Citrus Sinensis ID: 034707

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
MATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA
Secondary Structure (PSIPRED)
cccccccEEcccccccHHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEEEcccccEEEEEEEEccccccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEccccccccccccHHHHHHHHHHHHHHccccEEEEcEEEEEEEEEEcccccEEEEEEEEEEccHHHHHHEEcccccccccccc
Coil and Loop (DISEMBL)
matvggvrEVEATANNQEIVNLARFAvdehnkkqqvvsgtlYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA
Flexible Loop (DISEMBL)
matvggvreveatannqeiVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKelkefntvaqshssta
Low Complexity Region (SEG)
MATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA
Disordered region (IsUnstruct)
****************QEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF***********
Disordered Region (DISOPRED)
*ATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN**********
Disordered Region (DISEMBL)
MATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF***********
Disordered Region (DISPRO)
*ATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNT*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATVGGVREVEATANNQEIVNLARFAVDEHNKKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
Q06445	97	Cysteine proteinase inhib	N/A	no	0.941	0.835	0.578	5e-23
Q8H0X6	234	Cysteine proteinase inhib	yes	no	1.0	0.367	0.52	1e-21
Q0JNR2	250	Cysteine proteinase inhib	yes	no	0.953	0.328	0.479	1e-18
P09229	140	Cysteine proteinase inhib	no	no	0.906	0.557	0.537	2e-18
Q41906	125	Cysteine proteinase inhib	no	no	0.837	0.576	0.523	1e-17
P31726	135	Cystatin-1 OS=Zea mays GN	N/A	no	0.930	0.592	0.457	1e-16
Q10992	82	Cysteine proteinase inhib	N/A	no	0.767	0.804	0.562	2e-15
Q945Q1	101	Cysteine proteinase inhib	no	no	0.848	0.722	0.459	3e-15
Q8LC76	232	Cysteine proteinase inhib	no	no	0.779	0.288	0.456	1e-14
Q9LEI7	107	Cysteine proteinase inhib	N/A	no	0.755	0.607	0.493	3e-13

>sp|Q06445|CYTI_VIGUN Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 14/95 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MA +GG R+V    N+ EI +LARFAV+EHNKKQ              QVVSGTLY ITL
Sbjct: 1  MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
          EA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct: 61 EAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95

Vigna unguiculata (taxid: 3917)

>sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 14/100 (14%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
           MA VGGV +V A  N+ E+ +LARFAVDEHNKK+              QVV+GTL+ +TL
Sbjct: 34  MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTL 93

Query: 47  EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 86
           E +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct: 94  EILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0JNR2|CYT12_ORYSJ Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 14/96 (14%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNK--------------KQQVVSGTLYDITLEAV 49
           +GG  +  + AN+ E   LARFAVDEHNK              K+QVV+GTL+ +TLEA+
Sbjct: 48  LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEAL 107

Query: 50  EGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 85
           E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct: 108 EAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P09229|CYT1_ORYSJ Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 58/93 (62%), Gaps = 15/93 (16%)

Query: 3   TVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEA 48
            +GGV  V    N+  +V+LARFAV EHNKK              QQVV+GTLY  T+E 
Sbjct: 46  VLGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEV 104

Query: 49  VEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
            EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct: 105 KEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137

There are two distinct cystatins in rice seeds (Oryzacystatin-1 and -2) with different specificities against cysteine proteinases. May be involved in the control of germination by inhibition of endogenous cysteine proteinases. May play a role in defense by inhibiting exogenous proteases such as those present in digestive tracks of insects and nematodes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q41906|CYT3_ARATH Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 14/86 (16%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAV 49
           +GGV ++    N+ EI +LARFA+ EHNK+Q              QVV+GT+Y +TLEA 
Sbjct: 35  LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAK 94

Query: 50  EGGQKKLFEAKVWEKPWMQFKELKEF 75
           EG Q K FEAKVW KPWM FK+L+EF
Sbjct: 95  EGDQTKNFEAKVWVKPWMNFKQLQEF 120

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Arabidopsis thaliana (taxid: 3702)

>sp|P31726|CYT1_MAIZE Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 14/94 (14%)

Query: 5   GGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVE 50
           GG+++V A  N+ ++  LARFAV+EHN+K               QVV+GT+Y +T+E  +
Sbjct: 42  GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKD 101

Query: 51  GGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 84
           G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct: 102 GEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135

Zea mays (taxid: 4577)

>sp|Q10992|CYTA_HELAN Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 50/80 (62%), Gaps = 14/80 (17%)

Query: 18 EIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAVEGGQKKLFEAKVWE 63
          EI  LARFAVDEHNKKQ              QVV+G +Y ITLEA  GG KK +EAKVW 
Sbjct: 3  EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWV 62

Query: 64 KPWMQFKELKEFNTVAQSHS 83
          KPW  FKEL+EF  V  + S
Sbjct: 63 KPWENFKELQEFKPVDAATS 82

Strong inhibitor of papain and ficin but poor inhibitor of cathepsin H, B and L.

Helianthus annuus (taxid: 4232)

>sp|Q945Q1|CYT1_ARATH Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 14/87 (16%)

Query: 4  VGGVREVEATANNQEIVNLARFAVDEHNK--------------KQQVVSGTLYDITLEAV 49
          VGGVR+++A AN+ ++ +LARFAVDEHNK              K QVV+GT++ +T+E  
Sbjct: 10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVA 69

Query: 50 EGGQKKLFEAKVWEKPWMQFKELKEFN 76
          +G   K++EAKV EK W   K+L+ FN
Sbjct: 70 DGETNKVYEAKVLEKAWENLKQLESFN 96

Involved in suppression of hypersensitive cell death activated by either avirulent pathogen or oxidative stress.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 14/81 (17%)

Query: 17  QEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAVEGGQKKLFEAKVW 62
           +EI ++A FAV EHN+++              QVV+G LY +TLE +E G+KK++EAKVW
Sbjct: 59  KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVW 118

Query: 63  EKPWMQFKELKEFNTVAQSHS 83
            KPWM FK+L+EF  +  S +
Sbjct: 119 VKPWMNFKQLQEFKNIIPSFT 139

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LEI7|CYT1_HORVU Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 14/79 (17%)

Query: 15  NNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAK 60
           N+ E + LARFAV EHN K              QQVV+G ++  T+E  EGG KKL+EAK
Sbjct: 29  NDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAK 88

Query: 61  VWEKPWMQFKELKEFNTVA 79
           VWEK W  FK+L+EF   A
Sbjct: 89  VWEKAWENFKQLQEFKPAA 107

Inhibits papain, ficin, cathepsin B and, to a lesser extent, chymopapain, but is inactive against bromelain. Inhibits the growth of pathogenic fungi. Regulated by the DOF transcription factors SAD (activator) and BPBF (repressor).

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
8099682	101	cysteine protease inhibitor [Manihot esc	0.988	0.841	0.535	1e-22
110631504	98	cysteine proteinase inhibitor [Pelargoni	0.976	0.857	0.561	3e-22
255564458	101	Cysteine proteinase inhibitor, putative	1.0	0.851	0.51	4e-22
268321205	101	latex cystatin [Hevea brasiliensis]	0.988	0.841	0.515	5e-22
224054226	101	predicted protein [Populus trichocarpa]	1.0	0.851	0.54	5e-22
282848226	106	multicystatin/cysteine protease inhibito	0.988	0.801	0.515	1e-21
110748606	247	cystatin [Amaranthus hypochondriacus]	1.0	0.348	0.53	2e-21
1169196	97	RecName: Full=Cysteine proteinase inhibi	0.941	0.835	0.578	2e-21
42600879	95	cysteine proteinase inhibitor [Aegiceras	0.941	0.852	0.578	3e-21
388506102	98	unknown [Lotus japonicus]	0.965	0.846	0.546	5e-21

>gi|8099682|gb|AAF72202.1|AF265551_1 cysteine protease inhibitor [Manihot esculenta]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 14/99 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MAT+GG++EVE +AN+ EI NLARFAVD++NKKQ              QVV+GT+Y ITL
Sbjct: 1  MATLGGIKEVEESANSVEIDNLARFAVDDYNKKQNALLEFKRVVSTKQQVVAGTMYYITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 85
          E  +GGQ K++EAKVWEKPW+ FKE++EF  +  + S +
Sbjct: 61 EVADGGQTKVYEAKVWEKPWLNFKEVQEFKPIGVAPSDS 99

Source: Manihot esculenta

Species: Manihot esculenta

Genus: Manihot

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110631504|gb|ABG81097.1| cysteine proteinase inhibitor [Pelargonium x hortorum]

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 14/98 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          M TVGG+ E   T N+ +I  LARFAVDEHNKKQ              QVV+GT+Y ITL
Sbjct: 1  MTTVGGISETPGTQNSLQIDALARFAVDEHNKKQNTLLQFGGVVSVKQQVVAGTMYYITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 84
          EA++G +KKL+EAKVWEKPWM FKEL+EF  V  + S+
Sbjct: 61 EAMDGDKKKLYEAKVWEKPWMNFKELQEFKPVGDASSA 98

Source: Pelargonium x hortorum

Species: Pelargonium x hortorum

Genus: Pelargonium

Family: Geraniaceae

Order: Geraniales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564458|ref|XP_002523225.1| Cysteine proteinase inhibitor, putative [Ricinus communis] gi|223537521|gb|EEF39146.1| Cysteine proteinase inhibitor, putative [Ricinus communis]

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 72/100 (72%), Gaps = 14/100 (14%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
           MAT GG++EV+ +AN+ EI +LARFAVD++NKKQ              QVV+GT+Y ITL
Sbjct: 1   MATAGGIQEVQGSANSVEIDSLARFAVDDYNKKQNALLEYKKVVNAKQQVVAGTMYYITL 60

Query: 47  EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 86
           E ++GG KK++EAK+WEKPW+ FKE++EF  +  + S T+
Sbjct: 61  EVMDGGHKKVYEAKIWEKPWLNFKEVQEFKLIGDAPSETS 100

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|268321205|gb|ACZ02398.1| latex cystatin [Hevea brasiliensis]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 14/99 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MA +GGV+EVE +AN+ EI +LAR+AVD++N+KQ              QVV+GT+Y ITL
Sbjct: 1  MAKLGGVKEVEGSANSVEINSLARYAVDDYNQKQNALLEFKKVVNAKQQVVAGTIYYITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 85
          E ++GGQKK++EAKVWEKPW+ FKE++EF  +  + S +
Sbjct: 61 EVIDGGQKKVYEAKVWEKPWLNFKEVQEFKLIGDAPSDS 99

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054226|ref|XP_002298154.1| predicted protein [Populus trichocarpa] gi|222845412|gb|EEE82959.1| predicted protein [Populus trichocarpa]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 69/100 (69%), Gaps = 14/100 (14%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
           MATVGG+ EVE TAN+ EI +LARFAVD++NKKQ              QVV+GT+Y IT 
Sbjct: 1   MATVGGITEVEGTANSLEIDSLARFAVDDYNKKQNSVLEFKRVLNAKQQVVAGTIYYITF 60

Query: 47  EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 86
           E  EGG KK++EAKVW KPW+ FKE++EF  VA +   ++
Sbjct: 61  EVTEGGHKKVYEAKVWVKPWLNFKEVQEFKLVADAPCDSS 100

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|282848226|gb|ADB02894.1| multicystatin/cysteine protease inhibitor [Jatropha curcas]

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 70/99 (70%), Gaps = 14/99 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MATVGG++EVE  AN+ EI  LARFAVD++NKKQ              QVV+GT+Y ITL
Sbjct: 1  MATVGGIKEVEGFANSVEIDGLARFAVDDYNKKQNALLEYKRVVNAKQQVVAGTIYYITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 85
          E  +GGQKK++EAK+WEKPW+ FK+++EF  +  + + +
Sbjct: 61 EVEDGGQKKVYEAKIWEKPWLNFKDVQEFKLIGDAPTQS 99

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110748606|gb|ABG89856.1| cystatin [Amaranthus hypochondriacus]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 14/100 (14%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
           MAT+GG+RE +  AN+ EI +LARFAVDEHNKK+              QVV+GTL+  T+
Sbjct: 42  MATLGGLRESQGAANDAEIESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHFTI 101

Query: 47  EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 86
           EA++ G+KKL++AKVW KPWM FKEL+EF     S S T+
Sbjct: 102 EAIDAGKKKLYDAKVWVKPWMNFKELQEFKHTEDSPSFTS 141

Source: Amaranthus hypochondriacus

Species: Amaranthus hypochondriacus

Genus: Amaranthus

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1169196|sp|Q06445.1|CYTI_VIGUN RecName: Full=Cysteine proteinase inhibitor; AltName: Full=Cystatin gi|288188|emb|CAA79954.1| cysteine proteinase inhibitor [Vigna unguiculata]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 14/95 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MA +GG R+V    N+ EI +LARFAV+EHNKKQ              QVVSGTLY ITL
Sbjct: 1  MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
          EA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct: 61 EAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95

Source: Vigna unguiculata

Species: Vigna unguiculata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42600879|gb|AAS21216.1| cysteine proteinase inhibitor [Aegiceras corniculatum]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 14/95 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MA VGG+ E E +AN+ E+  LARFAVD+HNKKQ              QVVSGTLY ITL
Sbjct: 1  MAKVGGIHEKEGSANSVEMDELARFAVDQHNKKQNALLEFVKVVNVKEQVVSGTLYYITL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
          EA  GGQKKL+EAKVW KPWM FKEL++F   + +
Sbjct: 61 EATGGGQKKLYEAKVWVKPWMNFKELQDFQLASDA 95

Source: Aegiceras corniculatum

Species: Aegiceras corniculatum

Genus: Aegiceras

Family: Primulaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506102|gb|AFK41117.1| unknown [Lotus japonicus]

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 14/97 (14%)

Query: 1  MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
          MA VGG  EV    N+ EI NLARFAV+EHNKKQ              QVV+GTLY I L
Sbjct: 1  MAAVGGASEVPGNQNSLEIENLARFAVEEHNKKQNTLLEFGKVVSATQQVVAGTLYKIKL 60

Query: 47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHS 83
          EA +GG+K+++EAK+WEKPW+ FKEL+EFN V  + +
Sbjct: 61 EANDGGKKQVYEAKIWEKPWLNFKELQEFNLVGDASA 97

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
TAIR|locus:2092492	234	CYSB "cystatin B" [Arabidopsis	1.0	0.367	0.52	1.7e-20
TAIR|locus:2058515	125	CYSA "cystatin A" [Arabidopsis	0.837	0.576	0.523	4.1e-17
TAIR|locus:2177063	101	CYS1 "cystatin-1" [Arabidopsis	0.848	0.722	0.459	8.8e-15
TAIR|locus:2175294	232	AT5G05110 [Arabidopsis thalian	0.906	0.336	0.430	3e-14
UNIPROTKB|Q6TPK4	116	Q6TPK4 "Cysteine proteinase in	0.895	0.663	0.369	6.6e-10
TAIR|locus:2130709	117	AT4G16500 [Arabidopsis thalian	0.848	0.623	0.352	1.4e-07
TAIR|locus:2168973	122	AT5G47550 [Arabidopsis thalian	0.848	0.598	0.359	1.4e-07

TAIR|locus:2092492 CYSB "cystatin B" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 52/100 (52%), Positives = 68/100 (68%)

Query:     1 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
             MA VGGV +V A  N+ E+ +LARFAVDEHNKK+              QVV+GTL+ +TL
Sbjct:    34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTL 93

Query:    47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 86
             E +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:    94 EILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006972 "hyperosmotic response" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0050897 "cobalt ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2058515 CYSA "cystatin A" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query:     4 VGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAV 49
             +GGV ++    N+ EI +LARFA+ EHNK+Q              QVV+GT+Y +TLEA 
Sbjct:    35 LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAK 94

Query:    50 EGGQKKLFEAKVWEKPWMQFKELKEF 75
             EG Q K FEAKVW KPWM FK+L+EF
Sbjct:    95 EGDQTKNFEAKVWVKPWMNFKQLQEF 120

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006972 "hyperosmotic response" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

TAIR|locus:2177063 CYS1 "cystatin-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 40/87 (45%), Positives = 57/87 (65%)

Query:     4 VGGVREVEATANNQEIVNLARFAVDEHNK--------------KQQVVSGTLYDITLEAV 49
             VGGVR+++A AN+ ++ +LARFAVDEHNK              K QVV+GT++ +T+E  
Sbjct:    10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVA 69

Query:    50 EGGQKKLFEAKVWEKPWMQFKELKEFN 76
             +G   K++EAKV EK W   K+L+ FN
Sbjct:    70 DGETNKVYEAKVLEKAWENLKQLESFN 96

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0070417 "cellular response to cold" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2175294 AT5G05110 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 40/93 (43%), Positives = 58/93 (62%)

Query:     4 VGGVREVEATANN-QEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEA 48
             +GG  + +   N  +EI ++A FAV EHN+++              QVV+G LY +TLE 
Sbjct:    45 LGGFSDSKNDWNGGKEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEV 104

Query:    49 VEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
             +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   105 IEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

UNIPROTKB|Q6TPK4 Q6TPK4 "Cysteine proteinase inhibitor 1" [Actinidia deliciosa (taxid:3627)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 34/92 (36%), Positives = 50/92 (54%)

Query:     1 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITL 46
             +   GG R +E+  N+ E+ ++A+FAV EHNK+               QVV+GT Y + +
Sbjct:    26 LVAAGGWRPIESL-NSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVI 84

Query:    47 EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 78
              A +G     +EA VW+KPWM F+ L  F  V
Sbjct:    85 AAKDGAVVGNYEAVVWDKPWMHFRNLTSFRKV 116

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IDA

TAIR|locus:2130709 AT4G16500 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 31/88 (35%), Positives = 49/88 (55%)

Query:     6 GVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAVEG 51
             G R+     ++ ++V +A++A++EHNK+               QVVSGT YD+ + A +G
Sbjct:    30 GSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDG 89

Query:    52 GQK-KLFEAKVWEKPWMQFKELKEFNTV 78
             G K K +EA V EK W+  K L+ F  +
Sbjct:    90 GGKIKNYEAVVVEKLWLHSKSLESFKAL 117

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0030234 "enzyme regulator activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2168973 AT5G47550 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%)

Query:     2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLE 47
             A VGG   + +   + ++V +  FAV E+NK+               QVVSGT Y + + 
Sbjct:    26 ARVGGWSPI-SNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVA 84

Query:    48 AVEG-GQKKLFEAKVWEKPWMQFKELKEF 75
             A +G G  K + A VW+KPWM+F+ L  F
Sbjct:    85 ANDGDGVSKNYLAIVWDKPWMKFRNLTSF 113


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.125   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 23  0.49    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  516 (55 KB)
  Total size of DFA:  102 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.11u 0.10s 10.21t   Elapsed:  00:00:00
  Total cpu time:  10.12u 0.10s 10.22t   Elapsed:  00:00:00
  Start:  Thu May  9 23:27:38 2013   End:  Thu May  9 23:27:38 2013

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q06445	CYTI_VIGUN	No assigned EC number	0.5789	0.9418	0.8350	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00011145 hypothetical protein (102 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	86
cd00042	105	cd00042, CY, Cystatin-like domain; Cystatins are a	1e-15
smart00043	107	smart00043, CY, Cystatin-like domain	2e-14
pfam00031	92	pfam00031, Cystatin, Cystatin domain	4e-06

>gnl|CDD|238002 cd00042, CY, Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins

 Score = 65.2 bits (159), Expect = 1e-15
 Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 36/107 (33%)

Query: 5   GGVREVEATANNQEIVNLARFAVDEHNKK---------------QQVVSGTLYDITLEAV 49
           GG  ++ A  N+ E+  LA FAV E+NKK                QVV+GT Y IT+EA 
Sbjct: 1   GGPSDIPA--NDPEVQELADFAVAEYNKKSNDKYLEFFKVLSAKSQVVAGTNYYITVEAG 58

Query: 50  EG-------------------GQKKLFEAKVWEKPWMQFKELKEFNT 77
           +                    G+KK   AKVWEKPW  FKEL  F  
Sbjct: 59  DTNCKKSSVPLDCPDCKLLEEGKKKFCTAKVWEKPWENFKELLSFKC 105

However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains. Length = 105

>gnl|CDD|214484 smart00043, CY, Cystatin-like domain

 Score = 62.4 bits (152), Expect = 2e-14
 Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 34/105 (32%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLE 47
           +GG  +V    N+ E+   A FAV E+NKK                 QVV+GT Y + +E
Sbjct: 3   LGGPSDVPP--NDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVE 60

Query: 48  AVEGGQKKL----------------FEAKVWEKPWMQFKELKEFN 76
             E   KKL                  AKVWEKPW    +L EF 
Sbjct: 61  VGETNCKKLSVDLENCPFLDQGEKFCTAKVWEKPWENKIKLVEFK 105

Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains. Length = 107

>gnl|CDD|215667 pfam00031, Cystatin, Cystatin domain

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 21/93 (22%)

Query: 5  GGVREVEATANNQEIVNLARFAVDEHNKK---------------QQVVSGTLYDITLEAV 49
          GG+       N+ E+     FA+ ++N K                QVV+G  Y I +E  
Sbjct: 1  GGLSPAND--NDPEVQEALDFALAKYNAKSNNYYFELVEVLRAKSQVVAGMNYYIKVEVG 58

Query: 50 EG---GQKKLFEAKVW-EKPWMQFKELKEFNTV 78
          E      KK  E     ++    F + + F   
Sbjct: 59 ETNCSKSKKDLEDCPLLDEKQEGFCKAQVFKKP 91

Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 are related to this family but have not been included. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
smart00043	107	CY Cystatin-like domain. Cystatins are a family of	99.84
cd00042	105	CY Substituted updates: Jan 30, 2002	99.83
PF00031	94	Cystatin: Cystatin domain; InterPro: IPR000010 Pep	99.73
PF07430	202	PP1: Phloem filament protein PP1; InterPro: IPR009	99.46
PF07430	202	PP1: Phloem filament protein PP1; InterPro: IPR009	99.07
TIGR01638	92	Atha_cystat_rel Arabidopsis thaliana cystatin-rela	97.18

>smart00043 CY Cystatin-like domain

Probab=99.84  E-value=1.1e-20  Score=118.87  Aligned_cols=73  Identities=47%  Similarity=0.687  Sum_probs=66.2

Q ss_pred             ccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecCCce------------
Q 034707            3 TVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEGGQK------------   54 (86)
Q Consensus         3 ~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~~~~------------   54 (86)
                      ++|||.++  +.+||+++++++||+.+||++                +|||+|++|+|++++.++.-.            
T Consensus         2 ~~Gg~~~~--~~~d~~~~~~~~~a~~~~N~~~~~~~~~~~~~v~~a~~QvvaG~~y~l~~~v~~t~C~k~~~~~~~C~~~   79 (107)
T smart00043        2 CLGGPSDV--PPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLSVDLENCPFL   79 (107)
T ss_pred             CCCCCccC--CCCCHHHHHHHHHHHHHHHHhcccchhhhhhhhheeeeeeecceEEEEEEEEEeceeccCCcccccCCCC
Confidence            57999999  789999999999999999987                999999999999999875221            


Q ss_pred             ----EEEEEEEEeccCCCceeEEEEEe
Q 034707           55 ----KLFEAKVWEKPWMQFKELKEFNT   77 (86)
Q Consensus        55 ----~~y~a~Vw~~pw~n~~~L~sf~~   77 (86)
                          ..|.++||.+||++..+|++|+|
T Consensus        80 ~~~~~~C~~~V~~~pw~~~~~~~~~~C  106 (107)
T smart00043       80 DQGEKFCTAKVWEKPWENKIKLVEFKC  106 (107)
T ss_pred             CCCccEEEEEEEecCCCCccCccceec
Confidence                48999999999999999999986

Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.

>cd00042 CY Substituted updates: Jan 30, 2002

Probab=99.83  E-value=2.4e-20  Score=116.82  Aligned_cols=71  Identities=56%  Similarity=0.870  Sum_probs=66.1

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc---------------CceeeeeEEEEEEEEecC------------------
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK---------------QQVVSGTLYDITLEAVEG------------------   51 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~---------------~QVVaG~nY~l~v~~~~~------------------   51 (86)
                      |||.++  +++||+++++++||+.+||+.               +|||+|++|+|++++.++                  
T Consensus         1 gg~~~~--~~~d~~~~~~~~~a~~~~N~~~~~~~~~~~~i~~~~~QvvaG~~y~i~~~~~~t~C~k~~~~~~~~~c~~~~   78 (105)
T cd00042           1 GGPSDI--PANDPEVQELADFAVAEYNKKSNDKYLEFFKVLSAKSQVVAGTNYYITVEAGDTNCKKSSVPLDCPDCKLLE   78 (105)
T ss_pred             CCCccC--CCCCHHHHHHHHHHHHHHHhhcCccceeEEEEEEEEEEEEeeeEEEEEEEEecccccccCcccccccccccc
Confidence            899988  799999999999999999887               899999999999999874                  


Q ss_pred             -CceEEEEEEEEeccCCCceeEEEEEe
Q 034707           52 -GQKKLFEAKVWEKPWMQFKELKEFNT   77 (86)
Q Consensus        52 -~~~~~y~a~Vw~~pw~n~~~L~sf~~   77 (86)
                       +....|.+.||++||++.++|++|.|
T Consensus        79 ~~~~~~C~~~V~~~pw~~~~~l~~~~C  105 (105)
T cd00042          79 EGKKKFCTAKVWEKPWENFKELLSFKC  105 (105)
T ss_pred             cCCCEEEEEEEEecCCCCceeeeeccC
Confidence             56889999999999999999999875

>PF00031 Cystatin: Cystatin domain; InterPro: IPR000010 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=99.73  E-value=1e-17  Score=102.87  Aligned_cols=60  Identities=40%  Similarity=0.687  Sum_probs=55.5

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC-----------------
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG-----------------   51 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~-----------------   51 (86)
                      |||+++  +++||+++++++||+.+||++                +|||+|++|+|++++.++                 
T Consensus         1 Gg~~~~--~~~dp~v~~~~~~al~~~N~~~~~~~~~~~~~v~~a~~QvV~G~~Y~i~~~~~~t~C~k~~~~~~~C~~~~~   78 (94)
T PF00031_consen    1 GGPSPV--DPNDPEVQEAAEFALDKFNEQSNSGYKFKLVKVISATTQVVAGINYYIEFEVGETNCKKSSKDFENCPFQEE   78 (94)
T ss_dssp             SSEEEE--CTTSHHHHHHHHHHHHHHHHHSTTSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETCEEEEEECEBEST
T ss_pred             CCCccC--CCCCHHHHHHHHHHHHHHHHhCcccCcceeeeeeEEEEeecCCceEEEEEEEEcccccccccccccCCcccc
Confidence            899999  789999999999999999988                999999999999998773                 


Q ss_pred             -CceEEEEEEEEeccC
Q 034707           52 -GQKKLFEAKVWEKPW   66 (86)
Q Consensus        52 -~~~~~y~a~Vw~~pw   66 (86)
                       .....|.++||++||
T Consensus        79 ~~~~~~C~~~v~~~pW   94 (94)
T PF00031_consen   79 QPWTKFCKFTVWERPW   94 (94)
T ss_dssp             TSSEEEEEEEEEEECG
T ss_pred             CCceeeEEEEEEECCC
Confidence             457899999999999

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The cystatins are cysteine proteinase inhibitors belonging to MEROPS inhibitor family I25, clan IH [, , ]. They mainly inhibit peptidases belonging to peptidase families C1 (papain family) and C13 (legumain family). The cystatin family includes: The Type 1 cystatins, which are intracellular cystatins that are present in the cytosol of many cell types, but can also appear in body fluids at significant concentrations. They are single-chain polypeptides of about 100 residues, which have neither disulphide bonds nor carbohydrate side chains. The Type 2 cystatins, which are mainly extracellular secreted polypeptides synthesised with a 19-28 residue signal peptide. They are broadly distributed and found in most body fluids. The Type 3 cystatins, which are multidomain proteins. The mammalian representatives of this group are the kininogens. There are three different kininogens in mammals: H- (high molecular mass, IPR002395 from INTERPRO) and L- (low molecular mass) kininogen which are found in a number of species, and T-kininogen that is found only in rat. Unclassified cystatins. These are cystatin-like proteins found in a range of organisms: plant phytocystatins, fetuin in mammals, insect cystatins and a puff adder venom cystatin which inhibits metalloproteases of the MEROPS peptidase family M12 (astacin/adamalysin). Also a number of the cystatins-like proteins have been shown to be devoid of inhibitory activity. All true cystatins inhibit cysteine peptidases of the papain family (MEROPS peptidase family C1), and some also inhibit legumain family enzymes (MEROPS peptidase family C13). These peptidases play key roles in physiological processes, such as intracellular protein degradation (cathepsins B, H and L), are pivotal in the remodelling of bone (cathepsin K), and may be important in the control of antigen presentation (cathepsin S, mammalian legumain). Moreover, the activities of such peptidases are increased in pathophysiological conditions, such as cancer metastasis and inflammation. Additionally, such peptidases are essential for several pathogenic parasites and bacteria. Thus in animals cystatins not only have capacity to regulate normal body processes and perhaps cause disease when down-regulated, but in other organisms may also participate in defence against biotic and abiotic stress. ; GO: 0004869 cysteine-type endopeptidase inhibitor activity; PDB: 3L0R_B 2W9P_K 2W9Q_A 3S67_A 3QRD_D 1R4C_G 3GAX_A 1TIJ_B 1G96_A 3NX0_A ....

>PF07430 PP1: Phloem filament protein PP1; InterPro: IPR009994 This domain represents a conserved region approximately 200 residues long, four copies of which are found within the plant phloem filament protein PP1

Probab=99.46  E-value=3.2e-13  Score=93.76  Aligned_cols=71  Identities=35%  Similarity=0.478  Sum_probs=60.5

Q ss_pred             cccceeccCCCCCHHHHHHHHHHHHHhccc-------------Cceee--eeEEEEEEEEecC-CceEEEEEEEEecc-C
Q 034707            4 VGGVREVEATANNQEIVNLARFAVDEHNKK-------------QQVVS--GTLYDITLEAVEG-GQKKLFEAKVWEKP-W   66 (86)
Q Consensus         4 ~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~-------------~QVVa--G~nY~l~v~~~~~-~~~~~y~a~Vw~~p-w   66 (86)
                      ..+|.++. |+++|+||+|++|||.|||+.             .|=++  |++|+|++.+.|+ |+...|+|+||+++ |
T Consensus       114 ~~~Wi~I~-nin~p~VQeLgkFAV~EhNK~gd~LkF~KV~eGw~q~l~~d~ikYrLhI~AkDg~G~~~~YeAvV~~k~~~  192 (202)
T PF07430_consen  114 SKKWIPIP-NINNPFVQELGKFAVIEHNKAGDKLKFEKVYEGWYQDLGNDGIKYRLHIVAKDGLGRLGNYEAVVWEKQFL  192 (202)
T ss_pred             cCCCEECC-CCCcHHHHHHHHHHHHHHhhcCCceEEEEEeeEEEEeccCCCceEEEEEEeecCCCCcCceEEEEEEeccC
Confidence            46899998 999999999999999999966             56554  6999999999998 99999999999984 6


Q ss_pred             CCc-eeEEEE
Q 034707           67 MQF-KELKEF   75 (86)
Q Consensus        67 ~n~-~~L~sf   75 (86)
                      .+. +-|.||
T Consensus       193 sk~i~i~~sf  202 (202)
T PF07430_consen  193 SKKIKILESF  202 (202)
T ss_pred             cceEEEEecC
Confidence            654 555554

This is one of the constituents of the proteinaceous filaments found in the sieve elements of Cucurbita phloem [].

>PF07430 PP1: Phloem filament protein PP1; InterPro: IPR009994 This domain represents a conserved region approximately 200 residues long, four copies of which are found within the plant phloem filament protein PP1

Probab=99.07  E-value=1.3e-10  Score=80.84  Aligned_cols=76  Identities=14%  Similarity=0.266  Sum_probs=68.1

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEec-CCceEEEEEEEEec
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVE-GGQKKLFEAKVWEK   64 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~-~~~~~~y~a~Vw~~   64 (86)
                      +..+||.++. |+.+|.+|++++|+|.+++.+                .|.+.+++|||.|++.| -|....|+++|+++
T Consensus         5 ~~~~~w~~ip-~v~~~~~q~v~~~~veq~k~~~~~~l~~~~v~egwy~el~~~~~~yrlhv~a~d~l~r~l~~e~ii~e~   83 (202)
T PF07430_consen    5 PFSPKWIKIP-DVKEPCLQEVAKFAVEQFKIQYGDSLKFRSVVEGWYFELCPNSLKYRLHVKAIDFLGRSLKYEAIIIEE   83 (202)
T ss_pred             ccCcccccCC-cccchHHHHHHHHHHHHHhhhcccceeeeeeeeceeecccccceeEEEeehhhhhhccccceeeeeeeh
Confidence            3569999998 999999999999999998887                67889999999999988 47889999999998


Q ss_pred             c--CCCceeEEEEEec
Q 034707           65 P--WMQFKELKEFNTV   78 (86)
Q Consensus        65 p--w~n~~~L~sf~~~   78 (86)
                      -  |++.++|.||--+
T Consensus        84 ~~~~~~~~kl~s~l~~   99 (202)
T PF07430_consen   84 KPQLTRIRKLASILAI   99 (202)
T ss_pred             hhhhhhhhhhheeeEE
Confidence            5  9999999998543

This is one of the constituents of the proteinaceous filaments found in the sieve elements of Cucurbita phloem [].

>TIGR01638 Atha_cystat_rel Arabidopsis thaliana cystatin-related protein

Probab=97.18  E-value=0.00059  Score=42.73  Aligned_cols=50  Identities=22%  Similarity=0.129  Sum_probs=40.0

Q ss_pred             CCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecC--C-ceEEEEEEEEe
Q 034707           14 ANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEG--G-QKKLFEAKVWE   63 (86)
Q Consensus        14 ~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~--~-~~~~y~a~Vw~   63 (86)
                      .+..-+.+++++|+++||..              .|..+|..|.|++.+.|.  + ..+.|.+.||-
T Consensus        10 T~rd~~~~la~~al~k~N~~~~t~lEfV~vVrAn~~~~~g~~~yITF~Ard~~d~p~~e~~q~~v~~   76 (92)
T TIGR01638        10 TNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVY   76 (92)
T ss_pred             CHHHHHHHHHHHHHHHhhhhcCceEEEEEEEEEEeeccceEEEEEEEEEecCCCCCHHHhhheeeEe
Confidence            34556689999999999976              889999999999999883  3 34566777766

This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam model pfam00031. Cystatins may help plants resist attack by insects.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
1eqk_A	102	Solution Structure Of Oryzacystatin-I, A Cysteine P		2e-19
3ima_B	91	Complex Strcuture Of Tarocystatin And Papain Length		9e-18
3ul5_A	139	Saccharum Officinarum Canecystatin-1 In Space Group		3e-13
2l4v_A	135	Three Dimensional Structure Of Pineapple Cystatin L		9e-12
2w9p_A	87	Crystal Structure Of Potato Multicystatin Length =		1e-09

>pdb|1EQK|A Chain A, Solution Structure Of Oryzacystatin-I, A Cysteine Proteinase Inhibitor Of The Rice, Oryza Sativa L. Japonica Length = 102

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Query: 2  ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLE 47
            +GGV  V    N+  +V+LARFAV EHNKK              QQVV+GTLY  T+E
Sbjct: 7  PVLGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIE 65
Query: 48 AVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
            EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct: 66 VKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 99

>pdb|3IMA|B Chain B, Complex Strcuture Of Tarocystatin And Papain Length = 91

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 14/91 (15%)
Query: 2  ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLE 47
          A +GG+ +VE   N+ E+  LARFAVDEHNKK              QQVVSG ++ +T+E
Sbjct: 1  ALMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVE 60
Query: 48 AVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 78
           +EGG+KK++EAKVW + W+  K+L EF+ +
Sbjct: 61 VIEGGKKKVYEAKVWVQAWLNSKKLHEFSPI 91

>pdb|3UL5|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group C2221 Length = 139

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 16/97 (16%)
Query: 1   MATVGGVREVEATA-NNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDIT 45
           +  VG VR+  A   N+ E + LARFAV EHN K               QVV+GT++  T
Sbjct: 43  VGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFT 102
Query: 46  LEAVE-GGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
           ++  E GG KKL+EAKVWEK W  FK+L+ F  V  +
Sbjct: 103 VQVKEAGGGKKLYEAKVWEKVWENFKQLQSFQPVGDA 139

>pdb|2L4V|A Chain A, Three Dimensional Structure Of Pineapple Cystatin Length = 135

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 19/97 (19%)
Query: 2   ATVGGVREVEATANNQ---EIVNLARFAVDEHNKK--------------QQVVSGTLYDI 44
             +GG+   +A  NN+   +  +LARFAV E+N K              +QVVSG ++ +
Sbjct: 41  PIMGGI--YDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYL 98
Query: 45  TLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
           T+E  + G+KKL+EAKVWE+ WM F++L+EF  +  +
Sbjct: 99  TVEVNDAGKKKLYEAKVWEQVWMNFRQLQEFTYLGDA 135

>pdb|2W9P|A Chain A, Crystal Structure Of Potato Multicystatin Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 15/81 (18%)
Query: 13 TANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAVE-GGQKKLF 57
            NN +   LARFA+ ++NKKQ              QVV+G +Y ITL A +  G+KK++
Sbjct: 7  NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIY 66
Query: 58 EAKVWEKPWMQFKELKEFNTV 78
          +AK+W K W  FK++ EF  V
Sbjct: 67 KAKIWVKEWEDFKKVVEFKLV 87

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
3ima_B	91	Cysteine proteinase inhibitor; cystatin, tarocysta	3e-25
2l4v_A	135	Cystatin; protease inhibitor, hydrolase inhibitor;	8e-25
1eqk_A	102	Oryzacystatin-I; alpha and beta proteins, cystatin	1e-23
2w9q_A	87	Multicystatin; protease inhibitor, thiol protease	1e-21
3l0r_A	115	Cystatin-2, OMC2; SOFT TICK, protease inhibitor, t	8e-15
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	5e-11
3mwz_A	115	Sialostatin L2; antiparallel beta-sheet, hydrolase	7e-11
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	2e-10
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	3e-10
1roa_A	122	Cystatin D; inhibitor of cysteine pepidases, prote	6e-10
2kxg_A	95	Aspartic protease inhibitor; sqapi, protein, hydro	3e-07

>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} Length = 91

 Score = 88.8 bits (220), Expect = 3e-25
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 14/91 (15%)

Query: 2  ATVGGVREVEATANNQEIVNLARFAVDEHNK--------------KQQVVSGTLYDITLE 47
          A +GG+ +VE   N+ E+  LARFAVDEHNK              KQQVVSG ++ +T+E
Sbjct: 1  ALMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVE 60

Query: 48 AVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 78
           +EGG+KK++EAKVW + W+  K+L EF+ +
Sbjct: 61 VIEGGKKKVYEAKVWVQAWLNSKKLHEFSPI 91

>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus} Length = 135

 Score = 89.0 bits (220), Expect = 8e-25
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 15/96 (15%)

Query: 1   MATVGGVREVEAT-ANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDIT 45
              +GG+ +      N  +  +LARFAV E+N K              +QVVSG ++ +T
Sbjct: 40  HPIMGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLT 99

Query: 46  LEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 81
           +E  + G+KKL+EAKVWE+ WM F++L+EF  +  +
Sbjct: 100 VEVNDAGKKKLYEAKVWEQVWMNFRQLQEFTYLGDA 135

>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2 Length = 102

 Score = 85.0 bits (210), Expect = 1e-23
 Identities = 50/98 (51%), Positives = 60/98 (61%), Gaps = 15/98 (15%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITL 46
              +GGV  V    N+  +V+LARFAV EHNKK              QQVV+GTLY  T+
Sbjct: 6   GPVLGGVEPVGN-ENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTI 64

Query: 47  EAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 84
           E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S ++
Sbjct: 65  EVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDASANA 102

>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A Length = 87

 Score = 79.5 bits (196), Expect = 1e-21
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 15/80 (18%)

Query: 14 ANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLEAVE-GGQKKLFE 58
           NN +   LARFA+ ++NKKQ              QVV+G +Y ITL A +  G+KK+++
Sbjct: 8  PNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYK 67

Query: 59 AKVWEKPWMQFKELKEFNTV 78
          AK+W K W  FK++ EF  V
Sbjct: 68 AKIWVKEWEDFKKVVEFKLV 87

>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata} Length = 115

 Score = 63.3 bits (153), Expect = 8e-15
 Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 35/108 (32%)

Query: 2   ATVGGVREVEATANNQEIVNLARFAVDEHNKKQ--------------QVVSGTLYDITLE 47
           +  GG    +        + LA FA     + +              QVV+G  Y +T+E
Sbjct: 2   SIPGGWTRQDP--TEARFLELAHFATSSQTEGREFYDTVVTVKEVETQVVAGMNYKLTIE 59

Query: 48  AVE-------------------GGQKKLFEAKVWEKPWMQFKELKEFN 76
                                   QK    A ++  PW   K +  + 
Sbjct: 60  ISPSVCKIGEVQYSAEQCVPKDAQQKSTCVAVIYHVPWQNQKSVTSYR 107

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A Length = 111

 Score = 53.2 bits (127), Expect = 5e-11
 Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 38/109 (34%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKKQ----------------QVVSGTLYDITLE 47
           +G    V+   N++ +    +FA+ E+N+                  Q+VSG  Y + +E
Sbjct: 3   LGAPVPVDE--NDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVE 60

Query: 48  AV--------------------EGGQKKLFEAKVWEKPWMQFKELKEFN 76
                                 E  +       V+  PW+   +L E  
Sbjct: 61  IGRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESK 109

>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A Length = 115

 Score = 53.1 bits (127), Expect = 7e-11
 Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 37/111 (33%)

Query: 1   MATVGGVREVEATANNQEIVNLARFAVDEHNKKQ-----------------QVVSGTLYD 43
           +A  GG RE     ++ E + +A +A    + +Q                 Q V+GT Y 
Sbjct: 3   LALRGGYRERSNQ-DDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYR 61

Query: 44  ITLEAVE------------------GGQKKLFEAKVWEKPWMQFKELKEFN 76
           +TL+  E                     ++     ++       K +  F 
Sbjct: 62  LTLKVAESTCELTSTYNKDTCQANANAAQRTCTTVIYR-NMQGEKSINSFE 111

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 1r4c_A Length = 120

 Score = 52.1 bits (124), Expect = 2e-10
 Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 38/109 (34%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKKQ----------------QVVSGTLYDITLE 47
           VGG  +       + +     FAV E+NK                  Q+V+G  Y + +E
Sbjct: 10  VGGPMDASV--EEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVE 67

Query: 48  AVE--------------------GGQKKLFEAKVWEKPWMQFKELKEFN 76
                                    +K     +++  PW     L +  
Sbjct: 68  LCRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKST 116

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens} Length = 131

 Score = 51.8 bits (123), Expect = 3e-10
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 39/110 (35%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKKQ----------------QVVSGTLYDITLE 47
            G  + +    N+  ++  AR++V++ N                   Q+V G  Y + +E
Sbjct: 17  PGFPKTI--KTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVE 74

Query: 48  AVE---------------------GGQKKLFEAKVWEKPWMQFKELKEFN 76
                                     Q     ++VW  PW+Q  E+    
Sbjct: 75  IGRTTCKKNQHLRLDDCDFQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLR 124

>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A Length = 122

 Score = 50.7 bits (120), Expect = 6e-10
 Identities = 16/110 (14%), Positives = 30/110 (27%), Gaps = 39/110 (35%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNKKQ-----------------QVVSGTLYDITL 46
            GG+   +   N++ +     FA+ E+NK                   Q+V G  Y   +
Sbjct: 11  AGGIHATDL--NDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNV 68

Query: 47  EAVEGGQKKLFE--------------------AKVWEKPWMQFKELKEFN 76
           +       K                        ++ E PW     +  + 
Sbjct: 69  KFGRTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYK 118

>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima} Length = 95

 Score = 42.9 bits (100), Expect = 3e-07
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 16/77 (20%)

Query: 15 NNQEIVNLARFAVDEHNKKQ---------QVVSG-----TLYDITLEAVEGGQK--KLFE 58
          N+  +  +A FA+ +H ++          Q++ G       Y++ L A     +  K + 
Sbjct: 15 NDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILSAKHSPHEFSKFYN 74

Query: 59 AKVWEKPWMQFKELKEF 75
            V EK      +L  F
Sbjct: 75 VVVLEKASDNSLKLVAF 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
3ima_B	91	Cysteine proteinase inhibitor; cystatin, tarocysta	99.97
1eqk_A	102	Oryzacystatin-I; alpha and beta proteins, cystatin	99.97
3ul5_A	139	Canecystatin-1; defense, hydrolase inhibitor; 2.30	99.97
2kxg_A	95	Aspartic protease inhibitor; sqapi, protein, hydro	99.96
2l4v_A	135	Cystatin; protease inhibitor, hydrolase inhibitor;	99.95
2w9q_A	87	Multicystatin; protease inhibitor, thiol protease	99.95
2o9u_X	97	Monellin chain B and monellin chain A; alternative	99.94
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	99.92
3l0r_A	115	Cystatin-2, OMC2; SOFT TICK, protease inhibitor, t	99.91
1roa_A	122	Cystatin D; inhibitor of cysteine pepidases, prote	99.9
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	99.9
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	99.89
3mwz_A	115	Sialostatin L2; antiparallel beta-sheet, hydrolase	99.89
2oct_A	98	Cystatin B; stefin, amyloid, domain-swapping, hand	99.83
1cyu_A	98	Cystatin A, stefin A; proteinase inhibitor (cystei	99.78
2bo9_B	222	Human latexin, MUM; metallocarboxypeptidase, X-RAY	85.08

>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0

Probab=99.97  E-value=1.4e-31  Score=165.20  Aligned_cols=77  Identities=55%  Similarity=0.945  Sum_probs=67.8

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEeccCC
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWM   67 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~pw~   67 (86)
                      +++|||+++.++++||+|+++|+||+.+||++              +|||||+||+|+|++++++..+.|+++||++||+
T Consensus         1 ~~~GG~~~~~~~~~d~~v~~~a~fav~~~n~~~n~~~~~~~Vv~a~~QVVaG~nY~l~v~~~~~~~~~~y~a~V~~~pW~   80 (91)
T 3ima_B            1 ALMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVIEGGKKKVYEAKVWVQAWL   80 (91)
T ss_dssp             CCBTCEEC------CHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEEEEEGGG
T ss_pred             CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCceEEEEEEEEEeeCC
Confidence            47899999965689999999999999999986              8999999999999999999999999999999999


Q ss_pred             CceeEEEEEec
Q 034707           68 QFKELKEFNTV   78 (86)
Q Consensus        68 n~~~L~sf~~~   78 (86)
                      |+++|+||+|+
T Consensus        81 ~~~~l~~F~~~   91 (91)
T 3ima_B           81 NSKKLHEFSPI   91 (91)
T ss_dssp             TEEEEEEEEC-
T ss_pred             CcEEEEEEEeC
Confidence            99999999985

>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2

Probab=99.97  E-value=6.1e-31  Score=164.96  Aligned_cols=81  Identities=62%  Similarity=0.989  Sum_probs=76.6

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEeccCC
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWM   67 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~pw~   67 (86)
                      +++|||+++. +++||+++++++||+.+||++              +|||||+||+|+|+++++++.+.|+++||++||+
T Consensus         7 ~~~GG~~~~~-~~~~~~v~~~a~~Av~~~n~~~n~~~~~~~Vv~a~~QVVaG~~Y~l~v~~~~~~~~~~c~~~V~~~PW~   85 (102)
T 1eqk_A            7 PVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWM   85 (102)
T ss_dssp             SCSSSSEEEC-CTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTTT
T ss_pred             CCCcccccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCcEEEEEEEEEeeCC
Confidence            4689999975 699999999999999999966              9999999999999999999999999999999999


Q ss_pred             CceeEEEEEecCCCCC
Q 034707           68 QFKELKEFNTVAQSHS   83 (86)
Q Consensus        68 n~~~L~sf~~~~~~~~   83 (86)
                      |+++|++|+|..++|+
T Consensus        86 ~~~~l~~f~c~~~~~~  101 (102)
T 1eqk_A           86 DFKELQEFKPVDASAN  101 (102)
T ss_dssp             TBCCEEEEECCCCCCC
T ss_pred             CceEEEEEEcCCCCCC
Confidence            9999999999999984

>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*

Probab=99.97  E-value=1.3e-30  Score=172.31  Aligned_cols=81  Identities=51%  Similarity=0.859  Sum_probs=64.8

Q ss_pred             Ccccccceec-cCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEec-CCceEEEEEEEEec
Q 034707            1 MATVGGVREV-EATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVE-GGQKKLFEAKVWEK   64 (86)
Q Consensus         1 ~~~~GG~~~i-~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~-~~~~~~y~a~Vw~~   64 (86)
                      |.++|||+++ .++++||+||++|+||+.+||++              +|||||+||+|+|++.+ ++..+.|+|+||++
T Consensus        43 ~~~~GG~~~i~~~~~ndpeVqela~fAV~e~Nkksn~~l~~~kVv~a~sQVVAG~nY~L~V~a~d~~g~~~~y~a~Vwek  122 (139)
T 3ul5_A           43 VGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYEAKVWEK  122 (139)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEECSSCCEEEEEEEEEEE
T ss_pred             CCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEEEEEEEEEecCEEEEEEEEEecCCCCeEEEEEEEEEe
Confidence            4679999999 34589999999999999999987              99999999999999999 88999999999999


Q ss_pred             cCCCceeEEEEEecCCC
Q 034707           65 PWMQFKELKEFNTVAQS   81 (86)
Q Consensus        65 pw~n~~~L~sf~~~~~~   81 (86)
                      ||+|+++|++|+|+.+|
T Consensus       123 PW~n~k~L~sF~p~~~~  139 (139)
T 3ul5_A          123 VWENFKQLQSFQPVGDA  139 (139)
T ss_dssp             TTTTEEEEEEEEECC--
T ss_pred             eCCCceEEEEEEEcCCC
Confidence            99999999999999875

>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}

Probab=99.96  E-value=1.5e-28  Score=153.43  Aligned_cols=75  Identities=24%  Similarity=0.438  Sum_probs=71.9

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc---------Cceeeee-----EEEEEEEEecC--CceEEEEEEEEecc
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK---------QQVVSGT-----LYDITLEAVEG--GQKKLFEAKVWEKP   65 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~---------~QVVaG~-----nY~l~v~~~~~--~~~~~y~a~Vw~~p   65 (86)
                      +++|||+++  |+||++|+++|+|||.+||++         .|||+|+     +|+|+|+++++  ++.+.|+|+||++|
T Consensus         4 ~~~Gg~~~i--~~nd~~v~e~a~fAv~e~N~~~l~~~~Vv~aQVVaG~~~~~~~Y~L~l~~~~~~~~~~~~y~a~Vw~kp   81 (95)
T 2kxg_A            4 PAIGEVIGI--SVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILSAKHSPHEFSKFYNVVVLEKA   81 (95)
T ss_dssp             CSSCCCCCC--CTTCHHHHHHHHHHHHHCCTTCCEEEEEEEEEEECSSCSSCCEEEEEEEEESCTTSCCEEEEEEEEEET
T ss_pred             CCCCcceEC--CCCCHHHHHHHHHHHHHHHhhCcEEEEEEEEeEecCccccCccEEEEEEEecCCCCCceEEEEEEEEcc
Confidence            578999999  899999999999999999997         7999999     99999999998  88999999999999


Q ss_pred             CCCceeEEEEEec
Q 034707           66 WMQFKELKEFNTV   78 (86)
Q Consensus        66 w~n~~~L~sf~~~   78 (86)
                      |+|+++|+||+|+
T Consensus        82 W~n~~~L~sF~~~   94 (95)
T 2kxg_A           82 SDNSLKLVAFVPL   94 (95)
T ss_dssp             TTTEEEEEEEEEC
T ss_pred             CCCcEEEEEeEec
Confidence            9999999999986

>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus}

Probab=99.95  E-value=2.2e-28  Score=160.84  Aligned_cols=80  Identities=44%  Similarity=0.775  Sum_probs=75.0

Q ss_pred             cccccceecc-CCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEeccC
Q 034707            2 ATVGGVREVE-ATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPW   66 (86)
Q Consensus         2 ~~~GG~~~i~-~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~pw   66 (86)
                      +++|||++++ ++++|++++++++||+.+||++              +|||+|+||+|+|+++++++.+.|+++||++||
T Consensus        41 ~~~GG~~~i~~~~~nd~evqe~a~fAv~e~N~~sn~~~~f~kVv~a~~QVVAG~nY~l~vev~~~~~~~~c~a~Vw~kPW  120 (135)
T 2l4v_A           41 PIMGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEVNDAGKKKLYEAKVWEQVW  120 (135)
T ss_dssp             CCCCCSSCCCCTTTTSHHHHHHHHHHHHHHHHHTSCCCEEEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEEECSS
T ss_pred             CCCCccCcCCCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEecCEEEEEEEEEecCCceEEEEEEEEEecC
Confidence            4689999994 3489999999999999999986              999999999999999999999999999999999


Q ss_pred             CCceeEEEEEecCCC
Q 034707           67 MQFKELKEFNTVAQS   81 (86)
Q Consensus        67 ~n~~~L~sf~~~~~~   81 (86)
                      +|+++|++|+|+.++
T Consensus       121 ~n~~~L~~f~~~~~~  135 (135)
T 2l4v_A          121 MNFRQLQEFTYLGDA  135 (135)
T ss_dssp             SCCEEEEEEEECSCC
T ss_pred             CCceEEEEEEecCCC
Confidence            999999999999875

>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A

Probab=99.95  E-value=7.6e-28  Score=146.82  Aligned_cols=72  Identities=47%  Similarity=0.853  Sum_probs=68.3

Q ss_pred             cceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEec-CCceEEEEEEEEeccCCCce
Q 034707            6 GVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFK   70 (86)
Q Consensus         6 G~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~-~~~~~~y~a~Vw~~pw~n~~   70 (86)
                      ||+++. |++||+++++|+||+.+||++              +|||||+||+|++++++ +++...|+++||++||+|++
T Consensus         1 G~~~~~-~~~d~~v~~~~~fAv~~~n~~~n~~~~~~~vv~a~~QVVaG~~Y~l~v~~~~~~~~~~~c~~~V~~~PW~~~~   79 (87)
T 2w9q_A            1 GIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFK   79 (87)
T ss_dssp             CCEECS-STTSHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTTEEEEEEEEEEEEGGGTEE
T ss_pred             CcccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCCeEEEEEEEEEeeCCCce
Confidence            799997 799999999999999999987              89999999999999998 57889999999999999999


Q ss_pred             eEEEEEec
Q 034707           71 ELKEFNTV   78 (86)
Q Consensus        71 ~L~sf~~~   78 (86)
                      +|++|+|+
T Consensus        80 ~l~~f~~~   87 (87)
T 2w9q_A           80 KVVEFKLV   87 (87)
T ss_dssp             EEEEEEEC
T ss_pred             EEEeeccC
Confidence            99999985

>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*

Probab=99.94  E-value=1.2e-27  Score=149.74  Aligned_cols=71  Identities=28%  Similarity=0.363  Sum_probs=64.1

Q ss_pred             cccceeccCCCCCHHHHHHHHHHHHHhccc--------------------------CceeeeeEEEEEEEEecCCceEEE
Q 034707            4 VGGVREVEATANNQEIVNLARFAVDEHNKK--------------------------QQVVSGTLYDITLEAVEGGQKKLF   57 (86)
Q Consensus         4 ~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------------------~QVVaG~nY~l~v~~~~~~~~~~y   57 (86)
                      .|||+++  |+ ||+||+||+|||.+||++                          +| |||+||+|+|++.++    .|
T Consensus         1 ~Ggw~~i--dv-~~~iqela~FAV~e~nk~~~~~~L~f~~Vv~~~~~~~~~~~~~~~Q-VaG~nY~Ltlea~d~----~y   72 (97)
T 2o9u_X            1 MGEWEII--DI-GPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFRE-IKGYEYQLYVYASDK----LF   72 (97)
T ss_dssp             -CCCEEE--CC-SHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCS-EEEEEEEEEEEETTE----EC
T ss_pred             CCCceEC--CC-CHHHHHHHHHHHHHHhccccCCCcEEEEEEEcccccccccchhhee-eccEEEEEEEEEeCC----ce
Confidence            4999999  78 999999999999999973                          68 999999999999886    99


Q ss_pred             EEEEEeccCCCceeEEEEEecCCCC
Q 034707           58 EAKVWEKPWMQFKELKEFNTVAQSH   82 (86)
Q Consensus        58 ~a~Vw~~pw~n~~~L~sf~~~~~~~   82 (86)
                      +|+||++||+|+++|+||++..++|
T Consensus        73 eA~V~ekpw~n~k~L~sF~~~~~~~   97 (97)
T 2o9u_X           73 RADISEDYKTRGRKLLRFNGPVPPP   97 (97)
T ss_dssp             -CEEEEETTTCCEEEEECCCCCCCC
T ss_pred             EEEEEEecCCCcEEeeEccCCCCCC
Confidence            9999999999999999999877665

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A

Probab=99.92  E-value=5e-25  Score=138.67  Aligned_cols=74  Identities=24%  Similarity=0.357  Sum_probs=68.9

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC--------------
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG--------------   51 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~--------------   51 (86)
                      +++|||+++  +++||+|+++++||+.+||++                +|||+|++|+|+++++++              
T Consensus         1 ~~~Gg~~~~--~~~d~~v~~~~~~av~~~N~~s~~~~~~~l~~v~~a~~QvVaG~~y~l~v~v~~t~C~k~~~~~~~C~~   78 (111)
T 1yvb_I            1 RLLGAPVPV--DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEF   78 (111)
T ss_dssp             CCTTCEECC--CTTCHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCCEEEESSSEEEEEEEEEEEBSSCSSSSCSSCCCB
T ss_pred             CCCCCceEC--CCCCHHHHHHHHHHHHHHHHhCCCcceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCC
Confidence            368999999  799999999999999999976                899999999999999886              


Q ss_pred             ------CceEEEEEEEEeccCCCceeEEEEEe
Q 034707           52 ------GQKKLFEAKVWEKPWMQFKELKEFNT   77 (86)
Q Consensus        52 ------~~~~~y~a~Vw~~pw~n~~~L~sf~~   77 (86)
                            ++...|+++||++||++.++|++|+|
T Consensus        79 ~~~~~~~~~~~C~~~V~~~pW~~~~~l~~~~C  110 (111)
T 1yvb_I           79 HDEPEMAKYTTCTFVVYSIPWLNQIKLLESKC  110 (111)
T ss_dssp             CSSTTTSCCEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred             CCCcccccccEEEEEEEecCCCCccEeecccc
Confidence                  35789999999999999999999998

>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata}

Probab=99.91  E-value=4.4e-24  Score=136.49  Aligned_cols=74  Identities=26%  Similarity=0.447  Sum_probs=66.5

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEec---------------
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVE---------------   50 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~---------------   50 (86)
                      +++|||+++  +++||+|+++|+||+.  |++                +|||||+||+|+|++++               
T Consensus         2 ~~~GG~~~i--~~~d~~v~~~a~~Av~--N~~s~~~~~~~~~kV~~a~~QVVaG~~Y~i~v~v~~t~C~K~~~~~~~~~C   77 (115)
T 3l0r_A            2 SIPGGWTRQ--DPTEARFLELAHFATS--SQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEISPSVCKIGEVQYSAEQC   77 (115)
T ss_dssp             -CCCSCEEE--CTTCHHHHHHHHHHHT--TCCTTCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEEBTTBCCCTTTC
T ss_pred             CCcccceeC--CCCCHHHHHHHHHHHh--ccccCCCcceEEEEEEEEEEEEEeeEEEEEEEEEecccccccccccccccC
Confidence            578999999  6899999999999998  665                89999999999999975               


Q ss_pred             ----CCceEEEEEEEEeccCCCceeEEEEEecC
Q 034707           51 ----GGQKKLFEAKVWEKPWMQFKELKEFNTVA   79 (86)
Q Consensus        51 ----~~~~~~y~a~Vw~~pw~n~~~L~sf~~~~   79 (86)
                          +++...|+++||++||+++++|++|.+-.
T Consensus        78 ~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~~~~  110 (115)
T 3l0r_A           78 VPKDAQQKSTCVAVIYHVPWQNQKSVTSYRCEH  110 (115)
T ss_dssp             CBSCTTSCEEEEEEEEEEGGGTEEEEEEEEECC
T ss_pred             cccCCCceeEEEEEEEEecCCCeeEEEEEEccc
Confidence                25788999999999999999999999854

>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A

Probab=99.90  E-value=8.3e-24  Score=135.51  Aligned_cols=74  Identities=22%  Similarity=0.387  Sum_probs=66.6

Q ss_pred             ccccceeccCCCCCHHHHHHHHHHHHHhccc-----------------CceeeeeEEEEEEEEecCC-------------
Q 034707            3 TVGGVREVEATANNQEIVNLARFAVDEHNKK-----------------QQVVSGTLYDITLEAVEGG-------------   52 (86)
Q Consensus         3 ~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~-----------------~QVVaG~nY~l~v~~~~~~-------------   52 (86)
                      ++|||+++  +++||+|+++++||+.+||++                 +|||+|+||+|+|++.++.             
T Consensus        10 ~~Gg~~~~--~~~d~~v~~~a~~Av~~~N~~~s~~~~~~~l~~v~~a~~QVVaG~~Y~l~v~v~~t~C~k~~~~~~~C~~   87 (122)
T 1roa_A           10 LAGGIHAT--DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPF   87 (122)
T ss_dssp             --CCEEEE--CTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSCCB
T ss_pred             CCCCCeEC--CCCCHHHHHHHHHHHHHHHhcccCCCceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCC
Confidence            68999999  799999999999999999853                 8999999999999998852             


Q ss_pred             -------ceEEEEEEEEeccCCCceeEEEEEec
Q 034707           53 -------QKKLFEAKVWEKPWMQFKELKEFNTV   78 (86)
Q Consensus        53 -------~~~~y~a~Vw~~pw~n~~~L~sf~~~   78 (86)
                             +...|+++||++||+++++|++|+|.
T Consensus        88 ~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~  120 (122)
T 1roa_A           88 NDQPKLKEEEFCSFQINEVPWEDKISILNYKCR  120 (122)
T ss_dssp             CCSTTCCCCEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred             CCCcccccceEEEEEEEecccCCccEECccccc
Confidence                   47899999999999999999999984

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens}

Probab=99.90  E-value=1.7e-23  Score=136.30  Aligned_cols=76  Identities=24%  Similarity=0.400  Sum_probs=68.2

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC--------------
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG--------------   51 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~--------------   51 (86)
                      +++|||+++  +++||+|+++++||+.+||++                +|||+|++|+|+|+++++              
T Consensus        15 ~~~Gg~~~~--~~~d~ev~e~a~~Av~~~N~~sn~~~~~~l~~V~~a~~QVVaG~~Y~l~v~v~~t~C~K~~~~~~~~C~   92 (131)
T 2ch9_A           15 VKPGFPKTI--KTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVEIGRTTCKKNQHLRLDDCD   92 (131)
T ss_dssp             SCCCCCEEC--CTTCHHHHHHHHHHHHHHHHHSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCGGGCC
T ss_pred             cCCCCCeeC--CCCCHHHHHHHHHHHHHHHHhCCCCcceEEEEEEEeeeEecCCeEEEEEEEEEcccccCCCCCccccCC
Confidence            578999999  799999999999999999976                999999999999999863              


Q ss_pred             ----C---ceEEEEEEEEeccCCCceeEEEEEecC
Q 034707           52 ----G---QKKLFEAKVWEKPWMQFKELKEFNTVA   79 (86)
Q Consensus        52 ----~---~~~~y~a~Vw~~pw~n~~~L~sf~~~~   79 (86)
                          +   +...|+++||++||+++++|++|.+-.
T Consensus        93 ~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~f~~~~  127 (131)
T 2ch9_A           93 FQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLRCHH  127 (131)
T ss_dssp             BCCSTTTCCEEEEEEEEEEEGGGTEEEEEEEEEEC
T ss_pred             cccCcccccccEEEEEEEEecCCCeeEEEEEeccc
Confidence                1   235899999999999999999998854

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} SCOP: d.17.1.2 PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 3sva_A 3s67_A 1r4c_A

Probab=99.89  E-value=1.4e-23  Score=134.40  Aligned_cols=75  Identities=24%  Similarity=0.398  Sum_probs=66.2

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC--------------
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG--------------   51 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~--------------   51 (86)
                      +++|||+++  +++||+|+++++||+.+||++                +|||+|++|+|+++++++              
T Consensus         8 ~~~Gg~~~~--~~~d~~v~~~a~~av~~~N~~sn~~~~~~~~~v~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~C~~   85 (120)
T 3gax_A            8 RLVGGPMDA--SVEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVELCRTTCTKTQPNLDNCPF   85 (120)
T ss_dssp             ----CCEEE--CTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEESCC--CCCCCB
T ss_pred             ccCCCCEeC--CCCCHHHHHHHHHHHHHHHhccCCcceeeEEEEEEEEEEEecCeEEEEEEEEEeeeccCCCCCcccCCC
Confidence            468999999  799999999999999999987                899999999999999873              


Q ss_pred             ------CceEEEEEEEEeccCCCceeEEEEEec
Q 034707           52 ------GQKKLFEAKVWEKPWMQFKELKEFNTV   78 (86)
Q Consensus        52 ------~~~~~y~a~Vw~~pw~n~~~L~sf~~~   78 (86)
                            ++...|.++||++||+++++|++++|.
T Consensus        86 ~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~  118 (120)
T 3gax_A           86 HDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQ  118 (120)
T ss_dssp             CSSHHHHCCEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred             cCCccccCceEEEEEEEecCCCCeEEeccceec
Confidence                  357899999999999999999999884

>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A

Probab=99.89  E-value=1e-22  Score=129.43  Aligned_cols=75  Identities=24%  Similarity=0.420  Sum_probs=67.3

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc-----------------CceeeeeEEEEEEEEec--------------
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK-----------------QQVVSGTLYDITLEAVE--------------   50 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~-----------------~QVVaG~nY~l~v~~~~--------------   50 (86)
                      .++|||++++ +.+||+|+++++||+.+||++                 +|||+|+||+|++++++              
T Consensus         4 ~~~Gg~~~~~-~~~~~~v~~~~~~av~~~N~~sn~~~~~~~~~~V~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~~C   82 (115)
T 3mwz_A            4 ALRGGYRERS-NQDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYRLTLKVAESTCELTSTYNKDTC   82 (115)
T ss_dssp             CCSSCCEEEC-TTSCTHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCTTTC
T ss_pred             ccCCcceECC-CCCCHHHHHHHHHHHHHHHhhcCCcccceeeeeeeEEEeeccCCEEEEEEEEEEeccccCCCcCCcccC
Confidence            4689999994 239999999999999999876                 89999999999999953              


Q ss_pred             ----CCceEEEEEEEEeccCCCceeEEEEEec
Q 034707           51 ----GGQKKLFEAKVWEKPWMQFKELKEFNTV   78 (86)
Q Consensus        51 ----~~~~~~y~a~Vw~~pw~n~~~L~sf~~~   78 (86)
                          +++...|+++||++| +|+++|++|+|.
T Consensus        83 ~~~~~~~~~~C~~~V~~~P-~~~~~l~~~~C~  113 (115)
T 3mwz_A           83 QANANAAQRTCTTVIYRNM-QGEKSINSFECA  113 (115)
T ss_dssp             CCCTTSCEEEEEEEEEECT-TSCEEEEEEEEC
T ss_pred             CCCCCCCeeEEEEEEEECC-CCEEEEcccccc
Confidence                467899999999999 999999999985

>2oct_A Cystatin B; stefin, amyloid, domain-swapping, hand shaking, PR isomerization, protein binding; 1.40A {Homo sapiens} PDB: 1stf_I*

Probab=99.83  E-value=1.9e-20  Score=116.97  Aligned_cols=71  Identities=21%  Similarity=0.289  Sum_probs=63.2

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEec-c-
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEK-P-   65 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~-p-   65 (86)
                      ||+|||+++  +++||++|++++||+.++|++              +|||||+||+|+|+++++   ..++++||+. | 
T Consensus         1 mm~GG~~~~--~~~~~evq~i~~~a~~~~n~~~~~~~~~~~vv~~~tQVVAG~NY~ikv~v~~~---~~~h~~vy~~lp~   75 (98)
T 2oct_A            1 MMSGAPSAT--QPATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDE---DFVHLRVFQSLPH   75 (98)
T ss_dssp             -CCSSCCCC--EECCHHHHHHHHHHHHHHHHHHTSCCSCCEEEEEEEEEEEEEEEEEEEECSTT---CEEEEEEEEESST
T ss_pred             CCcccCcCC--CCCCHHHHHHHHHHHHHHHhhcCCccceeEEEEEEEEEeCCEEEEEEEEECCC---cEEEEEEEecCCC
Confidence            379999999  579999999999999998765              999999999999999887   4789999997 4 


Q ss_pred             CCCceeEEEEEe
Q 034707           66 WMQFKELKEFNT   77 (86)
Q Consensus        66 w~n~~~L~sf~~   77 (86)
                      |.+..+|++|..
T Consensus        76 ~~~~~~l~~~q~   87 (98)
T 2oct_A           76 ENKSLTLSNYQT   87 (98)
T ss_dssp             TCCCEEEEEEEE
T ss_pred             CCCceEEEEEec
Confidence            888999999965

>1cyu_A Cystatin A, stefin A; proteinase inhibitor (cysteine); NMR {Homo sapiens} SCOP: d.17.1.2 PDB: 1cyv_A 1gd3_A 1dvc_A 1dvd_A 1n9j_A 1nb3_I* 1nb5_I* 3k9m_C 3kfq_C 3kse_D* 1gd4_A

Probab=99.78  E-value=6.5e-20  Score=113.84  Aligned_cols=71  Identities=25%  Similarity=0.312  Sum_probs=64.3

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEecc--
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEKP--   65 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~p--   65 (86)
                      |++|||+++  +++||+++++++||+.++|++              +|||||+||+|+++++++   ..++++||+..  
T Consensus         1 ~~~GG~~~~--~~~d~ev~~~a~~av~~~n~~~n~~~~~~~vv~a~~QVVaG~nY~l~v~~~~~---~c~~~~V~~~l~~   75 (98)
T 1cyu_A            1 MIPGGLSEA--KPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDN---KYLHLKVFKSLPG   75 (98)
T ss_dssp             CCCSSCSSE--EESCTTHHHHHHHTCTTTTTSSCCSSSCEEEEEEEEECSSSCEEEEEEEECSS---CBCEEEEECCCSS
T ss_pred             CCCcccccC--CCCCHHHHHHHHHHHHHHHhhcCCCcceEEEEEEEEEEecceEEEEEEEEcCC---cEEEEEEecCCCC
Confidence            378999999  689999999999999999987              999999999999999987   36799999974  


Q ss_pred             CCCceeEEEEEe
Q 034707           66 WMQFKELKEFNT   77 (86)
Q Consensus        66 w~n~~~L~sf~~   77 (86)
                      |.+.++|++|..
T Consensus        76 ~~~~~~l~~~q~   87 (98)
T 1cyu_A           76 QNEDLVLTGYQV   87 (98)
T ss_dssp             SCCCCEEEEEEC
T ss_pred             CCCCeEEEEEec
Confidence            788999999975

>2bo9_B Human latexin, MUM; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: d.17.1.5 d.17.1.5 PDB: 1wnh_A

Probab=85.08  E-value=4.7  Score=27.97  Aligned_cols=65  Identities=20%  Similarity=0.098  Sum_probs=43.9

Q ss_pred             CCCCHHHHHHHHHHHHHhccc----------Cceee---------eeEEEEEEEEec---CCceEEEEEEEEecc-CCCc
Q 034707           13 TANNQEIVNLARFAVDEHNKK----------QQVVS---------GTLYDITLEAVE---GGQKKLFEAKVWEKP-WMQF   69 (86)
Q Consensus        13 ~~~d~~Vq~la~~Av~~~n~~----------~QVVa---------G~nY~l~v~~~~---~~~~~~y~a~Vw~~p-w~n~   69 (86)
                      ++.--..+.+|+-|+.=+|-.          .||..         |-+|.|++.+.+   .+....|.|+|+=.+ -.+.
T Consensus         4 ~psh~~a~rAA~vA~hy~N~~~gSP~~l~~L~~V~~a~a~~ip~~G~Ky~l~Fs~e~~~~~~~~~~CsA~Vlf~~~~qk~   83 (222)
T 2bo9_B            4 PPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYPSTGQET   83 (222)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEECTTCCC
T ss_pred             CCcchHHHHHHHHHHHHhhcccCCCceeeehhhhhhhhhhhccCCCcEEEEEEEeeeeecCCceeEEEEEEEEccCCCCC
Confidence            455555677888888777766          33332         889999999988   367899999998753 2233


Q ss_pred             eeEEEEEe
Q 034707           70 KELKEFNT   77 (86)
Q Consensus        70 ~~L~sf~~   77 (86)
                      .--..|.|
T Consensus        84 ~P~Vn~tc   91 (222)
T 2bo9_B           84 APEVNFTF   91 (222)
T ss_dssp             CCEEEEEE
T ss_pred             CCceEEEE
Confidence            33444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1eqka_	102	d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza	1e-21
d1roaa_	111	d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [Ta	5e-13
d1r4ca_	110	d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [Ta	2e-10
d1cewi_	108	d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [T	2e-10

>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]} Length = 102

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Phytocystatin
species: Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]

 Score = 79.2 bits (195), Expect = 1e-21
 Identities = 50/95 (52%), Positives = 60/95 (63%), Gaps = 15/95 (15%)

Query: 4   VGGVREVEATANNQEIVNLARFAVDEHNK--------------KQQVVSGTLYDITLEAV 49
           +GGV  V    N+  +V+LARFAV EHNK              KQQVV+GTLY  T+E  
Sbjct: 9   LGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVK 67

Query: 50  EGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 84
           EG  KKL+EAKVWEKPWM FKEL+EF  V  S ++
Sbjct: 68  EGDAKKLYEAKVWEKPWMDFKELQEFKPVDASANA 102

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 5e-13
 Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 39/109 (35%)

Query: 5   GGVREVEATANNQEIVNLARFAVDEHNKKQ-----------------QVVSGTLYDITLE 47
           GG+   +   N++ +     FA+ E+NK                   Q+V G  Y   ++
Sbjct: 1   GGIHATDL--NDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVK 58

Query: 48  AVEGGQKKLFE--------------------AKVWEKPWMQFKELKEFN 76
                  K                        ++ E PW     +  + 
Sbjct: 59  FGRTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYK 107

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 2e-10
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 38/108 (35%)

Query: 5   GGVREVEATANNQEIVNLARFAVDEHNK----------------KQQVVSGTLYDITLEA 48
           GG  +   +   + +     FAV E+NK                ++Q+V+G  Y + +E 
Sbjct: 1   GGPMDA--SVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVEL 58

Query: 49  VEGGQKKLFE--------------------AKVWEKPWMQFKELKEFN 76
                 K                        +++  PW     L +  
Sbjct: 59  GRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKST 106

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 108

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.4 bits (120), Expect = 2e-10
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 36/103 (34%)

Query: 10  VEATANNQEIVNLARFAVDEHNK----------------KQQVVSGTLYDITLEAVEGGQ 53
           V    N++ +    +FA+ E+N+                K+Q+VSG  Y + +E      
Sbjct: 4   VPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTC 63

Query: 54  KKLFE--------------------AKVWEKPWMQFKELKEFN 76
            K                         V+  PW+   +L E  
Sbjct: 64  PKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESK 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1eqka_	102	Phytocystatin {Japanese rice (Oryza sativa), subsp	99.97
d1roaa_	111	Cystatin D {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1r4ca_	110	Cystatin C {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1cewi_	108	Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}	99.88
d1stfi_	98	Cystatin B (stefin B) {Human (Homo sapiens) [TaxId	99.61
d1nb5i_	98	Cystatin A (stefin A) {Human (Homo sapiens) [TaxId	99.58
d1kwia_	98	Cathelicidin motif of protegrin-3 {Pig (Sus scrofa	99.1
d2o9ux1	96	Monellin, B & A chains together {Serendipity berry	95.56
d2bo9b1	98	Latexin {Human (Homo sapiens) [TaxId: 9606]}	89.98

>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Phytocystatin
species: Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]

Probab=99.97  E-value=1.4e-31  Score=167.04  Aligned_cols=81  Identities=62%  Similarity=0.989  Sum_probs=77.8

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHhccc--------------CceeeeeEEEEEEEEecCCceEEEEEEEEeccCC
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEHNKK--------------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWM   67 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~n~~--------------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~pw~   67 (86)
                      +++|||+|+. |++||+++++++||+.+||++              +|||+|+||+|+|++.+++..+.|+++||++||+
T Consensus         7 ~l~GG~~~i~-d~nd~~v~e~a~~Av~~~N~~~~~~~~~vkV~~a~~QVVaG~~Y~i~v~~~~~~~~k~c~~~Vw~~pW~   85 (102)
T d1eqka_           7 PVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWM   85 (102)
T ss_dssp             SCSSSSEEEC-CTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTTT
T ss_pred             cccCCcccCC-CCCCHHHHHHHHHHHHHHhhcCCCceEEEEEEEEeeeeccceeEEEEEEEccCCccEEEEEEEEEeeCC
Confidence            5789999987 899999999999999999998              8999999999999999999999999999999999


Q ss_pred             CceeEEEEEecCCCCC
Q 034707           68 QFKELKEFNTVAQSHS   83 (86)
Q Consensus        68 n~~~L~sf~~~~~~~~   83 (86)
                      ++++|++|+|+.+++|
T Consensus        86 ~~~~l~~f~~~~~~~~  101 (102)
T d1eqka_          86 DFKELQEFKPVDASAN  101 (102)
T ss_dssp             TBCCEEEEECCCCCCC
T ss_pred             CccEEEEEEEcCCCCC
Confidence            9999999999999976

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.5e-24  Score=132.52  Aligned_cols=72  Identities=22%  Similarity=0.404  Sum_probs=66.1

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc-----------------CceeeeeEEEEEEEEecC----------------
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK-----------------QQVVSGTLYDITLEAVEG----------------   51 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~-----------------~QVVaG~nY~l~v~~~~~----------------   51 (86)
                      |||.++  |++||+|+++++||+.+||++                 +|||+|++|+|+++++++                
T Consensus         1 GG~~~~--~~~d~~v~~~~~~Av~~~N~~sn~~~~~~~l~~V~~a~~QVVaG~~Y~l~~~i~~T~C~K~~~~~~~c~~~~   78 (111)
T d1roaa_           1 GGIHAT--DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFND   78 (111)
T ss_dssp             CCEEEE--CTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSCCBCC
T ss_pred             CCCccC--CCCCHHHHHHHHHHHHHHHHhcCCccceeEEEEEEEEEEEEecCcEEEEEEEEEeccccccccccccccccc
Confidence            999999  899999999999999999876                 999999999999998652                


Q ss_pred             ----CceEEEEEEEEeccCCCceeEEEEEec
Q 034707           52 ----GQKKLFEAKVWEKPWMQFKELKEFNTV   78 (86)
Q Consensus        52 ----~~~~~y~a~Vw~~pw~n~~~L~sf~~~   78 (86)
                          +++..|++.||++||+++.+|++++|-
T Consensus        79 ~~~~~~~~~C~~~V~~~PW~~~~~v~~~~C~  109 (111)
T d1roaa_          79 QPKLKEEEFCSFQINEVPWEDKISILNYKCR  109 (111)
T ss_dssp             STTCCCCEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred             CccccceEEEEEEEEEcccCCceEEeecccc
Confidence                457899999999999999999999873

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.9e-23  Score=127.79  Aligned_cols=72  Identities=24%  Similarity=0.392  Sum_probs=66.5

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC-----------------
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG-----------------   51 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~-----------------   51 (86)
                      ||+.++  ++|||+|+++++||+.+||++                +|||+|++|+|++++..+                 
T Consensus         1 Gg~~~~--~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~kV~~a~~QvVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~   78 (110)
T d1r4ca_           1 GGPMDA--SVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQ   78 (110)
T ss_dssp             CCCEEC--CTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETTSSCGGGCCBCCS
T ss_pred             CCCccC--CCCCHHHHHHHHHHHHHHHhhCCccceeEEEEEEEEEEEeccCCEEEEEEEEeecccccCccccccCccccC
Confidence            899999  899999999999999999987                899999999999999642                 


Q ss_pred             ---CceEEEEEEEEeccCCCceeEEEEEec
Q 034707           52 ---GQKKLFEAKVWEKPWMQFKELKEFNTV   78 (86)
Q Consensus        52 ---~~~~~y~a~Vw~~pw~n~~~L~sf~~~   78 (86)
                         ++...|++.||++||+++.+|++++|-
T Consensus        79 ~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~  108 (110)
T d1r4ca_          79 PHLKRKAFCSFQIYAVPWQGTMTLSKSTCQ  108 (110)
T ss_dssp             TTTCCEEEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred             ccccceEEEEEEEEEeccCCceEEeeeecc
Confidence               457899999999999999999999874

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.88  E-value=9.5e-23  Score=126.79  Aligned_cols=71  Identities=25%  Similarity=0.373  Sum_probs=65.9

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc----------------CceeeeeEEEEEEEEecC-----------------
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK----------------QQVVSGTLYDITLEAVEG-----------------   51 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~----------------~QVVaG~nY~l~v~~~~~-----------------   51 (86)
                      ||+.++  +++||+|+++++||+.+||++                +|||+|++|+|+++++.+                 
T Consensus         1 Gg~~~~--~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~~V~~a~~QVVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~   78 (108)
T d1cewi_           1 GAPVPV--DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDE   78 (108)
T ss_dssp             CCCEEC--CTTCHHHHHHHHHHTHHHHTTSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTCTTHHHHHHHHC
T ss_pred             CCCccC--CCCCHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEEeecCcEEEEEEEEEecccccccccccccccccC
Confidence            899999  899999999999999999999                999999999999999641                 


Q ss_pred             ---CceEEEEEEEEeccCCCceeEEEEEe
Q 034707           52 ---GQKKLFEAKVWEKPWMQFKELKEFNT   77 (86)
Q Consensus        52 ---~~~~~y~a~Vw~~pw~n~~~L~sf~~   77 (86)
                         ++...|+++||++||+++.+|++++|
T Consensus        79 ~~~~~~~~C~~~V~~~pW~~~~~v~~~~C  107 (108)
T d1cewi_          79 PEMAKYTTCTFVVYSIPWLNQIKLLESKC  107 (108)
T ss_dssp             SSCSCEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred             cccCceEEEEEEEEEeccCCceEeeeccc
Confidence               45789999999999999999999886

>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin B (stefin B)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=5.2e-16  Score=95.58  Aligned_cols=71  Identities=24%  Similarity=0.323  Sum_probs=59.9

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHHHHh----ccc----------CceeeeeEEEEEEEEecCCceEEEEEEEEec-cC
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAVDEH----NKK----------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEK-PW   66 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av~~~----n~~----------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~-pw   66 (86)
                      ||+|||++.  .+.+|++|+++.....+.    |++          +|||||+||+++|+++++   ...+++||.. |.
T Consensus         1 mm~GG~s~~--~~at~Eiq~i~d~Vk~~~e~k~~~k~~~f~av~yktQvVaG~NYfIKV~vg~~---~~~HlrV~~~Lp~   75 (98)
T d1stfi_           1 MMSGAPSAT--QPATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDE---DFVHLRVFQSLPH   75 (98)
T ss_dssp             CCBSCCCCC--EECCHHHHHHHHTTHHHHHHHHTCCCSCCEEEEEEEEESSEEEEEEEEECSSS---CEEEEEEEEECGG
T ss_pred             CcCCCCCCC--CCCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEEEEEEcceeEEEEEEeCCC---cEEEEEEeccCCC
Confidence            578999998  589999999999855444    544          999999999999999988   6799999997 77


Q ss_pred             CCc-eeEEEEEe
Q 034707           67 MQF-KELKEFNT   77 (86)
Q Consensus        67 ~n~-~~L~sf~~   77 (86)
                      .+. .+|+++..
T Consensus        76 ~~~~l~L~~~q~   87 (98)
T d1stfi_          76 ENKPLTLSNYQT   87 (98)
T ss_dssp             GCCCCEEEEEEE
T ss_pred             CCCceEEEEEec
Confidence            764 79999854

>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin A (stefin A)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.9e-15  Score=92.14  Aligned_cols=71  Identities=27%  Similarity=0.371  Sum_probs=59.7

Q ss_pred             cccccceeccCCCCCHHHHHHHHHHH----HHhccc----------CceeeeeEEEEEEEEecCCceEEEEEEEEec-cC
Q 034707            2 ATVGGVREVEATANNQEIVNLARFAV----DEHNKK----------QQVVSGTLYDITLEAVEGGQKKLFEAKVWEK-PW   66 (86)
Q Consensus         2 ~~~GG~~~i~~~~~d~~Vq~la~~Av----~~~n~~----------~QVVaG~nY~l~v~~~~~~~~~~y~a~Vw~~-pw   66 (86)
                      ||+|||++.  .+.+++||++|...-    ++.|+.          +|||||+||+++|.++++   ...+++||.. |.
T Consensus         1 mm~GG~s~~--~~at~Eiq~I~d~Vk~~le~k~g~~~~~F~av~yktQvVAGtNYfIKV~vG~~---~~vHlrVf~~Lp~   75 (98)
T d1nb5i_           1 MIPGGLSEA--KPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDN---KYMHLKVFKSLPG   75 (98)
T ss_dssp             CCTTSCCCC--EECCHHHHHHHHHHHHHHHHHHCCCCSCCEEEEEEEEESSEEEEEEEEECSSS---CEEEEEEEEECTT
T ss_pred             CccCCCCCC--CCCCHHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEcceeEEEEEEeCCC---cEEEEEEeccCCC
Confidence            679999998  599999999998743    345555          899999999999999887   6899999997 77


Q ss_pred             CC-ceeEEEEEe
Q 034707           67 MQ-FKELKEFNT   77 (86)
Q Consensus        67 ~n-~~~L~sf~~   77 (86)
                      .+ ..+|+++..
T Consensus        76 ~~~~l~L~~~q~   87 (98)
T d1nb5i_          76 QNEDLVLTGYQV   87 (98)
T ss_dssp             SCCCCEEEEEEE
T ss_pred             CCCccEEEEEEc
Confidence            65 489999854

>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cathelicidin motif
domain: Cathelicidin motif of protegrin-3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.10  E-value=4.1e-11  Score=72.37  Aligned_cols=56  Identities=18%  Similarity=0.100  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHhccc----------------Ccee-eeeEEEEEEEEecC------------------CceEEEEEEEE
Q 034707           18 EIVNLARFAVDEHNKK----------------QQVV-SGTLYDITLEAVEG------------------GQKKLFEAKVW   62 (86)
Q Consensus        18 ~Vq~la~~Av~~~n~~----------------~QVV-aG~nY~l~v~~~~~------------------~~~~~y~a~Vw   62 (86)
                      .+++++.+||.+||++                .|+| +|++|+|++.+.++                  +..+.|.+.||
T Consensus         3 sy~eav~~Al~~~N~~s~~~~~f~l~~v~~a~~q~v~~g~~y~l~f~i~eT~C~k~~~~~~~~C~~~~~~~~~~C~~~V~   82 (98)
T d1kwia_           3 SYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGTVT   82 (98)
T ss_dssp             HHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHcCCCCcccEEEEEEeecceeeecCCcEEEEEEEEEEeecCCcCCCChHHCccccCCcceEEEEEEE
Confidence            4789999999999999                7788 89999999998762                  56788999999


Q ss_pred             eccCCCceeEE
Q 034707           63 EKPWMQFKELK   73 (86)
Q Consensus        63 ~~pw~n~~~L~   73 (86)
                      .+||.+...|+
T Consensus        83 ~~pw~~~~~vt   93 (98)
T d1kwia_          83 LDQIKDPLDIT   93 (98)
T ss_dssp             CC----CCEEE
T ss_pred             EcCcCCEEEEE
Confidence            99999887663

>d2o9ux1 d.17.1.1 (X:1001-1096) Monellin, B & A chains together {Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Monellin
domain: Monellin, B & A chains together
species: Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]

Probab=95.56  E-value=0.056  Score=30.62  Aligned_cols=65  Identities=32%  Similarity=0.385  Sum_probs=47.5

Q ss_pred             ccceeccCCCCCHHHHHHHHHHHHHhccc-------------------------CceeeeeEEEEEEEEecCCceEEEEE
Q 034707            5 GGVREVEATANNQEIVNLARFAVDEHNKK-------------------------QQVVSGTLYDITLEAVEGGQKKLFEA   59 (86)
Q Consensus         5 GG~~~i~~~~~d~~Vq~la~~Av~~~n~~-------------------------~QVVaG~nY~l~v~~~~~~~~~~y~a   59 (86)
                      |.|.-+   .-.|--|.+++|||.+-|+-                         ..-+.|..|.|-+-++|    +.+.+
T Consensus         1 geweii---digpftqnlgkfavdeenkigqygrltfnkvirpcmkktiyenegfreikgyeyqlyvyasd----klfra   73 (96)
T d2o9ux1           1 GEWEII---DIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFREIKGYEYQLYVYASD----KLFRA   73 (96)
T ss_dssp             CCCEEE---CCSHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCSEEEEEEEEEEEETT----EEC-C
T ss_pred             CCceEE---EecchhhhhcceeecccccccccceeehhHHhHHHhhhhhhcccCceeccCcEEEEEEEecc----hhhhh
Confidence            556656   25688899999999998775                         33456888888888877    57788


Q ss_pred             EEEeccCCCceeEEEEE
Q 034707           60 KVWEKPWMQFKELKEFN   76 (86)
Q Consensus        60 ~Vw~~pw~n~~~L~sf~   76 (86)
                      .|-+---...++|+.|.
T Consensus        74 disedyktrgrkllrfn   90 (96)
T d2o9ux1          74 DISEDYKTRGRKLLRFN   90 (96)
T ss_dssp             EEEEETTTCCEEEEECC
T ss_pred             hhhhhhhhccceeEecc
Confidence            77665445568888884

>d2bo9b1 d.17.1.5 (B:1-98) Latexin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Latexin-like
domain: Latexin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.98  E-value=0.94  Score=26.29  Aligned_cols=51  Identities=20%  Similarity=0.121  Sum_probs=37.3

Q ss_pred             CCCCHHHHHHHHHHHHHhccc-----------------Ccee--eeeEEEEEEEEec---CCceEEEEEEEEe
Q 034707           13 TANNQEIVNLARFAVDEHNKK-----------------QQVV--SGTLYDITLEAVE---GGQKKLFEAKVWE   63 (86)
Q Consensus        13 ~~~d~~Vq~la~~Av~~~n~~-----------------~QVV--aG~nY~l~v~~~~---~~~~~~y~a~Vw~   63 (86)
                      +++.-.-+++|+-|+.=+|-+                 .+++  .|-+|.|++.+.+   +.....|.|+|+=
T Consensus         4 ~psh~pA~rAA~vA~hy~N~~~GSP~rl~~L~~V~~a~~e~ip~~G~Ky~L~Fs~e~~~~~e~~~~CsA~Vlf   76 (98)
T d2bo9b1           4 PPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLY   76 (98)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEE
T ss_pred             CCcchHHHHHHHHHHHHhhcccCCCceeeehhHHHhhhhhhccccCcEEEEEEEhhhcccccccceeEEEEEE
Confidence            456656677788787777766                 2333  2889999999988   3455689999987