Citrus Sinensis ID: 034823
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 82 | ||||||
| 297850348 | 78 | low-molecular-weight cysteine-rich 78 [A | 0.926 | 0.974 | 0.467 | 1e-11 | |
| 11386628 | 79 | RecName: Full=Defensin-like protein 3; A | 0.951 | 0.987 | 0.430 | 1e-11 | |
| 225458213 | 82 | PREDICTED: defensin-like protein 19 [Vit | 1.0 | 1.0 | 0.414 | 1e-11 | |
| 22329675 | 78 | defensin-like protein 19 [Arabidopsis th | 0.951 | 1.0 | 0.448 | 1e-11 | |
| 297805200 | 78 | hypothetical protein ARALYDRAFT_915784 [ | 0.951 | 1.0 | 0.397 | 4e-11 | |
| 11386640 | 79 | RecName: Full=Defensin-like protein 3; A | 0.951 | 0.987 | 0.392 | 9e-11 | |
| 63029683 | 80 | putative plant defensin PDF1.2 [Arabidop | 0.951 | 0.975 | 0.412 | 1e-10 | |
| 310697404 | 79 | defensin 1.2 [Brassica rapa subsp. campe | 0.951 | 0.987 | 0.392 | 1e-10 | |
| 297839465 | 80 | hypothetical protein ARALYDRAFT_895457 [ | 0.951 | 0.975 | 0.412 | 2e-10 | |
| 15225238 | 80 | defensin-like protein 14 [Arabidopsis th | 0.951 | 0.975 | 0.440 | 2e-10 |
| >gi|297850348|ref|XP_002893055.1| low-molecular-weight cysteine-rich 78 [Arabidopsis lyrata subsp. lyrata] gi|297338897|gb|EFH69314.1| low-molecular-weight cysteine-rich 78 [Arabidopsis lyrata subsp. lyrata] gi|410066987|emb|CCN97876.1| defensin [Arabidopsis halleri subsp. halleri] | Back alignment and taxonomy information |
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Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 6 ASITTAVALIFAFFILFASFEMPVAEAKQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDG 65
+S T + L + F++ AS EM EA+ C +R++ WTG C T C + C+ E A G
Sbjct: 3 SSYTLMLFLCLSIFLI-ASTEMMAVEARICERRSKTWTGFCGNTRGCDSQCKSWERASHG 61
Query: 66 ACHYDFPGFACFCYYNC 82
ACH FPGFACFCY+NC
Sbjct: 62 ACHAQFPGFACFCYFNC 78
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|11386628|sp|O24332.1|DEF3_RAPSA RecName: Full=Defensin-like protein 3; AltName: Full=Cysteine-rich antifungal protein 3; Short=AFP3; Flags: Precursor gi|1655685|emb|CAA65984.1| antifungal protein 3 [Raphanus sativus] | Back alignment and taxonomy information |
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| >gi|225458213|ref|XP_002281189.1| PREDICTED: defensin-like protein 19 [Vitis vinifera] gi|147772111|emb|CAN64556.1| hypothetical protein VITISV_040160 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|22329675|ref|NP_173391.2| defensin-like protein 19 [Arabidopsis thaliana] gi|57015384|sp|P82787.2|DEF19_ARATH RecName: Full=Defensin-like protein 19; AltName: Full=Defensin AMP1 protein; AltName: Full=Low-molecular-weight cysteine-rich protein 78; Short=Protein LCR78; AltName: Full=Plant defensin 1.4; Flags: Precursor gi|17380954|gb|AAL36289.1| putative defensin AMP1 protein [Arabidopsis thaliana] gi|21281052|gb|AAM45086.1| putative defensin AMP1 protein [Arabidopsis thaliana] gi|332191752|gb|AEE29873.1| defensin-like protein 19 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297805200|ref|XP_002870484.1| hypothetical protein ARALYDRAFT_915784 [Arabidopsis lyrata subsp. lyrata] gi|297316320|gb|EFH46743.1| hypothetical protein ARALYDRAFT_915784 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|11386640|sp|Q39313.1|DEF3_BRANA RecName: Full=Defensin-like protein 3; AltName: Full=Cysteine-rich antifungal protein 3; Short=AFP3; Flags: Precursor gi|1399230|gb|AAB03224.1| antifungal protein [Brassica napus] gi|60686419|gb|AAX35338.1| defensin 1.2 [Brassica napus] gi|151382079|gb|ABS11037.1| defensin [Brassica oleracea var. gemmifera] gi|218436744|dbj|BAH03381.1| plant defensin [Brassica rapa subsp. chinensis] gi|244539519|dbj|BAH82667.1| defensin 1.2 [Brassica rapa subsp. chinensis] | Back alignment and taxonomy information |
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| >gi|63029683|gb|AAY27737.1| putative plant defensin PDF1.2 [Arabidopsis halleri] | Back alignment and taxonomy information |
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| >gi|310697404|gb|ADP06657.1| defensin 1.2 [Brassica rapa subsp. campestris] | Back alignment and taxonomy information |
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| >gi|297839465|ref|XP_002887614.1| hypothetical protein ARALYDRAFT_895457 [Arabidopsis lyrata subsp. lyrata] gi|297333455|gb|EFH63873.1| hypothetical protein ARALYDRAFT_895457 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15225238|ref|NP_180171.1| defensin-like protein 14 [Arabidopsis thaliana] gi|11386634|sp|O80995.1|DEF14_ARATH RecName: Full=Defensin-like protein 14; AltName: Full=Cysteine-rich antifungal protein At2g26010; AltName: Full=Plant defensin 1.3; Flags: Precursor gi|3413711|gb|AAC31234.1| putative antifungal protein [Arabidopsis thaliana] gi|330252689|gb|AEC07783.1| defensin-like protein 14 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 82 | ||||||
| TAIR|locus:2013184 | 78 | PDF1.4 "AT1G19610" [Arabidopsi | 0.719 | 0.756 | 0.508 | 3.8e-14 | |
| TAIR|locus:2057448 | 80 | PDF1.3 "AT2G26010" [Arabidopsi | 0.951 | 0.975 | 0.392 | 2.8e-11 | |
| TAIR|locus:2163431 | 80 | PDF1.2c "AT5G44430" [Arabidops | 0.951 | 0.975 | 0.380 | 3.2e-10 | |
| TAIR|locus:2057437 | 80 | PDF1.2b "AT2G26020" [Arabidops | 0.719 | 0.737 | 0.426 | 4.1e-10 | |
| UNIPROTKB|P86973 | 50 | P86973 "Defensin D2" [Nigella | 0.609 | 1.0 | 0.42 | 1.1e-09 | |
| TAIR|locus:2163421 | 80 | PDF1.2 "AT5G44420" [Arabidopsi | 0.719 | 0.737 | 0.409 | 1.4e-09 | |
| UNIPROTKB|P86972 | 50 | P86972 "Defensin D1" [Nigella | 0.609 | 1.0 | 0.42 | 2.9e-09 | |
| TAIR|locus:2011055 | 80 | PDF1.5 "AT1G55010" [Arabidopsi | 0.707 | 0.725 | 0.333 | 4.7e-09 | |
| TAIR|locus:2204365 | 80 | LCR67 "AT1G75830" [Arabidopsis | 0.951 | 0.975 | 0.369 | 4.7e-09 | |
| UNIPROTKB|A4L7R7 | 83 | Def1 "Defensin-1" [Pinus sylve | 0.682 | 0.674 | 0.350 | 4.8e-07 |
| TAIR|locus:2013184 PDF1.4 "AT1G19610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 24 SFEMPVAEAKQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82
S EM E + C +R++ WTG C T C + C++ E A GACH FPGFACFCY+NC
Sbjct: 20 STEMMAVEGRICERRSKTWTGFCGNTRGCDSQCKRWERASHGACHAQFPGFACFCYFNC 78
|
|
| TAIR|locus:2057448 PDF1.3 "AT2G26010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163431 PDF1.2c "AT5G44430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2057437 PDF1.2b "AT2G26020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P86973 P86973 "Defensin D2" [Nigella sativa (taxid:555479)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163421 PDF1.2 "AT5G44420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P86972 P86972 "Defensin D1" [Nigella sativa (taxid:555479)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011055 PDF1.5 "AT1G55010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2204365 LCR67 "AT1G75830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A4L7R7 Def1 "Defensin-1" [Pinus sylvestris (taxid:3349)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 82 | |||
| pfam00304 | 47 | pfam00304, Gamma-thionin, Gamma-thionin family | 2e-07 |
| >gnl|CDD|109365 pfam00304, Gamma-thionin, Gamma-thionin family | Back alignment and domain information |
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Score = 42.7 bits (101), Expect = 2e-07
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 35 CSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82
C + + GPC +C CR EG G C CFC C
Sbjct: 3 CESPSGTFKGPCFSDSNCAKVCRN-EGFAGGHCSG--FRRRCFCTKPC 47
|
Length = 47 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 82 | |||
| PF00304 | 47 | Gamma-thionin: Gamma-thionin family; InterPro: IPR | 99.69 | |
| smart00505 | 45 | Knot1 Knottins. Knottins, representing plant lecti | 99.04 | |
| cd00107 | 33 | Knot1 The "knottin" fold is stable cysteine-rich s | 98.68 | |
| PF10868 | 90 | DUF2667: Protein of unknown function (DUF2667); In | 98.16 | |
| PF01097 | 34 | Defensin_2: Arthropod defensin; InterPro: IPR00154 | 96.8 | |
| PF00537 | 54 | Toxin_3: Scorpion toxin-like domain ; InterPro: IP | 96.31 | |
| PF07333 | 58 | SLR1-BP: S locus-related glycoprotein 1 binding po | 96.21 | |
| PF07127 | 54 | Nodulin_late: Late nodulin protein; InterPro: IPR0 | 95.5 | |
| PF00451 | 32 | Toxin_2: Scorpion short toxin, BmKK2; InterPro: IP | 94.48 | |
| PF14866 | 56 | Toxin_38: Potassium channel toxin | 89.82 | |
| PF08119 | 37 | Toxin_31: Scorpion acidic alpha-KTx toxin family; | 89.0 | |
| PF14865 | 59 | Macin: Macin; PDB: 2K35_A 2LN8_A. | 88.87 | |
| PF07172 | 95 | GRP: Glycine rich protein family; InterPro: IPR010 | 88.12 | |
| PF08086 | 41 | Toxin_17: Ergtoxin family; InterPro: IPR012622 The | 83.5 |
| >PF00304 Gamma-thionin: Gamma-thionin family; InterPro: IPR008176 The following small plant proteins are evolutionary related: Gamma-thionins from Triticum aestivum (Wheat) endosperm (gamma-purothionins) and gamma-hordothionins from Hordeum vulgare(Barley) are toxic to animal cells and inhibit protein synthesis in cell free systems [] | Back alignment and domain information |
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Probab=99.69 E-value=3.4e-18 Score=96.18 Aligned_cols=47 Identities=32% Similarity=0.784 Sum_probs=41.6
Q ss_pred ccccccCccceecCCCccccHHHhccccCCCCceeecCCCCcceEeecCC
Q 034823 33 KQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82 (82)
Q Consensus 33 ~~C~~~S~~~~G~C~~~~~C~~~C~~~Eg~~~G~C~~~~~~~~C~C~~~C 82 (82)
++|+++|++|+|+|++|++|+++|++ |||.+|+|+++ .++|+|++||
T Consensus 1 k~C~~~S~tf~G~C~~~~~C~~~C~~-eg~~~G~C~~~--~~~C~C~~~C 47 (47)
T PF00304_consen 1 KTCERPSGTFKGLCFSDSNCANVCIN-EGFTGGKCSGP--LRRCFCTKPC 47 (47)
T ss_dssp EEEEEESSSS-SS-SSHHHHHHHHHH-CTSSEEEEETT--TTEEEEEEEE
T ss_pred CcccccCCCceeECCCcchhhHHhcc-CCCCCCEeCCC--CceEEEeCcC
Confidence 57999999999999999999999997 99999999964 5899999997
|
A flower-specific thionin (FST) from Nicotiana tabacum (Common Tobacco)[]. Antifungal proteins (AFP) from the seeds of Brassicaceae species such as radish, mustard, turnip and Arabidopsis thaliana (Thale Cress)[]. Inhibitors of insect alpha-amylases from sorghum []. Probable protease inhibitor P322 from Solanum tuberosum (Potato). A germination-related protein from Vigna unguiculata (Cowpea) []. Anther-specific protein SF18 from sunflower. SF18 is a protein that contains a gamma-thionin domain at its N terminus and a proline-rich C-terminal domain. Glycine max (Soybean) sulphur-rich protein SE60 []. Vicia faba (Broad bean) antibacterial peptides fabatin-1 and -2. In their mature form, these proteins generally consist of about 45 to 50 amino-acid residues. As shown in the following schematic representation, these peptides contain eight conserved cysteines involved in disulphide bonds. +-------------------------------------------+ | +-------------------+ | | | | | xxCxxxxxxxxxxCxxxxxCxxxCxxxxxxxxxCxxxxxxCxCxxxC | | | | +---|----------------+ | +------------------+ 'C': conserved cysteine involved in a disulphide bond. The folded structure of Gamma-purothionin is characterised by a well-defined 3-stranded anti-parallel beta-sheet and a short alpha-helix []. Three disulphide bridges are located in the hydrophobic core between the helix and sheet, forming a cysteine-stabilised alpha-helical motif. This structure differs from that of the plant alpha- and beta- thionins, but is analogous to scorpion toxins and insect defensins.; GO: 0006952 defense response; PDB: 4AB0_A 4AAZ_B 1N4N_A 2KPY_A 1JKZ_A 1AYJ_A 1GPT_A 1BK8_A 2GL1_A 1GPS_A .... |
| >smart00505 Knot1 Knottins | Back alignment and domain information |
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| >cd00107 Knot1 The "knottin" fold is stable cysteine-rich scaffold, in which one disulfide bridge crosses the macrocycle made by two other disulfide bridges and the connecting backbone segments | Back alignment and domain information |
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| >PF10868 DUF2667: Protein of unknown function (DUF2667); InterPro: IPR022618 This family of proteins with unknown function appears to be restricted to Arabidopsis thaliana | Back alignment and domain information |
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| >PF01097 Defensin_2: Arthropod defensin; InterPro: IPR001542 Arthropod defensins are a family of insect and scorpion cysteine-rich antibacterial peptides, primarily active against Gram-positive bacteria [, , , , ] | Back alignment and domain information |
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| >PF00537 Toxin_3: Scorpion toxin-like domain ; InterPro: IPR002061 Scorpion toxins, which may be mammal or insect specific, bind to sodium channels, inhibiting the inactivation of activated channels and blocking neuronal transmission | Back alignment and domain information |
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| >PF07333 SLR1-BP: S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP); InterPro: IPR010851 This entry consists of a number of cysteine rich SLR1 binding pollen coat like proteins | Back alignment and domain information |
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| >PF07127 Nodulin_late: Late nodulin protein; InterPro: IPR009810 This family consists of several plant specific late nodulin sequences which are homologous to the Pisum sativum (Garden pea) ENOD3 protein | Back alignment and domain information |
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| >PF00451 Toxin_2: Scorpion short toxin, BmKK2; InterPro: IPR001947 Scorpion venoms contain a variety of peptides toxic to mammals, insects and crustaceans | Back alignment and domain information |
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| >PF14866 Toxin_38: Potassium channel toxin | Back alignment and domain information |
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| >PF08119 Toxin_31: Scorpion acidic alpha-KTx toxin family; InterPro: IPR012635 This entry represents proteins that are acidic alpha-KTx short chain scorpion toxins | Back alignment and domain information |
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| >PF14865 Macin: Macin; PDB: 2K35_A 2LN8_A | Back alignment and domain information |
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| >PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins | Back alignment and domain information |
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| >PF08086 Toxin_17: Ergtoxin family; InterPro: IPR012622 The Ergtoxin (ErgTx) family is a class of peptides from scorpion venom that specifically block ERG (ether-a-go-go-related gene) K+ channels of the nerve, heart and endocrine cells [, , ] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 82 | ||||
| 1ayj_A | 51 | Determination Of The Three-Dimensional Solution Str | 2e-05 | ||
| 1bk8_A | 50 | Determination Of The Three-Dimensional Solution Str | 1e-04 | ||
| 2gl1_A | 47 | Nmr Solution Structure Of Vigna Radiata Defensin 2 | 2e-04 | ||
| 3psm_A | 47 | .98a Crystal Structure Of A Dimeric Plant Defensin | 3e-04 | ||
| 2lj7_A | 47 | 3d Solution Structure Of Plant Defensin Lc-Def Leng | 3e-04 |
| >pdb|1AYJ|A Chain A, Determination Of The Three-Dimensional Solution Structure Of Raphanus Sativus Antifungal Protein 1 (Rs-Afp1) By 1h Nmr, 20 Structures Length = 51 | Back alignment and structure |
|
| >pdb|1BK8|A Chain A, Determination Of The Three-Dimensional Solution Structure Of Aesculus Hippocastanum Antimicrobial Protein 1 (Ah- Amp1) By 1h Nmr, 25 Structures Length = 50 | Back alignment and structure |
| >pdb|2GL1|A Chain A, Nmr Solution Structure Of Vigna Radiata Defensin 2 (Vrd2) Length = 47 | Back alignment and structure |
| >pdb|3PSM|A Chain A, .98a Crystal Structure Of A Dimeric Plant Defensin Spe10 Length = 47 | Back alignment and structure |
| >pdb|2LJ7|A Chain A, 3d Solution Structure Of Plant Defensin Lc-Def Length = 47 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 82 | |||
| 1ayj_A | 51 | RS-AFP1, antifungal protein 1; fungicide, plant de | 4e-13 | |
| 2kpy_A | 108 | Major pollen allergen ART V 1; defensin-like, poly | 4e-13 | |
| 1bk8_A | 50 | AH-AMP1, antimicrobial protein 1; plant defensin, | 4e-12 | |
| 3psm_A | 47 | Defensin, SPE10; dimer, antimicrobial protein; 0.9 | 9e-07 | |
| 1jkz_A | 46 | PSD1, defense-related peptide 1; plant defensin, C | 1e-05 |
| >1ayj_A RS-AFP1, antifungal protein 1; fungicide, plant defensin, cysteine-stabilized ALFA/beta motif; HET: PCA; NMR {Raphanus sativus var} SCOP: g.3.7.5 Length = 51 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 4e-13
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 33 KQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82
K C + + W+G C +C+N C E A G+C+Y FP C CY+ C
Sbjct: 2 KLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCICYFPC 51
|
| >2kpy_A Major pollen allergen ART V 1; defensin-like, poly-proline; NMR {Artemisia vulgaris} Length = 108 | Back alignment and structure |
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| >1bk8_A AH-AMP1, antimicrobial protein 1; plant defensin, cysteine-stabilized ALFA/ beta motif; NMR {Aesculus hippocastanum} SCOP: g.3.7.5 Length = 50 | Back alignment and structure |
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| >3psm_A Defensin, SPE10; dimer, antimicrobial protein; 0.98A {Pachyrhizus erosus} PDB: 2gl1_A Length = 47 | Back alignment and structure |
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| >1jkz_A PSD1, defense-related peptide 1; plant defensin, Cys-rich, antifungal, antifungal protein; NMR {Pisum sativum} SCOP: g.3.7.5 Length = 46 | Back alignment and structure |
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 82 | |||
| 2ksk_A | 71 | Sugarcane defensin 5; csalphabeta motif, antimicro | 99.83 | |
| 1ayj_A | 51 | RS-AFP1, antifungal protein 1; fungicide, plant de | 99.81 | |
| 2lr3_A | 47 | Defensin; fungal disease, antifungal agent, antifu | 99.78 | |
| 1n4n_A | 47 | PHD1, floral defensin-like protein 1; cysteine-sta | 99.76 | |
| 1mr4_A | 47 | Nicotiana alata plant defensin 1 (NAD1); cysteine- | 99.76 | |
| 1gps_A | 47 | Gamma-1-P thionin; plant toxin; NMR {Triticum turg | 99.76 | |
| 3psm_A | 47 | Defensin, SPE10; dimer, antimicrobial protein; 0.9 | 99.76 | |
| 1bk8_A | 50 | AH-AMP1, antimicrobial protein 1; plant defensin, | 99.76 | |
| 2kpy_A | 108 | Major pollen allergen ART V 1; defensin-like, poly | 99.74 | |
| 1jkz_A | 46 | PSD1, defense-related peptide 1; plant defensin, C | 99.74 | |
| 1ti5_A | 46 | Plant defensin; insecticidal activity, MUNG bean, | 99.73 | |
| 1myn_A | 44 | Drosomycin; insect immunity, antifungal, csalpha-b | 99.16 | |
| 1i2u_A | 44 | Defensin heliomicin; alpha-beta protein, CSAB moti | 98.32 | |
| 1zfu_A | 40 | Plectasin; defensin,antimicrobial peptide,cysteine | 96.75 | |
| 2lr5_A | 38 | Micasin; antimicrobial protein; NMR {Arthroderma o | 95.68 | |
| 1fjn_A | 39 | Defensin MGD-1; cystine stabilized alpha-beta moti | 96.64 | |
| 1wmt_A | 41 | ISTX; neurotoxin, potassium channel blocker, solut | 96.53 | |
| 1brz_A | 54 | Brazzein; sweet protein, cysteine-stabilized alpha | 96.53 | |
| 1c49_A | 35 | Toxin K-beta; scorpion toxin, potassium channels b | 96.5 | |
| 1ica_A | 40 | Insect defensin A; antibacterial protein; NMR {Pro | 96.39 | |
| 1quz_A | 35 | HSTX1 toxin; scorpion toxin, alpha beta, molecular | 96.37 | |
| 2k9o_A | 36 | VM24 scorpion toxin; ALFA/beta scaffold, beta shee | 96.29 | |
| 2e3g_A | 40 | Defensin, mutant DEF-DAA; insect defensin, CSAB mo | 96.28 | |
| 1qky_A | 38 | PI7, toxin 7 from pandinus imperator; neurotoxin; | 96.24 | |
| 1n8m_A | 38 | PI4, potassium channel blocking toxin 4; potassium | 96.14 | |
| 1wt7_A | 41 | BUTX-MTX; maurotoxin, butantoxin, scorpion toxin, | 96.07 | |
| 2b68_A | 43 | Defensin; antibacterial peptide, cysteine-rich pep | 96.07 | |
| 1jxc_A | 68 | Putative trypsin inhibitor ATTI-2; chymotrypsin in | 96.06 | |
| 2e3e_A | 45 | Defensin, mutant DEF-BBB; insect defensin, CSAB mo | 96.03 | |
| 1t1t_A | 63 | Kurtoxin, KTX; cysteine stabilized alpha-beta; NMR | 95.97 | |
| 1aho_A | 64 | Toxin II; scorpion, AB initio phasing, neurotoxin; | 95.87 | |
| 1nra_A | 63 | Neurotoxin V, CSE-V; NMR {Centruroides sculpturatu | 95.8 | |
| 1snb_A | 64 | Neurotoxin BMK M8; sodium channel inhibitor, scorp | 95.79 | |
| 1kv0_A | 66 | BMK M7, BMKM7, alpha-like toxin BMK-M7; non-prolyl | 95.77 | |
| 1wz5_A | 35 | Potassium channel blocking toxin 1; ionic channel | 95.73 | |
| 1i6f_A | 60 | Neurotoxin V-5, CSE-V5; scorpion, sodium channel, | 95.69 | |
| 2yeo_A | 65 | Alpha-insect toxin lqhait; defense response; HET: | 95.66 | |
| 1dq7_A | 64 | Neurotoxin; 2.20A {Mesobuthus tamulus} SCOP: g.3.7 | 95.56 | |
| 2i61_A | 62 | Insect toxin 2; scorpion toxin, depressant, anti-i | 95.49 | |
| 1j5j_A | 36 | BEKM-1 toxin; alpha-beta motif, cysteine-knot moti | 95.33 | |
| 1bmr_A | 68 | LQH III alpha-like toxin; scorpion toxin, sodium c | 95.3 | |
| 1cmr_A | 31 | Charybdotoxin, alpha chimera; antagonist of nicoti | 95.25 | |
| 1hly_A | 39 | Hongotoxin 1; scorpion, centruroides limbatus HGTX | 95.17 | |
| 1hp2_A | 37 | Tityustoxin K alpha; K+ channel, scorpion toxin, a | 95.12 | |
| 2axk_A | 38 | Discrepin; scorpion toxin, A-current, K+-channel,; | 95.11 | |
| 2ln4_A | 44 | Coprisin; antimicrobial protein, defensin-like pep | 95.04 | |
| 1big_A | 37 | Toxin BMTX1; scorpion, neurotoxin, structure, larg | 95.03 | |
| 1bah_A | 37 | Charybdotoxin, chabii; neurotoxin, potassium chann | 95.02 | |
| 1c55_A | 40 | Butantoxin; structure; NMR {Tityus serrulatus} SCO | 94.96 | |
| 1t0z_A | 72 | Insect neurotoxin; alpha-beta; 2.60A {Mesobuthus m | 94.94 | |
| 1m2s_A | 37 | Toxin BMTX3, neurotoxin TX3; alpha/beta scaffold; | 94.74 | |
| 1pe4_A | 67 | Neurotoxin CN11, CN12; scorpion toxin, sodium chan | 94.64 | |
| 1npi_A | 61 | Toxin VII, TSTX-VII; xcitatory neurotoxin; 1.16A { | 94.57 | |
| 1agt_A | 38 | Agitoxin 2; potassium channel blocker, neurotoxin; | 94.55 | |
| 1b3c_A | 64 | Protein (neurotoxin CSE-I); scorpion neurotoxin, N | 94.49 | |
| 2koz_A | 33 | Nasonin-1; alpha/beta structure, disulfide bonds, | 94.49 | |
| 2sn3_A | 65 | Scorpion neurotoxin (variant 3); 1.20A {Centruroid | 94.46 | |
| 2ljm_A | 82 | CSS II, cssii, beta-mammal toxin CSS2; CS ALFA bet | 94.16 | |
| 2yc1_C | 66 | Beta-mammal toxin CN2; immune system-toxin complex | 94.08 | |
| 1tsk_A | 35 | TS KAPA; scorpion, toxin, potassium channel, neuro | 93.69 | |
| 1bcg_A | 77 | Toxin BJXTR-IT; excitatory neurotoxin; 2.10A {Hott | 93.21 | |
| 2ddl_A | 33 | Leiurotoxin, LEI4P; scorpion toxin analog; NMR {Sy | 92.92 | |
| 1r1g_A | 31 | Neurotoxin BMK37, BMBKTTX1; siras from S atoms, sc | 92.18 | |
| 1pjv_A | 32 | Cobatoxin 1, COTX1, GTIX; scorpion toxin, centuroi | 91.81 | |
| 2lt8_A | 42 | Eurocin; A/B-fold, cysteine stabilised, antimicrob | 88.34 | |
| 2k35_A | 60 | Hydramacin-1; antimicrobial protein; NMR {Hydra} | 86.37 | |
| 1ne5_A | 42 | Ergtoxin, cnerg1, ERGTX; alpha-helix, triple-stran | 85.23 |
| >2ksk_A Sugarcane defensin 5; csalphabeta motif, antimicrobial protein; NMR {Saccharum officinarum} | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-22 Score=118.88 Aligned_cols=54 Identities=30% Similarity=0.681 Sum_probs=50.0
Q ss_pred hhhcccccccCccceecCCCccccHHHhccc-cCCCCceeecCCCCcceEeecCC
Q 034823 29 VAEAKQCSKRAQKWTGPCIKTGSCRNHCRKR-EGAVDGACHYDFPGFACFCYYNC 82 (82)
Q Consensus 29 ~~ea~~C~~~S~~~~G~C~~~~~C~~~C~~~-Eg~~~G~C~~~~~~~~C~C~~~C 82 (82)
++||++|+++|++|+|+|++|++|+++|+++ |||.+|+|++++|.++|+|+++|
T Consensus 3 ~aEAr~C~s~S~~fkG~C~~~~nC~~vC~~~~Egf~~G~C~g~~~~rrC~Ctk~C 57 (71)
T 2ksk_A 3 PTPTPICKSRSHEYKGRCIQDMDCNAACVKESESYTGGFCNGRPPFKQCFCTKPC 57 (71)
T ss_dssp CCSSCCEEEECSSSCSSCCCHHHHHHHHHHHCSSCCEEEEECCSSSCEEEEEECC
T ss_pred cccchhhhccCCCCeEEcCCCccHHHhccCcCCCCCCCCcCCCCCCceEEEECCc
Confidence 4899999999999999999999999999965 99999999976567899999998
|
| >1ayj_A RS-AFP1, antifungal protein 1; fungicide, plant defensin, cysteine-stabilized ALFA/beta motif; HET: PCA; NMR {Raphanus sativus var} SCOP: g.3.7.5 | Back alignment and structure |
|---|
| >2lr3_A Defensin; fungal disease, antifungal agent, antifungal protein; NMR {Medicago truncatula} | Back alignment and structure |
|---|
| >1n4n_A PHD1, floral defensin-like protein 1; cysteine-stabilised alpha-beta motif, fifth disulfide bond, plant protein; NMR {Petunia x hybrida} SCOP: g.3.7.5 | Back alignment and structure |
|---|
| >1mr4_A Nicotiana alata plant defensin 1 (NAD1); cysteine-stabilized alpha-beta motif, plant defensin fold, plant protein; NMR {Nicotiana tabacum} SCOP: g.3.7.5 PDB: 4aaz_A 4ab0_A | Back alignment and structure |
|---|
| >1gps_A Gamma-1-P thionin; plant toxin; NMR {Triticum turgidum} SCOP: g.3.7.5 PDB: 1gpt_A | Back alignment and structure |
|---|
| >3psm_A Defensin, SPE10; dimer, antimicrobial protein; 0.98A {Pachyrhizus erosus} SCOP: g.3.7.5 PDB: 2gl1_A 2lj7_A | Back alignment and structure |
|---|
| >1bk8_A AH-AMP1, antimicrobial protein 1; plant defensin, cysteine-stabilized ALFA/ beta motif; NMR {Aesculus hippocastanum} SCOP: g.3.7.5 | Back alignment and structure |
|---|
| >2kpy_A Major pollen allergen ART V 1; defensin-like, poly-proline; NMR {Artemisia vulgaris} | Back alignment and structure |
|---|
| >1jkz_A PSD1, defense-related peptide 1; plant defensin, Cys-rich, antifungal, antifungal protein; NMR {Pisum sativum} SCOP: g.3.7.5 | Back alignment and structure |
|---|
| >1ti5_A Plant defensin; insecticidal activity, MUNG bean, plant protein; NMR {Vigna radiata} | Back alignment and structure |
|---|
| >1myn_A Drosomycin; insect immunity, antifungal, csalpha-beta motif, signal protein; NMR {Drosophila melanogaster} SCOP: g.3.7.4 | Back alignment and structure |
|---|
| >1i2u_A Defensin heliomicin; alpha-beta protein, CSAB motif (cysteine stabilized alpha- helix beta-sheet motif), antifungal protein; NMR {Heliothis virescens} SCOP: g.3.7.4 PDB: 1ozz_A 1i2v_A 1p0a_A 1p00_A | Back alignment and structure |
|---|
| >1zfu_A Plectasin; defensin,antimicrobial peptide,cysteine stabilized alpha- beta motif, antimicrobial protein; NMR {Pseudoplectania nigrella} PDB: 3e7r_L 3e7u_X | Back alignment and structure |
|---|
| >2lr5_A Micasin; antimicrobial protein; NMR {Arthroderma otae} | Back alignment and structure |
|---|
| >1fjn_A Defensin MGD-1; cystine stabilized alpha-beta motif, antibacterial, disulfide bond, synthesis, antimicrobial protein; NMR {Synthetic} SCOP: g.3.7.3 | Back alignment and structure |
|---|
| >1wmt_A ISTX; neurotoxin, potassium channel blocker, solution structure, alpha-K toxin family, scorpion toxin; NMR {Synthetic} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >1brz_A Brazzein; sweet protein, cysteine-stabilized alpha-beta; HET: PCA; NMR {Pentadiplandra brazzeana} SCOP: g.3.7.5 PDB: 2brz_A* 2kgq_A 2kyq_A | Back alignment and structure |
|---|
| >1c49_A Toxin K-beta; scorpion toxin, potassium channels blockers, alpha-K toxin family, neurotoxin, solution structure; NMR {Pandinus imperator} SCOP: g.3.7.2 PDB: 2pta_A | Back alignment and structure |
|---|
| >1ica_A Insect defensin A; antibacterial protein; NMR {Protophormia terraenovae} SCOP: g.3.7.4 PDB: 1l4v_A 2lld_A 2ny8_X | Back alignment and structure |
|---|
| >1quz_A HSTX1 toxin; scorpion toxin, alpha beta, molecular modeling, potassium channel; NMR {Synthetic} SCOP: k.23.1.1 PDB: 1y2p_A 1wpd_A | Back alignment and structure |
|---|
| >2k9o_A VM24 scorpion toxin; ALFA/beta scaffold, beta sheet, ALFA helix, scorpion K+ toxin; NMR {Synthetic} | Back alignment and structure |
|---|
| >2e3g_A Defensin, mutant DEF-DAA; insect defensin, CSAB motif, antibacterial, antimicrobial protein; NMR {Anopheles gambiae} PDB: 2nz3_A | Back alignment and structure |
|---|
| >1qky_A PI7, toxin 7 from pandinus imperator; neurotoxin; NMR {Pandinus imperator} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >1n8m_A PI4, potassium channel blocking toxin 4; potassium channel blocker, disulfide bridge stabilized alpha beta motif; NMR {Synthetic} SCOP: g.3.7.2 PDB: 1v56_A 1txm_A | Back alignment and structure |
|---|
| >1wt7_A BUTX-MTX; maurotoxin, butantoxin, scorpion toxin, K+ channels, molecular contacts, toxin affinity; NMR {Synthetic} SCOP: g.3.7.2 PDB: 2z3s_A | Back alignment and structure |
|---|
| >2b68_A Defensin; antibacterial peptide, cysteine-rich peptide, antimicrobial protein; NMR {Crassostrea gigas} | Back alignment and structure |
|---|
| >1jxc_A Putative trypsin inhibitor ATTI-2; chymotrypsin inhibitor, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: g.3.7.5 | Back alignment and structure |
|---|
| >2e3e_A Defensin, mutant DEF-BBB; insect defensin, CSAB motif, antibacterial, antimicrobial protein; NMR {Anopheles gambiae} PDB: 2e3f_A 2ny9_X | Back alignment and structure |
|---|
| >1t1t_A Kurtoxin, KTX; cysteine stabilized alpha-beta; NMR {Parabuthus transvaalicus} | Back alignment and structure |
|---|
| >1aho_A Toxin II; scorpion, AB initio phasing, neurotoxin; 0.96A {Androctonus australis} SCOP: g.3.7.1 PDB: 1ptx_A 4aei_A* 1seg_A 2kbh_A 2kbj_A | Back alignment and structure |
|---|
| >1nra_A Neurotoxin V, CSE-V; NMR {Centruroides sculpturatus} SCOP: g.3.7.1 PDB: 1nrb_A | Back alignment and structure |
|---|
| >1snb_A Neurotoxin BMK M8; sodium channel inhibitor, scorpion; 1.90A {Mesobuthus martensii} SCOP: g.3.7.1 | Back alignment and structure |
|---|
| >1kv0_A BMK M7, BMKM7, alpha-like toxin BMK-M7; non-prolyl CIS peptide bond, CIS/trans isomerization, dimeric structure, scorpion toxin; 1.40A {Mesobuthus martensii} SCOP: g.3.7.1 | Back alignment and structure |
|---|
| >1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator} | Back alignment and structure |
|---|
| >1i6f_A Neurotoxin V-5, CSE-V5; scorpion, sodium channel, alpha helix, beta sheet, disulfide linkages; NMR {Centruroides sculpturatus} SCOP: g.3.7.1 PDB: 1i6g_A 1nh5_A | Back alignment and structure |
|---|
| >2yeo_A Alpha-insect toxin lqhait; defense response; HET: DR8 DR0 EDO; 1.08A {Leiurus quinquestriatus hebraeus} PDB: 1lqh_A 1lqi_A 2asc_A* 2atb_A 1lqq_A 1t7e_A 1djt_A 1sn1_A 1zvg_A 1t7b_A 1zut_A 1t7a_A 1zu3_A 1chz_A 1zve_A 1zyv_A 1zyw_A 1omy_A 2e0h_A 2kbk_A ... | Back alignment and structure |
|---|
| >1dq7_A Neurotoxin; 2.20A {Mesobuthus tamulus} SCOP: g.3.7.1 PDB: 2a7t_A | Back alignment and structure |
|---|
| >2i61_A Insect toxin 2; scorpion toxin, depressant, anti-insect, sodium channel modifer; 1.20A {Leiurus quinquestriatus hebraeus} | Back alignment and structure |
|---|
| >1j5j_A BEKM-1 toxin; alpha-beta motif, cysteine-knot motif; NMR {Mesobuthus eupeus} SCOP: g.3.7.2 PDB: 1lgl_A | Back alignment and structure |
|---|
| >1bmr_A LQH III alpha-like toxin; scorpion toxin, sodium channel inhibitor; NMR {Leiurus quinquestriatus hebraeus} SCOP: g.3.7.1 PDB: 1fh3_A | Back alignment and structure |
|---|
| >1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >1hly_A Hongotoxin 1; scorpion, centruroides limbatus HGTX1, potassium channel; NMR {Centruroides limbatus} SCOP: g.3.7.2 PDB: 1mtx_A 1sxm_A | Back alignment and structure |
|---|
| >1hp2_A Tityustoxin K alpha; K+ channel, scorpion toxin, alpha-K toxin,; NMR {Tityus serrulatus} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >2axk_A Discrepin; scorpion toxin, A-current, K+-channel,; HET: PCA; NMR {Synthetic} | Back alignment and structure |
|---|
| >2ln4_A Coprisin; antimicrobial protein, defensin-like peptide; NMR {Copris tripartitus} | Back alignment and structure |
|---|
| >1big_A Toxin BMTX1; scorpion, neurotoxin, structure, large conductance potassium channel, voltage gated potassium channel; HET: PCA; NMR {Mesobuthus martensii} SCOP: g.3.7.2 PDB: 2bmt_A* | Back alignment and structure |
|---|
| >1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A* | Back alignment and structure |
|---|
| >1c55_A Butantoxin; structure; NMR {Tityus serrulatus} SCOP: g.3.7.2 PDB: 1c56_A | Back alignment and structure |
|---|
| >1t0z_A Insect neurotoxin; alpha-beta; 2.60A {Mesobuthus martensii} SCOP: g.3.7.1 PDB: 1wwn_A | Back alignment and structure |
|---|
| >1m2s_A Toxin BMTX3, neurotoxin TX3; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >1pe4_A Neurotoxin CN11, CN12; scorpion toxin, sodium channels alpha toxin; NMR {Centruroides noxius} SCOP: g.3.7.1 | Back alignment and structure |
|---|
| >1npi_A Toxin VII, TSTX-VII; xcitatory neurotoxin; 1.16A {Tityus serrulatus} SCOP: g.3.7.1 PDB: 1b7d_A | Back alignment and structure |
|---|
| >1agt_A Agitoxin 2; potassium channel blocker, neurotoxin; NMR {Leiurus quinquestriatus hebraeus} SCOP: g.3.7.2 PDB: 1xsw_A 2ktx_A 2uvs_A 3odv_A* 1ktx_A 2ck4_A 1sco_A 2k4u_A 1bkt_A 2ck5_A 2kir_A | Back alignment and structure |
|---|
| >1b3c_A Protein (neurotoxin CSE-I); scorpion neurotoxin, NEW world toxin; NMR {Centruroides sculpturatus} SCOP: g.3.7.1 PDB: 2b3c_A | Back alignment and structure |
|---|
| >2koz_A Nasonin-1; alpha/beta structure, disulfide bonds, de novo protein; NMR {Synthetic construct} PDB: 2kp0_A | Back alignment and structure |
|---|
| >2sn3_A Scorpion neurotoxin (variant 3); 1.20A {Centruroides exilicauda} SCOP: g.3.7.1 PDB: 1jza_A 1jzb_A 1vna_A 1vnb_A 2kja_A | Back alignment and structure |
|---|
| >2ljm_A CSS II, cssii, beta-mammal toxin CSS2; CS ALFA beta; NMR {Centruroides suffusus suffusus} | Back alignment and structure |
|---|
| >2yc1_C Beta-mammal toxin CN2; immune system-toxin complex, scorpion toxin; 1.90A {Centruroides noxius hoffmann} PDB: 2ybr_C 1cn2_A 2li7_A | Back alignment and structure |
|---|
| >1tsk_A TS KAPA; scorpion, toxin, potassium channel, neurotoxin; NMR {Tityus serrulatus} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >1bcg_A Toxin BJXTR-IT; excitatory neurotoxin; 2.10A {Hottentotta judaicus} SCOP: g.3.7.1 | Back alignment and structure |
|---|
| >2ddl_A Leiurotoxin, LEI4P; scorpion toxin analog; NMR {Synthetic} | Back alignment and structure |
|---|
| >1r1g_A Neurotoxin BMK37, BMBKTTX1; siras from S atoms, scorpion toxin, reductive dimethylation; HET: MLY; 1.72A {Synthetic} SCOP: g.3.7.2 PDB: 1q2k_A 3e8y_X | Back alignment and structure |
|---|
| >1pjv_A Cobatoxin 1, COTX1, GTIX; scorpion toxin, centuroides noxius, K+ channel, chemical synthesis, 3-D structure, 1H-spectroscopy, circular dichroism; NMR {Synthetic} SCOP: g.3.7.2 | Back alignment and structure |
|---|
| >2lt8_A Eurocin; A/B-fold, cysteine stabilised, antimicrobial protein; NMR {Eurotium amstelodami} | Back alignment and structure |
|---|
| >2k35_A Hydramacin-1; antimicrobial protein; NMR {Hydra} | Back alignment and structure |
|---|
| >1ne5_A Ergtoxin, cnerg1, ERGTX; alpha-helix, triple-stranded beta-sheet; NMR {Synthetic} SCOP: g.3.7.2 PDB: 1px9_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 82 | ||||
| d1ayja_ | 51 | g.3.7.5 (A:) Antifungal protein 1 (RS-AFP1) {Radis | 6e-14 | |
| d1bk8a_ | 50 | g.3.7.5 (A:) Antimicrobial protein 1 (AH-AMP1) {Ho | 3e-12 | |
| d1jkza_ | 46 | g.3.7.5 (A:) Defensin 1 (PSD1) {Pea (Pisum sativum | 1e-06 | |
| d1gpsa_ | 47 | g.3.7.5 (A:) gamma-Thionin {English wheat (Triticu | 0.001 |
| >d1ayja_ g.3.7.5 (A:) Antifungal protein 1 (RS-AFP1) {Radish (Raphanus sativus) [TaxId: 3726]} Length = 51 | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: Scorpion toxin-like family: Plant defensins domain: Antifungal protein 1 (RS-AFP1) species: Radish (Raphanus sativus) [TaxId: 3726]
Score = 58.0 bits (140), Expect = 6e-14
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 33 KQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82
K C + + W+G C +C+N C E A G+C+Y FP C CY+ C
Sbjct: 2 KLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCICYFPC 51
|
| >d1bk8a_ g.3.7.5 (A:) Antimicrobial protein 1 (AH-AMP1) {Horse chestnut (Aesculus hippocastanum) [TaxId: 43364]} Length = 50 | Back information, alignment and structure |
|---|
| >d1jkza_ g.3.7.5 (A:) Defensin 1 (PSD1) {Pea (Pisum sativum) [TaxId: 3888]} Length = 46 | Back information, alignment and structure |
|---|
| >d1gpsa_ g.3.7.5 (A:) gamma-Thionin {English wheat (Triticum turgidum) [TaxId: 4571]} Length = 47 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 82 | |||
| d1gpsa_ | 47 | gamma-Thionin {English wheat (Triticum turgidum) [ | 99.79 | |
| d1mr4a_ | 47 | Floral defensin 1 {Common tobacco (Nicotiana tabac | 99.79 | |
| d1n4na_ | 47 | Floral defensin 1 {Garden petunia (Petunia x hybri | 99.77 | |
| d1ayja_ | 51 | Antifungal protein 1 (RS-AFP1) {Radish (Raphanus s | 99.7 | |
| d1bk8a_ | 50 | Antimicrobial protein 1 (AH-AMP1) {Horse chestnut | 99.63 | |
| d1jkza_ | 46 | Defensin 1 (PSD1) {Pea (Pisum sativum) [TaxId: 388 | 99.46 | |
| d1myna_ | 44 | Drosomycin {Fruit fly (Drosophila melanogaster) [T | 98.51 | |
| d1jxca_ | 68 | Trypsin/chymotrypsin inhibitor ATT {Mouse-ear cres | 97.02 | |
| d1kv0a_ | 66 | Tx10 alpha-like toxin {Chinese scorpion (Buthus ma | 96.75 | |
| d1fjna_ | 39 | Defensin MGD-1 {Mediterranean mussel (Mytilus gall | 96.61 | |
| d2asca1 | 65 | alpha toxin {Scorpion (Leiurus quinquestriatus heb | 96.53 | |
| d1ahoa_ | 64 | Scorpion toxin {Scorpion (Androctonus australis he | 96.18 | |
| d1snba_ | 64 | Scorpion toxin {Scorpion (Buthus martensii), toxin | 96.18 | |
| d1dq7a_ | 64 | Scorpion toxin {Indian red scorpion (Buthus tamulu | 96.17 | |
| d1bmra_ | 67 | LQH III alpha-like toxin, LQH {Hebraei scorpion (L | 96.02 | |
| d1nraa_ | 63 | Scorpion toxin {Centruroides sculpturatus, variant | 95.95 | |
| d1nh5a_ | 60 | Scorpion toxin {Bark scorpion (Centruroides sculpt | 95.6 | |
| d1r1ga_ | 31 | Neurotoxin bmk37 {Chinese scorpion (Buthus martens | 95.24 | |
| d1ozza_ | 44 | Defensin ARD1 {Archaeoprepona demophon [TaxId: 191 | 95.19 | |
| d1icaa_ | 40 | Defensin A {Flesh fly (Phormia terranovae) [TaxId: | 94.82 | |
| d1npia_ | 61 | Scorpion toxin {Brazilian scorpion (Tityus serrula | 94.66 | |
| d1tska_ | 35 | Toxin ts kappa {Scorpion (Tityus serrulatus) [TaxI | 93.95 | |
| d1pjva_ | 32 | Cobatoxin 1 {Scorpion (Centruroides noxius) [TaxId | 93.91 | |
| d2sn3a_ | 65 | Scorpion toxin {Centruroides sculpturatus, variant | 93.47 | |
| d1t0za_ | 72 | Scorpion toxin {Scorpion (Buthus martensii), BmK I | 92.96 | |
| d1bcga_ | 74 | Scorpion toxin {Scorpion (Buthotus judaicus), BJXT | 92.62 | |
| d1cn2a_ | 66 | Scorpion toxin {Mexican scorpion (Centruroides nox | 92.56 | |
| d1m2sa_ | 37 | Bmtx3 {Buthus martensii karsch [TaxId: 34649]} | 91.76 | |
| d1wmta_ | 41 | Istx {Scorpion (Opisthacanthus madagascariensis) [ | 91.68 | |
| d2b3ca_ | 64 | Scorpion toxin {Centruroides sculpturatus, beta [T | 91.33 | |
| d1biga_ | 37 | Bmtx1 {Buthus martensii [TaxId: 34649]} | 90.95 | |
| d1j5ja_ | 36 | Bekm-1 {Lesser asian scorpion (Buthus eupeus) [Tax | 90.78 | |
| d2crda_ | 37 | Charybdotoxin {Scorpion (Leiurus quinquestriatus h | 90.78 | |
| d1cmra_ | 31 | Charybdotoxin {Scorpion (Leiurus quinquestriatus h | 90.56 | |
| d1pe4a_ | 67 | Scorpion toxin {Mexican scorpion (Centruroides nox | 90.15 | |
| d1wpda_ | 34 | Maurotoxin {Scorpion (Scorpio maurus) [TaxId: 5395 | 88.18 | |
| d1jlza_ | 26 | alpha-KTX, K+-channel blocker {Scorpion (Tityus ca | 84.94 | |
| d1hp2a_ | 37 | alpha-KTX, K+-channel blocker {Brazilian scorpion | 84.06 | |
| d1c55a_ | 40 | Butantoxin {Brazilian scorpion (Tityus serrulatus) | 84.04 | |
| d1px9a_ | 42 | Ergtoxin (HERG specific toxin CnErg1) {Scorpion (C | 83.8 | |
| d1sxma_ | 39 | Noxiustoxin {Mexican scorpion (Centruroides noxius | 83.22 | |
| d2ptaa_ | 35 | Pandinus toxin {Emperor scorpion (Pandinus imperat | 81.44 |
| >d1gpsa_ g.3.7.5 (A:) gamma-Thionin {English wheat (Triticum turgidum) [TaxId: 4571]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: Scorpion toxin-like family: Plant defensins domain: gamma-Thionin species: English wheat (Triticum turgidum) [TaxId: 4571]
Probab=99.79 E-value=7.2e-21 Score=105.14 Aligned_cols=47 Identities=32% Similarity=0.805 Sum_probs=44.4
Q ss_pred ccccccCccceecCCCccccHHHhccccCCCCceeecCCCCcceEeecCC
Q 034823 33 KQCSKRAQKWTGPCIKTGSCRNHCRKREGAVDGACHYDFPGFACFCYYNC 82 (82)
Q Consensus 33 ~~C~~~S~~~~G~C~~~~~C~~~C~~~Eg~~~G~C~~~~~~~~C~C~~~C 82 (82)
++|+++|++|+|+|++++||+++|++ |||++|+|+++ .++|+|++||
T Consensus 1 r~C~s~S~~FkG~C~~~~NCa~vC~~-EgF~gG~C~g~--~RrC~Ctk~C 47 (47)
T d1gpsa_ 1 KICRRRSAGFKGPCMSNKNCAQVCQQ-EGWGGGNCDGP--FRRCKCIRQC 47 (47)
T ss_dssp CEEEEECSSCCSCCCSHHHHHHHHHH-TTCSEEEEETT--TTEEEEEEEC
T ss_pred CcccccCCCCceecCCCccHHHHHhh-CCCCCCccCcc--CeeeeEeCCC
Confidence 57999999999999999999999996 99999999976 6899999998
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| >d1mr4a_ g.3.7.5 (A:) Floral defensin 1 {Common tobacco (Nicotiana tabacum), NAD1 [TaxId: 4097]} | Back information, alignment and structure |
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| >d1n4na_ g.3.7.5 (A:) Floral defensin 1 {Garden petunia (Petunia x hybrida), PHD1 [TaxId: 4102]} | Back information, alignment and structure |
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| >d1ayja_ g.3.7.5 (A:) Antifungal protein 1 (RS-AFP1) {Radish (Raphanus sativus) [TaxId: 3726]} | Back information, alignment and structure |
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| >d1bk8a_ g.3.7.5 (A:) Antimicrobial protein 1 (AH-AMP1) {Horse chestnut (Aesculus hippocastanum) [TaxId: 43364]} | Back information, alignment and structure |
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| >d1jkza_ g.3.7.5 (A:) Defensin 1 (PSD1) {Pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
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| >d1myna_ g.3.7.4 (A:) Drosomycin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1jxca_ g.3.7.5 (A:) Trypsin/chymotrypsin inhibitor ATT {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1kv0a_ g.3.7.1 (A:) Tx10 alpha-like toxin {Chinese scorpion (Buthus martensii) [TaxId: 34649]} | Back information, alignment and structure |
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| >d1fjna_ g.3.7.3 (A:) Defensin MGD-1 {Mediterranean mussel (Mytilus galloprovincialis) [TaxId: 29158]} | Back information, alignment and structure |
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| >d2asca1 g.3.7.1 (A:1-65) alpha toxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]} | Back information, alignment and structure |
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| >d1ahoa_ g.3.7.1 (A:) Scorpion toxin {Scorpion (Androctonus australis hector), Toxin II [TaxId: 70175]} | Back information, alignment and structure |
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| >d1snba_ g.3.7.1 (A:) Scorpion toxin {Scorpion (Buthus martensii), toxin m8 [TaxId: 34649]} | Back information, alignment and structure |
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| >d1dq7a_ g.3.7.1 (A:) Scorpion toxin {Indian red scorpion (Buthus tamulus), neurotoxin [TaxId: 34647]} | Back information, alignment and structure |
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| >d1bmra_ g.3.7.1 (A:) LQH III alpha-like toxin, LQH {Hebraei scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]} | Back information, alignment and structure |
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| >d1nraa_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus, variant V [TaxId: 218467]} | Back information, alignment and structure |
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| >d1nh5a_ g.3.7.1 (A:) Scorpion toxin {Bark scorpion (Centruroides sculpturatus), cse-v5 [TaxId: 218467]} | Back information, alignment and structure |
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| >d1r1ga_ g.3.7.2 (A:) Neurotoxin bmk37 {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]} | Back information, alignment and structure |
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| >d1ozza_ g.3.7.4 (A:) Defensin ARD1 {Archaeoprepona demophon [TaxId: 191427]} | Back information, alignment and structure |
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| >d1icaa_ g.3.7.4 (A:) Defensin A {Flesh fly (Phormia terranovae) [TaxId: 34676]} | Back information, alignment and structure |
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| >d1npia_ g.3.7.1 (A:) Scorpion toxin {Brazilian scorpion (Tityus serrulatus) [TaxId: 6887]} | Back information, alignment and structure |
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| >d1tska_ g.3.7.2 (A:) Toxin ts kappa {Scorpion (Tityus serrulatus) [TaxId: 6887]} | Back information, alignment and structure |
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| >d1pjva_ g.3.7.2 (A:) Cobatoxin 1 {Scorpion (Centruroides noxius) [TaxId: 6878]} | Back information, alignment and structure |
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| >d2sn3a_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus, variant 3 [TaxId: 218467]} | Back information, alignment and structure |
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| >d1t0za_ g.3.7.1 (A:) Scorpion toxin {Scorpion (Buthus martensii), BmK IT-AP [TaxId: 34649]} | Back information, alignment and structure |
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| >d1bcga_ g.3.7.1 (A:) Scorpion toxin {Scorpion (Buthotus judaicus), BJXTR-IT [TaxId: 6863]} | Back information, alignment and structure |
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| >d1cn2a_ g.3.7.1 (A:) Scorpion toxin {Mexican scorpion (Centruroides noxius), toxin II [TaxId: 6878]} | Back information, alignment and structure |
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| >d1m2sa_ g.3.7.2 (A:) Bmtx3 {Buthus martensii karsch [TaxId: 34649]} | Back information, alignment and structure |
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| >d1wmta_ g.3.7.2 (A:) Istx {Scorpion (Opisthacanthus madagascariensis) [TaxId: 167108]} | Back information, alignment and structure |
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| >d2b3ca_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus, beta [TaxId: 218467]} | Back information, alignment and structure |
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| >d1biga_ g.3.7.2 (A:) Bmtx1 {Buthus martensii [TaxId: 34649]} | Back information, alignment and structure |
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| >d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]} | Back information, alignment and structure |
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| >d2crda_ g.3.7.2 (A:) Charybdotoxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]} | Back information, alignment and structure |
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| >d1cmra_ g.3.7.2 (A:) Charybdotoxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]} | Back information, alignment and structure |
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| >d1pe4a_ g.3.7.1 (A:) Scorpion toxin {Mexican scorpion (Centruroides noxius) [TaxId: 6878]} | Back information, alignment and structure |
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| >d1wpda_ g.3.7.2 (A:) Maurotoxin {Scorpion (Scorpio maurus) [TaxId: 53956]} | Back information, alignment and structure |
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| >d1jlza_ g.3.7.2 (A:) alpha-KTX, K+-channel blocker {Scorpion (Tityus cambridgei) [TaxId: 184226]} | Back information, alignment and structure |
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| >d1hp2a_ g.3.7.2 (A:) alpha-KTX, K+-channel blocker {Brazilian scorpion (Tityus serrulatus), Tstx-k alpha [TaxId: 6887]} | Back information, alignment and structure |
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| >d1c55a_ g.3.7.2 (A:) Butantoxin {Brazilian scorpion (Tityus serrulatus) [TaxId: 6887]} | Back information, alignment and structure |
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| >d1px9a_ g.3.7.2 (A:) Ergtoxin (HERG specific toxin CnErg1) {Scorpion (Centruroides noxius) [TaxId: 6878]} | Back information, alignment and structure |
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| >d1sxma_ g.3.7.2 (A:) Noxiustoxin {Mexican scorpion (Centruroides noxius) [TaxId: 6878]} | Back information, alignment and structure |
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| >d2ptaa_ g.3.7.2 (A:) Pandinus toxin {Emperor scorpion (Pandinus imperator), PITX-Ka [TaxId: 55084]} | Back information, alignment and structure |
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