetheine adenylyltransferase/unknown dom
99.71
TIGR01510 155
coaD_prev_kdtB pantetheine-phosphate adenylyltrans
99.69
cd02163 153
PPAT Phosphopantetheine adenylyltransferase. Phosp
99.69
cd02167 158
NMNAT_NadR Nicotinamide/nicotinate mononucleotide
99.68
cd02174 150
CCT CTP:phosphocholine cytidylyltransferase. CTP:p
99.68
PRK06973
243
nicotinic acid mononucleotide adenylyltransferase;
99.66
PF01467 157
CTP_transf_2: Cytidylyltransferase; InterPro: IPR0
99.64
PRK00071
203
nadD nicotinic acid mononucleotide adenylyltransfe
99.64
PRK07152
342
nadD putative nicotinate-nucleotide adenylyltransf
99.63
PRK08887
174
nicotinic acid mononucleotide adenylyltransferase;
99.63
cd02166
163
NMNAT_Archaea Nicotinamide/nicotinate mononucleoti
99.63
COG0615 140
TagD Cytidylyltransferase [Cell envelope biogenesi
99.62
PTZ00308 353
ethanolamine-phosphate cytidylyltransferase; Provi
99.62
TIGR01527
165
arch_NMN_Atrans nicotinamide-nucleotide adenylyltr
99.62
COG0669 159
CoaD Phosphopantetheine adenylyltransferase [Coenz
99.62
PLN02406
418
ethanolamine-phosphate cytidylyltransferase
99.62
TIGR01526
325
nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr
99.61
cd02168
181
NMNAT_Nudix Nicotinamide/nicotinate mononucleotide
99.61
TIGR00482
193
nicotinate (nicotinamide) nucleotide adenylyltrans
99.61
cd02165
192
NMNAT Nicotinamide/nicotinate mononucleotide adeny
99.6
cd02170 136
cytidylyltransferase cytidylyltransferase. The cyt
99.59
cd02039 143
cytidylyltransferase_like Cytidylyltransferase-lik
99.58
cd02171 129
G3P_Cytidylyltransferase glycerol-3-phosphate cyti
99.58
PRK01153
174
nicotinamide-nucleotide adenylyltransferase; Provi
99.56
PRK05379
340
bifunctional nicotinamide mononucleotide adenylylt
99.56
PLN02406
418
ethanolamine-phosphate cytidylyltransferase
99.55
cd02156 105
nt_trans nucleotidyl transferase superfamily. nt_t
99.54
PLN02413
294
choline-phosphate cytidylyltransferase
99.53
PLN02945
236
nicotinamide-nucleotide adenylyltransferase/nicoti
99.5
PTZ00308
353
ethanolamine-phosphate cytidylyltransferase; Provi
99.43
TIGR01518 125
g3p_cytidyltrns glycerol-3-phosphate cytidylyltran
99.43
KOG2803
358
consensus Choline phosphate cytidylyltransferase/P
99.38
cd02172 144
RfaE_N N-terminal domain of RfaE. RfaE is a protei
99.38
TIGR02199 144
rfaE_dom_II rfaE bifunctional protein, domain II.
99.38
cd09286
225
NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti
99.37
PRK08099
399
bifunctional DNA-binding transcriptional repressor
99.37
TIGR00124
332
cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP
99.35
COG2870 467
RfaE ADP-heptose synthase, bifunctional sugar kina
99.33
PRK13793
196
nicotinamide-nucleotide adenylyltransferase; Provi
99.33
PRK11316 473
bifunctional heptose 7-phosphate kinase/heptose 1-
99.23
KOG2803 358
consensus Choline phosphate cytidylyltransferase/P
99.16
cd02064
180
FAD_synthetase_N FAD synthetase, N-terminal domain
99.06
cd02169
297
Citrate_lyase_ligase Citrate lyase ligase. Citrate
99.06
COG1056
172
NadR Nicotinamide mononucleotide adenylyltransfera
99.02
smart00764
182
Citrate_ly_lig Citrate lyase ligase C-terminal dom
98.98
PRK13671
298
hypothetical protein; Provisional
98.95
KOG2804
348
consensus Phosphorylcholine transferase/cholinepho
98.74
PRK07143
279
hypothetical protein; Provisional
98.47
PRK05627
305
bifunctional riboflavin kinase/FMN adenylyltransfe
98.44
PF06574 157
FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof
98.19
TIGR00339
383
sopT ATP sulphurylase. Members of this family also
98.01
PF08218
182
Citrate_ly_lig: Citrate lyase ligase C-terminal do
97.95
TIGR00083
288
ribF riboflavin kinase/FMN adenylyltransferase. mu
97.91
PF05636
388
HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPr
97.67
PRK13670
388
hypothetical protein; Provisional
97.6
COG0196
304
RibF FAD synthase [Coenzyme metabolism]
97.44
COG1323
358
Predicted nucleotidyltransferase [General function
97.36
TIGR00018
282
panC pantoate--beta-alanine ligase. This family is
96.94
COG3053
352
CitC Citrate lyase synthetase [Energy production a
96.92
cd00560
277
PanC Pantoate-beta-alanine ligase. PanC Pantoate-b
96.91
PRK00380
281
panC pantoate--beta-alanine ligase; Reviewed
96.71
KOG3199
234
consensus Nicotinamide mononucleotide adenylyl tra
96.65
PLN02660
284
pantoate--beta-alanine ligase
96.64
PF01747
215
ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002
95.91
cd00517
353
ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also
95.59
COG2046
397
MET3 ATP sulfurylase (sulfate adenylyltransferase)
95.59
PRK04149
391
sat sulfate adenylyltransferase; Reviewed
95.48
PRK05537
568
bifunctional sulfate adenylyltransferase subunit 1
94.05
PRK13477
512
bifunctional pantoate ligase/cytidylate kinase; Pr
93.97
COG0414
285
PanC Panthothenate synthetase [Coenzyme metabolism
93.67
PF02569
280
Pantoate_ligase: Pantoate-beta-alanine ligase; Int
93.47
PLN02341 470
pfkB-type carbohydrate kinase family protein
87.05
COG1519 419
KdtA 3-deoxy-D-manno-octulosonic-acid transferase
82.37
KOG3042
283
consensus Panthothenate synthetase [Coenzyme trans
81.21
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Back Hide alignment and domain information
Probab=99.82 E-value=5e-20 Score=125.18 Aligned_cols=64 Identities=33% Similarity=0.670 Sum_probs=56.8
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|++|++||||||+|.||+.++++|++++ ++|+||+++|+.++.++. .++.|+++|++||+.|++
T Consensus 1 ~~~v~~gGtFDplH~GH~~ll~~A~~~~-d~livgi~~d~~~~~~K~-~~i~~~e~R~~~v~~~~~ 64 (153)
T PRK00777 1 MMKVAVGGTFDPLHDGHRALLRKAFELG-KRVTIGLTSDEFAKSYKK-HKVRPYEVRLKNLKKFLK 64 (153)
T ss_pred CcEEEEecccCCCCHHHHHHHHHHHHcC-CEEEEEEcCCccccccCC-CCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999998 799999999987743222 689999999999999986
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes
Back Show alignment and domain information
Probab=99.80 E-value=2.2e-19 Score=121.06 Aligned_cols=65 Identities=42% Similarity=0.831 Sum_probs=57.3
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
+|++||||||+|.||+.++.+|++++.++++||+++++++++|.....+.|+++|++++++|+++
T Consensus 1 ~v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~~k~~~~~i~s~e~R~~~l~~~l~~ 65 (143)
T cd02164 1 KVAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLKNKSLKELIEPYEERIANLHEFLVD 65 (143)
T ss_pred CEEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcccCCCCCCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999998778999999998776664445789999999999999863
The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
>PLN02388 phosphopantetheine adenylyltransferase
Back Show alignment and domain information
Probab=99.77 E-value=1.4e-18 Score=120.98 Aligned_cols=83 Identities=78% Similarity=1.270 Sum_probs=74.0
Q ss_pred cccccccccCCCCCCCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 4 AILDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
.--.|+++.++.++.+.+..|++|||||.+|.||..|+.+|++++.+.++||+++++.+.++.....+.|+++|.+.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~~ 81 (177)
T PLN02388 2 VTVKDSVADSKLSPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVEE 81 (177)
T ss_pred cccccccccccCCCCCcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHHH
Confidence 34467888889999999999999999999999999999999999867899999999987655446789999999999999
Q ss_pred HHh
Q 034677 84 YIK 86 (87)
Q Consensus 84 ~l~ 86 (87)
||+
T Consensus 82 fl~ 84 (177)
T PLN02388 82 YIK 84 (177)
T ss_pred HHH
Confidence 996
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Probab=99.75 E-value=1.5e-18 Score=118.23 Aligned_cols=67 Identities=36% Similarity=0.718 Sum_probs=61.4
Q ss_pred CCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 18 ~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
..+++++++|||||++|.||..||..|.+.| +++++|+|+|++++.+ +.+.+.|++.|++.|.+|+.
T Consensus 2 ~~kfm~vavGGTFd~LH~GHk~LL~~A~~~G-~~v~IGlTsDe~~k~~-k~~~i~p~~~R~~~l~~fl~ 68 (158)
T COG1019 2 KIKFMKVAVGGTFDRLHDGHKKLLEVAFEIG-DRVTIGLTSDELAKKK-KKEKIEPYEVRLRNLRNFLE 68 (158)
T ss_pred CccceEEEecccchhhhhhHHHHHHHHHHhC-CeEEEEEccHHHHHHh-ccccCCcHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999 7999999999999764 34889999999999999986
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.74 E-value=7.2e-18 Score=114.65 Aligned_cols=59 Identities=22% Similarity=0.437 Sum_probs=52.7
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|+++++||||||+|.||+.++++|++.+ |+|++++++++ .| .+..|+++|++|++.+++
T Consensus 1 ~~igi~gGsFdP~H~GHl~~~~~a~~~~-d~v~v~~~~~~---~k---~~~~~~~~R~~ml~~a~~ 59 (159)
T PRK00168 1 MKIAIYPGSFDPITNGHLDIIERASRLF-DEVIVAVAINP---SK---KPLFSLEERVELIREATA 59 (159)
T ss_pred CcEEEEeeecCCCCHHHHHHHHHHHHHC-CEEEEEECCCC---CC---CCCCCHHHHHHHHHHHHc
Confidence 5789999999999999999999999999 89999998764 23 468999999999999775
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain
Back Show alignment and domain information
Probab=99.74 E-value=1.1e-17 Score=97.69 Aligned_cols=62 Identities=31% Similarity=0.456 Sum_probs=52.3
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++++|+|||+|.||+.++++|++.+ +.++|++.+++..+..+. .++.+.++|.+|++++..
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~-~~~vv~i~~~~~~~~~~~-~~~~~~~~R~~~~~~~~~ 62 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELF-DELIVGVGSDQFVNPLKG-EPVFSLEERLEMLKALKY 62 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhC-CEEEEEECchHhccccCC-CCCCCHHHHHHHHHHhcc
Confidence 58999999999999999999999999 488899988765543321 389999999999998764
Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.74 E-value=1.1e-17 Score=112.77 Aligned_cols=59 Identities=32% Similarity=0.515 Sum_probs=52.6
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|+++++||||||+|.||+.++++|.+++ |+|+|+++.++ .| .+..|+++|++|+++.++
T Consensus 1 mkiai~~GSFDPih~GHl~ii~~A~~~~-D~v~v~v~~np---~K---~~~~s~e~R~~~l~~~~~ 59 (140)
T PRK13964 1 MKIAIYPGSFDPFHKGHLNILKKALKLF-DKVYVVVSINP---DK---SNASDLDSRFKNVKNKLK 59 (140)
T ss_pred CeEEEEeeeeCCCCHHHHHHHHHHHHhC-CEEEEEeccCC---CC---CCCCCHHHHHHHHHHHHc
Confidence 4689999999999999999999999999 89999998774 34 468999999999998875
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Probab=99.72 E-value=2.7e-18 Score=125.01 Aligned_cols=74 Identities=50% Similarity=0.886 Sum_probs=69.7
Q ss_pred CCCCCCCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 13 SNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 13 ~~~~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
.+.+|.+++.++.+|||||.+|.||..||..|++++.++++||+++++++++|..++.++|+++|++-|.+|++
T Consensus 134 e~~~~a~~~~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~kK~~~Eliepie~R~~~V~~Fl~ 207 (293)
T KOG3351|consen 134 EKSGPANKFMVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKKKVLKELIEPIEERKEHVSNFLK 207 (293)
T ss_pred ccccchhcceeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHHhHHHHHhhhHHHHHHHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999888878999999999999999986
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT)
Back Show alignment and domain information
Probab=99.72 E-value=1.3e-17 Score=113.18 Aligned_cols=61 Identities=36% Similarity=0.480 Sum_probs=53.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
++|+++|+||++|.||+.++++|++++ |+|+||+++|+.+. .|....|++|+++|.++|+.
T Consensus 3 ~iv~~~G~FD~~H~GHi~~L~~A~~lg-d~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~ 64 (152)
T cd02173 3 KVVYVDGAFDLFHIGHIEFLEKARELG-DYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLA 64 (152)
T ss_pred eEEEEcCcccCCCHHHHHHHHHHHHcC-CEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHh
Confidence 689999999999999999999999998 89999999998764 34334699999999999965
CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.72 E-value=3e-17 Score=115.80 Aligned_cols=65 Identities=22% Similarity=0.343 Sum_probs=58.0
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
.+++++|||||||+|.||+.++++|++..+ |+|++.++..++++.+ +...|.++|++|++.++++
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~p~k~~---~~~a~~~~R~~Ml~la~~~ 67 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVPPHKKK---KELASAEHRLAMLELAIED 67 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCCCCCCC---ccCCCHHHHHHHHHHHHhc
Confidence 478999999999999999999999999985 8999999999887543 5689999999999998864
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Back Show alignment and domain information
Probab=99.71 E-value=1.8e-17 Score=124.18 Aligned_cols=62 Identities=34% Similarity=0.655 Sum_probs=55.3
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
.+|++|||||++|.||+.||++|++++ |+|+||+++|+++.+++ ..+ .|+++|+++|++||+
T Consensus 1 ~~V~vgGTFD~lH~GH~~lL~~A~~~g-d~LiVgvt~D~~~~~~k-~~~-~~~e~R~~~v~~fl~ 62 (322)
T PRK01170 1 MITVVGGTFSKLHKGHKALLKKAIETG-DEVVIGLTSDEYVRKNK-VYP-IPYEDRKRKLENFIK 62 (322)
T ss_pred CEEEEccccccCChHHHHHHHHHHHcC-CEEEEEEccHHHHHhcC-CCC-CCHHHHHHHHHHHHH
Confidence 379999999999999999999999988 89999999999886433 256 999999999999985
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial
Back Show alignment and domain information
Probab=99.69 E-value=8.7e-17 Score=108.82 Aligned_cols=57 Identities=26% Similarity=0.454 Sum_probs=49.8
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
++++||||||+|.||+.++++|++.+ |+|+++|+.+ + .| .+..|+++|++|++..++
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~-d~v~~~~~~~-p--~k---~~~~~~~~R~~m~~~a~~ 57 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALF-DEVIVAVAKN-P--SK---KPLFSLEERVELIKDATK 57 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhC-CEEEEEEcCC-C--CC---CCCcCHHHHHHHHHHHHh
Confidence 58999999999999999999999998 8999999854 2 23 357899999999999875
This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
>cd02163 PPAT Phosphopantetheine adenylyltransferase
Back Show alignment and domain information
Probab=99.69 E-value=9.4e-17 Score=108.55 Aligned_cols=57 Identities=26% Similarity=0.493 Sum_probs=50.6
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++|||||||+|.||+.++++|.+.+ |+|++++++++ .| .+..+.++|++|++.+++
T Consensus 1 i~i~gGsFdP~H~GHl~l~~~a~~~~-d~v~v~~~~~~---~k---~~~~~~~~R~~ml~~a~~ 57 (153)
T cd02163 1 IAVYPGSFDPITNGHLDIIERASKLF-DEVIVAVAVNP---SK---KPLFSLEERVELIREATK 57 (153)
T ss_pred CEEEEeccCCCCHHHHHHHHHHHHHC-CEEEEEEcCCC---CC---CCCCCHHHHHHHHHHHHc
Confidence 47999999999999999999999998 89999998764 23 468999999999999875
Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins
Back Show alignment and domain information
Probab=99.68 E-value=1.5e-16 Score=108.47 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=53.2
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
++++||+|||+|.||+.++++|++.+ |+|+|+|++.+..+.+ +...|.++|++|++..+++
T Consensus 1 igl~~G~F~P~H~GHl~li~~a~~~~-d~v~vi~~~~~~~~~~---~~~~~~~~R~~mi~~a~~~ 61 (158)
T cd02167 1 IGIVFGKFAPLHTGHVYLIYKALSQV-DELLIIVGSDDTRDDA---RTGLPLEKRLRWLREIFPD 61 (158)
T ss_pred CEEEeeccCCCCHHHHHHHHHHHHHC-CEEEEEECCCCccccc---CCCCCHHHHHHHHHHHhcC
Confidence 47899999999999999999999998 8999999998765433 4567999999999998763
NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
>cd02174 CCT CTP:phosphocholine cytidylyltransferase
Back Show alignment and domain information
Probab=99.68 E-value=1.1e-16 Score=108.60 Aligned_cols=61 Identities=28% Similarity=0.421 Sum_probs=53.7
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHh-cCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~-~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+|+++|+||++|.||+.+|++|++++ +|+|+||+++|+.+. +|+ .|++|+++|.++|++.
T Consensus 3 ~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~--~pi~~~~eR~~~l~~~ 65 (150)
T cd02174 3 VRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKG--PPVMTEEERYEAVRHC 65 (150)
T ss_pred eEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCC--CCcCCHHHHHHHHHhc
Confidence 579999999999999999999999998 269999999998775 343 4999999999999854
CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.66 E-value=4.2e-16 Score=112.75 Aligned_cols=63 Identities=24% Similarity=0.368 Sum_probs=54.7
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
..+++++|||||||+|.||+.++++|.+... |+|++.++.+++.| ....+.++|++|++..++
T Consensus 20 ~~~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~pp~K-----~~~~~~~~Rl~M~~lAi~ 83 (243)
T PRK06973 20 RPRRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQPWQK-----ADVSAAEHRLAMTRAAAA 83 (243)
T ss_pred CCceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcCCCC-----CCCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999975 89999999887643 346799999999998876
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT)
Back Show alignment and domain information
Probab=99.64 E-value=3.3e-16 Score=101.92 Aligned_cols=59 Identities=31% Similarity=0.498 Sum_probs=42.5
Q ss_pred EEcccCCCCCHHHHHHHHHHHHHhcC-eEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 25 VLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 25 ~~gGtFDplH~GHl~ll~~a~~~~~d-~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+|||||||+|.||+.++++|++.++. .+++.++..++.+.+ .+..|+++|++|++.+++
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k~~---~~~~~~~~R~~ml~~~~~ 60 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHKDK---KPIFSFEERLEMLRAAFK 60 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHSTT---SSSSTHHHHHHHHHHHHT
T ss_pred CeeeEcCcccHHHHHHHHHHHHhccccccccccccccccccc---cccCcHHHHHHHHHHHHh
Confidence 68999999999999999999999942 355555444443322 378999999999999875
Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.64 E-value=1.4e-15 Score=106.40 Aligned_cols=65 Identities=26% Similarity=0.348 Sum_probs=54.7
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
.+++++|||||||+|.||+.+++.|++..+ +.+++.++..++.+.+ ....|.++|++|++.++++
T Consensus 3 ~~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~~~k~~---~~~~~~~~R~~m~~~a~~~ 68 (203)
T PRK00071 3 MKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPPHKPQ---KPLAPLEHRLAMLELAIAD 68 (203)
T ss_pred CcEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCC---CCCCCHHHHHHHHHHHhcC
Confidence 457899999999999999999999998774 7899999887765422 3578999999999998763
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Back Show alignment and domain information
Probab=99.63 E-value=1.1e-15 Score=114.24 Aligned_cols=63 Identities=19% Similarity=0.308 Sum_probs=53.4
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|++++|||||||+|.||+.+++.|.+..+ |+|++.|+.+++.|.+ ....+.++|++|++.+++
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~p~K~~---~~~~~~~~R~~m~~~a~~ 64 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYINPFKKK---QKASNGEHRLNMLKLALK 64 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCC---CCCCCHHHHHHHHHHHHh
Confidence 57899999999999999999999998854 8999999988775422 345666999999998875
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.63 E-value=1.1e-15 Score=105.41 Aligned_cols=60 Identities=17% Similarity=0.244 Sum_probs=48.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
+++++|||||||+|.||+.+++++ ... |+|++.|+...+. + +...|+++|++|++..+++
T Consensus 2 ~~i~ifGGSFDP~H~GHl~ia~~~-~~~-d~v~~vP~~~~~~--~---k~~~~~~~R~~M~~~ai~~ 61 (174)
T PRK08887 2 KKIAVFGSAFNPPSLGHKSVIESL-SHF-DLVLLVPSIAHAW--G---KTMLDYETRCQLVDAFIQD 61 (174)
T ss_pred CeEEEeCCCCCCCCHHHHHHHHHh-hcC-CEEEEEECCCCcc--c---CCCCCHHHHHHHHHHHHhc
Confidence 368999999999999999999985 344 8999999874321 2 2467999999999988763
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal
Back Show alignment and domain information
Probab=99.63 E-value=1.4e-15 Score=103.86 Aligned_cols=60 Identities=20% Similarity=0.266 Sum_probs=49.1
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++|||+|||+|.||+.++++|++.+ |+|+|++.++.... +. ..-.++++|++|++..++
T Consensus 1 ~~v~~G~FdP~H~GHl~~i~~a~~~~-d~l~v~v~s~~~~~-~~--~~~~~~~~R~~mi~~~~~ 60 (163)
T cd02166 1 RALFIGRFQPFHLGHLKVIKWILEEV-DELIIGIGSAQESH-TL--ENPFTAGERVLMIRRALE 60 (163)
T ss_pred CeEEeeccCCCCHHHHHHHHHHHHHC-CEEEEEecCCCCCC-CC--CCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999998 89999986654322 21 334788999999998765
This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Back Show alignment and domain information
Probab=99.62 E-value=4.2e-16 Score=105.11 Aligned_cols=61 Identities=31% Similarity=0.491 Sum_probs=51.7
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
.+|+.+||||.+|+||+++|++|.++| +.++|++..|+...+...+.|++|.++|.++|+.
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lG-d~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s 62 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLG-DELIVVVARDETVIKRKKRKPIMPEEQRAEVLES 62 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhC-CeEEEEEeccHHHHHhcCCCCCCCHHHHHHHHHc
Confidence 469999999999999999999999999 7888888777766431124899999999999875
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.62 E-value=1.3e-15 Score=115.31 Aligned_cols=66 Identities=30% Similarity=0.450 Sum_probs=56.7
Q ss_pred CCCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 17 PDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 17 ~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
|....++|+++|+||++|.||+.+|++|+++| |+|+|||++|+.+. .|....|+++.++|..+|..
T Consensus 188 ~~~~~kiv~~~G~FDl~H~GHi~~L~~A~~lg-d~LIVgV~sD~~v~~~Kg~~~Pi~~~~eR~~~v~a 254 (353)
T PTZ00308 188 PKPGDRIVYVDGSFDLFHIGHIRVLQKARELG-DYLIVGVHEDQVVNEQKGSNYPIMNLNERVLGVLS 254 (353)
T ss_pred CCCCCeEEEECCccCCCCHHHHHHHHHHHHhC-CEEEEEEcchHHhHhhcCCCCCCCCHHHHHHHHHh
Confidence 33446899999999999999999999999998 89999999998664 44434699999999999964
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.62 E-value=1.7e-15 Score=104.22 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=49.3
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
++++||+|||+|.||+.++++|++.+ |+|+|++.+++. ++|. ..-.+.++|++|++..++
T Consensus 1 rgl~~G~FdP~H~GHl~ii~~a~~~~-D~lii~i~s~~~-~~k~--~~p~~~~eR~~mi~~al~ 60 (165)
T TIGR01527 1 RGFYIGRFQPFHLGHLEVIKKIAEEV-DELIIGIGSAQE-SHTL--ENPFTAGERILMITQSLK 60 (165)
T ss_pred CeEEEeccCCCCHHHHHHHHHHHHHC-CEEEEEEcCCCC-CCCC--CCCCCHHHHHHHHHHHHh
Confidence 47899999999999999999999998 899999877654 2222 234567999999988775
In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.62 E-value=1.4e-15 Score=104.05 Aligned_cols=59 Identities=27% Similarity=0.455 Sum_probs=53.9
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
++++++.|||||+++||+.++++|..++ |+|+|+|..++. | .|..|+++|++++++.++
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~F-d~viVaV~~np~---K---~plFsleER~~l~~~~~~ 60 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALF-DEVIVAVAINPS---K---KPLFSLEERVELIREATK 60 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhc-cEEEEEEEeCCC---c---CCCcCHHHHHHHHHHHhc
Confidence 6799999999999999999999999999 899999988753 4 689999999999998764
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.62 E-value=1.3e-15 Score=117.43 Aligned_cols=63 Identities=33% Similarity=0.492 Sum_probs=56.1
Q ss_pred CCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 18 ~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
.++..+|+++||||++|.||+++|++|+++| |+|+|||++|+.+. +|+ .|++|+++|+++|+.
T Consensus 50 ~~~~~rV~~~G~FDllH~GH~~~L~qAk~lG-d~LIVGV~SDe~i~~~Kg--~PV~~~eER~~~v~a 113 (418)
T PLN02406 50 KKKPVRVYMDGCFDMMHYGHANALRQARALG-DELVVGVVSDEEIIANKG--PPVTPMHERMIMVSG 113 (418)
T ss_pred CCCceEEEEcCeeCCCCHHHHHHHHHHHHhC-CEEEEEEecChhhhccCC--CCcCCHHHHHHHHHh
Confidence 3445689999999999999999999999999 89999999998774 553 699999999999976
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type
Back Show alignment and domain information
Probab=99.61 E-value=2.2e-15 Score=112.29 Aligned_cols=62 Identities=23% Similarity=0.243 Sum_probs=53.5
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|+++++||||||+|.||+.++++|+.++ |+|+|+|++.++.+++ .+..|.++|++|++..++
T Consensus 1 ~~i~i~~GsFdP~H~GHl~ii~~a~~~~-d~v~v~~~~~~~~~~~---~~~~~~~~R~~~l~~~~~ 62 (325)
T TIGR01526 1 KTIGVVFGKFYPLHTGHIYLIYEAFSKV-DELHIVVGSLFYDSKA---KRPPPVQDRLRWLREIFK 62 (325)
T ss_pred CcEEEEeeccCCCCHHHHHHHHHHHHHC-CEEEEEECCCCcCccC---CCCCCHHHHHHHHHHHhc
Confidence 4689999999999999999999999998 8999999886544322 567899999999998875
E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain
Back Show alignment and domain information
Probab=99.61 E-value=2.5e-15 Score=104.51 Aligned_cols=60 Identities=22% Similarity=0.290 Sum_probs=51.3
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
++|||+|||+|.||+.++++|++.+ ++|+|++.+.+..+.+ +...++++|++|++..+++
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~-~~vii~i~s~~~~~~~---~~p~~~~eR~~mi~~~~~~ 61 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKA-KKVIILIGSARTARNI---KNPWTSEEREVMIEAALSD 61 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHC-CeEEEEeCCCCCCCCC---CCCcCHHHHHHHHHHHHhc
Confidence 6899999999999999999999999 6999999887554443 2458999999999998753
N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.61 E-value=2.2e-15 Score=104.77 Aligned_cols=59 Identities=20% Similarity=0.378 Sum_probs=50.5
Q ss_pred EEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 25 VLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 25 ~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+|||||||+|.||+.+++.|.+..+ |++++.++.+++.+.+ ....|+++|++|++..++
T Consensus 1 i~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~p~k~~---~~~~~~~~R~~m~~~a~~ 60 (193)
T TIGR00482 1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPPHKKT---YEAASSHHRLAMLKLAIE 60 (193)
T ss_pred CccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCC---CCCCCHHHHHHHHHHHHh
Confidence 5899999999999999999999874 8999999988876532 335799999999998875
This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.60 E-value=3.7e-15 Score=103.21 Aligned_cols=60 Identities=23% Similarity=0.346 Sum_probs=51.6
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
++++||||||+|.||+.+++.|.+.++ |+|++.++.++.. |+ ....|+++|++|++.+++
T Consensus 1 i~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~~~--k~--~~~~~~~~R~~m~~~~~~ 61 (192)
T cd02165 1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPPH--KP--PKPASFEHRLEMLKLAIE 61 (192)
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCC--CC--CCCCCHHHHHHHHHHHHc
Confidence 579999999999999999999999984 7999999877653 22 467899999999999875
Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
>cd02170 cytidylyltransferase cytidylyltransferase
Back Show alignment and domain information
Probab=99.59 E-value=3e-15 Score=98.55 Aligned_cols=60 Identities=37% Similarity=0.560 Sum_probs=53.1
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
|++++++|+||++|.||+.++++|.+++ +.++|+++.++.+. +|. .+++|.++|.+++++
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~-~~l~v~v~~~~~~~~~~~--~~~~~~~eR~~~l~~ 61 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLG-DYLIVGVARDETVAKIKR--RPILPEEQRAEVVEA 61 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhC-CEEEEEECCcHHHHhcCC--CCCCCHHHHHHHHHc
Confidence 5789999999999999999999999998 79999999997553 332 589999999999997
The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain
Back Show alignment and domain information
Probab=99.58 E-value=6.3e-15 Score=95.48 Aligned_cols=61 Identities=20% Similarity=0.344 Sum_probs=52.3
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
+++++|+|||+|.||+.++++|++.+.+.++|++.++++.+.+ ..+..++++|++|++.+.
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~R~~~l~~~~ 61 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKKR--NKDPFSLHERVEMLKEIL 61 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhcc--cccCCCHHHHHHHHHHhc
Confidence 4799999999999999999999999856899999888764321 257899999999999876
Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.58 E-value=4.6e-15 Score=96.90 Aligned_cols=62 Identities=29% Similarity=0.459 Sum_probs=53.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
|++++++|+||++|.||..++++|.+++ ++++++++.|+..+.+. ..++.|+++|.++++++
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~-~~l~v~v~~d~~~~~~~-~~~~~~~~~R~~~l~~~ 62 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALG-DKLIVAVSTDEFNAGKG-KKAVIPYEQRAEILESI 62 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhC-CEEEEEEeccHhHHhcC-CCCCCCHHHHHHHHHcC
Confidence 5789999999999999999999999998 68999999887544332 36899999999999764
Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.56 E-value=1.7e-14 Score=99.78 Aligned_cols=59 Identities=20% Similarity=0.294 Sum_probs=48.7
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCC-CcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG-PMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d-~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++|||+|||+|.||+.++++|++.+ |+|+|++.+. +..+. ..-.+.++|++|++..++
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~-d~v~v~i~s~~~~~~~----~~p~~~~~R~~mi~~a~~ 61 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEV-DELIIGIGSAQESHTL----KNPFTAGERILMIRKALE 61 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhC-CEEEEEecCCCCCCCC----CCCCCHHHHHHHHHHHHh
Confidence 68999999999999999999999987 8999988654 33222 234688999999998875
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Back Show alignment and domain information
Probab=99.56 E-value=1.7e-14 Score=108.12 Aligned_cols=64 Identities=19% Similarity=0.369 Sum_probs=54.6
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
..++++++||+|||+|.||+.++++|++.+ |+|+|+|++......++ . ..++++|++|++..++
T Consensus 4 ~~~~~~~~~G~F~P~H~GHl~~i~~a~~~~-d~l~v~i~s~~~~~~~~--~-~~~~~~R~~mi~~~~~ 67 (340)
T PRK05379 4 RRYDYLVFIGRFQPFHNGHLAVIREALSRA-KKVIVLIGSADLARSIK--N-PFSFEERAQMIRAALA 67 (340)
T ss_pred ccceEEEEeeccCCCCHHHHHHHHHHHHHC-CEEEEEEccCCCCCcCC--C-CCCHHHHHHHHHHHhh
Confidence 468899999999999999999999999999 89999998764433332 3 4899999999999875
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.55 E-value=1.1e-14 Score=112.37 Aligned_cols=67 Identities=27% Similarity=0.419 Sum_probs=59.8
Q ss_pred CCCCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 16 SPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 16 ~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
.|....++|+++|+||.+|.||+.+|++|.+++ +.|+||+++|+.+. +|+...|+++.++|..+|.+
T Consensus 246 ~p~~~~~iVyv~G~FDlfH~GHi~~L~~Ak~lG-d~LIVGV~sD~~v~~~KG~~~Pi~~~~ER~~~v~a 313 (418)
T PLN02406 246 GPGPDARIVYIDGAFDLFHAGHVEILRLARALG-DFLLVGIHTDQTVSAHRGAHRPIMNLHERSLSVLA 313 (418)
T ss_pred CCCCCCeEEEECCeeccCCHHHHHHHHHHHHhC-CEEEEEEeccHHHHHhcCCCCCCCCHHHHHHHHhc
Confidence 466788999999999999999999999999998 89999999998774 45445899999999999875
>cd02156 nt_trans nucleotidyl transferase superfamily
Back Show alignment and domain information
Probab=99.54 E-value=2.3e-14 Score=90.90 Aligned_cols=58 Identities=24% Similarity=0.297 Sum_probs=50.4
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHH
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+++||+|||+|.||+.++++|.+++ +.++++++.++..+.+ ..+.++++|.++++..
T Consensus 1 ~~~~~G~Fdp~H~GH~~l~~~a~~~~-d~~i~~i~~~~~~~~~---~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 1 KARFPGEPGYLHIGHAKLICRAKGIA-DQCVVRIDDNPPVKVW---QDPHELEERKESIEED 58 (105)
T ss_pred CEEeCCCCCCCCHHHHHHHHHHHHhC-CcEEEEEcCCCccccc---CChHHHHHHHHHHHHH
Confidence 37899999999999999999999999 7999999988775432 3589999999999864
nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
>PLN02413 choline-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.53 E-value=3.1e-14 Score=105.34 Aligned_cols=67 Identities=25% Similarity=0.407 Sum_probs=57.8
Q ss_pred CCCCCcccEEEEcccCCCCCHHHHHHHHHHHHHh-cCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 15 ISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 15 ~~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~-~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
.++..+-.+|++.|+||.+|.||+.+|++|.+++ ++.|||||++|+.+. .|+ .|+++.++|..+|+.
T Consensus 21 ~~~~~r~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KG--rPIm~~~ER~e~V~a 89 (294)
T PLN02413 21 SSPSDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKG--KTVMTEDERYESLRH 89 (294)
T ss_pred CCCCCCceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCC--CCCCCHHHHHHHHHh
Confidence 3445667899999999999999999999999997 479999999998774 443 699999999999875
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.50 E-value=1e-13 Score=99.48 Aligned_cols=70 Identities=10% Similarity=0.123 Sum_probs=51.7
Q ss_pred CCCCCCCcccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeE-----EEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 13 SNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRI-----VVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 13 ~~~~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~v-----ivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
...++++...+.++||||||+|.||+.+++.|.+... +.+ ++.++.++.. | ....+.++|++|++..++
T Consensus 14 ~~~~~~~~~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~--k---~~~~~~~~Rl~Ml~lai~ 88 (236)
T PLN02945 14 ANSTGPRTRVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYK--K---KGLASAEHRIQMCQLACE 88 (236)
T ss_pred hcCccCCceEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccc--c---CCCCCHHHHHHHHHHHhc
Confidence 3567777777889999999999999999999988863 443 2333333332 2 346799999999998775
Q ss_pred C
Q 034677 87 G 87 (87)
Q Consensus 87 ~ 87 (87)
+
T Consensus 89 ~ 89 (236)
T PLN02945 89 D 89 (236)
T ss_pred C
Confidence 3
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.43 E-value=3.1e-13 Score=102.34 Aligned_cols=63 Identities=29% Similarity=0.370 Sum_probs=55.4
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHHH
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+..+|++.|+||.+|.||..++++|.+++ +.|+||+++|+.+. +|. .|+++.++|.++|+.+
T Consensus 9 ~~~~~v~~~G~FD~vH~GH~~~L~qAk~~g-~~Livgv~~d~~i~~~K~--~pi~~~eeR~~~l~~~ 72 (353)
T PTZ00308 9 PGTIRVWVDGCFDMLHFGHANALRQARALG-DELFVGCHSDEEIMRNKG--PPVMHQEERYEALRAC 72 (353)
T ss_pred CCcEEEEEEeecccCCHHHHHHHHHHHHhC-CEEEEEeCCHHHHhhcCC--CCCCCHHHHHHHHHhc
Confidence 345799999999999999999999999998 78999999998774 443 5799999999999864
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.43 E-value=2.2e-13 Score=88.92 Aligned_cols=59 Identities=29% Similarity=0.387 Sum_probs=50.6
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHH
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
|++.|+||.+|.||..++++|.+++ ++++|++++|+....++ ..++.|.++|.+++++.
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~-~~~iv~v~~d~~~~~~~-~~~i~~~eeR~~~l~~~ 59 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLG-DYLIVALSTDEFNLQKQ-KKAYHSYEHRKLILETI 59 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcC-CEEEEEEechHHHhhcC-CCCCCCHHHHHHHHHcC
Confidence 4678999999999999999999998 78999999998665332 47899999999998753
Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Back Show alignment and domain information
Probab=99.38 E-value=6.4e-13 Score=99.53 Aligned_cols=62 Identities=32% Similarity=0.419 Sum_probs=55.9
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcc-cccCCCCCCCCHHHHHHHHHH
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML-TNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~-~~k~~~~~i~~~~~R~~~v~~ 83 (87)
++-.+|++.|+||.+|+||.+.|.+|.++| ++|||||++|+.+ .||+ .|+++.+||++|++.
T Consensus 6 ~~~~rVw~DGCfDm~HyGHanaLrQAkalG-dkLivGVHsDeeI~~nKG--pPV~t~eERy~~v~~ 68 (358)
T KOG2803|consen 6 NRPVRVWADGCFDMVHYGHANALRQAKALG-DKLIVGVHSDEEITLNKG--PPVFTDEERYEMVKA 68 (358)
T ss_pred CCceeEEeccchhhhhhhhhHHHHHHHHhC-CeEEEEecchHHHHhcCC--CCcccHHHHHHHHhh
Confidence 445579999999999999999999999999 8999999999877 4665 899999999999975
>cd02172 RfaE_N N-terminal domain of RfaE
Back Show alignment and domain information
Probab=99.38 E-value=1.8e-12 Score=87.06 Aligned_cols=61 Identities=31% Similarity=0.391 Sum_probs=52.5
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
-+++++-|+||.+|.||..++++|.+++ +.++|+++.++.+... ...++.|.++|.+++++
T Consensus 4 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~-~~~vv~~~~d~~~~~~-~~~~i~~~~eR~~~l~~ 64 (144)
T cd02172 4 KTVVLCHGVFDLLHPGHVRHLQAARSLG-DILVVSLTSDRYVNKG-PGRPIFPEDLRAEVLAA 64 (144)
T ss_pred CEEEEEecccCCCCHHHHHHHHHHHHhC-CeEEEEEeChHHhccC-CCCCCCCHHHHHHHHHc
Confidence 3578999999999999999999999998 6899999998765422 24789999999999875
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II
Back Show alignment and domain information
Probab=99.38 E-value=1.8e-12 Score=86.99 Aligned_cols=63 Identities=33% Similarity=0.490 Sum_probs=53.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+++++.|+||.+|.||..++++|.+.+ +.++|+++.|+... .|+...|+.+.++|.++++++
T Consensus 11 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~-~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~ 74 (144)
T TIGR02199 11 KKIVFTNGCFDILHAGHVSYLQQARALG-DRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAAL 74 (144)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHhC-CccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 5789999999999999999999999998 67999999997543 232225799999999999874
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic
Back Show alignment and domain information
Probab=99.37 E-value=2.2e-12 Score=92.21 Aligned_cols=59 Identities=8% Similarity=0.195 Sum_probs=44.9
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhc-Ce-E-----EEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELAR-DR-I-----VVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~-d~-v-----ivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.+|||||||+|.||+.+++.|.+..+ +. + ++.+..+++. | ....+.++|++|++..++
T Consensus 2 ~~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~~~~~--k---~~~~~~~~Rl~Ml~lai~ 67 (225)
T cd09286 2 VLLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVNDAYG--K---KGLASAKHRVAMCRLAVQ 67 (225)
T ss_pred EEEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeeccCCC--C---CCCCCHHHHHHHHHHHHc
Confidence 468999999999999999999998873 33 2 2234444432 2 456799999999998875
Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.37 E-value=2.2e-12 Score=98.86 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=54.0
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc----ccCCCCCCCCHHHHHHHHHHHHh
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT----NKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~----~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
..+++++++|+|||+|.||+.++++|+.++ |.|+|+|.++++.+ ++.......+.++|.+|+++.++
T Consensus 50 ~~~~~~v~~G~FdP~H~GH~~lI~~A~~~~-d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~ 120 (399)
T PRK08099 50 QMKKIGVVFGKFYPLHTGHIYLIQRACSQV-DELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFK 120 (399)
T ss_pred hcCcEEEEEEecCCCCHHHHHHHHHHHHHC-CeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhC
Confidence 446799999999999999999999999998 79999998776322 00112467899999999998765
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase
Back Show alignment and domain information
Probab=99.35 E-value=2.9e-12 Score=96.32 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=50.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
-+++++||+|||+|.||+.++++|+.++ |.++|++... + ....|+++|++|+++.+++
T Consensus 139 ~~i~~~~g~fdP~t~GH~~li~~A~~~~-d~~~v~v~~~-----~---~~~f~~~~R~~~v~~~~~~ 196 (332)
T TIGR00124 139 NKIGSIVMNANPFTNGHRYLIEQAARQC-DWLHLFVVKE-----D---ASLFSYDERFALVKQGIQD 196 (332)
T ss_pred CcEEEEEeCcCCCchHHHHHHHHHHHHC-CEEEEEEEeC-----C---CCCCCHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999 7888888532 2 4589999999999987753
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=99.33 E-value=2e-12 Score=99.72 Aligned_cols=60 Identities=32% Similarity=0.486 Sum_probs=54.5
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
+|+++|+||.+|.||..+|.+|..+| |+++||+++|...+ -|+..+|+.|.++|...+..
T Consensus 334 vvfTNGcFDIlH~GHvsyL~~Ar~lg-d~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~ 394 (467)
T COG2870 334 VVFTNGCFDILHAGHVTYLAQARALG-DRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAA 394 (467)
T ss_pred EEEecchhhhccccHHHHHHHHHhhC-CeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhh
Confidence 89999999999999999999999999 89999999999886 35567999999999987754
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.33 E-value=6.7e-12 Score=88.73 Aligned_cols=63 Identities=14% Similarity=0.193 Sum_probs=53.3
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
.|+.+++.|.|.|+|.||+.+++.|++.+ |+|||++.+....... +.| +++.+|..|+...|.
T Consensus 3 ~yd~~v~iGRFQPfH~GHl~~I~~al~~~-devII~IGSA~~s~t~--~NP-FTa~ER~~MI~~aL~ 65 (196)
T PRK13793 3 TFDYLVFIGRFQPFHLAHMQTIEIALQQS-RYVILALGSAQMERNI--KNP-FLAIEREQMILSNFS 65 (196)
T ss_pred ceeEEEEEecCCCCcHHHHHHHHHHHHhC-CEEEEEEccCCCCCCC--CCC-CCHHHHHHHHHHhcc
Confidence 47889999999999999999999999999 7999999886543222 234 788999999998874
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Back Show alignment and domain information
Probab=99.23 E-value=2.1e-11 Score=93.54 Aligned_cols=63 Identities=30% Similarity=0.489 Sum_probs=54.4
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCccc-ccCCCCCCCCHHHHHHHHHH
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~-~k~~~~~i~~~~~R~~~v~~ 83 (87)
..++|++.|+||.+|.||+.++++|.+++ ++++||+++|+.+. .|+...|++++++|.++++.
T Consensus 339 ~~~iv~~~G~fD~~H~GH~~~l~~a~~~~-~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~ 402 (473)
T PRK11316 339 GEKIVMTNGCFDILHAGHVSYLANARKLG-DRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAA 402 (473)
T ss_pred CCeEEEEecccccCCHHHHHHHHHHHHhC-CeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHh
Confidence 35899999999999999999999999998 78999999998663 34334689999999999864
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Back Show alignment and domain information
Probab=99.16 E-value=7.8e-11 Score=88.46 Aligned_cols=67 Identities=28% Similarity=0.438 Sum_probs=57.7
Q ss_pred CCCCcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccC-CCCCCCCHHHHHHHHHH
Q 034677 16 SPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQ-FAELIQPVDERMRNVEA 83 (87)
Q Consensus 16 ~~~~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~-~~~~i~~~~~R~~~v~~ 83 (87)
.|...-++|++.|.||.+|.||+..|+.|..++ |.+|||+.+|+....++ ...|+++..||...|.+
T Consensus 193 ~p~p~~kvVYvdGaFDLFH~GHl~~Le~ak~lg-dyLIvGI~~D~~vneykgs~~PiMnl~ER~Lsvla 260 (358)
T KOG2803|consen 193 EPKPTDKVVYVDGAFDLFHAGHLDFLEKAKRLG-DYLIVGIHTDQTVNEYKGSNYPIMNLHERVLSVLA 260 (358)
T ss_pred CCCCCCcEEEEcCchhhhccchHHHHHHHHhcc-CceEEEeecCcchhhhccCCCccchHHHHHHHHhh
Confidence 445567899999999999999999999999999 79999999998775443 35799999999988765
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme
Back Show alignment and domain information
Probab=99.06 E-value=4.5e-10 Score=77.42 Aligned_cols=61 Identities=23% Similarity=0.331 Sum_probs=44.0
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhc--CeEEEEEcCCCcc----cccCCCCCCCCHHHHHHHHHHH
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELAR--DRIVVGVCDGPML----TNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~--d~vivgv~~d~~~----~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
+++-|+||++|.||..++++|.++++ +...+.++-++.- ..+....++.|.++|+++++..
T Consensus 2 vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l 68 (180)
T cd02064 2 VVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESL 68 (180)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHc
Confidence 67889999999999999999999973 2344444444321 1122246799999999999863
FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
>cd02169 Citrate_lyase_ligase Citrate lyase ligase
Back Show alignment and domain information
Probab=99.06 E-value=6.3e-10 Score=82.66 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=47.0
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
-.+++.+-|||||+|.||+.++++|++.+ +.+.|.+-.. + .+..|+++|++|++..+++
T Consensus 113 ~~~~~~~~~~FDPiH~GHl~ii~~a~~~~-d~~~V~i~~~-----~---~~~~~~e~R~~ml~~ai~~ 171 (297)
T cd02169 113 GKKIAAIVMNANPFTLGHRYLVEKAAAEN-DWVHLFVVSE-----D---KSLFSFADRFKLVKKGTKH 171 (297)
T ss_pred CCceEEEEecCCCCchHHHHHHHHHHhhC-CeEEEEEEcC-----C---CCCCCHHHHHHHHHHHhCC
Confidence 35788888999999999999999999998 4555544322 1 3578999999999998763
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.02 E-value=9.4e-10 Score=76.51 Aligned_cols=63 Identities=17% Similarity=0.253 Sum_probs=52.7
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++++++-|.|.|+|-||+.+++.|++.. |+|+|++.++...-.. ..| .+..+|..|+++.|.
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~v-DeliI~iGSa~~~~t~--~nP-fTagER~~mi~~~L~ 64 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKV-DELIIVIGSAQESHTL--KNP-FTAGERIPMIRDRLR 64 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhC-CEEEEEEccCcccccc--cCC-CCccchhHHHHHHHH
Confidence 57889999999999999999999999998 8999999998643111 133 677999999998886
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain
Back Show alignment and domain information
Probab=98.98 E-value=1.8e-09 Score=75.27 Aligned_cols=51 Identities=22% Similarity=0.223 Sum_probs=40.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
-+|||+|+||+.++++|++++ +.++|++... + .+..|.++|++|++..+++
T Consensus 6 ~~~DPiH~GHl~i~~~a~~~~-d~~~V~v~p~-----~---~~~~s~e~R~~Mi~~a~~~ 56 (182)
T smart00764 6 MNANPFTLGHRYLVEQAAAEC-DWVHLFVVSE-----D---ASLFSFDERFALVKKGTKD 56 (182)
T ss_pred ECCCCCCHHHHHHHHHHHHHC-CceEEEEEeC-----C---CCCCCHHHHHHHHHHHhcc
Confidence 489999999999999999999 4555444322 1 2467999999999998763
Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
>PRK13671 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=98.95 E-value=2.2e-09 Score=79.98 Aligned_cols=53 Identities=11% Similarity=0.190 Sum_probs=44.3
Q ss_pred ccCCCCCHHHHHHHHHHHHHh-cCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 28 GTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~-~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
-+|||+|+||+.+++++++.. .|.++++++++++.+ + ...+.+..+|.+|++.
T Consensus 7 aeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~qr--g-~pa~~~~~~R~~ma~~ 60 (298)
T PRK13671 7 AEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQR--G-EIAVASFEKRKKIALK 60 (298)
T ss_pred eeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCCC--C-CCCCCCHHHHHHHHHH
Confidence 489999999999999999986 389999998887643 2 2456699999999876
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism]
Back Show alignment and domain information
Probab=98.74 E-value=1.8e-08 Score=75.59 Aligned_cols=63 Identities=24% Similarity=0.370 Sum_probs=54.1
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHh-cCeEEEEEcCCCcc-cccCCCCCCCCHHHHHHHHHH
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPML-TNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~-~d~vivgv~~d~~~-~~k~~~~~i~~~~~R~~~v~~ 83 (87)
.+--+|+..|.||.+|.||..-|.+|..++ +-+||||+++|..- +.| ...+++.++|++.|+.
T Consensus 61 ~RPVRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~K--G~TVm~e~ERyE~lrH 125 (348)
T KOG2804|consen 61 DRPVRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFK--GRTVMNENERYEALRH 125 (348)
T ss_pred CCceEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhcc--CceecChHHHHHHhhh
Confidence 444578999999999999999999999998 58999999999753 344 4789999999998864
>PRK07143 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=98.47 E-value=6.5e-07 Score=66.20 Aligned_cols=64 Identities=20% Similarity=0.311 Sum_probs=46.3
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
.....+++=|+||-+|.||..|+++|.+.+ +..+|...+++..-.+.....+.|.++|.+.++.
T Consensus 13 ~~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~-~~~vV~tF~~P~~~~~~~~~~l~~~~er~~~l~~ 76 (279)
T PRK07143 13 KFEKPTFVLGGFESFHLGHLELFKKAKESN-DEIVIVIFKNPENLPKNTNKKFSDLNSRLQTLAN 76 (279)
T ss_pred CCCCeEEEEccCCcCCHHHHHHHHHHHHCC-CcEEEEEeCChHHhcccCcccCCCHHHHHHHHHH
Confidence 344567888999999999999999999876 5555555544321111123568999999999875
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Back Show alignment and domain information
Probab=98.44 E-value=6.4e-07 Score=66.84 Aligned_cols=62 Identities=23% Similarity=0.349 Sum_probs=44.8
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhc--CeEEEEEcCCCcc----cccCCCCCCCCHHHHHHHHHHH
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELAR--DRIVVGVCDGPML----TNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~--d~vivgv~~d~~~----~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+++-|+||-+|.||..++++|.+.++ ..-.+.++-++.- ..+....++.+.++|...++..
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~ 82 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAEL 82 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHc
Confidence 789999999999999999999999973 1122344444321 1122246799999999998763
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2
Back Show alignment and domain information
Probab=98.19 E-value=6.4e-06 Score=56.12 Aligned_cols=64 Identities=27% Similarity=0.428 Sum_probs=39.1
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhc--CeEEEEEcCC--C--cccccCCCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR--DRIVVGVCDG--P--MLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~--d~vivgv~~d--~--~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.+.+++=|+||-+|.||..|+++|.+.+. +...+.++-+ | .+........+.|.++|.+.++.+
T Consensus 5 ~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~ 74 (157)
T PF06574_consen 5 KKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESL 74 (157)
T ss_dssp S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHT
T ss_pred CCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHc
Confidence 45678889999999999999999999972 3333333333 2 111112235699999999999864
7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
>TIGR00339 sopT ATP sulphurylase
Back Show alignment and domain information
Probab=98.01 E-value=3.7e-05 Score=59.14 Aligned_cols=59 Identities=25% Similarity=0.210 Sum_probs=48.4
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHh-cCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~-~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.|+--=||||+|.||..+++.|++.. .|.|++.+...+. | ....|.+.|+++++.+++
T Consensus 184 ~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g~~---k---~~~~~~~~R~~~~~~~~~ 243 (383)
T TIGR00339 184 DTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVGLT---K---PGDIPAEVRMRAYEVLKE 243 (383)
T ss_pred CeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCCC---C---CCCCCHHHHHHHHHHHHh
Confidence 566666899999999999999999983 2789888877732 3 367999999999998875
Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6
Back Show alignment and domain information
Probab=97.95 E-value=2.7e-05 Score=54.70 Aligned_cols=49 Identities=20% Similarity=0.234 Sum_probs=39.1
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
-.=||++.||..|+++|++.+ |.|.|=+.+.+ .-.+|+++|++||++=+
T Consensus 6 MNaNPFT~GH~yLiE~Aa~~~-d~l~vFVV~eD--------~S~Fpf~~R~~LVk~G~ 54 (182)
T PF08218_consen 6 MNANPFTLGHRYLIEQAAKEC-DWLHVFVVSED--------RSLFPFADRYELVKEGT 54 (182)
T ss_pred EcCCCCccHHHHHHHHHHHhC-CEEEEEEEccc--------cCcCCHHHHHHHHHHHh
Confidence 356999999999999999999 66666554432 34799999999998744
2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase
Back Show alignment and domain information
Probab=97.91 E-value=3.4e-05 Score=57.26 Aligned_cols=59 Identities=24% Similarity=0.361 Sum_probs=39.5
Q ss_pred EEcccCCCCCHHHHHHHHHHHHHhc----CeEEEEEcCCC--cccccCCCCCCCCHHHHHHHHHHH
Q 034677 25 VLGGTFDRLHDGHRLFLKASAELAR----DRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 25 ~~gGtFDplH~GHl~ll~~a~~~~~----d~vivgv~~d~--~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
++-|+||.+|.||..|++++.+.+. ..+++.....| .+... ....+.+.++|.++++.+
T Consensus 2 vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~-~~~~l~~~~~k~~~l~~~ 66 (288)
T TIGR00083 2 LAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWL-TAPALTPLEDKARQLQIK 66 (288)
T ss_pred EEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCcc-CCCCCCCHHHHHHHHHHc
Confidence 5669999999999999999998752 23333333322 11111 112389999999998753
multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function
Back Show alignment and domain information
Probab=97.67 E-value=0.0001 Score=56.82 Aligned_cols=53 Identities=13% Similarity=0.270 Sum_probs=31.2
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHH
Q 034677 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~ 82 (87)
--|||+|+||+..++++++..+..++|+|-|..+.. +..+.+.+--.|.+|-.
T Consensus 8 aEYNPFHnGH~y~i~~~k~~~~ad~ii~vMSGnFvQ--RGEPAi~dKw~RA~~AL 60 (388)
T PF05636_consen 8 AEYNPFHNGHLYQIEQAKKITGADVIIAVMSGNFVQ--RGEPAIIDKWTRAEMAL 60 (388)
T ss_dssp ---TT--HHHHHHHHHHH---TSSEEEEEE--TTSB--TSSB-SS-HHHHHHHHH
T ss_pred EeECCccHHHHHHHHHHhccCCCCEEEEEECCCccc--CCCeeeCCHHHHHHHHH
Confidence 369999999999999999887645566666666653 33466889899988753
>PRK13670 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=97.60 E-value=0.00015 Score=55.91 Aligned_cols=54 Identities=17% Similarity=0.270 Sum_probs=38.8
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
--|||+|.||..+++++.+.....++++|-+..++.. .. ..+.+..+|.+++..
T Consensus 8 aEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qr-g~-p~i~~~~~R~~~a~~ 61 (388)
T PRK13670 8 VEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQR-GE-PAIVDKWTRAKMALE 61 (388)
T ss_pred eeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCC-CC-CCCCCHHHHHHHHHH
Confidence 4699999999999999999874233333335444432 22 449999999999875
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=97.44 E-value=0.00031 Score=52.78 Aligned_cols=64 Identities=30% Similarity=0.421 Sum_probs=42.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeE-EEEEcCCC-ccc-ccC--CCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRI-VVGVCDGP-MLT-NKQ--FAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~v-ivgv~~d~-~~~-~k~--~~~~i~~~~~R~~~v~~~ 84 (87)
...+++=|.||-+|.||..++++|.+.+. +.+ .+.++-++ +.+ .+. ....+.|.++|.+.++.+
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~ 84 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGY 84 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhc
Confidence 45677789999999999999999997762 122 22333332 211 111 123489999999988764
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Probab=97.36 E-value=0.0003 Score=53.92 Aligned_cols=53 Identities=17% Similarity=0.262 Sum_probs=40.2
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 28 GTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 28 GtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
--|||+|+||..++++|.+++. |.+++++.+| +.. +....+.+..+|.+|...
T Consensus 8 ~eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgd-f~q--Rgepai~~k~~r~~~aL~ 61 (358)
T COG1323 8 AEYNPFHNGHQYHINKAREEFKGDEIIAVMSGD-FTQ--RGEPAIGHKWERKKMALE 61 (358)
T ss_pred eecCcccccHHHHHHHHHHhccCCceEEeeecc-hhh--cCCCccccHHHHHhhhhh
Confidence 4699999999999999999764 5666666555 432 234678999999998754
>TIGR00018 panC pantoate--beta-alanine ligase
Back Show alignment and domain information
Probab=96.94 E-value=0.0038 Score=46.49 Aligned_cols=59 Identities=27% Similarity=0.397 Sum_probs=41.6
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCc--ccccCCCCCCCCHHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
.-|.+-|. +|.||..|+++|.+.. +.++|.+..+|. .+......-..+.++|.++++++
T Consensus 25 g~VpTmG~---LH~GH~~LI~~a~~~a-~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~ 85 (282)
T TIGR00018 25 GFVPTMGN---LHDGHMSLIDRAVAEN-DVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL 85 (282)
T ss_pred EEEECCCc---ccHHHHHHHHHHHHhC-CeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc
Confidence 33445566 9999999999999998 678887766642 22221223467889999988753
This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Back Show alignment and domain information
Probab=96.92 E-value=0.0033 Score=47.68 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=42.8
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEE-EEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVV-GVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~viv-gv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
+-+++..-..=||+..||..|+++|+..+ |-|-+ .|..| .-.+|+++|++||++=+
T Consensus 144 gkkIgaIVMNANPFTLGH~YLVEqAaaqc-DwlHLFvV~eD---------~S~f~y~~R~~Lv~~G~ 200 (352)
T COG3053 144 GKKIGAIVMNANPFTLGHRYLVEQAAAQC-DWLHLFVVKED---------SSLFPYEDRLDLVKKGT 200 (352)
T ss_pred CCeeEEEEEeCCCccchhHHHHHHHHhhC-CEEEEEEEecc---------cccCCHHHHHHHHHHhh
Confidence 34566666788999999999999999999 55543 34444 23699999999998643
>cd00560 PanC Pantoate-beta-alanine ligase
Back Show alignment and domain information
Probab=96.91 E-value=0.0042 Score=46.08 Aligned_cols=61 Identities=21% Similarity=0.393 Sum_probs=42.8
Q ss_pred CcccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcc--cccCCCCCCCCHHHHHHHHHH
Q 034677 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML--TNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 19 ~~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~--~~k~~~~~i~~~~~R~~~v~~ 83 (87)
+....|.+-|. +|.||..|+++|.+.+ +.++|.+..+|.- +......-..+.+++.+.++.
T Consensus 22 ~~ig~V~TmG~---LH~GH~~LI~~a~~~a-~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~ 84 (277)
T cd00560 22 KTIGFVPTMGA---LHEGHLSLVRRARAEN-DVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEE 84 (277)
T ss_pred CeEEEEECCCc---ccHHHHHHHHHHHHhC-CEEEEEecCChhhcCCcccccccCCCHHHHHHHHHH
Confidence 33444556666 9999999999999998 7888888666522 212122336778999988875
PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Back Show alignment and domain information
Probab=96.71 E-value=0.0075 Score=44.77 Aligned_cols=55 Identities=24% Similarity=0.399 Sum_probs=38.8
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCc--ccccCCCCCCCCHHHHHHHHHHH
Q 034677 29 TFDRLHDGHRLFLKASAELARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 29 tFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
|..-+|.||..|+++|.+.. +.+++.+..+|. .+.......+.+.++|.++++.+
T Consensus 29 tmG~lH~GH~~Li~~a~~~a-~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~ 85 (281)
T PRK00380 29 TMGALHEGHLSLVREARAEA-DIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAA 85 (281)
T ss_pred ccCceeHHHHHHHHHHHHhC-CEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHc
Confidence 44449999999999999998 677777765542 22121223467889999988764
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism]
Back Show alignment and domain information
Probab=96.65 E-value=0.0081 Score=43.51 Aligned_cols=59 Identities=22% Similarity=0.291 Sum_probs=41.0
Q ss_pred EEcccCCCCCHHHHHHHHHHHHHh----cCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 25 VLGGTFDRLHDGHRLFLKASAELA----RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 25 ~~gGtFDplH~GHl~ll~~a~~~~----~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
+..|+|||+.++|+.+.+-|.... .-+|+=|+-+.-.=.+|+ +.+.|..+|++|++...
T Consensus 12 ~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimSPV~DaYkK--KgLipa~hrv~~~ElAt 74 (234)
T KOG3199|consen 12 LACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMSPVGDAYKK--KGLIPAYHRVRMVELAT 74 (234)
T ss_pred EEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEecccchhhhc--cccchhhhHHHHHHhhh
Confidence 556799999999999999999875 134444433321001232 46899999999999764
>PLN02660 pantoate--beta-alanine ligase
Back Show alignment and domain information
Probab=96.64 E-value=0.009 Score=44.59 Aligned_cols=60 Identities=25% Similarity=0.362 Sum_probs=40.9
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcc--cccCCCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML--TNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~--~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
..-|.+=|. +|.||..|+++|.+.+ +.++|.+..+|.- ++........+.++|.++++.+
T Consensus 23 igfVpTmG~---LH~GH~~LI~~a~~~a-~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~ 84 (284)
T PLN02660 23 IALVPTMGY---LHEGHLSLVRAARARA-DVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAAL 84 (284)
T ss_pred EEEEEcCch---hhHHHHHHHHHHHHhC-CEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHc
Confidence 333444455 9999999999999998 6777777655422 2121223467889999988763
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2
Back Show alignment and domain information
Probab=95.91 E-value=0.059 Score=38.69 Aligned_cols=59 Identities=31% Similarity=0.336 Sum_probs=41.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.|+--=|-||+|.||..+.+.|++...+.|+|-+.-... | ..-.|.+.|++..+.+++
T Consensus 21 ~~VvafqtrnPlHraHe~l~~~a~e~~~~~lll~plvG~~---k---~~d~~~~~r~~~~~~~~~ 79 (215)
T PF01747_consen 21 RRVVAFQTRNPLHRAHEYLMRRALEKAGDGLLLHPLVGPT---K---PGDIPYEVRVRCYEALID 79 (215)
T ss_dssp SSEEEEEESS---HHHHHHHHHHHHHHTSEEEEEEBESB----S---TTSCCHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHhcCcEEEEeccCCC---C---cCCCCHHHHHHHHHHHHH
Confidence 3444445699999999999999999975677776644421 2 457899999999988875
7.7.4 from EC) some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase, IPR002891 from INTERPRO. Both enzymes are required for PAPS (phosphoadenosine-phosphosulphate) synthesis from inorganic sulphate []. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulphate APS from ATP and inorganic sulphate [].; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0000103 sulfate assimilation; PDB: 3CR8_B 1M8P_C 1I2D_B 1JHD_A 1V47_B 1X6V_B 1XNJ_A 1XJQ_B 2QJF_A 2GKS_B ....
>cd00517 ATPS ATP-sulfurylase
Back Show alignment and domain information
Probab=95.59 E-value=0.093 Score=40.20 Aligned_cols=59 Identities=29% Similarity=0.252 Sum_probs=46.0
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.|+--=|-||+|.||..+.+.|++..+ +-|+|-+.-... | ..-.|.+.|++..+.+++
T Consensus 157 ~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~plvG~~---k---~~d~~~~~r~~~~~~l~~ 216 (353)
T cd00517 157 RRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPLVGWT---K---PGDVPDEVRMRAYEALLE 216 (353)
T ss_pred CeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEeccCCC---C---CCCCCHHHHHHHHHHHHH
Confidence 4565568999999999999999999875 567766654431 2 457899999999988875
ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Back Show alignment and domain information
Probab=95.59 E-value=0.079 Score=41.22 Aligned_cols=60 Identities=27% Similarity=0.253 Sum_probs=45.7
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+-++++---|+||+|.||..+-+.|++.. |-|+|-+.-.. ++ ..-.+.+.|++..+.+++
T Consensus 182 gwk~vvafQTRNp~HraHEyl~K~Al~~v-dgllv~plVG~----tk--~gD~~~e~rm~~ye~l~~ 241 (397)
T COG2046 182 GWKTVVAFQTRNPPHRAHEYLQKRALEKV-DGLLVHPLVGA----TK--PGDIPDEVRMEYYEALLK 241 (397)
T ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhc-CcEEEEeeecc----cc--CCCchHHHHHHHHHHHHH
Confidence 46788888999999999999999999998 44555443322 22 346788999998888775
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Back Show alignment and domain information
Probab=95.48 E-value=0.1 Score=40.54 Aligned_cols=59 Identities=27% Similarity=0.318 Sum_probs=45.4
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
-+.|+--=|-||+|.||..|.+.|++.+ |-+++-+.-... | ..-.|.+.|++..+.+++
T Consensus 186 w~~VvafqTrnP~HraHe~l~~~a~e~~-d~lll~plvG~~---k---~~di~~~~r~~~~~~~~~ 244 (391)
T PRK04149 186 WKTVVAFQTRNPPHRAHEYLQKCALEIV-DGLLLNPLVGET---K---SGDIPAEVRMEAYEALLK 244 (391)
T ss_pred CCeEEEeecCCCCchHHHHHHHHHHHhc-CeEEEecCcCCC---C---CCCCCHHHHHHHHHHHHH
Confidence 4566666789999999999999999988 566664444321 2 457899999999988875
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated
Back Show alignment and domain information
Probab=94.05 E-value=0.33 Score=39.19 Aligned_cols=60 Identities=23% Similarity=0.162 Sum_probs=44.9
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
-+.|+--=|-||+|.||..+.+.|++..+..|++-+.-.. .| ..-.|++.|++..+.+++
T Consensus 186 w~~v~afqtrnP~Hr~He~l~~~a~~~~d~~lll~p~~G~---~k---~~d~~~~~r~~~~~~~~~ 245 (568)
T PRK05537 186 WRRVVAFQTRNPLHRAHEELTKRAAREVGANLLIHPVVGM---TK---PGDIDHFTRVRCYEALLD 245 (568)
T ss_pred CCcEEEEecCCCCcHHHHHHHHHHHHhcCCeEEEecCCCC---CC---CCCCCHHHHHHHHHHHHH
Confidence 3566666789999999999999999987435555443322 12 457899999999998875
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Back Show alignment and domain information
Probab=93.97 E-value=0.065 Score=42.91 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=30.0
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
.+-|--|==-+|.||+.|+++|.+.+ |.++|.+--||
T Consensus 21 ~ig~VPTMG~LH~GHlsLi~~A~~~~-d~vVvSIFVNP 57 (512)
T PRK13477 21 TIGFVPTMGALHQGHLSLIRRARQEN-DVVLVSIFVNP 57 (512)
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhC-CEEEEEEccCc
Confidence 34444677789999999999999997 89999986654
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=93.67 E-value=0.12 Score=38.65 Aligned_cols=36 Identities=31% Similarity=0.462 Sum_probs=29.9
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
+-|-=|--.+|.||+.|+++|.+.. |.++|.+--++
T Consensus 24 Vg~VPTMG~LH~GHlsLVr~A~~~~-d~VVVSIFVNP 59 (285)
T COG0414 24 VGLVPTMGNLHEGHLSLVRRAKKEN-DVVVVSIFVNP 59 (285)
T ss_pred EEEEcCCcccchHHHHHHHHHhhcC-CeEEEEEEeCh
Confidence 4444577789999999999999887 89999987765
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []
Back Show alignment and domain information
Probab=93.47 E-value=0.12 Score=38.50 Aligned_cols=36 Identities=25% Similarity=0.429 Sum_probs=24.5
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
+-|--|=--+|.||+.|+++|...+ |.++|.+--+|
T Consensus 24 igfVPTMGaLHeGHlsLi~~A~~~~-d~vVVSIFVNP 59 (280)
T PF02569_consen 24 IGFVPTMGALHEGHLSLIRRARAEN-DVVVVSIFVNP 59 (280)
T ss_dssp EEEEEE-SS--HHHHHHHHHHHHHS-SEEEEEE---G
T ss_pred EEEECCCchhhHHHHHHHHHHHhCC-CEEEEEECcCc
Confidence 3334566678999999999999988 89999987665
Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
>PLN02341 pfkB-type carbohydrate kinase family protein
Back Show alignment and domain information
Probab=87.05 E-value=0.15 Score=39.94 Aligned_cols=29 Identities=10% Similarity=-0.038 Sum_probs=26.0
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELA 48 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~ 48 (87)
.-+.++..|.||.+|.||+.+|.++...+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (470)
T PLN02341 413 NEDDTFWAELLKNSDCSEISFLSKMAING 441 (470)
T ss_pred CcchhHHHHhhcccccchhhhhhhhhhcc
Confidence 45788999999999999999999998765
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=82.37 E-value=0.62 Score=36.69 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=25.2
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCC
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG 59 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d 59 (87)
.++++||||++ +-|| ++|+-|+. + ..+|.|+..-
T Consensus 319 diAFVGGSlv~-~GGH-N~LEpa~~-~-~pvi~Gp~~~ 352 (419)
T COG1519 319 DIAFVGGSLVP-IGGH-NPLEPAAF-G-TPVIFGPYTF 352 (419)
T ss_pred cEEEECCcccC-CCCC-ChhhHHHc-C-CCEEeCCccc
Confidence 68999999999 6888 56665553 3 4788887654
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Back Show alignment and domain information
Probab=81.21 E-value=2.9 Score=30.87 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=29.8
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
-+++++ -|--.+|.||..|++++.... ++.+|.+.-+|
T Consensus 24 ~tIgfV-PTMG~LHeGH~SLvrqs~~~~-~~tVVSIfVNP 61 (283)
T KOG3042|consen 24 ETIGFV-PTMGCLHEGHASLVRQSVKEN-TYTVVSIFVNP 61 (283)
T ss_pred CeEEEe-cccccccccHHHHHHHHHhhC-ceEEEEEEech
Confidence 344443 477789999999999999998 78888876664
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value
Query
87
d1lw7a1 163
c.26.1.3 (A:57-219) Transcriptional regulator NadR
5e-07
d1k4ma_
213
c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad
5e-05
d1kama_
189
c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad
1e-04
d1ej2a_
167
c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad
4e-04
d1f9aa_
164
c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) ad
0.002
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Length = 163
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Transcriptional regulator NadR, NMN-adenylyltransferase domain
species: Haemophilus influenzae [TaxId: 727]
Score = 42.5 bits (99), Expect = 5e-07
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFA----ELIQPVDERMR 79
V+ G F +H GH + + D + V VC + K F + + V +R+R
Sbjct: 5 GVIFGKFYPVHTGHINMIYEAFSKV-DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLR 63
Query: 80 NVEAYIK 86
++ K
Sbjct: 64 WMQQIFK 70
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Length = 213
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Escherichia coli [TaxId: 562]
Score = 37.4 bits (85), Expect = 5e-05
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 25 VLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPMLTNKQF 67
+ GGTFD +H GH + + + R+ + + P +
Sbjct: 7 LFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPE 50
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 189
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Score = 36.3 bits (82), Expect = 1e-04
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 25 VLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPMLTNKQF 67
+ GGTFD H+GH + + + D I P +
Sbjct: 6 IFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNED 49
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 167
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Score = 34.8 bits (79), Expect = 4e-04
Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 25 VLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
+L G H GH +K+ E D +++ + + + + + +
Sbjct: 4 LLVGRMQPFHRGHLQVIKSILEEV-DELIICIGSAQLSHSIRDPFTAGERVMMLTKALS 61
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 164
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 32.9 bits (74), Expect = 0.002
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 25 VLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84
+ G F H GH +K AE D I++G+ + ER+ +
Sbjct: 4 FIIGRFQPFHKGHLEVIKKIAEEV-DEIIIGIGSAQKSHTLEN---PFTAGERILMITQS 59
Query: 85 IK 86
+K
Sbjct: 60 LK 61
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 87
d1coza_ 126
CTP:glycerol-3-phosphate cytidylyltransferase {Bac
99.75
d1ej2a_
167
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.69
d1f9aa_
164
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.69
d1o6ba_
163
Phosphopantetheine adenylyltransferase {Bacillus s
99.68
d1lw7a1 163
Transcriptional regulator NadR, NMN-adenylyltransf
99.65
d1qjca_ 157
Phosphopantetheine adenylyltransferase {Escherichi
99.63
d1od6a_ 160
Phosphopantetheine adenylyltransferase {Thermus th
99.61
d1tfua_ 157
Phosphopantetheine adenylyltransferase {Mycobacter
99.58
d1vlha_ 157
Phosphopantetheine adenylyltransferase {Thermotoga
99.57
d1k4ma_
213
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.53
d1kama_
189
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.52
d1kr2a_
271
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.52
d1nuua_
233
Cytosolic NMN/NAMN adenylyltransferase {Human (Hom
99.35
d1jhda2
223
ATP sulfurylase catalytic domain {Sulfur-oxidizing
99.23
d1mrza2 157
FMN adenylyltransferase domain of bifunctional FAD
98.39
d1g8fa2
221
ATP sulfurylase catalytic domain {Baker's yeast (S
96.65
d1v47a2
214
ATP sulfurylase catalytic domain {Thermus thermoph
96.25
d1v8fa_
276
Pantothenate synthetase (Pantoate-beta-alanine lig
95.32
d1ihoa_
282
Pantothenate synthetase (Pantoate-beta-alanine lig
95.25
d1x6va2
235
ATP sulfurylase catalytic domain {Human (Homo sapi
94.04
d2a84a1
286
Pantothenate synthetase (Pantoate-beta-alanine lig
93.04
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]}
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Cytidylyltransferase
domain: CTP:glycerol-3-phosphate cytidylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.75 E-value=1.7e-19 Score=115.59 Aligned_cols=61 Identities=30% Similarity=0.389 Sum_probs=54.3
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
|++|+++|+||++|.||+.++++|+++| |.|+||+++|+....++ .+|++|+++|.++|++
T Consensus 1 Mk~V~~~G~FD~lH~GH~~~l~~Ak~~g-d~liV~v~sD~~~~~~k-~~pi~~~~eR~~~l~~ 61 (126)
T d1coza_ 1 MKKVITYGTFDLLHWGHIKLLERAKQLG-DYLVVAISTDEFNLQKQ-KKAYHSYEHRKLILET 61 (126)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS-SEEEEEEECHHHHHHHT-CCCSSCHHHHHHHHTT
T ss_pred CcEEEEeeEeCCCCHHHHHHHHHHHhhC-ceeeeeeeccchhhhcc-CcccCCHHHHHHHhhh
Confidence 7899999999999999999999999998 89999999998764332 3799999999999864
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=99.69 E-value=1.5e-17 Score=107.90 Aligned_cols=61 Identities=16% Similarity=0.222 Sum_probs=51.9
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|| ++|||||||+|.||+.++++|++.+ |+++|+|++....+.+ ....+.++|++|++..++
T Consensus 1 mk-gi~~G~FdP~H~GH~~ii~~a~~~~-d~v~v~i~~~~~~~~~---~~~~~~~~R~~mi~~~~~ 61 (167)
T d1ej2a_ 1 MR-GLLVGRMQPFHRGHLQVIKSILEEV-DELIICIGSAQLSHSI---RDPFTAGERVMMLTKALS 61 (167)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTC-SEEEEEECSTTCCSSS---SSCSCHHHHHHHHHHHHH
T ss_pred CE-EEEeeccCCCCHHHHHHHHHHHHHC-CceEEEEecCCCCCCc---cccccHHHHHHHHHHHHH
Confidence 44 9999999999999999999999998 7999999876544333 456899999999998875
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.69 E-value=2.7e-17 Score=106.08 Aligned_cols=61 Identities=25% Similarity=0.320 Sum_probs=51.9
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
|+ +++||+|||+|.||+.++++|++.+ |+++|++++....+.+ ....+.++|++|++..+.
T Consensus 1 mk-gl~~G~FdP~H~GH~~li~~a~~~~-d~v~v~i~~~~~~~~~---~~~~s~~~R~~~i~~~~~ 61 (164)
T d1f9aa_ 1 LR-GFIIGRFQPFHKGHLEVIKKIAEEV-DEIIIGIGSAQKSHTL---ENPFTAGERILMITQSLK 61 (164)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTC-SEEEEEECSTTCCSSS---SCCSCHHHHHHHHHHHHT
T ss_pred CE-EEEecccCCCCHHHHHHHHHHHHhC-CCeEEEecCCccccCc---CCCCCHHHHHHHHHHHhh
Confidence 45 9999999999999999999999999 7999999876543332 456899999999998875
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=7.6e-17 Score=103.63 Aligned_cols=58 Identities=26% Similarity=0.361 Sum_probs=50.4
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+|++|||||||+|.||+.++++|++.+ |+|+|.++.++. + ++..+.++|.+|+.....
T Consensus 2 ~IaifgGsFdPiH~GHl~i~~~a~~~~-D~v~v~~~~~~~---~---~~~~~~~~r~~~~~~~~~ 59 (163)
T d1o6ba_ 2 SIAVCPGSFDPVTYGHLDIIKRGAHIF-EQVYVCVLNNSS---K---KPLFSVEERCELLREVTK 59 (163)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCCS---S---CCSSCHHHHHHHHHHHHT
T ss_pred eEEEeccccCCCCHHHHHHHHHHHHhC-CEEEEccccccc---c---cccCCHHHHHHHHhhhcc
Confidence 589999999999999999999999998 899998877643 2 568899999999987653
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Transcriptional regulator NadR, NMN-adenylyltransferase domain
species: Haemophilus influenzae [TaxId: 727]
Probab=99.65 E-value=5.9e-17 Score=102.90 Aligned_cols=64 Identities=23% Similarity=0.309 Sum_probs=53.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccC----CCCCCCCHHHHHHHHHHHHh
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQ----FAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~----~~~~i~~~~~R~~~v~~~l~ 86 (87)
+++++||+|||+|.||+.++++|++.+ |+++|++++++..+.+. ...++.++++|.++++....
T Consensus 3 kigl~~G~FdP~H~GH~~l~~~a~~~~-d~v~v~i~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~ 70 (163)
T d1lw7a1 3 KVGVIFGKFYPVHTGHINMIYEAFSKV-DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFK 70 (163)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHHTTC-SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTS
T ss_pred eEEEEeeeCCCCCHHHHHHHHHHHHhC-CccEEEEECCCCccccccccccccCCCCHHHHHHHHHHhCc
Confidence 689999999999999999999999998 89999999887543221 24678999999999987653
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=4e-16 Score=98.84 Aligned_cols=57 Identities=18% Similarity=0.393 Sum_probs=47.7
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
|+++|||||||+|.||+.++++|++.+ |+|+|+++..+.. ++..+..+|..++...+
T Consensus 1 k~AifgGsFdP~H~GHl~li~~a~~~~-D~v~v~~~~~~~~------k~~~~~~~~~~~~~~~~ 57 (157)
T d1qjca_ 1 KRAIYPGTFDPITNGHIDIVTRATQMF-DHVILAIAASPSK------KPMFTLEERVALAQQAT 57 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEESCCSS------CCSSCHHHHHHHHHHHT
T ss_pred CEEEEeeccCCCCHHHHHHHHHHHHhC-CEeeecccCcccc------ccccCHHHHHHHHHHHH
Confidence 589999999999999999999999998 8999999887642 23567788888877654
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Thermus thermophilus [TaxId: 274]
Probab=99.61 E-value=9.4e-16 Score=97.56 Aligned_cols=55 Identities=25% Similarity=0.501 Sum_probs=41.0
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHH
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~ 83 (87)
++|||||||+|.||+.++++|++.+ |+|+|++++++..+. ....+..+|..+...
T Consensus 3 ~ifgGsFdP~H~GHl~ii~~a~~~~-D~v~i~~~~~~~kk~----~~~~~~~~~~~~~~~ 57 (160)
T d1od6a_ 3 VVYPGSFDPLTNGHLDVIQRASRLF-EKVTVAVLENPSKRG----QYLFSAEERLAIIRE 57 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECC---------CCSSCHHHHHHHHHH
T ss_pred EEeeeccCCcCHHHHHHHHHHHHhC-CEEEEeccCCCCccc----cccCCHHHHHHHHHh
Confidence 5999999999999999999999998 899999998865221 334555565555443
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=3.4e-15 Score=94.85 Aligned_cols=40 Identities=28% Similarity=0.395 Sum_probs=36.4
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCc
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM 61 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~ 61 (87)
|++++|||||||+|.||+.++++|++.+ |.++|.+...+.
T Consensus 1 m~~Av~~GsFdPiH~GHl~i~~~a~~~~-d~~~v~~~~~~~ 40 (157)
T d1tfua_ 1 MTGAVCPGSFDPVTLGHVDIFERAAAQF-DEVVVAILVNPA 40 (157)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECCSS
T ss_pred CCEeEeCcCCCCCCHHHHHHHHHHHHhc-ChHHhhccccCc
Confidence 7899999999999999999999999999 788888877654
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=2.9e-15 Score=95.14 Aligned_cols=56 Identities=27% Similarity=0.400 Sum_probs=43.7
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
|+ ++|||||||+|.||+.++++|++.+ |+|++++...+..+ .....+.+..+.+..
T Consensus 1 Mk-aifgGsFdPiH~GHl~i~~~a~~~~-D~v~v~~~~~~~~~------~~~~~~~~~~~~~~~ 56 (157)
T d1vlha_ 1 MK-AVYPGSFDPITLGHVDIIKRALSIF-DELVVLVTENPRKK------CMFTLEERKKLIEEV 56 (157)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHTTC-SEEEEEEECCTTCC------CSSCHHHHHHHHHHH
T ss_pred Ce-EEEeecCCCCcHHHHHHHHHHHHhc-Cccccccccccccc------ccCCHHHHHHHHHHH
Confidence 45 8999999999999999999999998 89999998876432 234455665555544
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=2.2e-14 Score=93.36 Aligned_cols=61 Identities=25% Similarity=0.250 Sum_probs=48.5
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
..+++|||||||+|.||+.+++.|.+.++ ++|++.++.+++.+. .......+|..++....
T Consensus 3 ~~~AlfgGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~~~k~----~~~~~~~~~~~~~~~~~ 64 (213)
T d1k4ma_ 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRP----QPEANSVQRKHMLELAI 64 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSC----CCSSCHHHHHHHHHHHH
T ss_pred ccEEEEecCcCcCcHHHHHHHHHHHHHcCCCEEEEEEeCCCchhc----ccccchHHHHHHHHHHh
Confidence 35899999999999999999999999874 899999999876432 33456667777766554
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.52 E-value=1.8e-14 Score=92.27 Aligned_cols=61 Identities=26% Similarity=0.241 Sum_probs=42.5
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
|+++|||||||+|.||+.+++.|++.++ +.|++.++.....+. ........+|..+.....
T Consensus 3 kIalfgGSFdP~H~GH~~ii~~a~~~~~~~~V~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 64 (189)
T d1kama_ 3 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQ---NEDYTDSFHRVEMLKLAI 64 (189)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHH
T ss_pred EEEEeccCcCCCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccc---cchhhHHHHHHHHHHhhh
Confidence 5789999999999999999999999985 677777766543322 245666677777766554
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.2e-14 Score=102.40 Aligned_cols=61 Identities=13% Similarity=0.198 Sum_probs=48.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhc-------CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHhC
Q 034677 22 GAVVLGGTFDRLHDGHRLFLKASAELAR-------DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKG 87 (87)
Q Consensus 22 ~~v~~gGtFDplH~GHl~ll~~a~~~~~-------d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (87)
.+++|||||||+|.||+.+++.|.+... +.+++.++.++. +| +...|+++|++|++.++++
T Consensus 5 ~v~l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P~~~~~--~k---~~~~s~~~Rl~Ml~la~~~ 72 (271)
T d1kr2a_ 5 VVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAY--KK---KGLIPAYHRVIMAELATKN 72 (271)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGG--CC---TTCCCHHHHHHHHHHHTTT
T ss_pred EEEEEccccCcchHHHHHHHHHHHHHHhhccccceeEEEEecCCCCC--cC---CCCCCHHHHHHHHHHHHhc
Confidence 3669999999999999999999987641 567788877654 22 4578999999999998763
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Cytosolic NMN/NAMN adenylyltransferase
species: Human (Homo sapiens), FKSG76 [TaxId: 9606]
Probab=99.35 E-value=9.1e-13 Score=89.84 Aligned_cols=59 Identities=7% Similarity=0.201 Sum_probs=43.3
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhc-CeE------EEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 23 AVVLGGTFDRLHDGHRLFLKASAELAR-DRI------VVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 23 ~v~~gGtFDplH~GHl~ll~~a~~~~~-d~v------ivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.++||||||+|.||+.+++.|.+.++ +++ ++.+..+. ++ ..+..++++|++|++..++
T Consensus 6 vl~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~~~----~~-~~~~~~~~~R~~M~~la~~ 71 (233)
T d1nuua_ 6 VLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDT----YG-KKDLAASHHRVAMARLALQ 71 (233)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEECCTT----CS-SSCCCCHHHHHHHHHHHGG
T ss_pred EEEEeeeeCccHHHHHHHHHHHHHHhCcccceeeeeEEEccCCCC----cc-cCccCCHHHHHHHHHHHHh
Confidence 568999999999999999999988752 222 22222222 21 2578999999999998875
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]
Probab=99.23 E-value=5.1e-12 Score=85.91 Aligned_cols=64 Identities=19% Similarity=0.182 Sum_probs=51.5
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhc-CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~-d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.+.|+--|||||+|.||+.+++.|++.++ |+|++.|+..++.+.. .+..+..+|.+|+...+.
T Consensus 18 ~~~~v~~f~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~p~K~~---~~~~~~~~r~~m~~~a~~ 82 (223)
T d1jhda2 18 GWSKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGKLKKGD---IPAPVRDAAIRTMAEVYF 82 (223)
T ss_dssp TCSSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECCCCTTC---CCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCCHHHHHHHHHHHHHhCcCceEEecccCCCCcCC---CccccHHHHHHHHHHhhc
Confidence 455555559999999999999999998864 8999999999876532 356788999999987654
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]
Probab=98.39 E-value=3.1e-07 Score=59.89 Aligned_cols=60 Identities=28% Similarity=0.469 Sum_probs=41.7
Q ss_pred EEcccCCCCCHHHHHHHHHHHHHh----cCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHH
Q 034677 25 VLGGTFDRLHDGHRLFLKASAELA----RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAY 84 (87)
Q Consensus 25 ~~gGtFDplH~GHl~ll~~a~~~~----~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~ 84 (87)
++=|+||-+|.||..+++++.+.. ..-+++.....+..-.+..+..+.+.++|.++++.+
T Consensus 2 vtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~~~~~~~~l~~~~~k~~~l~~~ 65 (157)
T d1mrza2 2 VSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRY 65 (157)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTT
T ss_pred EEEEcccchhHHHHHHHHHHHHHHHHcCCCceEeecCCCchheEeccccccccHHHhhhhhhcc
Confidence 455999999999999999997764 245555554333211122346789999999988653
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.65 E-value=0.0061 Score=40.93 Aligned_cols=61 Identities=21% Similarity=0.199 Sum_probs=46.5
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
+.+.|+--=|=||+|.||..+++.|++..++.|+|-+.-.+ ++ ..-.+.+.|++..+.+++
T Consensus 19 g~~~v~afqTrnp~Hr~He~i~~~a~~~~~~~lli~p~vg~----~k--~gd~~~~~~~~~~~~~~~ 79 (221)
T d1g8fa2 19 QWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL----TK--PGDIDHHTRVRVYQEIIK 79 (221)
T ss_dssp TCCCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB----CS--TTCCCHHHHHHHHHHHGG
T ss_pred CCCeEEEEecCCCCCHHHHHHHHHHHHhcCCCEEEeecccC----Cc--cccCCHHHHHHHHHHHHH
Confidence 45566656788999999999999999887566777665442 22 446899999999988765
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Thermus thermophilus [TaxId: 274]
Probab=96.25 E-value=0.013 Score=39.14 Aligned_cols=59 Identities=25% Similarity=0.271 Sum_probs=44.4
Q ss_pred ccEEEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHHh
Q 034677 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86 (87)
Q Consensus 21 ~~~v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l~ 86 (87)
.+.|+--=|=||+|.||..+.+.|++.+ |.|+|-+.-... | ..-.+.+.|++..+.+++
T Consensus 20 w~~v~aFqTrnp~Hr~He~i~~~a~~~~-~~lli~p~vG~~---k---~gd~~~~~r~~~y~~~~~ 78 (214)
T d1v47a2 20 WRKVVAFQTRNAPHRAHEYLIRLGLELA-DGVLVHPILGAK---K---PDDFPTEVIVEAYQALIR 78 (214)
T ss_dssp CCSEEEEEESSCCCHHHHHHHHHHHHHS-SEEEEEEBCSCC---C---TTSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhc-CCEEEeeeeccC---C---ccccCHHHHHHHHHHHHh
Confidence 3444433367999999999999999998 678877765431 2 457899999999888764
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Thermus thermophilus [TaxId: 274]
Probab=95.32 E-value=0.0079 Score=41.77 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=29.7
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
+-|-.|==-+|.||+.|+++|.+.+ +.++|.+--+|
T Consensus 19 i~~VPTMGaLH~GHlsLi~~a~~~~-~~vvvSIFVNP 54 (276)
T d1v8fa_ 19 VGFVPTMGYLHRGHLALVERARREN-PFVVVSVFVNP 54 (276)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHC-SEEEEEECCCG
T ss_pred EEEEcCCccHhHHHHHHHHHHHHhC-CCEEEEEEecC
Confidence 3344577779999999999999998 79999987665
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Escherichia coli [TaxId: 562]
Probab=95.25 E-value=0.0084 Score=41.78 Aligned_cols=36 Identities=36% Similarity=0.521 Sum_probs=29.2
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
+-|-.|==-+|.||+.|+++|.+.+ |.++|.+--+|
T Consensus 24 ig~VPTMGaLH~GHlsLi~~A~~~~-~~vvvSIFVNP 59 (282)
T d1ihoa_ 24 VALVPTMGNLHDGHMKLVDEAKARA-DVVVVSIFVNP 59 (282)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHHHC-SEEEEEECCCG
T ss_pred EEEEcCCcchhHHHHHHHHHHHHhC-CcEEEEEEecC
Confidence 3334566679999999999999998 79999887665
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.04 E-value=0.14 Score=34.30 Aligned_cols=60 Identities=18% Similarity=0.192 Sum_probs=41.8
Q ss_pred cccEEEEcccCCCCCHHHHHHHHHHHHHhc------CeEEEEEcCCCcccccCCCCCCCCHHHHHHHHHHHH
Q 034677 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR------DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85 (87)
Q Consensus 20 ~~~~v~~gGtFDplH~GHl~ll~~a~~~~~------d~vivgv~~d~~~~~k~~~~~i~~~~~R~~~v~~~l 85 (87)
+.+.|+--=|=||+|.||..+.+.|++.+. +.|+|-+.-.. ++ ..-.+.+.|++..+..+
T Consensus 22 gw~~VvaFqTRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~PvvG~----~k--~gD~~~~~~~~~y~~l~ 87 (235)
T d1x6va2 22 NADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGW----TK--DDDVPLMWRMKQHAAVL 87 (235)
T ss_dssp TCSEEEEEEESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEBCSC----CC--TTSCCHHHHHHHHHHHH
T ss_pred CCCeEEEeecCCCCcHHHHHHHHHHHHHHHhccccCCeEEEeecccc----CC--CCccChHHHHHHHHHHH
Confidence 345555445899999999999999998651 34666554442 21 45688999988776654
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.04 E-value=0.059 Score=37.33 Aligned_cols=37 Identities=30% Similarity=0.513 Sum_probs=29.0
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCeEEEEEcCCC
Q 034677 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (87)
Q Consensus 24 v~~gGtFDplH~GHl~ll~~a~~~~~d~vivgv~~d~ 60 (87)
+-|--|=--+|.||+.|+++|.+..++.++|.+--+|
T Consensus 32 i~~VPTMGaLH~GHlsLi~~a~~~~~~~vvvSIFVNP 68 (286)
T d2a84a1 32 VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP 68 (286)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred EEEEeCCcchhHHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 3455677889999999999999743378999986664