Citrus Sinensis ID: 035566

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA
Secondary Structure (PSIPRED)
cccccEEEEEcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHHHHHHHccccEEEEccccHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHcccEEEEEccccccccccEEcccHHHHHHHHHHHHccccccHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHcccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHHEEEHHHccccccccHHHHHHHHHHHHccccHHHEEEEcccHHHcHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mtkyecllfdvddtlyshsygfsnkcSKNIEEYMIQKLGIEESEVSEFNRVLYKnygtsmaglkavgydfdnddyhsfvhgrlpyenlkpdpvLRNLLLSLPIRKVIFSNADEIHVAKVLRKLgledcfdgivnfeslnptnkttgQELQLISMLRMVAHHFFQrlffddstrniecgksiGLHTVLVgtsrrtkgadYALENIHNIREAFpelwdadeisknikcsenvaietpvta
Flexible Loop (DISEMBL)
MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNfeslnptnkTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKsiglhtvlvgtsRRTKGADYALENIHNIREAFPELWDADEISknikcsenvaietpvta
Low Complexity Region (SEG)
MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA
Disordered region (IsUnstruct)
***YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSEN*********
Disordered Region (DISOPRED)
*TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADE**********VAIETPVT*
Disordered Region (DISEMBL)
MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA
Disordered Region (DISPRO)
*TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q09893	226	Uncharacterized protein C	yes	no	0.525	0.553	0.395	1e-16
P53078	280	Suppressor of disruption	yes	no	0.743	0.632	0.285	1e-11
P40025	321	Phosphate metabolism prot	no	no	0.890	0.660	0.262	9e-08

>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV 66
           + FD+D+ LY  SY   N  +  I  +   KLGI   E      V Y++YG ++ GL  +
Sbjct: 8   IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66

Query: 67  GYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL--PIRKVIFSNADEIHVAKVLRKL 123
            ++ D  DY   V   LP E  +K D VLR +LL L    +  IF+NA  +H  +VL+ L
Sbjct: 67  HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query: 124 GLEDCFDGI 132
           G+EDCFDGI
Sbjct: 127 GIEDCFDGI 135

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 19/196 (9%)

Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   FD+D+ LY  S    +   ++I  +    L +   +    N   YK YG ++ GL 
Sbjct: 56  KVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL- 114

Query: 65  AVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL----PIRKV-IFSNADEIHVAK 118
            + +  +  +Y+  V   LP ++ LKPD  LRN+LL L     I K+ +F+NA + H  +
Sbjct: 115 VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIR 174

Query: 119 VLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS 171
            LR LG+ D FDG+   +          P  K   + ++   + R     +    F DDS
Sbjct: 175 CLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR-----YENAYFIDDS 229

Query: 172 TRNIECGKSIGLHTVL 187
            +NIE G  +G+ T +
Sbjct: 230 GKNIETGIKLGMKTCI 245

Could be an enzyme that inactivates 6-azauracil by modifying it.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 20/232 (8%)

Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   FD+D+TLY  S        +++  +   +LG ++ E        Y+ YG S+ GL 
Sbjct: 53  KVFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLI 112

Query: 65  AVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSLPIRKV-------IFSNADEIHV 116
                 D   Y++F+   LP ++ LKPD  LR LL++L  +K+       +F+N+ + H 
Sbjct: 113 KNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHA 172

Query: 117 AKVLRKLGLEDCFDGIVNFESLNPTNK----TTGQELQLISMLRMVAHHFFQRLFFDDST 172
            + ++ LG+ D FDGI       P  +        +    + L+     F    F DD+ 
Sbjct: 173 IRCVKILGIADLFDGITYCHYDRPIEEEFICKPDPKFFETAKLQSGLSSFANAWFIDDNE 232

Query: 173 RNIECGKSIGLHTVLVGTSRRTKGADYALENI----HNIREAFPELWDADEI 220
            N+    S+G+  V+       +   Y  ENI    H  ++ F  L D  EI
Sbjct: 233 SNVRSALSMGMGHVI----HLIEDYQYESENIVTKDHKNKQQFSILKDILEI 280

May be involved in phosphate metabolism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
297740356	405	unnamed protein product [Vitis vinifera]	0.987	0.580	0.562	2e-82
449440000	254	PREDICTED: uncharacterized protein C24B1	0.987	0.925	0.603	2e-81
225434893	290	PREDICTED: uncharacterized protein C24B1	0.995	0.817	0.557	2e-81
255586170	281	catalytic, putative [Ricinus communis] g	1.0	0.846	0.577	4e-81
297746049	281	unnamed protein product [Vitis vinifera]	0.995	0.843	0.568	6e-81
449455092	282	PREDICTED: uncharacterized protein C24B1	0.966	0.815	0.584	3e-80
449508496	282	PREDICTED: uncharacterized protein C24B1	0.966	0.815	0.584	3e-80
225440392	301	PREDICTED: uncharacterized protein LOC10	0.987	0.780	0.522	6e-80
449508518	283	PREDICTED: uncharacterized protein C24B1	0.978	0.823	0.590	2e-79
224104405	293	predicted protein [Populus trichocarpa]	0.991	0.805	0.55	3e-78

>gi|297740356|emb|CBI30538.3| unnamed protein product [Vitis vinifera]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/265 (56%), Positives = 195/265 (73%), Gaps = 30/265 (11%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY+CLLFD+DDTLY  S G +  C  NIE+YM++KLGIE++++++   +LYKNYGT+MAG
Sbjct: 142 KYDCLLFDLDDTLYPLSSGLAKACRNNIEDYMVEKLGIEKNKIADLGNLLYKNYGTTMAG 201

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           L+A+GYDFD D+YHSFVHGRLPYENLKPDPVLR+LLLSLPIRKVIF+NAD++H AK L +
Sbjct: 202 LRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRSLLLSLPIRKVIFTNADKVHAAKALSR 261

Query: 123 LGLEDCFDGIVNFESLNPTNKTT-----------------------------GQELQLIS 153
           LGLEDCF+G++ FE+LNP++K+T                               E  +  
Sbjct: 262 LGLEDCFEGVICFETLNPSHKSTVSTEIFDIIGHFSQPNAGTALPKTPIVCKPSEAAIER 321

Query: 154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPE 213
            LR+   +  + LFF+DS RNI+ GK +GLHTVLVGTS+R KGAD+ALE+IHN+REA PE
Sbjct: 322 ALRIANINPQRTLFFEDSARNIQSGKRVGLHTVLVGTSQRIKGADFALESIHNMREALPE 381

Query: 214 LWDADEISKNIKCSENVAIETPVTA 238
           LW+ D+ S+ +  +  VA+ETPVTA
Sbjct: 382 LWEGDKKSE-VGYAGQVAVETPVTA 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440000|ref|XP_004137773.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 7/242 (2%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY+CLLFD+DDTLY  S G +  C +NI++YM++KLGIE+S++ +   +LYKNYGT+MAG
Sbjct: 14  KYDCLLFDLDDTLYPLSSGIAASCLQNIKDYMVEKLGIEQSKIPDLCNLLYKNYGTTMAG 73

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           L+A+GYDFD D+YH FVHGRLPY+NLKPDPVLRNLLL+LP RKVIF+NAD+IH  KVL+K
Sbjct: 74  LRAIGYDFDYDEYHKFVHGRLPYDNLKPDPVLRNLLLNLPYRKVIFTNADKIHAVKVLKK 133

Query: 123 LGLEDCFDGIVNFESLNPTNKT------TGQELQLISMLRMVAHHFFQRLFFDDSTRNIE 176
           LGLEDCF GI+ FE+LNPTNKT         E  +   L++   +  + LFF+DS RNI+
Sbjct: 134 LGLEDCFQGIICFETLNPTNKTKTPIICKPSEAAIERALKIAGLNPQRTLFFEDSVRNIQ 193

Query: 177 CGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPV 236
            GK +GL TVL+GTS+R KGADYALE+IHN+RE  PELW+  EI   +  +  V +ET V
Sbjct: 194 AGKRVGLDTVLIGTSQRVKGADYALESIHNLREGIPELWNV-EIKSEMGYAGKVGVETSV 252

Query: 237 TA 238
           TA
Sbjct: 253 TA 254

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434893|ref|XP_002283297.1| PREDICTED: uncharacterized protein C24B11.05-like [Vitis vinifera]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/278 (55%), Positives = 198/278 (71%), Gaps = 41/278 (14%)

Query: 2   TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA 61
           +KY+CLLFD+DDTLY  S G S + +KNI+EYM+QKLGIEE +V E   +LYK+YGT+MA
Sbjct: 13  SKYDCLLFDIDDTLYPLSSGLSAQITKNIQEYMLQKLGIEEDKVPEMCALLYKHYGTTMA 72

Query: 62  GLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLR 121
           GL+A+GY+FD DD+HSFVHGRLPYE LKPDPVLR+LLLSLPIRKV+F+NAD+ H A+VL 
Sbjct: 73  GLRAIGYNFDYDDFHSFVHGRLPYELLKPDPVLRSLLLSLPIRKVVFTNADKGHAARVLN 132

Query: 122 KLGLEDCFDGIVNFESLNPTNKTT------GQEL--------------------QLISML 155
           +LGLEDCF+G++ FE+LNP NK++      G EL                     ++   
Sbjct: 133 RLGLEDCFEGVICFETLNPINKSSVSEAEHGSELGGSGTGSAGICDINHLLSVGSVLPRT 192

Query: 156 RMVAHHFF---------------QRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYA 200
            +V   F                + LFFDDS RN++ GKS+GLHTVLVG+S +TKGADYA
Sbjct: 193 PIVCKPFTDAFEEASKIAKIDPRKTLFFDDSFRNLQGGKSVGLHTVLVGSSHKTKGADYA 252

Query: 201 LENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA 238
           LE+IHNIREA PELW+A+E S+N+  +  +AIETPV A
Sbjct: 253 LESIHNIREALPELWEANEKSENVMHAGEIAIETPVRA 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586170|ref|XP_002533744.1| catalytic, putative [Ricinus communis] gi|223526332|gb|EEF28631.1| catalytic, putative [Ricinus communis]

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 156/270 (57%), Positives = 195/270 (72%), Gaps = 32/270 (11%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           + KY+ LLFDVDDTLY  S GFS + +KNI+EYM+QKLG++E++V+  N+VLY+NYGTSM
Sbjct: 12  VPKYDTLLFDVDDTLYPLSTGFSKEVTKNIQEYMVQKLGMQENKVAALNQVLYRNYGTSM 71

Query: 61  AGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVL 120
           AGLKA+GYDFDNDDYHSFVHGRLPYE LKPD  LR+LLLSLP+R+VIFSNADEIHVAK L
Sbjct: 72  AGLKAIGYDFDNDDYHSFVHGRLPYEKLKPDHFLRSLLLSLPVRRVIFSNADEIHVAKTL 131

Query: 121 RKLGLEDCFDGIVNFESLNPTNKTT----------GQEL-------QLISMLRMVAHHF- 162
            KLGLEDCF+ IV FE++NP +KT+          G E+        ++    +V   F 
Sbjct: 132 SKLGLEDCFESIVCFETINPNHKTSTCNDQSEVKFGSEMLENFEIGSVLPKTPIVCKPFE 191

Query: 163 --FQR------------LFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIR 208
             F++            +FFDDS RNI+ GK +GL TVLVG+S R  GAD+ LE+IHN++
Sbjct: 192 NAFEQAFKLANINPQRTVFFDDSIRNIQTGKRMGLKTVLVGSSNRVSGADHVLESIHNLK 251

Query: 209 EAFPELWDADEISKNIKCSENVAIETPVTA 238
           EA PELW+A E +K  K +  VAIET VTA
Sbjct: 252 EALPELWEATEKTKTRKYAGKVAIETSVTA 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746049|emb|CBI16105.3| unnamed protein product [Vitis vinifera]

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 153/269 (56%), Positives = 194/269 (72%), Gaps = 32/269 (11%)

Query: 2   TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA 61
           +KY+CLLFD+DDTLY  S G S + +KNI+EYM+QKLGIEE +V E   +LYK+YGT+MA
Sbjct: 13  SKYDCLLFDIDDTLYPLSSGLSAQITKNIQEYMLQKLGIEEDKVPEMCALLYKHYGTTMA 72

Query: 62  GLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLR 121
           GL+A+GY+FD DD+HSFVHGRLPYE LKPDPVLR+LLLSLPIRKV+F+NAD+ H A+VL 
Sbjct: 73  GLRAIGYNFDYDDFHSFVHGRLPYELLKPDPVLRSLLLSLPIRKVVFTNADKGHAARVLN 132

Query: 122 KLGLEDCFDGIVNFESLNPTNK--------------------TTGQELQLISMLRMVAHH 161
           +LGLEDCF+G++ FE+LNP NK                    + G  L    ++      
Sbjct: 133 RLGLEDCFEGVICFETLNPINKSSLGGSGTGSAGICDINHLLSVGSVLPRTPIVCKPFTD 192

Query: 162 FFQR------------LFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIRE 209
            F+             LFFDDS RN++ GKS+GLHTVLVG+S +TKGADYALE+IHNIRE
Sbjct: 193 AFEEASKIAKIDPRKTLFFDDSFRNLQGGKSVGLHTVLVGSSHKTKGADYALESIHNIRE 252

Query: 210 AFPELWDADEISKNIKCSENVAIETPVTA 238
           A PELW+A+E S+N+  +  +AIETPV A
Sbjct: 253 ALPELWEANEKSENVMHAGEIAIETPVRA 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455092|ref|XP_004145287.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 156/267 (58%), Positives = 185/267 (69%), Gaps = 37/267 (13%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KYECLLFDVDDTLY  S G S +C+KNIEEYM+++LGIE+  V E N+ LY+NYGTSMAG
Sbjct: 13  KYECLLFDVDDTLYPLSSGLSKQCTKNIEEYMVEELGIEKDGVVEMNQFLYRNYGTSMAG 72

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           LKA+GY+FDND YHS VHGRLPY NLK DPVLRNLLLSLPIRKVIFSNADE+HVAKVL +
Sbjct: 73  LKAIGYEFDNDHYHSLVHGRLPYNNLKRDPVLRNLLLSLPIRKVIFSNADEVHVAKVLSR 132

Query: 123 LGLEDCFDGIVNFESLNPTN-----------------------------------KTTGQ 147
           LGLE CF+ I+ FESLN +N                                   K + Q
Sbjct: 133 LGLEGCFESIICFESLNSSNFDTSSDDGSESDSKTSTNSDIDDTPPPLPVTPVLCKPSPQ 192

Query: 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNI 207
             +  S L++      + LFFDDS RNI+ GKS GL TVLVG+S+R  G DYALE+IHNI
Sbjct: 193 AFE--SALKIANIDPKKTLFFDDSIRNIKTGKSSGLRTVLVGSSKRGNGIDYALESIHNI 250

Query: 208 REAFPELWDADEISKNIKCSENVAIET 234
           REA PELW+ DE  KN + S N+A++T
Sbjct: 251 REALPELWEVDEKMKNQRLSSNIALDT 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449508496|ref|XP_004163328.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 156/267 (58%), Positives = 185/267 (69%), Gaps = 37/267 (13%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KYECLLFDVDDTLY  S G S +C+KNIEEYM+++LGIE+  V E N+ LY+NYGTSMAG
Sbjct: 13  KYECLLFDVDDTLYPLSSGLSKQCTKNIEEYMVEELGIEKDGVVEMNQFLYRNYGTSMAG 72

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           LKA+GY+FDND YHS VHGRLPY NLK DPVLRNLLLSLPIRKVIFSNADE+HVAKVL +
Sbjct: 73  LKAIGYEFDNDHYHSLVHGRLPYNNLKRDPVLRNLLLSLPIRKVIFSNADEVHVAKVLSR 132

Query: 123 LGLEDCFDGIVNFESLNPTN-----------------------------------KTTGQ 147
           LGLE CF+ I+ FESLN +N                                   K + Q
Sbjct: 133 LGLEGCFESIICFESLNSSNFDTSSDDGSESDSKTSTNSDIDDTPPPLPVTPVLCKPSPQ 192

Query: 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNI 207
             +  S L++      + LFFDDS RNI+ GKS GL TVLVG+S+R  G DYALE+IHNI
Sbjct: 193 AFE--SALKIANVDPKRTLFFDDSIRNIKTGKSSGLRTVLVGSSKRGNGIDYALESIHNI 250

Query: 208 REAFPELWDADEISKNIKCSENVAIET 234
           REA PELW+ DE  KN + S N+A++T
Sbjct: 251 REALPELWEVDEKMKNQRLSSNIALDT 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440392|ref|XP_002267559.1| PREDICTED: uncharacterized protein LOC100232886 [Vitis vinifera] gi|7406669|emb|CAB85628.1| putative ripening-related protein [Vitis vinifera]

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 151/289 (52%), Positives = 198/289 (68%), Gaps = 54/289 (18%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY+CLLFD+DDTLY  S G +  C  NIE+YM++KLGIE++++++   +LYKNYGT+MAG
Sbjct: 14  KYDCLLFDLDDTLYPLSSGLAKACRNNIEDYMVEKLGIEKNKIADLGNLLYKNYGTTMAG 73

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           L+A+GYDFD D+YHSFVHGRLPYENLKPDPVLR+LLLSLPIRKVIF+NAD++H AK L +
Sbjct: 74  LRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRSLLLSLPIRKVIFTNADKVHAAKALSR 133

Query: 123 LGLEDCFDGIVNFESLNPTNKTT-GQELQLISMLRM------------------VAHHFF 163
           LGLEDCF+G++ FE+LNP++K+T   +   I+ +R+                  +  HF 
Sbjct: 134 LGLEDCFEGVICFETLNPSHKSTVSDDEDDIAFVRLTANTATATTTTSSTEIFDIIGHFS 193

Query: 164 Q----------------------------------RLFFDDSTRNIECGKSIGLHTVLVG 189
           Q                                   LFF+DS RNI+ GK +GLHTVLVG
Sbjct: 194 QPNAGTALPKTPIVCKPSEAAIERALRIANINPQRTLFFEDSARNIQSGKRVGLHTVLVG 253

Query: 190 TSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA 238
           TS+R KGAD+ALE+IHN+REA PELW+ D+ S+ +  +  VA+ETPVTA
Sbjct: 254 TSQRIKGADFALESIHNMREALPELWEGDKKSE-VGYAGQVAVETPVTA 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449508518|ref|XP_004163334.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/266 (59%), Positives = 186/266 (69%), Gaps = 33/266 (12%)

Query: 2   TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA 61
           +KYECLLFDVDDTLY  S G S +C+ NIEEYM+++LGIE+  V E N+ LY+NYGTSMA
Sbjct: 13  SKYECLLFDVDDTLYPLSSGLSKQCTINIEEYMVEELGIEKDRVVEMNQFLYRNYGTSMA 72

Query: 62  GLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLR 121
           GLKAVGY+FDND YHSFVHGRLPY NLK D VLRN+LLSLPIRKVIFSNADE+HVAKVL 
Sbjct: 73  GLKAVGYEFDNDHYHSFVHGRLPYNNLKCDMVLRNILLSLPIRKVIFSNADEVHVAKVLS 132

Query: 122 KLGLEDCFDGIVNFESLNPTNKTT----GQE-----------------LQLISMLRMVAH 160
           +LGLE CF+ I+ FESLN +N  T    G E                 L +  +L   + 
Sbjct: 133 RLGLEGCFESIICFESLNSSNLDTSSNDGSESDSKTSTNSDTDDTPPPLSITPVLCKPSP 192

Query: 161 HFFQR------------LFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIR 208
             F+             LFFDDS RNI+ GKS GL TVLVG+S+R  G DYALE+IHNIR
Sbjct: 193 QAFESALKIANIDPKKTLFFDDSIRNIKTGKSSGLRTVLVGSSKRGNGIDYALESIHNIR 252

Query: 209 EAFPELWDADEISKNIKCSENVAIET 234
           EA PELW+ DE  KN + S N+A++T
Sbjct: 253 EALPELWEVDEKMKNQRLSSNIALDT 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104405|ref|XP_002313427.1| predicted protein [Populus trichocarpa] gi|222849835|gb|EEE87382.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/280 (55%), Positives = 188/280 (67%), Gaps = 44/280 (15%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY+CLLFDVDDTLY  S G   + +KNI+EYMIQKLGIEE+E S+ N VLYK+YGTSMAG
Sbjct: 14  KYDCLLFDVDDTLYPRSSGLLEEVTKNIQEYMIQKLGIEETEASQMNGVLYKSYGTSMAG 73

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           LKA+GYDFDNDDYH FVHGRLPYE L+PD VLRNLLLSLPIRKVIFSNAD+ HVAKVL +
Sbjct: 74  LKAIGYDFDNDDYHRFVHGRLPYERLRPDHVLRNLLLSLPIRKVIFSNADQAHVAKVLSR 133

Query: 123 LGLEDCFDGIVNFESLNPTN-----------------KTTGQELQLI------------- 152
           LGLEDCF+G++ FE+LNP N                  +  Q L +I             
Sbjct: 134 LGLEDCFEGVICFETLNPFNYEDINACDGTGAWSPSYASKSQILDIIEHPCQSNPVSALP 193

Query: 153 --------------SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGAD 198
                            ++   +  + +FFDDS RNI  GK +GLHTVLVGT+ RT GAD
Sbjct: 194 KSPVVCKPFEDAFEQAFKLANINPQKTVFFDDSVRNIMTGKLMGLHTVLVGTANRTNGAD 253

Query: 199 YALENIHNIREAFPELWDADEISKNIKCSENVAIETPVTA 238
           YALE+IHN++EA  +LW A++ S+    +  V++ET VTA
Sbjct: 254 YALESIHNMKEALSDLWKANDKSEARSFTRKVSMETTVTA 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2148358	266	AT5G59490 [Arabidopsis thalian	0.579	0.518	0.702	8.5e-75
TAIR|locus:2148343	282	AT5G59480 [Arabidopsis thalian	0.596	0.503	0.669	9.7e-74
TAIR|locus:2185223	280	AT5G02230 [Arabidopsis thalian	0.575	0.489	0.664	2e-73
TAIR|locus:2079522	249	AT3G62040 [Arabidopsis thalian	0.987	0.943	0.528	1.6e-63
TAIR|locus:2045422	263	AT2G32150 [Arabidopsis thalian	0.882	0.798	0.454	8.5e-49
DICTYBASE|DDB_G0293862	249	DDB_G0293862 "haloacid dehalog	0.890	0.851	0.354	3.9e-28
POMBASE|SPAC24B11.05	226	SPAC24B11.05 "pyrimidine 5'-nu	0.890	0.938	0.315	4e-19
UNIPROTKB|G4MVR5	238	MGG_01783 "Uncharacterized pro	0.865	0.865	0.287	2e-17
SGD|S000003192	280	SDT1 "Pyrimidine nucleotidase"	0.747	0.635	0.288	1.8e-14
TIGR_CMR|SPO_1374	214	SPO_1374 "pyrimidine 5'-nucleo	0.743	0.827	0.254	1.3e-13

TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)]

 Score = 551 (199.0 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
 Identities = 97/138 (70%), Positives = 119/138 (86%)

Query:     3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
             +YECLLFD+DDTLY  S G S+ CS NI EYM++KLGI+E  V E N++LYK YGTSMAG
Sbjct:    10 RYECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAG 69

Query:    63 LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
             LKAVGY+FDND+YH +VHGRLPYENLKPDPVLR+LLL LP+RK++FSN DE+HV K L +
Sbjct:    70 LKAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTR 129

Query:   123 LGLEDCFDGIVNFESLNP 140
             LG+EDCF+ I++FE+LNP
Sbjct:   130 LGIEDCFERIISFETLNP 147

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
 Identities = 95/142 (66%), Positives = 117/142 (82%)

Query:     3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
             KY+CLLFD+DDTLY  S G + +  KNI+EYM+QKLGIEE +V E    LYK YGT+MAG
Sbjct:    14 KYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELCLSLYKIYGTTMAG 73

Query:    63 LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
             LKAVGYDFD DD+H FVHGRLPY  LKPDP+LRN++LSLPIRKV+F+NAD+ H AK++ +
Sbjct:    74 LKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFTNADKAHAAKIIAR 133

Query:   123 LGLEDCFDGIVNFESLNPTNKT 144
             LGLE CF+ I++FE+LNP  KT
Sbjct:   134 LGLEGCFEKIISFETLNPITKT 155

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
 Identities = 91/137 (66%), Positives = 118/137 (86%)

Query:     3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
             KY+CLLFD+DDTLY  S G + +C  NI++YM +KLGI + ++ E + +LYKNYGT+MAG
Sbjct:    14 KYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAG 73

Query:    63 LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
             L+A+GY+FD D+YHSFVHGRLPY+N+KPD VLR+LLLSLP+RKVIF+NAD +H AK L+K
Sbjct:    74 LRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKK 133

Query:   123 LGLEDCFDGIVNFESLN 139
             LGLEDCF+GI+ FE+LN
Sbjct:   134 LGLEDCFEGIICFETLN 150

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 128/242 (52%), Positives = 166/242 (68%)

Query:     4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL 63
             YECL FD+DDTLY  S G +  C  NI+E+M+ +LGIEESEV +    LYK YGT+MAGL
Sbjct:     8 YECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMAGL 67

Query:    64 KAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKL 123
             K +GY+FDND++H +VHGRLPYE LKPDP+LRNLLLS+P RK+IF+NAD+ H  + L +L
Sbjct:    68 KVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALNRL 127

Query:   124 GLEDCFDGIVNFESLNPTNKTTGQEL-----QLISMLRMVAHHFFQR--LFFDDSTRNIE 176
             GLEDCF+GI+ FE+LNP++ +  Q L     +       +A     R  +FFDDS RNI 
Sbjct:   128 GLEDCFEGIICFETLNPSSDSNTQILCKPSVEAFEAAIRIADIVDPRKTIFFDDSIRNIA 187

Query:   177 CGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIETPV 236
               K+ GL TV VG S    GADYAL +IHNI+EA P+LW+ ++  K     +  A+ T V
Sbjct:   188 SAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWEDNKDEKLEPIVQQAAVATMV 247

Query:   237 TA 238
              A
Sbjct:   248 NA 249

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 101/222 (45%), Positives = 149/222 (67%)

Query:     6 CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA 65
             CL+FD+DDTLY    G +    KNI++++++K G  ES+ S     L+K YG+++AGL+A
Sbjct:     8 CLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGSTLAGLRA 67

Query:    66 VGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGL 125
             +G+D   D+YHSFVHGRLPY +++P+  LRNLL  +  RK+IF+N+D+ H  KVL+KLGL
Sbjct:    68 LGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVKVLKKLGL 127

Query:   126 EDCFDGIVNFESLNPT---NKTTGQELQLI---SMLRM-----VAHHFFQR-LFFDDSTR 173
             EDCF+ ++ FE++NP    + T   E  ++   S+  M     VA+   +R +F DD+  
Sbjct:   128 EDCFEEMICFETMNPNLFGSTTRPDEYPVVLKPSLTAMDICIRVANVDPRRTVFLDDNIH 187

Query:   174 NIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELW 215
             NI  GKS+GL T+LVG + +TK ADYA+E +  I  A PE+W
Sbjct:   188 NITAGKSVGLRTILVGRAEKTKDADYAVETVTEIATAVPEIW 229

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 77/217 (35%), Positives = 115/217 (52%)

Query:     3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
             K   LLFD+D+TLY  S G + + S  I +YM   L +   EV +     YK YG ++ G
Sbjct:    20 KIHTLLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKG 79

Query:    63 LKAVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKV 119
             L  + ++ + D Y  +VHG L  ++ LKPD  L   L S+   ++KVIFSNAD  H  +V
Sbjct:    80 LM-MNHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRV 138

Query:   120 LRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGK 179
              R+L ++DCFD  +++  +   +K      Q+ +M +         +FFDD   N+   K
Sbjct:   139 TRELEIDDCFDAWLDYLEMMDFSKPHPVAYQM-AMKKADTTDASGCVFFDDVVENLVEAK 197

Query:   180 SIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWD 216
               G++TVLVG +      DY ++ IH     FPEL D
Sbjct:   198 KAGMYTVLVGATSNDPHVDYCIDEIHEFVNIFPELID 234

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 71/225 (31%), Positives = 111/225 (49%)

Query:     1 MT-KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTS 59
             MT + + + FD+D+ LY  SY   N  +  I  +   KLGI   E      V Y++YG +
Sbjct:     1 MTVEQKIIFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIA 60

Query:    60 MAGLKAVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSLPIR-KV-IFSNADEIHV 116
             + GL  + ++ D  DY   V   LP E  +K D VLR +LL L  + K  IF+NA  +H 
Sbjct:    61 IRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHA 119

Query:   117 AKVLRKLGLEDCFDGIV--NFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN 174
              +VL+ LG+EDCFDGI   ++ + +   K   +  + +     V     + +F DDS  N
Sbjct:   120 NRVLKYLGIEDCFDGITYCDYNAKDLIAKPMPEMYERVMREAGVTDKD-KCIFVDDSYGN 178

Query:   175 IECGKSIGL-HTV-LV--GTSR-RTKGADYALENIHNIREAFPEL 214
             I   +  G  +TV LV  G    + +   + + +IH  +    E+
Sbjct:   179 ILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIRDIHKFKHLLDEI 223

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISO

GO:0008252 "nucleotidase activity" evidence=ISO

GO:0047405 "pyrimidine-5'-nucleotide nucleosidase activity" evidence=NAS

UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 62/216 (28%), Positives = 105/216 (48%)

Query:     9 FDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGY 68
             FD+D+ LY  S    ++ +  I++Y  + L +   E    ++  Y+NYG ++ GL    +
Sbjct:    21 FDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEGLVR-HH 79

Query:    69 DFDNDDYHSFVHGRLPYENL-KPDPVLRNLLLSLPIRKV---IFSNADEIHVAKVLRKLG 124
               D  +Y+S V   LP E + KP+P LR +L  +   KV   +F+NA   H  +V+R L 
Sbjct:    80 QIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARRVVRLLE 139

Query:   125 LEDCFDGIVNFE-SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGL 183
             +ED FDGI   + +  P      ++    +M      +     F DD+ +N      IG 
Sbjct:   140 IEDLFDGITYCDYAAQPLVCKPHEDAFANAMRDAGVENVDDCYFVDDNYQNCRKANEIGW 199

Query:   184 HTV-LV--GTS-RRTKGADYALENIHNIREAFPELW 215
             HT  LV  G    RT  + + + ++  +R  FP+++
Sbjct:   200 HTAHLVEEGVKVPRTPASKHQIRSLEELRNVFPDVF 235

GO:0005575 "cellular_component" evidence=ND

SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 54/187 (28%), Positives = 88/187 (47%)

Query:     9 FDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGY 68
             FD+D+ LY  S    +   ++I  +    L +   +    N   YK YG ++ GL  + +
Sbjct:    60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118

Query:    69 DFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL----PIRKV-IFSNADEIHVAKVLRK 122
               +  +Y+  V   LP ++ LKPD  LRN+LL L     I K+ +F+NA + H  + LR 
Sbjct:   119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178

Query:   123 LGLEDCFDGIVNFESLNPTNKTTGQELQLI--SMLRMVAHHFFQRLFFDDSTRNIECGKS 180
             LG+ D FDG+   +            ++    +M       +    F DDS +NIE G  
Sbjct:   179 LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIK 238

Query:   181 IGLHTVL 187
             +G+ T +
Sbjct:   239 LGMKTCI 245

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008252 "nucleotidase activity" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IMP

TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 46/181 (25%), Positives = 83/181 (45%)

Query:     8 LFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVG 67
             +FD+D+TLY  +    ++    +  Y+++ LG+  +E        ++ YGT++AGL    
Sbjct:    13 VFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQYGTTLAGLMRE- 71

Query:    68 YDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLED 127
             +  D D Y   VH  +   ++ PD  L + + +LP R+++++N    +  +VL   GL  
Sbjct:    72 HGLDPDPYLVAVH-EVDMSHMTPDTALASHIRALPGRRIVYTNGSAPYAERVLAARGLTG 130

Query:   128 CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVL 187
              FD I   E      K      + +     V     +   F+D  RN+     +G+ TV 
Sbjct:   131 LFDAIYGVEHAGYRPKPERAAFEEVFTRDGVIPE--RAAMFEDDPRNLTAPHEMGMRTVH 188

Query:   188 V 188
             V
Sbjct:   189 V 189

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISS

GO:0008253 "5'-nucleotidase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.68	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	3e-66
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	4e-21
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	1e-17
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	8e-11
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	6e-06
pfam12689	164	pfam12689, Acid_PPase, Acid Phosphatase	4e-04
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	6e-04
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	0.003

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score =  202 bits (516), Expect = 3e-66
 Identities = 83/184 (45%), Positives = 113/184 (61%), Gaps = 1/184 (0%)

Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   FD+D+TLY HS G   +  +NI E++  +L +   E     +  YK YGT++AGL 
Sbjct: 1   DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLM 60

Query: 65  AVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLG 124
            + ++ D D+Y  +VHGRLPY+ LKPDP LRNLLL LP RK+IF+N D  H  + LR+LG
Sbjct: 61  IL-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLG 119

Query: 125 LEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLH 184
           +EDCFDGI  F++ NP              LR       + +FFDDS RNI  GK++G+ 
Sbjct: 120 IEDCFDGIFCFDTANPDLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMK 179

Query: 185 TVLV 188
           TVLV
Sbjct: 180 TVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 86.7 bits (215), Expect = 4e-21
 Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 18/189 (9%)

Query: 6   CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK-NYGTSMAGLK 64
            +LFD+D  L   ++  +    +     +  +LG+ E    E     +K  YG +M+   
Sbjct: 1   AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60

Query: 65  AVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLR 121
           A         Y +        E LKP P +R LL +L     +  + +N+       VL 
Sbjct: 61  AQLLYK-QLFYEALEK-----EGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE 114

Query: 122 KLGLEDCFDGIVNFESLNPTNKTTGQE--LQLISMLRMVAHHFFQRLFFDDSTRNIECGK 179
            LGL   FD ++  +S +        +  LQ +  L +        LF DDS   I+  K
Sbjct: 115 -LGLRALFDVVI--DSSDVGLGKPDPDIYLQALKKLGLKPSEC---LFVDDSPAGIDAAK 168

Query: 180 SIGLHTVLV 188
           + G+HTVLV
Sbjct: 169 AAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 77.0 bits (190), Expect = 1e-17
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 14/186 (7%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV 66
           ++FD+D TL      F     + + +   ++LG++ S   E        +  ++A L   
Sbjct: 1   IIFDLDGTLID----FDPVIFEALRDLAAERLGLDISA-EELREAGGLPFDEALADLLRE 55

Query: 67  GYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKL 123
            +  D D+    +        L+P P +  LL  L    ++ VI SN     V ++L KL
Sbjct: 56  -HPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114

Query: 124 GLEDCFDGIVNFESLNPTNKTTGQELQ-LISMLRMVAHHFFQRLFFDDSTRNIECGKSIG 182
           GL D FD +   + +    K   +  + ++  L +        LF DDS  ++E  ++ G
Sbjct: 115 GLLDLFDAVFTSDDVG-ARKPDPEAYERVLERLGLPPEEI---LFIDDSPEDLEAARAAG 170

Query: 183 LHTVLV 188
           + TV V
Sbjct: 171 IKTVHV 176

Length = 176

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 59.5 bits (144), Expect = 8e-11
 Identities = 48/236 (20%), Positives = 76/236 (32%), Gaps = 32/236 (13%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEY----MIQKLG----IEESEVSEFNRVL 52
           M   + +LFD+D TL                E      +++L     IE+ E        
Sbjct: 1   MMMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEY 60

Query: 53  YKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP-YENLKPDPVLRNLLLSLPIRK---VIF 108
              YG ++  L  +      D+    V   L     L PD       L    +K    I 
Sbjct: 61  TGEYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGIL 120

Query: 109 SNADEIHVAKVLRKLGLEDCFDGIVNFESLN---PTNKTTGQELQLISMLRMVAHHFFQR 165
           +N    H  + LR+LGL D FD +   E +    P  +          +           
Sbjct: 121 TNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPE----------IFEYALEKLGVP 170

Query: 166 ----LFFDDSTRNIECG-KSIGLHTVLVGTSRRTK--GADYALENIHNIREAFPEL 214
               LF  DS  N   G +++G+ TV +    +      +     I ++ E    L
Sbjct: 171 PEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226

Length = 229

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 1   MTKYECLLFDVDDTL--YSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRV------- 51
           M   + +LFD+D TL   +     +           + +LG+   +  E  ++       
Sbjct: 1   MMMIKAILFDLDGTLVDSAEDILRAF-------NAALAELGLPPLDEEEIRQLIGLGLDE 53

Query: 52  ----LYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVI 107
               L        A         +    ++ +     +  +K   +L   L S   +  I
Sbjct: 54  LIERLLGEADEEAAAELVERLREEFLTAYAELLESRLFPGVKE--LLA-ALKSAGYKLGI 110

Query: 108 FSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLF 167
            +N  E  +  +L+ LGL D FD IV  + + P  K   + L L+  L  +     + L 
Sbjct: 111 VTNKPERELDILLKALGLADYFDVIVGGDDV-PPPKPDPEPLLLL--LEKLGLDPEEALM 167

Query: 168 FDDSTRNIECGKSIGLHTVLV------GTSRRTKGADYALENIHNIREAFPE 213
             DS  +I   K+ G+  V V             GAD  ++++  +     E
Sbjct: 168 VGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLAE 219

Length = 220

>gnl|CDD|221713 pfam12689, Acid_PPase, Acid Phosphatase

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 29/105 (27%)

Query: 98  LLSLPIRKVIFSNADEIHVAK-VLRKLGLEDCFDGIVNFESLN--PTNKTTGQELQLISM 154
           L    I   + S  D    A+ +L+ L + D    I  F+ L   P +KTT         
Sbjct: 56  LKEKGITIAVASRTDAPDWARELLKLLHINDGPPAIDYFDYLEIYPGSKTT--------- 106

Query: 155 LRMVAHHF--FQR---------LFFDDSTRNIECGKSIGLHTVLV 188
                 HF    +         LFFDD +RNI+    +G+  VLV
Sbjct: 107 ------HFKKIHKKSGVPYSDMLFFDDESRNIDVVSRLGVTFVLV 145

This family contains phosphatase enzymes and other proteins of the HAD superfamily. It includes MDP-1 which is a eukaryotic magnesium-dependent acid phosphatase. Length = 164

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 8   LFDVDDTLYSHSYGFSNKCSKNIEEYMI-QKLGIEESEV-SEFNRVLYKNYGTSMAG--- 62
            FD+DDTL   S G + K  +N  E +I   L ++  E   E  + L K YG++      
Sbjct: 6   FFDLDDTLIDTS-GLAEKARRNAIEVLIEAGLNVDFEEAYEELLK-LIKEYGSNYPTHFD 63

Query: 63  --LKAVGYDFDNDDYHSFV--HGRLPYENLKPDPVLRNLLLSL---PIRKVIFSNADEIH 115
             ++ +  +++     +FV  + +L +  L+  P +R+ L+ L     R  I ++   + 
Sbjct: 64  YLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVK 123

Query: 116 VAKVLRKLGLEDCFDGIV 133
             + L +LG+ D FD ++
Sbjct: 124 QWEKLERLGVRDFFDAVI 141

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 13/96 (13%)

Query: 106 VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ-------------LI 152
            + +N     V ++L +LGL+D FD ++            G  L              L+
Sbjct: 44  ALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLL 103

Query: 153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV 188
           + L+++     + L   DS  +IE  K+ G   V V
Sbjct: 104 AALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	100.0
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.97
COG0546	220	Gph Predicted phosphatases [General function predi	99.96
PRK13288	214	pyrophosphatase PpaX; Provisional	99.96
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.96
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.95
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.95
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.95
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.95
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.95
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.95
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.95
PRK11587	218	putative phosphatase; Provisional	99.94
PLN02575	381	haloacid dehalogenase-like hydrolase	99.94
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.94
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.94
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.94
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.94
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.94
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.94
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.93
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.93
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.93
PRK09449	224	dUMP phosphatase; Provisional	99.93
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.93
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.92
PLN02940	382	riboflavin kinase	99.92
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.92
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.91
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.91
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.9
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.9
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.89
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.89
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.89
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.88
PHA02597	197	30.2 hypothetical protein; Provisional	99.88
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.87
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.87
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.86
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.84
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.83
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.82
PRK06769	173	hypothetical protein; Validated	99.82
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.82
PLN02811	220	hydrolase	99.81
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.81
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.81
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.81
PLN02954	224	phosphoserine phosphatase	99.79
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.79
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.78
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.78
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.77
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.76
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.76
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.74
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.74
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.74
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.73
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.71
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.69
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.69
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.69
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.66
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.66
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.65
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.64
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.64
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.64
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.63
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.63
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.61
PLN02645	311	phosphoglycolate phosphatase	99.61
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.58
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.57
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.56
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.55
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.55
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.54
PRK10513	270	sugar phosphate phosphatase; Provisional	99.54
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.53
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.52
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.52
PLN02887	580	hydrolase family protein	99.52
PRK10976	266	putative hydrolase; Provisional	99.52
PRK11590	211	hypothetical protein; Provisional	99.48
PRK10444	248	UMP phosphatase; Provisional	99.47
PHA02530	300	pseT polynucleotide kinase; Provisional	99.47
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.47
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.47
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.46
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.44
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.43
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.41
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.4
PRK08238	479	hypothetical protein; Validated	99.38
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.35
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.35
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.34
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.34
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.32
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.32
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.3
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.29
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.28
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.26
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.26
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.24
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.24
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.23
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.18
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.18
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.16
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.14
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.11
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.09
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.09
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.08
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.06
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	99.03
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.02
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	98.99
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.96
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.96
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.95
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.95
PTZ00445	219	p36-lilke protein; Provisional	98.88
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.85
COG4359	220	Uncharacterized conserved protein [Function unknow	98.77
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.75
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.73
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.72
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.71
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.71
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.7
PLN02382	413	probable sucrose-phosphatase	98.63
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.62
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.62
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.61
PTZ00174	247	phosphomannomutase; Provisional	98.61
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.58
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.56
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.55
PLN02423	245	phosphomannomutase	98.55
COG4087	152	Soluble P-type ATPase [General function prediction	98.53
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.48
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.47
COG4996	164	Predicted phosphatase [General function prediction	98.46
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.46
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.42
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.37
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.34
PRK10671	834	copA copper exporting ATPase; Provisional	98.31
PLN02177	497	glycerol-3-phosphate acyltransferase	98.28
COG5663	194	Uncharacterized conserved protein [Function unknow	98.28
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.17
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.1
PLN03017	366	trehalose-phosphatase	98.05
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.0
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.99
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.97
COG4030	315	Uncharacterized protein conserved in archaea [Func	97.97
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.79
COG3700	237	AphA Acid phosphatase (class B) [General function	97.77
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.75
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.73
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.68
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.65
COG2503	274	Predicted secreted acid phosphatase [General funct	97.64
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	97.62
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.55
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.51
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.43
PRK15122	903	magnesium-transporting ATPase; Provisional	97.4
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.39
PLN02580	384	trehalose-phosphatase	97.32
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	97.31
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.24
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	97.19
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	97.15
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.05
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.02
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.02
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.01
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	96.92
PLN02645	311	phosphoglycolate phosphatase	96.77
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	96.73
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.67
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.66
PLN02499	498	glycerol-3-phosphate acyltransferase	96.44
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	96.11
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	95.95
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	95.91
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	95.88
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	95.77
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	95.13
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	95.09
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	94.99
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	94.69
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	94.58
PLN02151	354	trehalose-phosphatase	94.4
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	94.37
PLN03190	1178	aminophospholipid translocase; Provisional	94.15
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	93.69
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	93.16
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	93.15
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	91.96
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	91.7
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	91.64
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	90.29
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	90.18
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	89.1
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	88.39
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	87.5
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	87.32
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	86.83
PLN02151	354	trehalose-phosphatase	86.83
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	84.41
PLN02580	384	trehalose-phosphatase	82.2
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	81.73
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	81.26
PRK10444	248	UMP phosphatase; Provisional	80.09

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=100.00  E-value=1.6e-33  Score=200.84  Aligned_cols=217  Identities=54%  Similarity=0.941  Sum_probs=199.2

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCC
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGR   82 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (238)
                      ++++++||+|.||++.+..+....++.|.+|+..++|++.+.+.+++..+++.||.++.++...++..+..+|.+++++.
T Consensus        14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~   93 (244)
T KOG3109|consen   14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR   93 (244)
T ss_pred             cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence            47999999999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             CCCCCCCCChhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCC--CCCCchHHHHHH-HHhc
Q 035566           83 LPYENLKPDPVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTN--KTTGQELQLISM-LRMV  158 (238)
Q Consensus        83 ~~~~~~~~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k--~~~~~~~~~~~~-~~~~  158 (238)
                      ++++.++|.+.++.+|-.++.+ +++.||++..++.++++.+|+.++|+.+++++.....+  -.-||....++. .+..
T Consensus        94 LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~a  173 (244)
T KOG3109|consen   94 LPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVA  173 (244)
T ss_pred             CcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHh
Confidence            9999999999999999999988 89999999999999999999999999999988665311  111347777775 7889


Q ss_pred             CCC-CCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhccc
Q 035566          159 AHH-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADE  219 (238)
Q Consensus       159 ~~~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~~  219 (238)
                      |++ |++++||+||.++|+.|++.||++++++.......+++++.+..+..+.++.+|+..+
T Consensus       174 gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~  235 (244)
T KOG3109|consen  174 GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE  235 (244)
T ss_pred             CCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence            997 9999999999999999999999999999988888999999999999999999999876

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.97  E-value=9.1e-29  Score=182.12  Aligned_cols=183  Identities=45%  Similarity=0.801  Sum_probs=146.6

Q ss_pred             eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCC
Q 035566            5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP   84 (238)
Q Consensus         5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (238)
                      ++|+||+||||+|+.+.+...+.+.+.++...++|++......+...++..+|....++... ...+.+.+...+.....
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP   79 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence            47999999999998788888888877777777889987776666666666666555554432 34455666666655433


Q ss_pred             CCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           85 YENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        85 ~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      ...++++||+.++|+.|+.+.+++||++...+...++.+|+..+|+.++++++.+...+..||.+.++.. ++++|++|+
T Consensus        80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            3467899999999999998889999999999999999999999999999998877642222347777775 899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEe
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      ++++|||+..|+.+|+++|+++|+|
T Consensus       160 ~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       160 RAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             ceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            9999999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.96  E-value=8.6e-29  Score=186.77  Aligned_cols=200  Identities=22%  Similarity=0.269  Sum_probs=145.3

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--cCC------CCh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--GYD------FDN   72 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~   72 (238)
                      ||+++.|+||+||||+|+...+..+++     ..++.+|.+......+...    .|.........  +..      ...
T Consensus         1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----ig~~~~~~~~~~~~~~~~~~~~~~~   71 (220)
T COG0546           1 MMMIKAILFDLDGTLVDSAEDILRAFN-----AALAELGLPPLDEEEIRQL----IGLGLDELIERLLGEADEEAAAELV   71 (220)
T ss_pred             CCCCCEEEEeCCCccccChHHHHHHHH-----HHHHHcCCCCCCHHHHHHH----hcCCHHHHHHHHhccccchhHHHHH
Confidence            678999999999999998777777765     3677788875433332221    22222211110  000      011


Q ss_pred             HhHHHhhhCCCCCC-CCCCChhHHHHHhcCCCCe---EEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch
Q 035566           73 DDYHSFVHGRLPYE-NLKPDPVLRNLLLSLPIRK---VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE  148 (238)
Q Consensus        73 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~---~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~  148 (238)
                      +.+.+.+....... ...++||+.++|..++.++   +|+||.+...++.+++++|+..+|+.+++.++....||   .+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP---~P  148 (220)
T COG0546          72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKP---DP  148 (220)
T ss_pred             HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCc---CH
Confidence            22222222111111 2578999999999998764   79999999999999999999999999999666777766   33


Q ss_pred             HHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhH
Q 035566          149 LQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFP  212 (238)
Q Consensus       149 ~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~  212 (238)
                      ..+...++++|++|++++||||+.+|+.+|+++|++++++.++..      ...+|+++.++.||...+.
T Consensus       149 ~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~  218 (220)
T COG0546         149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA  218 (220)
T ss_pred             HHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence            444456999999988999999999999999999999999988752      5569999999999988764

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.96  E-value=2.6e-28  Score=183.87  Aligned_cols=197  Identities=17%  Similarity=0.220  Sum_probs=140.5

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHh----HHHh
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDD----YHSF   78 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   78 (238)
                      ++++|+||+||||+|+...+..++.+     ++++++.......+    +...+|.+.......-.....+.    +...
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRED----VLPFIGPSLHDTFSKIDESKVEEMITTYREF   72 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCcCHHHHHHhcCHHHHHHHHHHHHHH
Confidence            58999999999999976655555554     44445443211111    22233544333222101111112    2221


Q ss_pred             hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-H
Q 035566           79 VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-M  154 (238)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~  154 (238)
                      ... .......++||+.++|+.|+.+   .+|+||+....+...++.+|+..+|+.+++++.....||    ++..+. +
T Consensus        73 ~~~-~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp----~p~~~~~~  147 (214)
T PRK13288         73 NHE-HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKP----DPEPVLKA  147 (214)
T ss_pred             HHH-hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCC----CcHHHHHH
Confidence            211 1123467899999999998754   579999999999999999999999999999888777776    555555 5


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~  213 (238)
                      +++++++|+++++|||+.+|+++|+++|++++++.++..      ...++++++++.++.+++.+
T Consensus       148 ~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~  212 (214)
T PRK13288        148 LELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD  212 (214)
T ss_pred             HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence            899999999999999999999999999999999988742      34689999999999887654

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.96  E-value=1.1e-27  Score=186.21  Aligned_cols=206  Identities=16%  Similarity=0.130  Sum_probs=141.9

Q ss_pred             CCceeEEEEecCCceeeCccch-hhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh--------------h-h
Q 035566            1 MTKYECLLFDVDDTLYSHSYGF-SNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG--------------L-K   64 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~-~   64 (238)
                      ||++|+|+||+||||+|+.... ..++.+     +++++|.+... ..+    ...+|.....              + .
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~   70 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-EEA----RGPMGLGKWDHIRALLKMPRVAARWQA   70 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-HHH----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence            8889999999999999964332 344443     44556765322 111    1111211100              0 0


Q ss_pred             hccCCCChH-------hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc-ceee
Q 035566           65 AVGYDFDND-------DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF-DGIV  133 (238)
Q Consensus        65 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~  133 (238)
                      ..+.....+       .+...+.... .....++||+.++|+.|+.+   .+|+||+....+..+++.+++.++| +.++
T Consensus        71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~  149 (267)
T PRK13478         71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV  149 (267)
T ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence            111111111       1121111111 23468899999999999754   5799999999999999999888875 8888


Q ss_pred             ecccCCCCCCCCCchHHHHH-HHHhcCCC-CCeEEEEeCCccchhHHHhcCCeEEEecCCCC------------------
Q 035566          134 NFESLNPTNKTTGQELQLIS-MLRMVAHH-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------------------  193 (238)
Q Consensus       134 ~~~~~~~~k~~~~~~~~~~~-~~~~~~~~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------------------  193 (238)
                      ++++....||    .+.++. +++++|+. |++|++|||+.+|+++|+++|+.+|++.++..                  
T Consensus       150 ~~~~~~~~KP----~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~  225 (267)
T PRK13478        150 TTDDVPAGRP----YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELA  225 (267)
T ss_pred             cCCcCCCCCC----ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHH
Confidence            8887777776    666666 58999996 69999999999999999999999999987642                  


Q ss_pred             -----------CccccccccChhHHHHHhHHhhhccccc
Q 035566          194 -----------TKGADYALENIHNIREAFPELWDADEIS  221 (238)
Q Consensus       194 -----------~~~ad~v~~~~~el~~~l~~~~~~~~~~  221 (238)
                                 ..+|+++++++.+|.+++..+..++..+
T Consensus       226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~~~~  264 (267)
T PRK13478        226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARLARG  264 (267)
T ss_pred             HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHHhcC
Confidence                       4569999999999999887766655444

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.95  E-value=6e-28  Score=185.39  Aligned_cols=192  Identities=21%  Similarity=0.255  Sum_probs=134.9

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCC----ChhHHHHHHHHHHHhhccchhhhhhccC--CCC----
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGI----EESEVSEFNRVLYKNYGTSMAGLKAVGY--DFD----   71 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----   71 (238)
                      .++++|+||+||||+|+...+..++.+     +++++|.    +.... .+.   ....|.........-.  ...    
T Consensus        20 ~~~k~viFDlDGTLiDs~~~~~~a~~~-----~~~~~g~~~g~~~~~~-~~~---~~~~G~~~~~~~~~~~~~~~~~~~~   90 (248)
T PLN02770         20 APLEAVLFDVDGTLCDSDPLHYYAFRE-----MLQEINFNGGVPITEE-FFV---ENIAGKHNEDIALGLFPDDLERGLK   90 (248)
T ss_pred             CccCEEEEcCCCccCcCHHHHHHHHHH-----HHHHhccccCCCCCHH-HHH---HHcCCCCHHHHHHHHcCcchhhHHH
Confidence            468999999999999976666666664     3444432    22221 111   1112322222111000  000    


Q ss_pred             -hHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCc
Q 035566           72 -NDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQ  147 (238)
Q Consensus        72 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~  147 (238)
                       ...+...+.. .......++||+.++|+.|+.+   .+|+||+....+...++++|+.++|+.++++++....||    
T Consensus        91 ~~~~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP----  165 (248)
T PLN02770         91 FTDDKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKP----  165 (248)
T ss_pred             HHHHHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCC----
Confidence             0111111221 1113468899999999988644   689999999999999999999999999999998887776    


Q ss_pred             hHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHH
Q 035566          148 ELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNI  207 (238)
Q Consensus       148 ~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el  207 (238)
                      .+.++. +++++|++|++|++|||+..|+++|+++|+++|++.++..     ..+++++++++.|+
T Consensus       166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~  231 (248)
T PLN02770        166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP  231 (248)
T ss_pred             ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence            666666 4899999999999999999999999999999999987643     34789999999993

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.95  E-value=1.9e-27  Score=180.13  Aligned_cols=197  Identities=18%  Similarity=0.238  Sum_probs=136.3

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhH
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDY   75 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   75 (238)
                      |+++++|+||+||||+|+......++.+     .+.++|++.... .+...+   .|......     ...+...+.+++
T Consensus         1 ~~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~   71 (221)
T PRK10563          1 MSQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLE-EVFKRF---KGVKLYEIIDIISKEHGVTLAKAEL   71 (221)
T ss_pred             CCCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHH-HHHHHh---cCCCHHHHHHHHHHHhCCCCCHHHH
Confidence            7889999999999999965544455543     445677653321 111111   12211111     111222333333


Q ss_pred             HHhhhC---CCCCCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccc-eeeecccCCCCCCCCCchHHH
Q 035566           76 HSFVHG---RLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFD-GIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        76 ~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      ...+..   ........++||+.++|+.|+.+.+|+||++...+...++++|+.++|+ .++++++.+..||    .+++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP----~p~~  147 (221)
T PRK10563         72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKP----DPAL  147 (221)
T ss_pred             HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCC----ChHH
Confidence            322211   1112357889999999999998899999999999999999999999996 5677777777776    7777


Q ss_pred             HHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHH
Q 035566          152 ISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREA  210 (238)
Q Consensus       152 ~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~  210 (238)
                      +.. ++++|++|++|++|||+..|+++|+++|++++++.++..    ...++.++.++.||.++
T Consensus       148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~  211 (221)
T PRK10563        148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPEL  211 (221)
T ss_pred             HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHH
Confidence            775 899999999999999999999999999999998865432    22345567777777654

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=1.5e-27  Score=181.31  Aligned_cols=195  Identities=15%  Similarity=0.139  Sum_probs=138.0

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc-cCCCC-------hHh
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV-GYDFD-------NDD   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~   74 (238)
                      ++++|+||+||||+|+...+..++..     +++++|.+......+..    ..|......... .....       .+.
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALIPE   81 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence            36899999999999976655555553     55667765332222221    112222211110 00011       122


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      +.+.+..... ...+++||+.++|+.|+.+   .+++||+........++++|+.++|+.+++++.....||    ++.+
T Consensus        82 ~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~p~~  156 (229)
T PRK13226         82 FLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKP----HPLP  156 (229)
T ss_pred             HHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCC----CHHH
Confidence            3333332222 3467899999999998654   579999998888889999999999999888877766666    6666


Q ss_pred             HH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-------CccccccccChhHHHHHh
Q 035566          152 IS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNIREAF  211 (238)
Q Consensus       152 ~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el~~~l  211 (238)
                      +. +++++|++|++|++|||+.+|+.+|+++|+.++++.++..       ..+++++++++.||.+.+
T Consensus       157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~  224 (229)
T PRK13226        157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA  224 (229)
T ss_pred             HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence            66 4899999999999999999999999999999999977652       235899999999997754

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.95  E-value=7.2e-27  Score=179.62  Aligned_cols=200  Identities=10%  Similarity=0.111  Sum_probs=139.9

Q ss_pred             ceeEEEEecCCceeeCccchhh-HHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-c-cCCCChH---h--
Q 035566            3 KYECLLFDVDDTLYSHSYGFSN-KCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-V-GYDFDND---D--   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~---~--   74 (238)
                      .+++|+|||||||+|+...++. ++.     .+++++|++......    .....|........ . ......+   .  
T Consensus        23 ~~k~vIFDlDGTLvDS~~~~~~~a~~-----~~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~   93 (260)
T PLN03243         23 GWLGVVLEWEGVIVEDDSELERKAWR-----ALAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA   93 (260)
T ss_pred             CceEEEEeCCCceeCCchHHHHHHHH-----HHHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence            3789999999999996555543 444     356667876433211    11123433222211 0 0011111   1  


Q ss_pred             --HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566           75 --YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL  149 (238)
Q Consensus        75 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~  149 (238)
                        +...+. ........++||+.++|+.|+.+   .+|+||+....+..+++++|+..+|+.++++++....||    .+
T Consensus        94 ~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP----~P  168 (260)
T PLN03243         94 IRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKP----DP  168 (260)
T ss_pred             HHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCC----CH
Confidence              111111 11123467899999999998754   579999999999999999999999999999988877776    77


Q ss_pred             HHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhHHhhh
Q 035566          150 QLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       150 ~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      .++.. ++++|++|++|++|||+..|+++|+++|+.+|++.....   ...+++++.++.+|....-.-+.
T Consensus       169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~  239 (260)
T PLN03243        169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLS  239 (260)
T ss_pred             HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhh
Confidence            77765 899999999999999999999999999999999963321   34689999999998766443333

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.95  E-value=2.1e-26  Score=174.35  Aligned_cols=195  Identities=14%  Similarity=0.128  Sum_probs=137.3

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-c--cCCCCh---H----
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-V--GYDFDN---D----   73 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~---~----   73 (238)
                      +|+|+||+||||+|+.+.+..++.+     +.++.|.+...... .+.   ..|........ .  ....+.   +    
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEV-QSA---WMGQSKIEAIRALLALDGADEAEAQAAFA   71 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHH-HHh---hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence            5899999999999977666666654     44556775433211 110   12322222111 0  011111   1    


Q ss_pred             hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceeeecccCCCCCCCCCch
Q 035566           74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIVNFESLNPTNKTTGQE  148 (238)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~~~~~~~~~k~~~~~~  148 (238)
                      .+.+.+.........+++||+.++|+.++.+   .+|+||+....+..+++++|+.  ++|+.++++++....||    .
T Consensus        72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP----~  147 (220)
T TIGR03351        72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRP----A  147 (220)
T ss_pred             HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCC----C
Confidence            1222222222223468999999999999754   5799999999999999999998  99999999888776665    6


Q ss_pred             HHHHHH-HHhcCCC-CCeEEEEeCCccchhHHHhcCCeE-EEecCCCC------CccccccccChhHHHHHh
Q 035566          149 LQLISM-LRMVAHH-FFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       149 ~~~~~~-~~~~~~~-~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      +.++.. ++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++..      ..+++++++++.+|..++
T Consensus       148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~  219 (220)
T TIGR03351       148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL  219 (220)
T ss_pred             HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence            666665 8999997 799999999999999999999999 88877642      356889999999987654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.95  E-value=5.3e-26  Score=171.86  Aligned_cols=201  Identities=17%  Similarity=0.194  Sum_probs=136.3

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccc-----hhhhhhccCCCChHhHHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTS-----MAGLKAVGYDFDNDDYHS   77 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   77 (238)
                      ++|+|+|||||||+|+. .....+.+...+.+.+..|.+...........+...+..     ...+.. ........+..
T Consensus         9 ~~k~vIFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   86 (224)
T PRK14988          9 DVDTVLLDMDGTLLDLA-FDNYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSE-RLGLDICAMTT   86 (224)
T ss_pred             cCCEEEEcCCCCccchh-hhchHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHH-HhCCCHHHHHH
Confidence            57999999999999942 112334443444455677887554322111111111100     001111 01111111111


Q ss_pred             hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566           78 FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM  154 (238)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~  154 (238)
                      .     ......++||+.++|+.|+.+   .+++||+....+...++++|+..+|+.++++++.+..||    .++++..
T Consensus        87 ~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP----~p~~~~~  157 (224)
T PRK14988         87 E-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKE----DQRLWQA  157 (224)
T ss_pred             H-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCC----CHHHHHH
Confidence            1     113468899999999999765   579999999999999999999999999999888887776    7777775


Q ss_pred             -HHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC--CccccccccChhHHHHHhHHh
Q 035566          155 -LRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR--TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       155 -~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~--~~~ad~v~~~~~el~~~l~~~  214 (238)
                       ++++|++|++|++|||+..|+++|+++|+++ +++.++..  ...+..+..++.++.+++..+
T Consensus       158 ~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l  221 (224)
T PRK14988        158 VAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL  221 (224)
T ss_pred             HHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence             8999999999999999999999999999975 66766553  345556678888887766544

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.95  E-value=1.6e-26  Score=178.39  Aligned_cols=122  Identities=16%  Similarity=0.135  Sum_probs=104.2

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHHHHH-HHHhcCC
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQLIS-MLRMVAH  160 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~  160 (238)
                      ....++||+.++|+.|+.+   .+|+||++...+..+++++|+..+| +.++++++....||    .+.++. +++++|+
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP----~p~~~~~a~~~l~~  171 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRP----APWMALKNAIELGV  171 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCC----CHHHHHHHHHHcCC
Confidence            3468899999999999754   5799999999999999999999986 88888888777776    666666 4899999


Q ss_pred             C-CCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHH
Q 035566          161 H-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREA  210 (238)
Q Consensus       161 ~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~  210 (238)
                      . |++|++|||+++|+.+|+++|+.+|++.++..                             ..+|+++++++.||.++
T Consensus       172 ~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~  251 (253)
T TIGR01422       172 YDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAV  251 (253)
T ss_pred             CCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHh
Confidence            5 99999999999999999999999999987642                             35689999999998765


Q ss_pred             h
Q 035566          211 F  211 (238)
Q Consensus       211 l  211 (238)
                      +
T Consensus       252 ~  252 (253)
T TIGR01422       252 I  252 (253)
T ss_pred             h
Confidence            4

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK11587 putative phosphatase; Provisional

Probab=99.94  E-value=1.7e-26  Score=174.44  Aligned_cols=190  Identities=16%  Similarity=0.174  Sum_probs=131.2

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-hhccCCCChHh----HHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-KAVGYDFDNDD----YHS   77 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~   77 (238)
                      ++++|+||+||||+|+...+..++.+     +++++|++......   .   ..|...... .........+.    +..
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~---~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVLN---F---IHGKQAITSLRHFMAGASEAEIQAEFTR   70 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHHH---H---HcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence            58999999999999976666566653     55667876432111   1   113222111 11100111111    211


Q ss_pred             h-hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           78 F-VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        78 ~-~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      . ..........+++||+.++|+.|+.+   .+++||+........++..++ .+|+.+++++.....||    .+..+.
T Consensus        71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP----~p~~~~  145 (218)
T PRK11587         71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKP----EPDAYL  145 (218)
T ss_pred             HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCC----CcHHHH
Confidence            1 00111124568899999999988654   679999988888888888888 45778888777766666    666666


Q ss_pred             H-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHH
Q 035566          154 M-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIR  208 (238)
Q Consensus       154 ~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~  208 (238)
                      . ++++|++|++|++|||+..|+++|+++|+.+++++++..   ...++++++++.||.
T Consensus       146 ~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~  204 (218)
T PRK11587        146 LGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT  204 (218)
T ss_pred             HHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence            5 899999999999999999999999999999999987653   346889999999874

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.94  E-value=2.5e-26  Score=182.61  Aligned_cols=204  Identities=10%  Similarity=0.097  Sum_probs=143.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--cCCCCh---H----
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--GYDFDN---D----   73 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~----   73 (238)
                      .+++|+|||||||+|+...+....+.    .+.+++|++......+    ....|.+.......  ....+.   +    
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~----~l~~e~G~~~~~~e~~----~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~  201 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWL----TLAQEEGKSPPPAFIL----RRVEGMKNEQAISEVLCWSRDPAELRRMAT  201 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHH----HHHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhhccCCHHHHHHHHH
Confidence            57899999999999965545543332    2556778764432211    12234333322111  001111   1    


Q ss_pred             hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      .+.+.+.... .....++||+.++|+.|+.+   .+|+||+....++.+++++|+.++|+.++++++....||    ++.
T Consensus       202 ~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP----~Pe  276 (381)
T PLN02575        202 RKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKP----DPE  276 (381)
T ss_pred             HHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCC----CHH
Confidence            1222222222 23467899999999998654   679999999999999999999999999999998877776    777


Q ss_pred             HHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhHHhhhccc
Q 035566          151 LISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFPELWDADE  219 (238)
Q Consensus       151 ~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~~~~~~~~  219 (238)
                      ++.. ++++|++|++|++|||+..|+++|+++|+.+|+++++..   ...++++++++.||....-+-+...+
T Consensus       277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~  349 (381)
T PLN02575        277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIE  349 (381)
T ss_pred             HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence            7764 899999999999999999999999999999999987543   33589999999998644333344443

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.94  E-value=3.7e-26  Score=173.14  Aligned_cols=197  Identities=21%  Similarity=0.336  Sum_probs=131.9

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChh--HHHHHHHHHHHhhccch----hhh-hhccCCCChH---
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEES--EVSEFNRVLYKNYGTSM----AGL-KAVGYDFDND---   73 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~---   73 (238)
                      +++|+||+||||+++.+.+..++.... + .....|.+..  ............++...    ... .........+   
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNAI-E-VLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA   79 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHH-H-HHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence            789999999999997666555544322 2 2334454432  21111111112222111    111 1111111111   


Q ss_pred             hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      .+...+.. .....+.++||+.++|+.|+.+   .+++||+....+...++++|+..+|+.++++++.+..||    .+.
T Consensus        80 ~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~~~  154 (221)
T TIGR02253        80 AFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKP----HPK  154 (221)
T ss_pred             HHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCC----CHH
Confidence            11111111 1113468899999999998754   579999999999999999999999999999988888876    666


Q ss_pred             HHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-------CccccccccChhHH
Q 035566          151 LISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNI  207 (238)
Q Consensus       151 ~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el  207 (238)
                      ++.. ++++|++|+++++|||+. +|+.+|+++|+.+|++.++..       ...+++++.++.||
T Consensus       155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            6664 899999999999999998 899999999999999987653       23578888888775

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.94  E-value=2e-26  Score=174.56  Aligned_cols=193  Identities=16%  Similarity=0.178  Sum_probs=136.2

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccC-CCChHhH-
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGY-DFDNDDY-   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~-   75 (238)
                      ++++|+||+||||+|+...+..++.+     +++++|++......+.    ...|.......     .... ......+ 
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   76 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREELP----DTLGLRIDQVVDLWYARQPWNGPSRQEVV   76 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHHH----HhhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence            48999999999999965544444442     5566776543322221    11222211111     0011 1112221 


Q ss_pred             ---HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566           76 ---HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL  149 (238)
Q Consensus        76 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~  149 (238)
                         .+.+.+.+ .....++||+.++|+.++.+   .+|+||+....+...++.+++..+|+.+++++..+..||    .+
T Consensus        77 ~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~  151 (222)
T PRK10826         77 QRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKP----HP  151 (222)
T ss_pred             HHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCC----CH
Confidence               11121111 23468999999999988644   689999999999999999999999999999888777776    55


Q ss_pred             HHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHH
Q 035566          150 QLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIRE  209 (238)
Q Consensus       150 ~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~  209 (238)
                      .+++ +++.+|++|++|++|||+.+|+++|+++|+++|+++.+..     ...+++++.++.||..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~  217 (222)
T PRK10826        152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA  217 (222)
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence            5555 5899999999999999999999999999999999987653     2368999999999864

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.94  E-value=8.4e-26  Score=174.79  Aligned_cols=197  Identities=17%  Similarity=0.225  Sum_probs=138.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-ccCC-CChH----hHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-VGYD-FDND----DYH   76 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~----~~~   76 (238)
                      ++++++||+||||+|+.+.+...+.+     +.+++|++......    +....+........ .+.. ...+    .+.
T Consensus        61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~  131 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ  131 (273)
T ss_pred             hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence            47899999999999976666555553     55677765332211    11112222221111 1111 0111    222


Q ss_pred             HhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           77 SFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      +.+...  ...++++||+.++|+.|+.+   .+|+||+....+...++++|+.++|+.+++.+...   +   +...+..
T Consensus       132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~---~---k~~~~~~  203 (273)
T PRK13225        132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL---S---KRRALSQ  203 (273)
T ss_pred             HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC---C---CHHHHHH
Confidence            222221  24568899999999999754   57999999999999999999999999887665432   1   2344555


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhhh
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      ++++++++|++|++|||+.+|+++|+++|+.+|++.++..      ...|+++++++.+|.+++.++.+
T Consensus       204 ~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~  272 (273)
T PRK13225        204 LVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR  272 (273)
T ss_pred             HHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence            6899999999999999999999999999999999988753      34699999999999998877653

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.94  E-value=6.7e-26  Score=170.78  Aligned_cols=190  Identities=17%  Similarity=0.196  Sum_probs=133.6

Q ss_pred             EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh----h-hccCCCCh-------Hh
Q 035566            7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL----K-AVGYDFDN-------DD   74 (238)
Q Consensus         7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-------~~   74 (238)
                      |+||+||||+|+...+..+++.     ..+++|.+......+.    ...|......    . ..+...+.       ..
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARVI----GFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL   71 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence            6899999999975555555543     5566776532222221    1123222111    1 01111111       11


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      +.+.+.... .....++||+.++|+.++.+   .+|+||+....+...++++|+..+|+.+++++.....||    .+.+
T Consensus        72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~p~~  146 (213)
T TIGR01449        72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKP----HPDP  146 (213)
T ss_pred             HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCC----ChHH
Confidence            222222222 23467899999999998754   679999999999999999999999999998887777776    6666


Q ss_pred             HH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHH
Q 035566          152 IS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREA  210 (238)
Q Consensus       152 ~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~  210 (238)
                      +. +++++|++|+++++|||+.+|+.+|+++|++++++.++..      ...++++++++.+|..+
T Consensus       147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~  212 (213)
T TIGR01449       147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL  212 (213)
T ss_pred             HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence            65 5899999999999999999999999999999999976542      35689999999998764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.94  E-value=8.9e-26  Score=169.01  Aligned_cols=190  Identities=15%  Similarity=0.228  Sum_probs=134.5

Q ss_pred             EEEecCCceeeCccchhhHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHhhccchhhhhh-ccCCCC-hHhHHHhhhCCC
Q 035566            7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQK-LGIEESEVSEFNRVLYKNYGTSMAGLKA-VGYDFD-NDDYHSFVHGRL   83 (238)
Q Consensus         7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~   83 (238)
                      |+||+||||+|+.+.+..++.+     ..++ .|.+......    +.+..|.....+.. .+.... ...+...... .
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~   70 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAI-----AYREVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-L   70 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHH-----HHHHhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH-h
Confidence            6899999999976666666664     3333 3543222111    22222333322211 121111 1112222221 1


Q ss_pred             CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcC
Q 035566           84 PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVA  159 (238)
Q Consensus        84 ~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~  159 (238)
                       ...+.++||+.++|+.|+.+   .+|+||+....+...++++|+..+|+.++++++....||    ++.++. +++++|
T Consensus        71 -~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~~~~~~~~~~~~~  145 (205)
T TIGR01454        71 -AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKP----APDIVREALRLLD  145 (205)
T ss_pred             -hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCC----ChHHHHHHHHHcC
Confidence             24578899999999988654   679999999999999999999999999998887776665    566555 589999


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      ++|+++++|||+.+|+.+|+++|++++++.++..      ..+++++++++.+|..++
T Consensus       146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~  203 (205)
T TIGR01454       146 VPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC  203 (205)
T ss_pred             CChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence            9999999999999999999999999999987753      456899999999998754

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.94  E-value=8.1e-26  Score=175.52  Aligned_cols=198  Identities=17%  Similarity=0.220  Sum_probs=139.4

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc-------cCCCCh---
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV-------GYDFDN---   72 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---   72 (238)
                      .+++|+||+||||+|+...+...+.     .+.+++|.+......+..    ..|.....+...       ....+.   
T Consensus        12 ~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~l~~~~~~~~~~~~~~   82 (272)
T PRK13223         12 LPRLVMFDLDGTLVDSVPDLAAAVD-----RMLLELGRPPAGLEAVRH----WVGNGAPVLVRRALAGSIDHDGVDDELA   82 (272)
T ss_pred             cCCEEEEcCCCccccCHHHHHHHHH-----HHHHHcCCCCCCHHHHHH----HhChhHHHHHHHHhcccccccCCCHHHH
Confidence            3789999999999997665555554     366777876433222211    112221111100       011111   


Q ss_pred             Hh----HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           73 DD----YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        73 ~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                      +.    +.+.+...  .....++||+.++|+.++.+   .+++||++...+...++++++..+|+.+++++.....||  
T Consensus        83 ~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp--  158 (272)
T PRK13223         83 EQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKP--  158 (272)
T ss_pred             HHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCC--
Confidence            11    22222221  12357899999999998654   579999999999999999999999999988887766665  


Q ss_pred             CchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          146 GQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                        .+.++. +++++|++|++|++|||+.+|+++|+++|++++++.++..      ...++++++++.+|.+++....
T Consensus       159 --~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~~~  233 (272)
T PRK13223        159 --DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCADPA  233 (272)
T ss_pred             --CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhccc
Confidence              666555 5899999999999999999999999999999999987642      3469999999999987665544

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.93  E-value=2.5e-25  Score=169.17  Aligned_cols=198  Identities=17%  Similarity=0.223  Sum_probs=138.9

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChH---
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDND---   73 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---   73 (238)
                      +++++|+||+||||+++.+.+..++..     +.+++|.+......+..    ..|.....+.     ..+.....+   
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~   74 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELLE   74 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHHH
Confidence            468999999999999965554444442     45567765433222221    1121111111     001111211   


Q ss_pred             ----hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCC
Q 035566           74 ----DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTG  146 (238)
Q Consensus        74 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~  146 (238)
                          .+...+..... ....++||+.++|+.++.+   .+++||+....+..+++++|+..+|+.+++.+.....||   
T Consensus        75 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---  150 (226)
T PRK13222         75 KLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKP---  150 (226)
T ss_pred             HHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCc---
Confidence                22222222221 2467899999999988754   579999999999999999999999999988887776665   


Q ss_pred             chHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566          147 QELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       147 ~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~  213 (238)
                       .+.++. ++++++++|+++++|||+.+|+++|+++|++++++.++..      ...++++++++.+|..++..
T Consensus       151 -~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~  223 (226)
T PRK13222        151 -DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL  223 (226)
T ss_pred             -ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence             555555 5899999999999999999999999999999999987653      34688999999999887754

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.93  E-value=1.5e-25  Score=168.75  Aligned_cols=195  Identities=22%  Similarity=0.294  Sum_probs=133.7

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccch----hhhhhccCC---CChHhH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM----AGLKAVGYD---FDNDDY   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~   75 (238)
                      ++++|+|||||||+|+......+|.+     +++++|++.....     ....+|...    ..+......   ......
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEE-----IRELHGGGIARIIDLLRKLAAGEDPADLAEL   70 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence            37999999999999975545555553     5666887754321     111122111    111111111   111111


Q ss_pred             HHhhh--CCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           76 HSFVH--GRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        76 ~~~~~--~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      .....  ........+++||+.++|+.|+.   ..++.|++++..+...++.+|+.++|+.+++++++...||    .|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP----~Pd  146 (221)
T COG0637          71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKP----APD  146 (221)
T ss_pred             HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCC----CCH
Confidence            11111  11223467899999999999984   4678888888899999999999999999999988888876    777


Q ss_pred             HHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566          151 LISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF  211 (238)
Q Consensus       151 ~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l  211 (238)
                      +|.. ++++|++|++|++|+|+++++++|+++||.+++++.+..        ...++.+..++.++...+
T Consensus       147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  216 (221)
T COG0637         147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL  216 (221)
T ss_pred             HHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence            7776 899999999999999999999999999999999987443        223444555555554433

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.93  E-value=8.1e-25  Score=166.15  Aligned_cols=198  Identities=23%  Similarity=0.287  Sum_probs=135.4

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH--HHHH---HHHHHhh--c-cchhh---------hhhc
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV--SEFN---RVLYKNY--G-TSMAG---------LKAV   66 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~---~~~~~~~--~-~~~~~---------~~~~   66 (238)
                      +|+|+||+||||+|+.......+.+     +.+..|++....  ..+.   ...+..+  + .....         ....
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY   75 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence            5899999999999976655544543     444566653211  1111   1111111  1 01010         1111


Q ss_pred             cCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCC
Q 035566           67 GYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKT  144 (238)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~  144 (238)
                      +.....+.+...+.+... ....++||+.++|+.++.+  .+++||+....+...++.+++..+|+.++++++.+..|| 
T Consensus        76 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP-  153 (224)
T TIGR02254        76 NTEADEALLNQKYLRFLE-EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKP-  153 (224)
T ss_pred             CCCCcHHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCC-
Confidence            111111122222222111 2357899999999888744  689999999999999999999999999999988887776 


Q ss_pred             CCchHHHHHH-HHhc-CCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566          145 TGQELQLISM-LRMV-AHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF  211 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~-~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l  211 (238)
                         .+.++.. ++++ |++|+++++|||+. +|+.+|+++|+++++++++..    ...+++++.++.||..++
T Consensus       154 ---~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~  224 (224)
T TIGR02254       154 ---DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL  224 (224)
T ss_pred             ---CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence               7776665 8999 99999999999998 799999999999999977532    346789999999988754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.93  E-value=9.4e-25  Score=165.74  Aligned_cols=121  Identities=20%  Similarity=0.257  Sum_probs=103.0

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCC-C
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHH-F  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~-~  162 (238)
                      ..+++||+.++|+.|+..  .+++||+....+...++++|+.++|+.++++++.+..||    .+.++.. ++++|+. +
T Consensus        93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP----~p~~~~~~~~~~~~~~~  168 (224)
T PRK09449         93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKP----DVAIFDYALEQMGNPDR  168 (224)
T ss_pred             cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCC----CHHHHHHHHHHcCCCCc
Confidence            367899999999999733  579999999999999999999999999999998888876    7777775 8999975 5


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF  211 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l  211 (238)
                      ++|++|||+. +|+.+|+++|+.+++++++..    ...+++++.++.||.+++
T Consensus       169 ~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l  222 (224)
T PRK09449        169 SRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL  222 (224)
T ss_pred             ccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence            8999999998 699999999999999975331    235889999999998765

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.93  E-value=3.3e-25  Score=168.85  Aligned_cols=123  Identities=23%  Similarity=0.352  Sum_probs=109.9

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      .++++|++.+.|+.++.+  ++++||+....+...++.+|+.++||.+++++..+..||    .+.+|+. ++++|++|+
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP----~~~~f~~~~~~~g~~p~  172 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKP----DPEIFEYALEKLGVPPE  172 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCC----CcHHHHHHHHHcCCCcc
Confidence            478899999999999877  899999999999999999999999999999999998887    8888886 899999999


Q ss_pred             eEEEEeCCccc-hhHHHhcCCeEEEecCCCCC-----ccccccccChhHHHHHhHH
Q 035566          164 QRLFFDDSTRN-IECGKSIGLHTVLVGTSRRT-----KGADYALENIHNIREAFPE  213 (238)
Q Consensus       164 ~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~-----~~ad~v~~~~~el~~~l~~  213 (238)
                      ++++|||+..+ +.+|+.+||++|+++.+...     ..+++.+.++.++.+++..
T Consensus       173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~  228 (229)
T COG1011         173 EALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER  228 (229)
T ss_pred             eEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence            99999999866 69999999999999886532     4688899999999887653

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.92  E-value=5.7e-25  Score=162.55  Aligned_cols=173  Identities=16%  Similarity=0.255  Sum_probs=118.8

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh----hhh-ccCCCChHhHH
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG----LKA-VGYDFDNDDYH   76 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~   76 (238)
                      .++++|+||+||||+|+...+..++.+     +.+++|.+.... .+    ....|.....    +.. .+.....+.+.
T Consensus         3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   72 (188)
T PRK10725          3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDEQ-AM----VALNGSPTWRIAQAIIELNQADLDPHALA   72 (188)
T ss_pred             CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-HH----HHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            357999999999999976655555553     445577653221 11    1112221111    111 11122222222


Q ss_pred             Hh---hhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566           77 SF---VHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        77 ~~---~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      ..   ...........++|+ .++|..++.  +.+|+||+....++..++++|+..+|+.++++++....||    .+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP----~p~~  147 (188)
T PRK10725         73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKP----APDT  147 (188)
T ss_pred             HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCC----ChHH
Confidence            21   111111234567776 578877763  4789999999999999999999999999999998887776    7776


Q ss_pred             HHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566          152 ISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG  189 (238)
Q Consensus       152 ~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~  189 (238)
                      +.. ++++|++|++|++|||+..|+++|+++|+++|++.
T Consensus       148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            665 89999999999999999999999999999999875

>PLN02940 riboflavin kinase

Probab=99.92  E-value=7.7e-25  Score=177.17  Aligned_cols=191  Identities=17%  Similarity=0.242  Sum_probs=136.5

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhHHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDYHS   77 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   77 (238)
                      ++++|+||+||||+|+...+..++..     +.+++|.+.....     +....|......     ...+.....+++..
T Consensus        10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   79 (382)
T PLN02940         10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS   79 (382)
T ss_pred             cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            37899999999999976655555543     5566776543211     112223222211     11122222232222


Q ss_pred             ----hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHH-hcCcccccceeeecccCCCCCCCCCchH
Q 035566           78 ----FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLR-KLGLEDCFDGIVNFESLNPTNKTTGQEL  149 (238)
Q Consensus        78 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~-~~~~~~~f~~i~~~~~~~~~k~~~~~~~  149 (238)
                          .+...  .....++||+.++|+.|+.+   .+|+||+....+...++ +.|+.++|+.++++++....||    .+
T Consensus        80 ~~~~~~~~~--~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP----~p  153 (382)
T PLN02940         80 EITPLLSEQ--WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKP----SP  153 (382)
T ss_pred             HHHHHHHHH--HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCC----CH
Confidence                12111  13467899999999999755   67999999998888887 7899999999999998887776    66


Q ss_pred             HHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHH
Q 035566          150 QLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIRE  209 (238)
Q Consensus       150 ~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~  209 (238)
                      .++. +++++|++|++|++|||+..|+++|+++|+.+|++.++..    ...++++++++.|+..
T Consensus       154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~  218 (382)
T PLN02940        154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP  218 (382)
T ss_pred             HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence            6666 4899999999999999999999999999999999987642    4568899999998753

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.92  E-value=7.1e-24  Score=161.97  Aligned_cols=116  Identities=10%  Similarity=0.153  Sum_probs=97.1

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      .+.++||+.++|+.|+.+  .+++||++..     ++..|+..+|+.+++++..+..||    .+.++.. ++++|++|+
T Consensus       111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP----~p~~~~~a~~~~~~~~~  181 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKP----FSDMYHLAAEKLNVPIG  181 (238)
T ss_pred             cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCC----cHHHHHHHHHHcCCChh
Confidence            367889999999999754  6799998764     478899999999999988887776    7777775 889999999


Q ss_pred             eEEEEeCC-ccchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566          164 QRLFFDDS-TRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF  211 (238)
Q Consensus       164 ~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l  211 (238)
                      +|++|||+ ..|+.+|+++|+.+++++++..        ...+++.+.++.||.+++
T Consensus       182 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~  238 (238)
T PRK10748        182 EILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI  238 (238)
T ss_pred             HEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence            99999999 5999999999999999977542        135788899999988754

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.91  E-value=1.2e-23  Score=174.92  Aligned_cols=201  Identities=12%  Similarity=0.158  Sum_probs=134.0

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHhhccchhhhhh-cc--CCCC-hHh---
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKL-GIEESEVSEFNRVLYKNYGTSMAGLKA-VG--YDFD-NDD---   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-~~~---   74 (238)
                      ++++|+||+||||+|+.+.+...+.+.+.++..... +.... ..    .+....|........ ..  .... .+.   
T Consensus       240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~  314 (459)
T PRK06698        240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-ID----KYREIMGVPLPKVWEALLPDHSLEIREQTDA  314 (459)
T ss_pred             hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HH----HHHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence            368999999999999877777878776655321111 11111 11    122223333222211 00  0100 111   


Q ss_pred             -HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           75 -YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        75 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                       +.+.+.+.+.....+++||+.++|+.|+.+   .+|+||+....+...++++|+..+|+.++++++... +|  +| ..
T Consensus       315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~-~~--kP-~~  390 (459)
T PRK06698        315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS-LN--KS-DL  390 (459)
T ss_pred             HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC-CC--Cc-HH
Confidence             222222222223468899999999988654   679999999999999999999999999998876632 33  22 23


Q ss_pred             HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHHh
Q 035566          151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~~  214 (238)
                      +...++++  +|++|++|||+.+|+.+|+++|+.+|++.++..    ...+++++.++.||.+++..+
T Consensus       391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~  456 (459)
T PRK06698        391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV  456 (459)
T ss_pred             HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence            33346665  568999999999999999999999999977642    346899999999998877543

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.91  E-value=1.4e-23  Score=163.96  Aligned_cols=118  Identities=14%  Similarity=0.185  Sum_probs=94.5

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccc---ceeeecccCCCCCCCCCchHHHHH-HHHhcC
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCF---DGIVNFESLNPTNKTTGQELQLIS-MLRMVA  159 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~  159 (238)
                      .++++||+.++|+.++.   +.+|+||+....+..+++.++...+|   +.+ ++++....||    .+.++. +++++|
T Consensus       142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP----~p~~~~~a~~~~~  216 (286)
T PLN02779        142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKP----DPDIYNLAAETLG  216 (286)
T ss_pred             CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCC----CHHHHHHHHHHhC
Confidence            35889999999988864   46799999999998888876433444   334 5565555555    777666 489999


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHH
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIRE  209 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~  209 (238)
                      ++|++|++|||+.+|+++|+++|+++|++.++..    ...++++++++.++..
T Consensus       217 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~  270 (286)
T PLN02779        217 VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPL  270 (286)
T ss_pred             cChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcch
Confidence            9999999999999999999999999999977643    3468999999999764

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.90  E-value=2.9e-23  Score=153.02  Aligned_cols=169  Identities=18%  Similarity=0.287  Sum_probs=114.1

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChHhH---
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDNDDY---   75 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---   75 (238)
                      +++|+||+||||+|+......++.+     +.+++|.+...  ..   .....|.......     ..+...+.+..   
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QY---NTSLGGLSREDILRAILKLRKPGLSLETIHQL   70 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HH---HHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            5789999999999976544444443     45566765321  11   1111222211111     11112222211   


Q ss_pred             ----HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch
Q 035566           76 ----HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE  148 (238)
Q Consensus        76 ----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~  148 (238)
                          .+.+.+.+......++||+.++|+.|+.+   .+++||+  ..++.+++++|+..+|+.+++++..+..||    .
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp----~  144 (185)
T TIGR02009        71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKP----H  144 (185)
T ss_pred             HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCC----C
Confidence                11122112123478899999999988654   4688877  668889999999999999999887777765    6


Q ss_pred             HHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEe
Q 035566          149 LQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       149 ~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      +.++.. ++++|++|+++++|||+..|+++|+++|+++++|
T Consensus       145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            666664 8999999999999999999999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.90  E-value=3.9e-23  Score=153.95  Aligned_cols=102  Identities=22%  Similarity=0.335  Sum_probs=91.9

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      .++++||+.++|+.|+.+   .+++||++...+...++++|+..+|+.++++++.+..||    .+.+|.. ++++|++|
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~~~~p  165 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKP----APQVYQLALEALGVPP  165 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCC----CHHHHHHHHHHhCCCh
Confidence            357899999999999765   579999999999999999999999999999998888876    6777775 89999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +++++|||+.+|+.+|+++|+++|+++++.
T Consensus       166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             hhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence            999999999999999999999999998765

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.89  E-value=2.5e-22  Score=150.18  Aligned_cols=96  Identities=22%  Similarity=0.248  Sum_probs=82.8

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ...++||+.++|+.|+.+   .+|+||++.. ....++++|+..+|+.+++++..+..||    .+.++.. ++++|++|
T Consensus       103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~~~~~  177 (203)
T TIGR02252       103 PWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKP----DPKIFQEALERAGISP  177 (203)
T ss_pred             cceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCC----CHHHHHHHHHHcCCCh
Confidence            357899999999998754   5799998764 5788999999999999999988888776    6777764 89999999


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEE
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVL  187 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~  187 (238)
                      +++++|||+. +|+.+|+++|+++|+
T Consensus       178 ~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       178 EEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             hHEEEECCCchHHHHHHHHcCCeeeC
Confidence            9999999998 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.89  E-value=6.5e-23  Score=151.18  Aligned_cols=168  Identities=22%  Similarity=0.259  Sum_probs=112.0

Q ss_pred             EEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhH---H-
Q 035566            6 CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDY---H-   76 (238)
Q Consensus         6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~-   76 (238)
                      +|+||+||||+|+...+..++.+     +.+.+|++.....  ...   ..|......     ...+...+.+..   . 
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~--~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEF--NES---LKGVSREDSLERILDLGGKKYSEEEKEELAE   70 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH--HHH---hcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            48999999999976655555543     5566676643210  001   112111111     111222222111   1 


Q ss_pred             ---HhhhCCCC-CCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566           77 ---SFVHGRLP-YENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL  149 (238)
Q Consensus        77 ---~~~~~~~~-~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~  149 (238)
                         ..+..... .....++||+.++|+.|+.+   .+++||+..  ....++++|+..+|+.++++++.+..||    .+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~p  144 (185)
T TIGR01990        71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKP----DP  144 (185)
T ss_pred             HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCC----Ch
Confidence               11111110 12347899999999999755   568887643  4578999999999999999888877776    77


Q ss_pred             HHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566          150 QLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG  189 (238)
Q Consensus       150 ~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~  189 (238)
                      .++.. +++++++|+++++|||+.+|+++|+++|+++|+|+
T Consensus       145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence            77665 89999999999999999999999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.89  E-value=1.3e-23  Score=153.40  Aligned_cols=172  Identities=26%  Similarity=0.422  Sum_probs=115.3

Q ss_pred             EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCCCC
Q 035566            7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYE   86 (238)
Q Consensus         7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (238)
                      |+||+||||+++...+...+.    ..+.+.++.+.. ...+...+..........+... .........+.+.+.....
T Consensus         1 iifD~dgtL~d~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   74 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQ----RLALEEFGLEIS-AEELRELFGKSYEEALERLLER-FGIDPEEIQELFREYNLES   74 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHH----HHHHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHG
T ss_pred             cEEECCCCcEeCHHHHHHHHH----HHHHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhc-cchhHHHHHHHhhhhhhhh
Confidence            799999999996553444444    334555555422 1222111111111011111100 0000112222222111114


Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ..+++||+.++|+.++   .+.+++||++...+...++++|+..+|+.++++++.+..||    .+.++.. ++++|++|
T Consensus        75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp----~~~~~~~~~~~~~~~p  150 (176)
T PF13419_consen   75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKP----DPDAYRRALEKLGIPP  150 (176)
T ss_dssp             GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTT----SHHHHHHHHHHHTSSG
T ss_pred             ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhh----HHHHHHHHHHHcCCCc
Confidence            4688999999999987   33689999999999999999999999999999998888876    6666664 89999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEe
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      +++++|||+..|+.+|+.+|+.+|+|
T Consensus       151 ~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  151 EEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            99999999999999999999999986

...

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.88  E-value=4.3e-22  Score=178.60  Aligned_cols=192  Identities=19%  Similarity=0.286  Sum_probs=136.6

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-----ccC-CCChH---
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-----VGY-DFDND---   73 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~---   73 (238)
                      ++++|+|||||||+|+...+..++.+     +++++|++.... .    +....|.....+..     .+. ..+.+   
T Consensus        74 ~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e-~----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~  143 (1057)
T PLN02919         74 KVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVE-D----FVPFMGTGEANFLGGVASVKGVKGFDPDAAK  143 (1057)
T ss_pred             CCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHH-H----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence            58999999999999976555555553     556677764321 1    11222322222110     011 11111   


Q ss_pred             -hHHHhhhCCCC-CCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc-cccceeeecccCCCCCCCCCc
Q 035566           74 -DYHSFVHGRLP-YENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE-DCFDGIVNFESLNPTNKTTGQ  147 (238)
Q Consensus        74 -~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~k~~~~~  147 (238)
                       .+.+.+..... .....++||+.++|+.|+.+   .+|+||+....+...++++|+. .+|+.++++++....||    
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP----  219 (1057)
T PLN02919        144 KRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKP----  219 (1057)
T ss_pred             HHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCC----
Confidence             12222221111 11234789999999999765   5799999999999999999996 78999999988887776    


Q ss_pred             hHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHH
Q 035566          148 ELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIR  208 (238)
Q Consensus       148 ~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~  208 (238)
                      .++++.. ++++|++|++|++|||+..|+++|+++||++|++.++..     ..+++++++++.++.
T Consensus       220 ~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~  286 (1057)
T PLN02919        220 APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS  286 (1057)
T ss_pred             CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence            7777765 899999999999999999999999999999999988753     457899999999964

>PHA02597 30

Probab=99.88  E-value=7.4e-22  Score=146.90  Aligned_cols=180  Identities=15%  Similarity=0.096  Sum_probs=114.3

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchh-hhhhccCCCCh---HhHHHhh
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA-GLKAVGYDFDN---DDYHSFV   79 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~   79 (238)
                      +|+|+||+||||+|+..    .+.     .+.++.|++....   .    ...+.... .+.. ....+.   .++.+.+
T Consensus         2 ~k~viFDlDGTLiD~~~----~~~-----~~~~~~g~~~~~~---~----~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~   64 (197)
T PHA02597          2 KPTILTDVDGVLLSWQS----GLP-----YFAQKYNIPTDHI---L----KMIQDERFRDPGE-LFGCDQELAKKLIEKY   64 (197)
T ss_pred             CcEEEEecCCceEchhh----ccH-----HHHHhcCCCHHHH---H----HHHhHhhhcCHHH-HhcccHHHHHHHhhhh
Confidence            79999999999999432    222     3556677764321   1    11111100 0000 011111   1111111


Q ss_pred             hCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccccc----ceeeecccCCCCCCCCCchHHHHH
Q 035566           80 HGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCF----DGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      ..........++||+.++|+.|+..  .+++||.........++.+++..+|    +.+++++..   +|    +++++.
T Consensus        65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---~~----kp~~~~  137 (197)
T PHA02597         65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---ES----KEKLFI  137 (197)
T ss_pred             hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---cc----cHHHHH
Confidence            1111113457899999999999653  5677887666666677777776544    555555542   33    345555


Q ss_pred             -HHHhcCCCCCeEEEEeCCccchhHHHhc--CCeEEEecCCCC--CccccccccChhHHHH
Q 035566          154 -MLRMVAHHFFQRLFFDDSTRNIECGKSI--GLHTVLVGTSRR--TKGADYALENIHNIRE  209 (238)
Q Consensus       154 -~~~~~~~~~~~~v~vgD~~~di~~a~~~--G~~~i~v~~~~~--~~~ad~v~~~~~el~~  209 (238)
                       +++++|  |++++||||+..|+.+|+++  |+++++++++..  .+.+++.+.++.|+..
T Consensus       138 ~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~  196 (197)
T PHA02597        138 KAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN  196 (197)
T ss_pred             HHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence             589999  88899999999999999999  999999988874  3456788999988753

2 hypothetical protein; Provisional

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.87  E-value=2e-22  Score=148.34  Aligned_cols=96  Identities=33%  Similarity=0.488  Sum_probs=83.5

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      .+++||+.++|+.++.+   .+++||+.... .....++|+..+|+.+++++..+..||    .+.++.. ++++|++|+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP----~~~~~~~~~~~~~~~~~  158 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKP----DPDIYLLALKKLGLKPE  158 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCC----CHHHHHHHHHHcCCCcc
Confidence            67899999999988654   67999998887 666667999999999998888877776    6666665 899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEe
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      ++++|||+..|+.+|+++|+.+|++
T Consensus       159 ~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       159 ECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            9999999999999999999999875

HAD subfamilies caused by an overly broad single model.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.87  E-value=3.4e-21  Score=145.75  Aligned_cols=121  Identities=17%  Similarity=0.230  Sum_probs=87.9

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecc-------cCCCCCCCCCchHHHHH-HHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLIS-MLR  156 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-------~~~~~k~~~~~~~~~~~-~~~  156 (238)
                      .+++||+.++|+.++.+   .+|+||+....+..+++.+|+..+|...+..+       ..+.... +++++.++. +++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~~~~~  162 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVD-ASYKGKTLLILLR  162 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccC-CcccHHHHHHHHH
Confidence            56889999999998754   57999999999999999999988775432211       1111111 122445555 589


Q ss_pred             hcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Ccccccccc--ChhHHHHH
Q 035566          157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALE--NIHNIREA  210 (238)
Q Consensus       157 ~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~--~~~el~~~  210 (238)
                      +++++|++|++|||+.+|+.+|+.+|+..+ ++.... ...|++++.  ++.++..+
T Consensus       163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~-~~~~~~~~~~a~~~i~~~~~~~~~~~  218 (219)
T TIGR00338       163 KEGISPENTVAVGDGANDLSMIKAAGLGIA-FNAKPKLQQKADICINKKDLTDILPL  218 (219)
T ss_pred             HcCCCHHHEEEEECCHHHHHHHHhCCCeEE-eCCCHHHHHhchhccCCCCHHHHHhh
Confidence            999999999999999999999999999754 443332 567889977  45666543

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.86  E-value=1.6e-21  Score=146.62  Aligned_cols=101  Identities=17%  Similarity=0.212  Sum_probs=83.2

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHH--HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIH--VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAH  160 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~--~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~  160 (238)
                      ..+++||+.++|+.|+.+   .+++||+....  ....+...++..+|+.+++++..+..||    .+.++.. ++++|+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP----~p~~~~~~~~~~g~  167 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKP----DPRIYQLMLERLGV  167 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCC----CHHHHHHHHHHcCC
Confidence            467899999999998754   57999986543  3333445678889999998888877776    7777775 899999


Q ss_pred             CCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      +|++|++|||+..|+.+|+++|+++|++.++
T Consensus       168 ~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       168 APEECVFLDDLGSNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             CHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence            9999999999999999999999999998764

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.84  E-value=4.2e-20  Score=137.58  Aligned_cols=101  Identities=21%  Similarity=0.326  Sum_probs=86.4

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHh-cCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ..++||+.++|+.++.+   .+|+||++.......+.. .++..+|+.++++++.+..||    ++.+|.. ++++|++|
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP----~p~~~~~~~~~~~~~p  158 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKP----EARIYQHVLQAEGFSA  158 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCC----CHHHHHHHHHHcCCCh
Confidence            35789999999998654   689999987776655544 478889999999999988886    7877775 89999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|++|||+..|+.+|+++|++++++..+.
T Consensus       159 ~~~l~vgD~~~di~aA~~aG~~~i~~~~~~  188 (199)
T PRK09456        159 ADAVFFDDNADNIEAANALGITSILVTDKQ  188 (199)
T ss_pred             hHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence            999999999999999999999999997754

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.83  E-value=9.4e-20  Score=135.53  Aligned_cols=88  Identities=17%  Similarity=0.177  Sum_probs=73.2

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      .+.++..++|+.|+.   +.+|+||++...+..+++++|+..+|+.++++++... ||    ++..+. +++++|++|++
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP----~p~~~~~~~~~~~~~~~~  180 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KP----NPEPLILAAKALGVEACH  180 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-Cc----CHHHHHHHHHHhCcCccc
Confidence            344455777777754   4689999999999999999999999999998887665 65    565555 58999999999


Q ss_pred             EEEEeCCccchhHHHhc
Q 035566          165 RLFFDDSTRNIECGKSI  181 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~  181 (238)
                      |++|||+.+|+.+|+++
T Consensus       181 ~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       181 AAMVGDTVDDIITGRKA  197 (197)
T ss_pred             EEEEeCCHHHHHHHHhC
Confidence            99999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.82  E-value=1.7e-19  Score=128.98  Aligned_cols=150  Identities=22%  Similarity=0.262  Sum_probs=102.3

Q ss_pred             EEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCCC
Q 035566            6 CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPY   85 (238)
Q Consensus         6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (238)
                      +|+||+||||+|+...+..++.+     ..++++.+...       +....|.....+...     ...+.+.. .  ..
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~g~~~~~~~~~-----~~~~~~~~-~--~~   60 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEE-----TLEEFGEDFQA-------LKALRGLAEELLYRI-----ATSFEELL-G--YD   60 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHH-----HHHHhcccHHH-------HHHHHccChHHHHHH-----HHHHHHHh-C--cc
Confidence            48999999999976666666664     33445543222       111122221111110     01122211 1  11


Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      .....+||+.++|+.|+.+   .+++||+....+...++++ +..+|+.+++.++.. .||    .+.++. +++++|++
T Consensus        61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp----~~~~~~~~~~~~~~~  134 (154)
T TIGR01549        61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKP----EPEIFLAALESLGLP  134 (154)
T ss_pred             hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCc----CHHHHHHHHHHcCCC
Confidence            2345679999999988543   6799999999999999987 788899988877766 665    566665 58999999


Q ss_pred             CCeEEEEeCCccchhHHHhcC
Q 035566          162 FFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G  182 (238)
                      | +|++|||+..|+.+|+++|
T Consensus       135 ~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       135 P-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             C-CEEEEeCCHHHHHHHHHcc
Confidence            9 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>PRK06769 hypothetical protein; Validated

Probab=99.82  E-value=8.2e-20  Score=132.53  Aligned_cols=120  Identities=16%  Similarity=0.166  Sum_probs=89.0

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChH--------HHHHHHHhcCcccccceee-ecccCCCCCCCCCchHHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEI--------HVAKVLRKLGLEDCFDGIV-NFESLNPTNKTTGQELQLISM-  154 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~--------~~~~~l~~~~~~~~f~~i~-~~~~~~~~k~~~~~~~~~~~~-  154 (238)
                      +.++||+.++|+.|+.+   .+|+||+...        .....++.+|+..+|.... ..+.....||    .+.++.. 
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP----~p~~~~~~  102 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKP----STGMLLQA  102 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCC----CHHHHHHH
Confidence            35679999999988654   6799997641        2344466777655443332 2333445555    7766664 


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------------CccccccccChhHHHHHh
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------------TKGADYALENIHNIREAF  211 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------------~~~ad~v~~~~~el~~~l  211 (238)
                      +++++++|++|++|||+..|+.+|+++|+.+|++.++..            ...+++++.++.||.+++
T Consensus       103 ~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l  171 (173)
T PRK06769        103 AEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI  171 (173)
T ss_pred             HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence            899999999999999999999999999999999987642            235889999999998754

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.82  E-value=4.1e-20  Score=135.01  Aligned_cols=87  Identities=18%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeE
Q 035566           87 NLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQR  165 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~  165 (238)
                      .++++||+.++|+    +.+|+||++...+...++++|+..+|+.+++++..+..||    .+.+|.. ++++|++|++|
T Consensus        88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP----~p~~f~~~~~~~~~~p~~~  159 (175)
T TIGR01493        88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKP----DPVVYELVFDTVGLPPDRV  159 (175)
T ss_pred             cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCC----CHHHHHHHHHHHCCCHHHe
Confidence            4678999999999    3689999999999999999999999999999888888876    7877775 89999999999


Q ss_pred             EEEeCCccchhHHHhc
Q 035566          166 LFFDDSTRNIECGKSI  181 (238)
Q Consensus       166 v~vgD~~~di~~a~~~  181 (238)
                      ++|||+..|+.+|+++
T Consensus       160 l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       160 LMVAAHQWDLIGARKF  175 (175)
T ss_pred             EeEecChhhHHHHhcC
Confidence            9999999999999863

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN02811 hydrolase

Probab=99.81  E-value=9.5e-20  Score=137.75  Aligned_cols=118  Identities=19%  Similarity=0.238  Sum_probs=94.5

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHH-HHHhcCcccccceeeecc--cCCCCCCCCCchHHHHHH-HHhcC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAK-VLRKLGLEDCFDGIVNFE--SLNPTNKTTGQELQLISM-LRMVA  159 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~-~l~~~~~~~~f~~i~~~~--~~~~~k~~~~~~~~~~~~-~~~~~  159 (238)
                      ...++||+.++|+.|+..   .+|+||+....... ..+..++.++|+.+++++  +....||    .+.++.. +++++
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP----~p~~~~~a~~~~~  151 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKP----APDIFLAAARRFE  151 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCC----CcHHHHHHHHHhC
Confidence            467899999999988654   57999987765543 344457888999999888  6666665    7777775 78886


Q ss_pred             ---CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHH
Q 035566          160 ---HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIR  208 (238)
Q Consensus       160 ---~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~  208 (238)
                         ++|++|++|||+..|+++|+++|+++|++.++..    ...++++++++.|+.
T Consensus       152 ~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~  207 (220)
T PLN02811        152 DGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK  207 (220)
T ss_pred             CCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence               9999999999999999999999999999977642    346788888888754

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.81  E-value=6.5e-19  Score=129.16  Aligned_cols=119  Identities=18%  Similarity=0.223  Sum_probs=90.8

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccccceeeecc-----cCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNFE-----SLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~~-----~~~~~k~~  144 (238)
                      +.++||+.++|+.|+.+   .+|+||+..               ..+...++++|+  .|+.++.+.     .....|| 
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP-  104 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKP-  104 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCC-
Confidence            45679999999988755   579998762               334456667776  377766543     2344554 


Q ss_pred             CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----Cccc--cccccChhHHHHHhH
Q 035566          145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGA--DYALENIHNIREAFP  212 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~a--d~v~~~~~el~~~l~  212 (238)
                         .+.++.. ++.+|++|+++++|||+.+|+.+|+++|+.++++.++..     ...+  ++++.++.++.+++.
T Consensus       105 ---~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~  177 (181)
T PRK08942        105 ---KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK  177 (181)
T ss_pred             ---CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence               7777765 899999999999999999999999999999999977642     3345  899999999988764

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.81  E-value=4.5e-19  Score=132.78  Aligned_cols=190  Identities=14%  Similarity=0.103  Sum_probs=116.3

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHH--HHHHHhhccchhhhhhccCCCChHhHHHhhhC
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFN--RVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHG   81 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (238)
                      |++|+|||||||++      ..+.     .+.+.+|.+.... ...  ..+...++.....+.  ....+.+++....  
T Consensus         1 ~~~v~FD~DGTL~~------~~~~-----~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~~~~--   64 (205)
T PRK13582          1 MEIVCLDLEGVLVP------EIWI-----AFAEKTGIPELRA-TTRDIPDYDVLMKQRLDILD--EHGLGLADIQEVI--   64 (205)
T ss_pred             CeEEEEeCCCCChh------hHHH-----HHHHHcCChHHHH-HhcCCCCHHHHHHHHHHHHH--HcCCCHHHHHHHH--
Confidence            48899999999994      2222     2445566643210 000  001111111111111  1223344444333  


Q ss_pred             CCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccC----CCCCCCCCchHHHHHHH
Q 035566           82 RLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----NPTNKTTGQELQLISML  155 (238)
Q Consensus        82 ~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~~~k~~~~~~~~~~~~~  155 (238)
                          ...+++||+.++|+.++.  +.+++|++....+...++++|+..+|...+.....    +..++.+.+.   ...+
T Consensus        65 ----~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k---~~~l  137 (205)
T PRK13582         65 ----ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGK---RQAV  137 (205)
T ss_pred             ----HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchH---HHHH
Confidence                235778999999998864  46799999999999999999998888654433211    1111111112   2334


Q ss_pred             HhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc-cccChhHHHHHhHHhhhc
Q 035566          156 RMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY-ALENIHNIREAFPELWDA  217 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~-v~~~~~el~~~l~~~~~~  217 (238)
                      ++++..++++++|||+.+|+.+++.+|+.. .++.+..  ...+++ +++++.||..++.+...+
T Consensus       138 ~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~  201 (205)
T PRK13582        138 KALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQFPAVHTYDELLAAIDKASAR  201 (205)
T ss_pred             HHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence            556666789999999999999999999854 4554432  234555 899999999888776543

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.81  E-value=8.7e-19  Score=130.84  Aligned_cols=105  Identities=12%  Similarity=0.090  Sum_probs=81.0

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC------Cch-HHHHHHHHh
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT------GQE-LQLISMLRM  157 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~------~~~-~~~~~~~~~  157 (238)
                      .+++||+.++|+.++.+   .+|+|++....+..+++++|+..+|...+.++..+..+|.+      .++ ..+..++++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            57889999999998654   57999999999999999999988877666554444333321      122 234455788


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +|++++++++|||+.+|+.+++.+|+.++..+.+.
T Consensus       159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            99999999999999999999999999766655444

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02954 phosphoserine phosphatase

Probab=99.79  E-value=8.1e-18  Score=127.70  Aligned_cols=192  Identities=17%  Similarity=0.232  Sum_probs=112.2

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh-hhh-cc-CCCChHhHHHh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG-LKA-VG-YDFDNDDYHSF   78 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~   78 (238)
                      +++|+|+||+||||+++ ..    +.     .+.+.+|.+.... .+...+.. ....... +.. .. .....+.+.+.
T Consensus        10 ~~~k~viFDfDGTL~~~-~~----~~-----~~~~~~g~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~   77 (224)
T PLN02954         10 RSADAVCFDVDSTVCVD-EG----ID-----ELAEFCGAGEAVA-EWTAKAMG-GSVPFEEALAARLSLFKPSLSQVEEF   77 (224)
T ss_pred             ccCCEEEEeCCCcccch-HH----HH-----HHHHHcCChHHHH-HHHHHHHC-CCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence            35799999999999994 22    11     2555566542221 11111111 0011111 100 00 11123333333


Q ss_pred             hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceeeecc--------cCCCCCCCC
Q 035566           79 VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIVNFE--------SLNPTNKTT  145 (238)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~~~~--------~~~~~k~~~  145 (238)
                      +..    ....++||+.++|+.++.+   .+|+|++....+..+++.+|+.  .+|...+..+        .........
T Consensus        78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~  153 (224)
T PLN02954         78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRS  153 (224)
T ss_pred             HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCC
Confidence            322    1245789999999988654   5799999999999999999986  3554322111        110000111


Q ss_pred             CchHH-HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHh
Q 035566          146 GQELQ-LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAF  211 (238)
Q Consensus       146 ~~~~~-~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l  211 (238)
                      ++++. +..+++++|.  +++++|||+.+|+.+++.+|+..+....+..     ...++++++++.+|.+++
T Consensus       154 ~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~  223 (224)
T PLN02954        154 GGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL  223 (224)
T ss_pred             ccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence            22334 4445677775  6899999999999999998887654332211     345899999999987754

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.79  E-value=1.3e-18  Score=126.93  Aligned_cols=116  Identities=16%  Similarity=0.204  Sum_probs=88.5

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccccceeeecc-----------cC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNFE-----------SL  138 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~~-----------~~  138 (238)
                      +.++||+.++|+.|+.+   .+++||++.               ..+...+..+++.  |+.++.+.           ..
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~  102 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC  102 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence            45678999999998755   579999874               3444566666665  67766543           22


Q ss_pred             CCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC-----CccccccccChhHHHH
Q 035566          139 NPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR-----TKGADYALENIHNIRE  209 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~-----~~~ad~v~~~~~el~~  209 (238)
                      ...|    |.+.++.. ++++|++|++++||||+..|+++|+++|+.+ +++.++..     ...|+++++++.||.+
T Consensus       103 ~~~K----P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~~  176 (176)
T TIGR00213       103 DCRK----PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLPQ  176 (176)
T ss_pred             CCCC----CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhhC
Confidence            2344    47777775 8999999999999999999999999999998 78887753     2458999999999853

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.78  E-value=1.7e-18  Score=128.21  Aligned_cols=191  Identities=16%  Similarity=0.185  Sum_probs=131.6

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChHhHHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDNDDYHS   77 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   77 (238)
                      .+.+++||+||||+|++..+...+..     +..++|.......     .....|....+..     ......+.+++..
T Consensus         9 ~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~-----~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~   78 (222)
T KOG2914|consen    9 KVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDV-----KVKSMGKRTSEAARLFVKKLPDPVSREEFNK   78 (222)
T ss_pred             ceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHH-----HHHHcCCCHHHHHHHHHhhcCCCCCHHHHHH
Confidence            47899999999999976655555553     6667776433311     1112233222211     1123455555554


Q ss_pred             hhhCCC--CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcC-cccccceeee--cccCCCCCCCCCchH
Q 035566           78 FVHGRL--PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLG-LEDCFDGIVN--FESLNPTNKTTGQEL  149 (238)
Q Consensus        78 ~~~~~~--~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~-~~~~f~~i~~--~~~~~~~k~~~~~~~  149 (238)
                      ......  ........||+.+++++|+..   .+++|++++.......++++ +-..|+.++.  ...+...    ||.+
T Consensus        79 e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~g----KP~P  154 (222)
T KOG2914|consen   79 EEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNG----KPDP  154 (222)
T ss_pred             HHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCC----CCCc
Confidence            433221  113567889999999999765   57999999998888888877 6677877666  3334344    4588


Q ss_pred             HHHHH-HHhcCCCC-CeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHH
Q 035566          150 QLISM-LRMVAHHF-FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNI  207 (238)
Q Consensus       150 ~~~~~-~~~~~~~~-~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el  207 (238)
                      ++|.. ++.+|.+| +.|++|+|++..+++|+++||++|+++....    ...++.+++++.+.
T Consensus       155 di~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T KOG2914|consen  155 DIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF  218 (222)
T ss_pred             hHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence            88887 79999988 9999999999999999999999999988442    45566666665543

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.78  E-value=2.5e-18  Score=129.90  Aligned_cols=128  Identities=13%  Similarity=0.107  Sum_probs=88.5

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc--cc--ceeeecccCCCCCCCCCch-------HHHH
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED--CF--DGIVNFESLNPTNKTTGQE-------LQLI  152 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~--~f--~~i~~~~~~~~~k~~~~~~-------~~~~  152 (238)
                      ..+++||+.++|+.++.+   .+|+|++....+..+++++ +..  .+  +..+..+.....+|.+...       ..-.
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~  150 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP  150 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence            367899999999888654   5799999999999999987 543  22  2233333333333311100       0012


Q ss_pred             HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecC--CC--CCccccccccChhHHHHHhHHhhh
Q 035566          153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGT--SR--RTKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~--~~--~~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      .+++.++..++++++|||+.+|+.+|+.+|+..+ -..  ..  ....+.+.++++.|+.+.+.+++.
T Consensus       151 ~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~  217 (219)
T PRK09552        151 SLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETFHDVQTELKHLLE  217 (219)
T ss_pred             HHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCHHHHHHHHHHHhc
Confidence            3568888999999999999999999999999433 111  00  244577888999999998888765

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.77  E-value=6e-18  Score=125.67  Aligned_cols=101  Identities=23%  Similarity=0.282  Sum_probs=86.9

Q ss_pred             CCCCChhHHHHHhcCCCCe---EEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIRK---VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~~---~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      .....+++.++++.++.++   .++||.+. ..+.++..+|+..+||.++.+...+..||    .+.+|+. ++++++.|
T Consensus       111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD~vv~S~e~g~~KP----Dp~If~~al~~l~v~P  185 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFDFVVESCEVGLEKP----DPRIFQLALERLGVKP  185 (237)
T ss_pred             CceeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhhhhhhhhhhccCCC----ChHHHHHHHHHhCCCh
Confidence            4566788889999998775   46777654 44588899999999999999999999997    9999997 89999999


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|++|||+. ||+++|+++||++++|.++.
T Consensus       186 ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~  216 (237)
T KOG3085|consen  186 EECVHIGDLLENDYEGARNLGWHAILVDNSI  216 (237)
T ss_pred             HHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence            9999999996 55999999999999997665

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.76  E-value=9.1e-18  Score=132.46  Aligned_cols=121  Identities=17%  Similarity=0.153  Sum_probs=86.1

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-------eeecccCC---CCCCCCCchHHHHH
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-------IVNFESLN---PTNKTTGQELQLIS  153 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-------i~~~~~~~---~~k~~~~~~~~~~~  153 (238)
                      .++++||+.++++.++..   .+|+|++.......+.+++|+...+..       .+++...+   ..++   +...+.+
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~---K~~~L~~  255 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQY---KADTLTR  255 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCccc---HHHHHHH
Confidence            367899999999988754   579999998888888999988654432       12111111   1222   3344445


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccC--hhHHHHHh
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALEN--IHNIREAF  211 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~--~~el~~~l  211 (238)
                      +++++|+++++|++|||+.||+.|++.+|+..++ +..+. +..|++++++  ++.+.-++
T Consensus       256 la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~  315 (322)
T PRK11133        256 LAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL  315 (322)
T ss_pred             HHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence            6899999999999999999999999999997666 44333 6789988873  44444433

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.76  E-value=4e-17  Score=122.10  Aligned_cols=180  Identities=12%  Similarity=0.060  Sum_probs=113.6

Q ss_pred             eeEEEEecCCceeeCc---cchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHH----hhccchhhhhhccCCCC-hH--
Q 035566            4 YECLLFDVDDTLYSHS---YGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK----NYGTSMAGLKAVGYDFD-ND--   73 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~--   73 (238)
                      +++|+||+.||+++.+   ..+++...+.+..++.++..-+  ....+......    ..-.....+...+.... ..  
T Consensus         1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~l   78 (220)
T TIGR01691         1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST--IVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTL   78 (220)
T ss_pred             CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH--HHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHH
Confidence            5789999999999953   2345555566666665443222  11111110000    00000001111111111 11  


Q ss_pred             ---hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---CcccccceeeecccCCCCCCC
Q 035566           74 ---DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFESLNPTNKT  144 (238)
Q Consensus        74 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~k~~  144 (238)
                         .|.+.+...  ....+++||+.++|+.|+.+   .+|+||++...+...+++.   ++..+|+.++... .+ .|  
T Consensus        79 qg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~-~g-~K--  152 (220)
T TIGR01691        79 QGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT-VG-LK--  152 (220)
T ss_pred             HHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC-cc-cC--
Confidence               133333321  23457899999999999754   5799999988888888876   5667787766432 22 34  


Q ss_pred             CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                        +.+..|.. ++++|++|++++||||+..|+.+|+++|+.++++.++.+
T Consensus       153 --P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~  200 (220)
T TIGR01691       153 --TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN  200 (220)
T ss_pred             --CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence              47766664 899999999999999999999999999999999977653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.74  E-value=5.1e-18  Score=120.10  Aligned_cols=99  Identities=21%  Similarity=0.235  Sum_probs=73.6

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccc--cceeee-cccCCCCCCCCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDC--FDGIVN-FESLNPTNKTTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~--f~~i~~-~~~~~~~k~~~~~  147 (238)
                      .++||+.++|+.|+.+   .+|+||++.               ..+...++++|+...  |..... ++.....||    
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP----  102 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKP----  102 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCC----
Confidence            4678899999888755   579999863               456677888887621  111111 233334454    


Q ss_pred             hHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          148 ELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       148 ~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      .++++.. ++.++++|++|++|||+..|+++|+++|+++++++.+
T Consensus       103 ~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       103 KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            6776665 8999999999999999999999999999999999764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.74  E-value=2.1e-18  Score=123.84  Aligned_cols=103  Identities=17%  Similarity=0.151  Sum_probs=84.3

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecC-ChHHHHHHHHhcCcc---------cccceeeecccCCCCCCCCCchHHHH
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNA-DEIHVAKVLRKLGLE---------DCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~-~~~~~~~~l~~~~~~---------~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      ....++||+.++|+.|+.+   .+++||+ ....++..++.+++.         .+|+.+++++.....    ++.+.++
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----kp~~~i~  117 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----KQLEMIL  117 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH----HHHHHHH
Confidence            3467889999999999755   5799988 888889999999998         999999987753322    2355666


Q ss_pred             HHH-Hhc--CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          153 SML-RMV--AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       153 ~~~-~~~--~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +.+ +.+  |++|++|+||||++.|+.+|+.+|+.++++.++.
T Consensus       118 ~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       118 QKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             HHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            654 344  6999999999999999999999999999998865

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.74  E-value=2.3e-17  Score=124.30  Aligned_cols=97  Identities=12%  Similarity=0.114  Sum_probs=78.0

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecC----ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNA----DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVA  159 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~----~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~  159 (238)
                      ...+.+++.++|+.++.+   .+++||.    ....+..+++++|+..+|+.+++++.....||    .+.  .++++++
T Consensus       112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp----~~~--~~l~~~~  185 (237)
T TIGR01672       112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQY----TKT--QWIQDKN  185 (237)
T ss_pred             CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCC----CHH--HHHHhCC
Confidence            346677799999998765   5799998    66788888999999999999888776665444    332  3556677


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                      +    ++||||+.+|+.+|+++|+.++.+.++..
T Consensus       186 i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~  215 (237)
T TIGR01672       186 I----RIHYGDSDNDITAAKEAGARGIRILRASN  215 (237)
T ss_pred             C----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence            6    79999999999999999999999987763

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.73  E-value=8.3e-17  Score=119.39  Aligned_cols=189  Identities=12%  Similarity=0.109  Sum_probs=110.1

Q ss_pred             eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCC
Q 035566            5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP   84 (238)
Q Consensus         5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (238)
                      .+++|||||||++.      .|.     ++....|........-....+..+....-.+.. ..+.+.+.+.+...    
T Consensus         2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~-~~g~~~~~i~~~~~----   65 (203)
T TIGR02137         2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILD-EHGLKLGDIQEVIA----   65 (203)
T ss_pred             eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHH-HCCCCHHHHHHHHH----
Confidence            57999999999983      232     355566654322100000011111111111111 12445555544432    


Q ss_pred             CCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeeccc----CCCCCCCCCchHHHHHHHHhc
Q 035566           85 YENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES----LNPTNKTTGQELQLISMLRMV  158 (238)
Q Consensus        85 ~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~----~~~~k~~~~~~~~~~~~~~~~  158 (238)
                        .++++||+.++++.++.  +.+|+|++....+..+++++|++.+|..-...++    .+.....+..+......++..
T Consensus        66 --~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~  143 (203)
T TIGR02137        66 --TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  143 (203)
T ss_pred             --hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence              25688999999988864  4689999999999999999999887753222111    010000011233333334555


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcc-cc-ccccChhHHHHHhHHh
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKG-AD-YALENIHNIREAFPEL  214 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~-ad-~v~~~~~el~~~l~~~  214 (238)
                      +.   ++++|||+.||+.|++.+|.+.++...+.-... ++ .++.+++||...+...
T Consensus       144 ~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (203)
T TIGR02137       144 YY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA  198 (203)
T ss_pred             CC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence            53   799999999999999999987666555443222 33 4566788887766543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.71  E-value=1.2e-16  Score=111.15  Aligned_cols=94  Identities=20%  Similarity=0.266  Sum_probs=73.5

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCC--------hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHH
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNAD--------EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLR  156 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~  156 (238)
                      .++|++.++|+.|+.   +.+++||+.        ...+...++++++.  ++..+.+.  ...||    .+++++ +++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP----~~~~~~~~~~   96 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKP----KPGMFLEALK   96 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCC----ChHHHHHHHH
Confidence            456888888887764   467999998        77888899999986  34444333  34454    666665 589


Q ss_pred             hc-CCCCCeEEEEeC-CccchhHHHhcCCeEEEecC
Q 035566          157 MV-AHHFFQRLFFDD-STRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       157 ~~-~~~~~~~v~vgD-~~~di~~a~~~G~~~i~v~~  190 (238)
                      ++ +++|+++++||| +..|+.+|+++|+.+|+++.
T Consensus        97 ~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        97 RFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             HcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence            99 599999999999 79999999999999999863

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.69  E-value=1.1e-16  Score=119.37  Aligned_cols=187  Identities=17%  Similarity=0.215  Sum_probs=114.6

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHH--hhccchhhhhhccCCCChHhHHHhh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK--NYGTSMAGLKAVGYDFDNDDYHSFV   79 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   79 (238)
                      +++++++|||||||++      ...+.    .+....|............+..  .+..........-...+.+...+..
T Consensus         3 ~~~~L~vFD~D~TLi~------~~~~~----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~   72 (212)
T COG0560           3 RMKKLAVFDLDGTLIN------AELID----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVR   72 (212)
T ss_pred             CccceEEEecccchhh------HHHHH----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHH
Confidence            3578999999999999      22221    3444555544332221111111  1111111111111223333333322


Q ss_pred             hCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc---CC----CCCCCCCchH
Q 035566           80 HGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES---LN----PTNKTTGQEL  149 (238)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~---~~----~~k~~~~~~~  149 (238)
                      .+ .    .+.+|++.++++.++..   .+|+|+++...+.++.+.+|++..+...+...+   .+    ..-....|..
T Consensus        73 ~~-~----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~  147 (212)
T COG0560          73 EE-F----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK  147 (212)
T ss_pred             Hh-c----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence            21 1    67789999999888765   579999999999999999999987766554443   11    1111123456


Q ss_pred             HHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccCh
Q 035566          150 QLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENI  204 (238)
Q Consensus       150 ~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~  204 (238)
                      .+.++++.+|+++++++++|||.||+.|...+|.+ +.++..+. ...++......
T Consensus       148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~-ia~n~~~~l~~~a~~~~~~~  202 (212)
T COG0560         148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLP-IAVNPKPKLRALADVRIWPI  202 (212)
T ss_pred             HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCC-eEeCcCHHHHHHHHHhcChh
Confidence            66678999999999999999999999999999975 55544432 44444444443

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.69  E-value=8.5e-17  Score=114.89  Aligned_cols=99  Identities=15%  Similarity=0.254  Sum_probs=80.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCC---------------hHHHHHHHHhcCcccccceeee-----cccCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNAD---------------EIHVAKVLRKLGLEDCFDGIVN-----FESLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~---------------~~~~~~~l~~~~~~~~f~~i~~-----~~~~~~~k~~  144 (238)
                      ++++||+.++|+.|+.+   .+|+||.+               ...+..+++.+|+.  |+.++.     +++....|| 
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP-  104 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKP-  104 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCC-
Confidence            46789999999998754   57999963               45677889999997  776554     355666665 


Q ss_pred             CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                         .+.++.. +++++++|++++||||+.+|+.+|+.+|++++++.++.
T Consensus       105 ---~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       105 ---KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             ---CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence               6666664 89999999999999999999999999999999998875

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.69  E-value=9e-17  Score=123.89  Aligned_cols=120  Identities=11%  Similarity=0.062  Sum_probs=90.1

Q ss_pred             ChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEE
Q 035566           91 DPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRL  166 (238)
Q Consensus        91 ~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v  166 (238)
                      ++++.+.++.++..   .++.||.+.......+..+|...+|+.+......... ..+||.+.++.. +++++++|++++
T Consensus       122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~-~~gKP~p~~~~~~~~~~~~~~~~~~  200 (257)
T TIGR01458       122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKAT-VVGKPSKTFFLEALRATGCEPEEAV  200 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCce-eecCCCHHHHHHHHHHhCCChhhEE
Confidence            56777777776533   4788888776665566677888888777654433221 112457777775 789999999999


Q ss_pred             EEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566          167 FFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF  211 (238)
Q Consensus       167 ~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l  211 (238)
                      ||||+. +|+.+|+++|+.++++.+|..        ...++++++++.||.+++
T Consensus       201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l  254 (257)
T TIGR01458       201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI  254 (257)
T ss_pred             EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence            999996 899999999999999988741        345899999999998764

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.66  E-value=4.5e-16  Score=110.78  Aligned_cols=111  Identities=19%  Similarity=0.215  Sum_probs=85.8

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN  174 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d  174 (238)
                      .+.|+.-..+.+|+||.+...+...++++|+..+|+..         ++   +...+..+++++|+++++|++|||+.+|
T Consensus        37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~---------~~---k~~~~~~~~~~~~~~~~~~~~vGDs~~D  104 (154)
T TIGR01670        37 IRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ---------SN---KLIAFSDILEKLALAPENVAYIGDDLID  104 (154)
T ss_pred             HHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc---------cc---hHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence            34444444567899999999999999999988776521         22   3445555689999999999999999999


Q ss_pred             hhHHHhcCCeEEEecCCCC--CccccccccChhH---HHHHhHHhhhcc
Q 035566          175 IECGKSIGLHTVLVGTSRR--TKGADYALENIHN---IREAFPELWDAD  218 (238)
Q Consensus       175 i~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e---l~~~l~~~~~~~  218 (238)
                      +.+++.+|+. +++.+...  ...+++++.+...   +.+++++++...
T Consensus       105 ~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~  152 (154)
T TIGR01670       105 WPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLAQ  152 (154)
T ss_pred             HHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHhh
Confidence            9999999996 77765543  6668999987754   888888777654

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.66  E-value=2.6e-16  Score=119.97  Aligned_cols=106  Identities=16%  Similarity=0.202  Sum_probs=71.5

Q ss_pred             EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      +.++.....+...++.++..  +..+.+.......+++..+...+..+++.+|++++++++|||+.||++|++.+|+..+
T Consensus       120 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va  197 (230)
T PRK01158        120 LRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA  197 (230)
T ss_pred             ecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE
Confidence            33444445566666665431  2222222223444455556777888899999999999999999999999999998654


Q ss_pred             EecCCCC-CccccccccChhH--HHHHhHHh
Q 035566          187 LVGTSRR-TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       187 ~v~~~~~-~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      +-+..+. +..|++++.+.++  +.+.|.++
T Consensus       198 m~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~  228 (230)
T PRK01158        198 VANADEELKEAADYVTEKSYGEGVAEAIEHL  228 (230)
T ss_pred             ecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence            4444333 6778999987666  66666554

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.65  E-value=4.4e-16  Score=111.65  Aligned_cols=112  Identities=17%  Similarity=0.178  Sum_probs=84.5

Q ss_pred             HHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccch
Q 035566           96 NLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNI  175 (238)
Q Consensus        96 ~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di  175 (238)
                      ..|+....+.+|+||.+...+...++.+|+..+|+.+         ||   +...+..++++++++++++++|||+.||+
T Consensus        44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kp---kp~~~~~~~~~l~~~~~ev~~iGD~~nDi  111 (169)
T TIGR02726        44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KK---KTEPYAQMLEEMNISDAEVCYVGDDLVDL  111 (169)
T ss_pred             HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CC---CHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence            4455556778999999999999999999998887632         33   23345556899999999999999999999


Q ss_pred             hHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhccc
Q 035566          176 ECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDADE  219 (238)
Q Consensus       176 ~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~~  219 (238)
                      .|++.+|+..+.-+.... +..|++++.+..+   +.+++..+++..+
T Consensus       112 ~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~~  159 (169)
T TIGR02726       112 SMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAELILKAQG  159 (169)
T ss_pred             HHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence            999999997665555443 6678888764332   4566666666554

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.64  E-value=8.4e-16  Score=107.35  Aligned_cols=103  Identities=23%  Similarity=0.287  Sum_probs=80.6

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC------------CchHH
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT------------GQELQ  150 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~------------~~~~~  150 (238)
                      ....+++++.++|+.++.+   .+++|++....+...++.+++..+++.+++........+..            ++.+.
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD  100 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence            4467788999998888654   67999999999999999999988888888766544331100            23444


Q ss_pred             HHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEe
Q 035566          151 LIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       151 ~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      .+. +.++++.+++++++|||+.+|+.+++.+|++++++
T Consensus       101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            444 58888998999999999999999999999998874

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.64  E-value=6.4e-15  Score=108.74  Aligned_cols=94  Identities=13%  Similarity=0.166  Sum_probs=69.7

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC----------------CCCCCCCch
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN----------------PTNKTTGQE  148 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~----------------~~k~~~~~~  148 (238)
                      .+++||+.++|+.++.+   .+++||+....++..++++|+..+|+.+++++...                ...+.+..+
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            57889999999888644   67999999999999999999999999888654311                001111223


Q ss_pred             HHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCe
Q 035566          149 LQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLH  184 (238)
Q Consensus       149 ~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~  184 (238)
                      +.+++. .+..   ++++++|||+.+|+.+|+.+++.
T Consensus       151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence            445444 3332   78999999999999999999753

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.64  E-value=5.5e-16  Score=121.20  Aligned_cols=114  Identities=19%  Similarity=0.177  Sum_probs=81.7

Q ss_pred             CChhHHHHHhcCCCC--eEEEecCChHHHH-HHHHhcCcccccceeeec---ccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           90 PDPVLRNLLLSLPIR--KVIFSNADEIHVA-KVLRKLGLEDCFDGIVNF---ESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~--~~i~t~~~~~~~~-~~l~~~~~~~~f~~i~~~---~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      .++++.++++.++.+  .+++||.+..... ..+...+...+|+.+...   ......|    |.+.++.. ++++|++|
T Consensus       144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gK----P~p~~~~~~~~~~~~~~  219 (279)
T TIGR01452       144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGK----PSPYMFECITENFSIDP  219 (279)
T ss_pred             CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCC----CCHHHHHHHHHHhCCCh
Confidence            378899999988754  4688887754321 223344555666655432   2222334    47777665 88999999


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------------CccccccccChhHH
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------------TKGADYALENIHNI  207 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------------~~~ad~v~~~~~el  207 (238)
                      ++++||||+. .||.+|+++|+++++|.+|..              ..+||++++++.||
T Consensus       220 ~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l  279 (279)
T TIGR01452       220 ARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL  279 (279)
T ss_pred             hhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence            9999999995 999999999999999988752              13588999888764

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.63  E-value=2.5e-15  Score=108.05  Aligned_cols=92  Identities=17%  Similarity=0.211  Sum_probs=70.1

Q ss_pred             CChhHHHHHhcCCCC---eEEEecCChH------------HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-
Q 035566           90 PDPVLRNLLLSLPIR---KVIFSNADEI------------HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~---~~i~t~~~~~------------~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-  153 (238)
                      ++||+.++|+.|+.+   .+|+||++..            .+..+++++|+.  ++.+++++.....||    .+.++. 
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP----~p~~~~~  116 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKP----MTGMWEY  116 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCC----ccHHHHH
Confidence            578999999888654   5799997653            467788999985  355555554444454    555555 


Q ss_pred             HHHhcC--CCCCeEEEEeCCc--------cchhHHHhcCCeEEE
Q 035566          154 MLRMVA--HHFFQRLFFDDST--------RNIECGKSIGLHTVL  187 (238)
Q Consensus       154 ~~~~~~--~~~~~~v~vgD~~--------~di~~a~~~G~~~i~  187 (238)
                      +++++|  +++++++||||+.        +|+++|+++|+.+++
T Consensus       117 ~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       117 LQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            588998  9999999999996        699999999998764

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.63  E-value=1.9e-15  Score=118.11  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=56.5

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELW  215 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~  215 (238)
                      ++..+...+..+++.+|++++++++|||+.||++|++.+|+. +.++++.+  +..|++++.+.++  +.++|.+++
T Consensus       196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~-vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~  271 (272)
T PRK10530        196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLG-VAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV  271 (272)
T ss_pred             CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCce-EEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence            333456677778999999999999999999999999999984 45544443  6679999988776  777776653

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.61  E-value=5.2e-15  Score=111.36  Aligned_cols=126  Identities=11%  Similarity=0.096  Sum_probs=83.5

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc---ceeeecccCCCCCCCCCch-------HHHHHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF---DGIVNFESLNPTNKTTGQE-------LQLISM  154 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~~~k~~~~~~-------~~~~~~  154 (238)
                      .+++||+.++++.++.+   .+|+|++....+..+++.++....+   +..+..+.....+|.....       ..-..+
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            57889999999988654   6799999999999999887543333   2233333333333311000       000134


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC-----CCCccccccccChhHHHHHhHHhh
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS-----RRTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~-----~~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      ++.++..++++++|||+.+|+.+|+.+|+  +.+...     .....+...++++.|+.+.|.+.+
T Consensus       149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~  212 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELENVK  212 (214)
T ss_pred             HHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence            56666678899999999999999999998  333221     123346677889999988887655

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PLN02645 phosphoglycolate phosphatase

Probab=99.61  E-value=1.4e-15  Score=120.46  Aligned_cols=108  Identities=15%  Similarity=0.091  Sum_probs=80.1

Q ss_pred             CCeEEEecCChHH-HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHH
Q 035566          103 IRKVIFSNADEIH-VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGK  179 (238)
Q Consensus       103 ~~~~i~t~~~~~~-~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~  179 (238)
                      ...+|+||.+... ....+...|...+|+.+......... -.+||.+.++.. ++++++++++++||||+. +|+.+|+
T Consensus       187 g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~-~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~  265 (311)
T PLN02645        187 GCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPL-VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQ  265 (311)
T ss_pred             CCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcc-cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHH
Confidence            3467899887643 22334556777778877665543321 123458887775 789999999999999997 9999999


Q ss_pred             hcCCeEEEecCCCC----------CccccccccChhHHHHHh
Q 035566          180 SIGLHTVLVGTSRR----------TKGADYALENIHNIREAF  211 (238)
Q Consensus       180 ~~G~~~i~v~~~~~----------~~~ad~v~~~~~el~~~l  211 (238)
                      ++|+++++|.+|..          ...|+++++++.+|.+++
T Consensus       266 ~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~  307 (311)
T PLN02645        266 NGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK  307 (311)
T ss_pred             HcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence            99999999987752          146899999999987754

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.58  E-value=1.8e-14  Score=108.63  Aligned_cols=109  Identities=15%  Similarity=0.164  Sum_probs=79.5

Q ss_pred             hHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecC----ChHHHHHHHHhcCc--ccccceeeecccCCCCC
Q 035566           72 NDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNA----DEIHVAKVLRKLGL--EDCFDGIVNFESLNPTN  142 (238)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~----~~~~~~~~l~~~~~--~~~f~~i~~~~~~~~~k  142 (238)
                      .+.|++++.+.. .....|+||+.++|+.++.+   .+++||.    .......+++.+|+  .++|+.+++.+..  .|
T Consensus        98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K  174 (237)
T PRK11009         98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQ  174 (237)
T ss_pred             hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CC
Confidence            344555555432 23467899999999998654   6799985    34566777778999  8888888776642  33


Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                      +    ..  ...++++++    +++|||+.+|+.+|+++|+.++.+.++..
T Consensus       175 ~----~K--~~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        175 Y----TK--TQWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             C----CH--HHHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            2    21  124556665    89999999999999999999999988763

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.57  E-value=4e-14  Score=112.58  Aligned_cols=109  Identities=17%  Similarity=0.260  Sum_probs=81.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecC---------------ChHHHHHHHHhcCcccccceeeec-----ccCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNA---------------DEIHVAKVLRKLGLEDCFDGIVNF-----ESLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~---------------~~~~~~~~l~~~~~~~~f~~i~~~-----~~~~~~k~~  144 (238)
                      ..++||+.++|+.|+.+   .+|+||.               ....+..+++.+++.  |+.++.+     +.....|| 
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP-  105 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKP-  105 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCC-
Confidence            57889999999988754   5799995               244566677888874  7766543     33344454 


Q ss_pred             CCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHh
Q 035566          145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAF  211 (238)
Q Consensus       145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l  211 (238)
                         .+.++. +++.++++|++++||||+.+|+++|+.+|+++++++...         -+|+++.+.|
T Consensus       106 ---~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~---------~~~~~i~~~l  161 (354)
T PRK05446        106 ---KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET---------LNWDAIAEQL  161 (354)
T ss_pred             ---CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC---------CCHHHHHHHH
Confidence               666665 578899999999999999999999999999999995532         3455666553

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.56  E-value=4.3e-14  Score=105.59  Aligned_cols=100  Identities=19%  Similarity=0.202  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-eeeccc-CCCCC---C--CC-CchHHHHHHHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-IVNFES-LNPTN---K--TT-GQELQLISMLR  156 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-i~~~~~-~~~~k---~--~~-~~~~~~~~~~~  156 (238)
                      ..++|++.++++.++.+   .+|+|++....+..+++++|+..+|.. +....+ .-..+   +  .+ .+...+.++++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            35789999999887654   579999999999999999999877655 222111 00000   0  11 12333555678


Q ss_pred             hcCCCCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566          157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       157 ~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~  187 (238)
                      +.++++++++++|||.+|+++++.+|...+.
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v  196 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVV  196 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence            8999999999999999999999999975443

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.55  E-value=7.2e-14  Score=102.15  Aligned_cols=94  Identities=23%  Similarity=0.259  Sum_probs=68.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC----C---C-CCCCC-CchHHHHHHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----N---P-TNKTT-GQELQLISML  155 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~---~-~k~~~-~~~~~~~~~~  155 (238)
                      ++++|++.++++.++.+   .+|+|++....+..+++++|+..+|...+.....    +   . ..+.+ .+...+.+++
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~  151 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL  151 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence            45789999999888654   5799999999999999999988776554433211    0   0 01111 2233444557


Q ss_pred             HhcCCCCCeEEEEeCCccchhHHHhc
Q 035566          156 RMVAHHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~~~di~~a~~~  181 (238)
                      +.++++++++++|||+.+|+.|++.+
T Consensus       152 ~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       152 EESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            88899999999999999999998764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.55  E-value=8.7e-15  Score=107.22  Aligned_cols=101  Identities=18%  Similarity=0.285  Sum_probs=76.4

Q ss_pred             HhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhH
Q 035566           98 LLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIEC  177 (238)
Q Consensus        98 l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~  177 (238)
                      |+.-....+|+|+.+...+...++.+|+..+|..         .++   +...+..+++++|+++++++||||+.+|+.+
T Consensus        60 L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~---k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~  127 (183)
T PRK09484         60 LLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSN---KLIAFSDLLEKLAIAPEQVAYIGDDLIDWPV  127 (183)
T ss_pred             HHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCc---HHHHHHHHHHHhCCCHHHEEEECCCHHHHHH
Confidence            3333455789999999999999999998776641         111   2455666799999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCC--Ccccccccc------ChhHHHHHh
Q 035566          178 GKSIGLHTVLVGTSRR--TKGADYALE------NIHNIREAF  211 (238)
Q Consensus       178 a~~~G~~~i~v~~~~~--~~~ad~v~~------~~~el~~~l  211 (238)
                      ++.+|+.. .+++..+  +..+++++.      .+.|+.+++
T Consensus       128 a~~aG~~~-~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i  168 (183)
T PRK09484        128 MEKVGLSV-AVADAHPLLLPRADYVTRIAGGRGAVREVCDLL  168 (183)
T ss_pred             HHHCCCeE-ecCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence            99999984 4554432  556899986      567776554

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.54  E-value=6.5e-15  Score=111.84  Aligned_cols=97  Identities=16%  Similarity=0.170  Sum_probs=65.9

Q ss_pred             EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      +.+..........++.++..  +.............+...+...+..+++++|++++++++|||+.||+.|++.+|+. +
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-v  188 (225)
T TIGR01482       112 MRYGIDVDTVREIIKELGLN--LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-V  188 (225)
T ss_pred             EeecCCHHHHHHHHHhcCce--EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-E
Confidence            44444556666677776643  11111111223333444567777778999999999999999999999999999985 5


Q ss_pred             EecCCCC--CccccccccChhH
Q 035566          187 LVGTSRR--TKGADYALENIHN  206 (238)
Q Consensus       187 ~v~~~~~--~~~ad~v~~~~~e  206 (238)
                      .+.++.+  +..|++|+.+..+
T Consensus       189 am~Na~~~~k~~A~~vt~~~~~  210 (225)
T TIGR01482       189 AVANAQPELKEWADYVTESPYG  210 (225)
T ss_pred             EcCChhHHHHHhcCeecCCCCC
Confidence            5544443  6788999877655

catalyze the same reaction as SPP.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.54  E-value=5.9e-14  Score=109.51  Aligned_cols=77  Identities=13%  Similarity=0.113  Sum_probs=61.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPE  213 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~  213 (238)
                      .....++..+..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+  +..|++|+.+.++  +...|.+
T Consensus       188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~  266 (270)
T PRK10513        188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG-VAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK  266 (270)
T ss_pred             EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce-EEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence            34555666778888889999999999999999999999999999985 55544443  7789999988766  7777766


Q ss_pred             hh
Q 035566          214 LW  215 (238)
Q Consensus       214 ~~  215 (238)
                      ++
T Consensus       267 ~~  268 (270)
T PRK10513        267 YV  268 (270)
T ss_pred             Hh
Confidence            54

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.53  E-value=1.9e-14  Score=110.62  Aligned_cols=114  Identities=12%  Similarity=0.097  Sum_probs=71.5

Q ss_pred             CChhHHHHHhcCCC-CeEEEecCChHHHHHHHHhcCcc---cccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCe
Q 035566           90 PDPVLRNLLLSLPI-RKVIFSNADEIHVAKVLRKLGLE---DCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQ  164 (238)
Q Consensus        90 ~~~~~~~~l~~l~~-~~~i~t~~~~~~~~~~l~~~~~~---~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~  164 (238)
                      .++.+...+..++. ..+++||.+......-....+-.   ..+....+.+.....|    |.+.+++. ++.+++++++
T Consensus       122 ~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gK----P~~~~~~~~~~~~~~~~~~  197 (249)
T TIGR01457       122 DYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGK----PNAIIMEKAVEHLGTEREE  197 (249)
T ss_pred             CHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCC----ChHHHHHHHHHHcCCCccc
Confidence            34555555554432 24677776553221100001111   1122223333333344    58888776 7899999999


Q ss_pred             EEEEeCCc-cchhHHHhcCCeEEEecCCCC------C--ccccccccChhHH
Q 035566          165 RLFFDDST-RNIECGKSIGLHTVLVGTSRR------T--KGADYALENIHNI  207 (238)
Q Consensus       165 ~v~vgD~~-~di~~a~~~G~~~i~v~~~~~------~--~~ad~v~~~~~el  207 (238)
                      +++|||+. .|+.+|+++|+++++|.++..      .  ..++++++++.++
T Consensus       198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~  249 (249)
T TIGR01457       198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW  249 (249)
T ss_pred             EEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence            99999997 899999999999999988752      1  3578888887653

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.52  E-value=2.5e-13  Score=98.29  Aligned_cols=93  Identities=19%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCC-hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNAD-EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~-~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ..++|++.++|+.|+..   .+++||++ ...+..+++.+++..++         ...||    .+.++.. ++++++++
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~~KP----~p~~~~~~l~~~~~~~  108 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HAVKP----PGCAFRRAHPEMGLTS  108 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CCCCC----ChHHHHHHHHHcCCCH
Confidence            46778888888888644   67999988 56666666777654221         22344    6666664 89999999


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~  193 (238)
                      +++++|||+. .|+.+|+++|+.+++++++..
T Consensus       109 ~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~  140 (170)
T TIGR01668       109 EQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH  140 (170)
T ss_pred             HHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence            9999999998 799999999999999988764

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.52  E-value=9.9e-14  Score=107.90  Aligned_cols=78  Identities=23%  Similarity=0.311  Sum_probs=61.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccChhH--HHHHhHHh
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      .....++..+..++..+++.+|++++++++|||+.||++|.+.+|...++-+..++ +..|++++.+.++  +.+.|.++
T Consensus       181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~  260 (264)
T COG0561         181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKL  260 (264)
T ss_pred             EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHH
Confidence            56666666778888888999999999999999999999999999986555444333 6778888777666  77777665


Q ss_pred             h
Q 035566          215 W  215 (238)
Q Consensus       215 ~  215 (238)
                      +
T Consensus       261 ~  261 (264)
T COG0561         261 L  261 (264)
T ss_pred             h
Confidence            4

>PLN02887 hydrolase family protein

Probab=99.52  E-value=2.1e-13  Score=115.08  Aligned_cols=76  Identities=14%  Similarity=0.060  Sum_probs=60.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPE  213 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~  213 (238)
                      .....++..|..++..+++.+|++++++++|||+.||++|.+.+|+. +.+.++.+  +..|++|+.+.+|  +...|.+
T Consensus       499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek  577 (580)
T PLN02887        499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNGAEKTKAVADVIGVSNDEDGVADAIYR  577 (580)
T ss_pred             EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence            34445555678889889999999999999999999999999999985 55555543  7789999988766  6666655


Q ss_pred             h
Q 035566          214 L  214 (238)
Q Consensus       214 ~  214 (238)
                      +
T Consensus       578 ~  578 (580)
T PLN02887        578 Y  578 (580)
T ss_pred             h
Confidence            4

>PRK10976 putative hydrolase; Provisional

Probab=99.52  E-value=1.3e-13  Score=107.37  Aligned_cols=78  Identities=10%  Similarity=0.116  Sum_probs=59.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Ccccc--ccccChhH--HHHHhH
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGAD--YALENIHN--IREAFP  212 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad--~v~~~~~e--l~~~l~  212 (238)
                      .....++..+..++..+++.+|++++++++|||+.||++|.+.+|...++-+..+. +..|+  +++.+.+|  +...|.
T Consensus       182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~  261 (266)
T PRK10976        182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR  261 (266)
T ss_pred             EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence            34444555678888888999999999999999999999999999985444444433 56665  78877766  777776


Q ss_pred             Hhh
Q 035566          213 ELW  215 (238)
Q Consensus       213 ~~~  215 (238)
                      +++
T Consensus       262 ~~~  264 (266)
T PRK10976        262 KLY  264 (266)
T ss_pred             HHh
Confidence            654

>PRK11590 hypothetical protein; Provisional

Probab=99.48  E-value=1.2e-12  Score=98.36  Aligned_cols=103  Identities=10%  Similarity=-0.058  Sum_probs=68.4

Q ss_pred             CCCChhHHHHH-hcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecc-c---CC-CCCCCCCchHHHHHHHHhc
Q 035566           88 LKPDPVLRNLL-LSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE-S---LN-PTNKTTGQELQLISMLRMV  158 (238)
Q Consensus        88 ~~~~~~~~~~l-~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-~---~~-~~k~~~~~~~~~~~~~~~~  158 (238)
                      ..++||+.+.| +.++.   +.+|+|+++...+..+++.+|+.. .+.+++.. .   .+ ...+.-.....+..+-+.+
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~  172 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI  172 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence            46799999999 45653   367999999999999999988632 22233222 0   11 1111111233344444555


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +.+...+.+.|||.+|+.|...+|- .++||...
T Consensus       173 ~~~~~~~~aY~Ds~~D~pmL~~a~~-~~~vnp~~  205 (211)
T PRK11590        173 GTPLRLYSGYSDSKQDNPLLYFCQH-RWRVTPRG  205 (211)
T ss_pred             CCCcceEEEecCCcccHHHHHhCCC-CEEECccH
Confidence            6677888999999999999999995 56666554

>PRK10444 UMP phosphatase; Provisional

Probab=99.47  E-value=1.7e-13  Score=104.88  Aligned_cols=62  Identities=19%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             CchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHH
Q 035566          146 GQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNI  207 (238)
Q Consensus       146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el  207 (238)
                      ||++.++.. ++.+++++++++||||+. .|+.+|+++|+.++++.+|..        ..+++++++++.+|
T Consensus       174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            457777775 789999999999999997 899999999999999988752        25689999999887

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.47  E-value=2.8e-13  Score=107.33  Aligned_cols=101  Identities=17%  Similarity=0.203  Sum_probs=83.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc-ccceeeeccc-------CCCCCCCCCchHHHHHH-H
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFES-------LNPTNKTTGQELQLISM-L  155 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~-------~~~~k~~~~~~~~~~~~-~  155 (238)
                      ..++|++.++++.++.+   .+++|+.+.......++++++.+ +|+.+++.+.       ....    +|.+.++.. +
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~----kp~p~~~~~~l  261 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDK----RPDDVVKEEIF  261 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCC----CCcHHHHHHHH
Confidence            46789999999888654   57999999999999999999997 8998887762       2233    347776664 7


Q ss_pred             HhcCC-CCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          156 RMVAH-HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       156 ~~~~~-~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++++. ++++|++|||+.+|+.+|+++|+++++|.+|.
T Consensus       262 ~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        262 WEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             HHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence            88888 67999999999999999999999999998764

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.47  E-value=6.8e-14  Score=105.47  Aligned_cols=96  Identities=14%  Similarity=0.151  Sum_probs=63.8

Q ss_pred             EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      +.+......+...++..++.....    ........++..+...+..+++.+|++++++++|||+.||++|++.+|+..+
T Consensus       112 ~~~~~~~~~~~~~l~~~~~~~~~~----~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va  187 (215)
T TIGR01487       112 MREGKDVDEVREIIKERGLNLVDS----GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA  187 (215)
T ss_pred             ecCCccHHHHHHHHHhCCeEEEec----CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence            345445556666666655443211    1112222333445777777899999999999999999999999999998655


Q ss_pred             EecCCCC-CccccccccChhH
Q 035566          187 LVGTSRR-TKGADYALENIHN  206 (238)
Q Consensus       187 ~v~~~~~-~~~ad~v~~~~~e  206 (238)
                      +-+..++ +..|++++.+.++
T Consensus       188 m~na~~~~k~~A~~v~~~~~~  208 (215)
T TIGR01487       188 VANADDQLKEIADYVTSNPYG  208 (215)
T ss_pred             cCCccHHHHHhCCEEcCCCCC
Confidence            4444333 6678988876443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.47  E-value=2.3e-13  Score=106.29  Aligned_cols=77  Identities=12%  Similarity=0.135  Sum_probs=61.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc--cccChhH--HHHHh
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY--ALENIHN--IREAF  211 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~--v~~~~~e--l~~~l  211 (238)
                      .....++..|..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+  +..|++  ++.+.+|  +...|
T Consensus       180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l  258 (272)
T PRK15126        180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL  258 (272)
T ss_pred             EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence            45566666778999999999999999999999999999999999984 55555543  666775  6766655  77777


Q ss_pred             HHhh
Q 035566          212 PELW  215 (238)
Q Consensus       212 ~~~~  215 (238)
                      .+++
T Consensus       259 ~~~~  262 (272)
T PRK15126        259 THWL  262 (272)
T ss_pred             HHHh
Confidence            7766

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.46  E-value=2.6e-13  Score=93.48  Aligned_cols=85  Identities=20%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecC-ChHHHHHHHHhcC-------cccccceeeecccCCCCCCCCCchHHHHHHHHh
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNA-DEIHVAKVLRKLG-------LEDCFDGIVNFESLNPTNKTTGQELQLISMLRM  157 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~-~~~~~~~~l~~~~-------~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~  157 (238)
                      +++||+.++|+.++.+   .+++||+ ........++..+       +..+|+.+++++..    |   +...+..++++
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~----p---kp~~~~~a~~~  101 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL----P---KSPRLVEIALK  101 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC----c---HHHHHHHHHHH
Confidence            5679999999988755   5699999 7888888889888       78889888776532    2   23334456899


Q ss_pred             cC--CCCCeEEEEeCCccchhHHHh
Q 035566          158 VA--HHFFQRLFFDDSTRNIECGKS  180 (238)
Q Consensus       158 ~~--~~~~~~v~vgD~~~di~~a~~  180 (238)
                      +|  ++|++|+||||+..|+...++
T Consensus       102 lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       102 LNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             hcCCCCcceEEEECCCHhHHHHHHh
Confidence            99  999999999999999776654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.44  E-value=1e-12  Score=100.43  Aligned_cols=70  Identities=20%  Similarity=0.232  Sum_probs=59.3

Q ss_pred             CCCchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHhHH
Q 035566          144 TTGQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       144 ~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l~~  213 (238)
                      .+||.+.+++. ++.++.++++++||||+. .||.+|.++||.+++|.+|-.        ...++++.+++.++...+..
T Consensus       188 ~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~  267 (269)
T COG0647         188 IGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKE  267 (269)
T ss_pred             cCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhc
Confidence            34568888886 799999999999999996 569999999999999988863        35689999999998876654

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.43  E-value=1.9e-13  Score=102.98  Aligned_cols=86  Identities=16%  Similarity=0.210  Sum_probs=67.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH-HHHHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL-ISMLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~  163 (238)
                      .+++|++.++|+.|+..   .+++|+........+.+.+|+.+   .++.+...  .||    .+.+ ..+++.++++++
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--~kP----~~k~~~~~i~~l~~~~~  196 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--GKP----EPKIFLRIIKELQVKPG  196 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--TTT----HHHHHHHHHHHHTCTGG
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--ccc----cchhHHHHHHHHhcCCC
Confidence            36789999999998765   46999999999999999999843   22222211  333    5544 446899999999


Q ss_pred             eEEEEeCCccchhHHHhcC
Q 035566          164 QRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G  182 (238)
                      +++||||+.||+.|++.+|
T Consensus       197 ~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  197 EVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             GEEEEESSGGHHHHHHHSS
T ss_pred             EEEEEccCHHHHHHHHhCc
Confidence            9999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.41  E-value=3.1e-12  Score=99.93  Aligned_cols=72  Identities=11%  Similarity=0.087  Sum_probs=54.0

Q ss_pred             CchHHHHHHHHhcCCCC-CeEEEEeCCccchhHHHhcCCeEEEecCCCC-C----ccc-cccc--cC--hhHHHHHhHHh
Q 035566          146 GQELQLISMLRMVAHHF-FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-T----KGA-DYAL--EN--IHNIREAFPEL  214 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~-~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~----~~a-d~v~--~~--~~el~~~l~~~  214 (238)
                      .+...+..+++.+|+++ +++++|||+.||++|++.+|+.+++-|..++ +    ..+ +.++  .+  -+.+.+.|.++
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~  269 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL  269 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence            45677777899999999 9999999999999999999986665555544 3    333 4666  44  33577778777


Q ss_pred             hhc
Q 035566          215 WDA  217 (238)
Q Consensus       215 ~~~  217 (238)
                      +..
T Consensus       270 ~~~  272 (273)
T PRK00192        270 LSK  272 (273)
T ss_pred             Hhh
Confidence            653

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.40  E-value=2.4e-12  Score=100.46  Aligned_cols=80  Identities=13%  Similarity=0.148  Sum_probs=60.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCC---CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-------CccccccccChh--
Q 035566          138 LNPTNKTTGQELQLISMLRMVAH---HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-------TKGADYALENIH--  205 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~---~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~--  205 (238)
                      .....++..+..++..+++.+|+   +++++++|||+.||++|.+.+|...++-+...+       +..++++++..+  
T Consensus       179 iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~  258 (271)
T PRK03669        179 WHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPE  258 (271)
T ss_pred             EEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcH
Confidence            34455566678888888999999   999999999999999999999986555433311       235788888766  


Q ss_pred             HHHHHhHHhhhc
Q 035566          206 NIREAFPELWDA  217 (238)
Q Consensus       206 el~~~l~~~~~~  217 (238)
                      .+.+.+..++.+
T Consensus       259 g~~~~l~~~~~~  270 (271)
T PRK03669        259 GWREGLDHFFSA  270 (271)
T ss_pred             HHHHHHHHHHhc
Confidence            477777766543

>PRK08238 hypothetical protein; Validated

Probab=99.38  E-value=4.3e-12  Score=105.41  Aligned_cols=97  Identities=16%  Similarity=0.196  Sum_probs=76.9

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      ..++.+|++.+.+++++.+   .+++|+++...++.+++++|+   |+.+++++.....++    ++....+.+.++  .
T Consensus        69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg----~~K~~~l~~~l~--~  139 (479)
T PRK08238         69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKG----AAKAAALVEAFG--E  139 (479)
T ss_pred             hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCC----chHHHHHHHHhC--c
Confidence            4566789999999998765   479999999999999999987   899998887665554    233333445554  3


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++++++||+.+|+.+++.+| +.+.|+.+.
T Consensus       140 ~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        140 RGFDYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             cCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence            56899999999999999999 678887775

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.35  E-value=2.7e-12  Score=79.91  Aligned_cols=62  Identities=21%  Similarity=0.342  Sum_probs=54.5

Q ss_pred             CchHHHHHH-HHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC--------CccccccccChhHH
Q 035566          146 GQELQLISM-LRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNI  207 (238)
Q Consensus       146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el  207 (238)
                      ||.+.++.. ++.++++++++++|||+ ..||.+|+++|+.+++|.+|..        ...||++++++.|+
T Consensus         4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            457777775 89999999999999999 9999999999999999988763        35899999999885

...

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.35  E-value=4.3e-12  Score=97.35  Aligned_cols=96  Identities=18%  Similarity=0.126  Sum_probs=71.6

Q ss_pred             ChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccccccee--eecccCCCCCCCCCchHHHHHH-HHhcCCC-CCe
Q 035566           91 DPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGI--VNFESLNPTNKTTGQELQLISM-LRMVAHH-FFQ  164 (238)
Q Consensus        91 ~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i--~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~-~~~  164 (238)
                      ++++.++++.+..+  .+++||.+.......+..++...+|..+  .+.+.....    ||.+.++.. +++++.. +++
T Consensus       140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~g----KP~~~~~~~~~~~~~~~~~~~  215 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSG----KPYPAIFHKALKECSNIPKNR  215 (242)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecCC----CCCHHHHHHHHHHcCCCCccc
Confidence            68888888876543  3588998887776667777777666654  333332333    457777775 7888864 679


Q ss_pred             EEEEeCC-ccchhHHHhcCCeEEEecC
Q 035566          165 RLFFDDS-TRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       165 ~v~vgD~-~~di~~a~~~G~~~i~v~~  190 (238)
                      ++||||+ .+|+.+|+++|+.+++|.+
T Consensus       216 ~~~vGD~~~~Di~~a~~~G~~~i~v~t  242 (242)
T TIGR01459       216 MLMVGDSFYTDILGANRLGIDTALVLT  242 (242)
T ss_pred             EEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence            9999999 5999999999999999853

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.34  E-value=9e-12  Score=86.38  Aligned_cols=87  Identities=25%  Similarity=0.291  Sum_probs=67.2

Q ss_pred             hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566           92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF  168 (238)
Q Consensus        92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v  168 (238)
                      |.+++.+..++.+   .+|+||+.+..+....+.+|+.    .++     ...||   ....+.++++.+++++++|+||
T Consensus        49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~-----~A~KP---~~~~fr~Al~~m~l~~~~vvmV  116 (175)
T COG2179          49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIY-----RAKKP---FGRAFRRALKEMNLPPEEVVMV  116 (175)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eee-----cccCc---cHHHHHHHHHHcCCChhHEEEE
Confidence            4455555555544   5799999999999999998864    332     23344   4566777899999999999999


Q ss_pred             eCCc-cchhHHHhcCCeEEEecC
Q 035566          169 DDST-RNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       169 gD~~-~di~~a~~~G~~~i~v~~  190 (238)
                      ||.. .|+.++..+|+++|+|-.
T Consensus       117 GDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         117 GDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             cchhhhhhhcccccCcEEEEEEE
Confidence            9995 679999999999999954

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.34  E-value=7e-11  Score=88.76  Aligned_cols=118  Identities=18%  Similarity=0.269  Sum_probs=80.2

Q ss_pred             CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCC--CC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC----
Q 035566           69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP--IR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN----  139 (238)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~----  139 (238)
                      +.+.+++.+.+      ..+++.||+.++++.+.  ..   .+|+|++....++.++++.|+...|+.+++....-    
T Consensus        57 gvt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G  130 (234)
T PF06888_consen   57 GVTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG  130 (234)
T ss_pred             CCCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc
Confidence            35566666555      34678899999999883  22   57999999999999999999999988877643210    


Q ss_pred             ----------CCCCCC---CchHHHHHHHHh---cCCCCCeEEEEeCCccchhHHHhcCCeEEE-ecCCC
Q 035566          140 ----------PTNKTT---GQELQLISMLRM---VAHHFFQRLFFDDSTRNIECGKSIGLHTVL-VGTSR  192 (238)
Q Consensus       140 ----------~~k~~~---~~~~~~~~~~~~---~~~~~~~~v~vgD~~~di~~a~~~G~~~i~-v~~~~  192 (238)
                                ..+..+   =+...+.++.+.   -|.+-++++||||+.||+-++.+.+-.-+. ...+.
T Consensus       131 ~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~  200 (234)
T PF06888_consen  131 RLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY  200 (234)
T ss_pred             eEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence                      011111   112223334333   367779999999999999999987765444 44443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.32  E-value=1.8e-12  Score=88.72  Aligned_cols=115  Identities=18%  Similarity=0.264  Sum_probs=84.4

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN  174 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d  174 (238)
                      .++|..+..+.+|+|+..+..++...+.+|+..+|-.   ..         ++...+.++++++++.++++.++||-.+|
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG---~~---------dK~~a~~~L~~~~~l~~e~~ayiGDD~~D  111 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG---IS---------DKLAAFEELLKKLNLDPEEVAYVGDDLVD  111 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec---hH---------hHHHHHHHHHHHhCCCHHHhhhhcCcccc
Confidence            4567777889999999999999999999998744322   12         13566667899999999999999999999


Q ss_pred             hhHHHhcCCeEEEecCCCC-CccccccccChh---HHHHHhHHhhhccccc
Q 035566          175 IECGKSIGLHTVLVGTSRR-TKGADYALENIH---NIREAFPELWDADEIS  221 (238)
Q Consensus       175 i~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~---el~~~l~~~~~~~~~~  221 (238)
                      +.....+|.+++..+..+. +..+++|+..-.   .++++..-++++.+..
T Consensus       112 lpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~  162 (170)
T COG1778         112 LPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL  162 (170)
T ss_pred             HHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence            9999999997655444433 667888876422   1444444445555443

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.32  E-value=1.7e-12  Score=91.88  Aligned_cols=92  Identities=13%  Similarity=0.075  Sum_probs=79.3

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      ..++||+.++|+.++..  .+|+|++...+++.+++++++.. +|+.++++++....||    .  +.+.++.+|.+|++
T Consensus        44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP----~--~~k~l~~l~~~p~~  117 (148)
T smart00577       44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKG----K--YVKDLSLLGRDLSN  117 (148)
T ss_pred             EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCC----e--EeecHHHcCCChhc
Confidence            56789999999999743  67999999999999999999865 5688999888887776    3  55568999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeE
Q 035566          165 RLFFDDSTRNIECGKSIGLHT  185 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~  185 (238)
                      |++|||+.+|+.++..+|+..
T Consensus       118 ~i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577      118 VIIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             EEEEECCHHHhhcCccCEEEe
Confidence            999999999999999998754

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.30  E-value=9.6e-11  Score=82.21  Aligned_cols=190  Identities=13%  Similarity=0.112  Sum_probs=111.1

Q ss_pred             CCceeEEEEecCCceeeCc---cchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccch--hhhhh-------ccC
Q 035566            1 MTKYECLLFDVDDTLYSHS---YGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM--AGLKA-------VGY   68 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~   68 (238)
                      |.+.|++++|+.||..+-+   +.++.-..+.+.+|..+..+-+..  ..+........|...  +.+..       .+.
T Consensus         1 m~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v--~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~   78 (229)
T COG4229           1 MVMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEV--KKIVDEVLSEFGIANSEEALVALLLEWIAEDS   78 (229)
T ss_pred             CcchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChh--hHHHHHHHHHhCccchHHHHHHHHHHHHhccc
Confidence            6677999999999998853   234445555566655555443321  111122222333222  11110       011


Q ss_pred             C-CChHh----HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---Ccccccceeeeccc
Q 035566           69 D-FDNDD----YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFES  137 (238)
Q Consensus        69 ~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~  137 (238)
                      . .....    .+..-.+.-. -..+.||++.+.+++++..   .+|.|++.-..+.-...+.   .+..+|+.++... 
T Consensus        79 K~t~lK~lQG~iWa~Gy~sge-lkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-  156 (229)
T COG4229          79 KDTPLKALQGMIWAHGYESGE-LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-  156 (229)
T ss_pred             ccchHHHHHhHHHHhccccCc-cccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-
Confidence            0 11111    1111111110 1246799999999988755   5788888766665555543   3445666655432 


Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcccc
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGAD  198 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad  198 (238)
                        ..++  .....+.++++..|++|.+++|..|.++.+.+|+.+|++++++.+....+.+|
T Consensus       157 --iG~K--rE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d  213 (229)
T COG4229         157 --IGKK--RESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD  213 (229)
T ss_pred             --cccc--ccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCC
Confidence              1111  12333455789999999999999999999999999999999987766544444

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.29  E-value=2.7e-10  Score=85.22  Aligned_cols=103  Identities=8%  Similarity=-0.071  Sum_probs=66.4

Q ss_pred             CCCChhHHHHHh-cCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecc----cCCC-CCCCCCchHHHHHHHHhc
Q 035566           88 LKPDPVLRNLLL-SLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE----SLNP-TNKTTGQELQLISMLRMV  158 (238)
Q Consensus        88 ~~~~~~~~~~l~-~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~----~~~~-~k~~~~~~~~~~~~~~~~  158 (238)
                      ..++|++.+.|+ +++.   ..+|+|+++...++.+.+..++..- +.+++..    +.+. ..+.-.....+..+.+.+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~  171 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI  171 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence            357899999995 5553   3679999999999999988655332 2222221    1111 111111233344444455


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +.+.+.+.+.|||.+|+.|...+|- .+.|+...
T Consensus       172 ~~~~~~~~aYsDS~~D~pmL~~a~~-~~~Vnp~~  204 (210)
T TIGR01545       172 GSPLKLYSGYSDSKQDNPLLAFCEH-RWRVSKRG  204 (210)
T ss_pred             CCChhheEEecCCcccHHHHHhCCC-cEEECcch
Confidence            6566788999999999999999995 56665543

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.28  E-value=2.5e-10  Score=87.71  Aligned_cols=110  Identities=13%  Similarity=0.120  Sum_probs=77.2

Q ss_pred             CCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccccee------eecccC
Q 035566           68 YDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGI------VNFESL  138 (238)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i------~~~~~~  138 (238)
                      ..++.+...+.+.+    ..+++.||+.++++.|+..   .+|+|++....++.+++++|+...+..+      +..+..
T Consensus       104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGv  179 (277)
T TIGR01544       104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGV  179 (277)
T ss_pred             CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCe
Confidence            44445555544432    3478899999999988654   6799999999999999999986555444      222222


Q ss_pred             CCCCCCC-----CchHHHHH-HHHhcC--CCCCeEEEEeCCccchhHHHhc
Q 035566          139 NPTNKTT-----GQELQLIS-MLRMVA--HHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       139 ~~~k~~~-----~~~~~~~~-~~~~~~--~~~~~~v~vgD~~~di~~a~~~  181 (238)
                      -..++.+     .+...+++ .++.++  .++++|++||||.+|+.||..+
T Consensus       180 ltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       180 LKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             EeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence            1122211     33446665 578888  8999999999999999998776

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01686 FkbH FkbH-like domain

Probab=99.26  E-value=1.5e-11  Score=97.96  Aligned_cols=86  Identities=17%  Similarity=0.084  Sum_probs=71.4

Q ss_pred             CChhHHHHHhcCCCC---eEEEecCChHHHHHHHHh----cCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           90 PDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRK----LGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~----~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      +++++.++|+.|+.+   .+|+|+++...+..++++    +++.++|+.+...     .+|   ++..+..+++++|+++
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~p---k~~~i~~~~~~l~i~~  103 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGP---KSESLRKIAKKLNLGT  103 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCc---hHHHHHHHHHHhCCCc
Confidence            468888999888766   469999999999999999    8888899887554     233   3555666789999999


Q ss_pred             CeEEEEeCCccchhHHHhcCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~  183 (238)
                      ++++||||++.|+.+++.++-
T Consensus       104 ~~~vfidD~~~d~~~~~~~lp  124 (320)
T TIGR01686       104 DSFLFIDDNPAERANVKITLP  124 (320)
T ss_pred             CcEEEECCCHHHHHHHHHHCC
Confidence            999999999999999999764

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.26  E-value=1e-11  Score=96.22  Aligned_cols=69  Identities=17%  Similarity=0.215  Sum_probs=54.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccChhH
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHN  206 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e  206 (238)
                      .....++..|..++..+++.+|++++++++|||+.||++|++.+|+..++.+.... +..|++++.+.++
T Consensus       180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~  249 (256)
T TIGR00099       180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE  249 (256)
T ss_pred             EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence            44555556678888889999999999999999999999999999986555443332 6668888877654

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.24  E-value=2.3e-10  Score=90.66  Aligned_cols=103  Identities=19%  Similarity=0.183  Sum_probs=77.4

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc-C-------cccccceeeecccCC-----------------
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL-G-------LEDCFDGIVNFESLN-----------------  139 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~-~-------~~~~f~~i~~~~~~~-----------------  139 (238)
                      +.+.|++.++|+.++.+   .+|+||++...++.+++.+ |       +.++||.+++.....                 
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g  262 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG  262 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence            45589999999888654   6899999999999999996 7       889999988765411                 


Q ss_pred             CCCCCC----Cch-----HHHHHHHHhcCCCCCeEEEEeCCc-cchhHHH-hcCCeEEEecC
Q 035566          140 PTNKTT----GQE-----LQLISMLRMVAHHFFQRLFFDDST-RNIECGK-SIGLHTVLVGT  190 (238)
Q Consensus       140 ~~k~~~----~~~-----~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~-~~G~~~i~v~~  190 (238)
                      ..++..    .+.     .....+.+.+|++++++++|||++ .|+..++ .+||.++++..
T Consensus       263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence            111110    001     223445688899999999999996 5688887 89999999855

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.24  E-value=5e-10  Score=80.32  Aligned_cols=115  Identities=17%  Similarity=0.265  Sum_probs=77.5

Q ss_pred             hhHHHHHhcCC---CCeEEEecCC---------------hHHHHHHHHhcCcccccceeeecccCCCC-CCCCCchHHHH
Q 035566           92 PVLRNLLLSLP---IRKVIFSNAD---------------EIHVAKVLRKLGLEDCFDGIVNFESLNPT-NKTTGQELQLI  152 (238)
Q Consensus        92 ~~~~~~l~~l~---~~~~i~t~~~---------------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~-k~~~~~~~~~~  152 (238)
                      |++.+.|..++   .+.+++||.+               ...+...++..|.  .|+.++.|.+.... =...||.+.++
T Consensus        34 ~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~  111 (181)
T COG0241          34 PGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGML  111 (181)
T ss_pred             ccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHH
Confidence            55555555553   3456777731               1223344555555  48888887754331 12223466655


Q ss_pred             H-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHH
Q 035566          153 S-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIR  208 (238)
Q Consensus       153 ~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~  208 (238)
                      . +++++++++.+.++|||+..|+++|.++|+..+.+.++..     ....+.+.+++.++.
T Consensus       112 ~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (181)
T COG0241         112 LSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA  173 (181)
T ss_pred             HHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence            5 6999999999999999999999999999999888866653     224567777877776

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.23  E-value=1.4e-10  Score=82.30  Aligned_cols=120  Identities=14%  Similarity=0.235  Sum_probs=76.8

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc--ccce---------eeecccCCCCCCCCCchHHH
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED--CFDG---------IVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~--~f~~---------i~~~~~~~~~k~~~~~~~~~  151 (238)
                      ...+.-||++++.+.|+.+   .+++|++....+.++...+|+..  .+-.         +.+.+..+....++.+...+
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i  164 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI  164 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence            3456779999999888755   68999999999999999999874  2211         22222223222233344444


Q ss_pred             HHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC----CCccccccccChhHHH
Q 035566          152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR----RTKGADYALENIHNIR  208 (238)
Q Consensus       152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~----~~~~ad~v~~~~~el~  208 (238)
                      ..+.+  +.+-+.++||||+.+|++|..-+ .-.++.+.-.    -+..+++.+.++..|.
T Consensus       165 ~~lrk--~~~~~~~~mvGDGatDlea~~pa-~afi~~~g~~~r~~vk~nak~~~~~f~~L~  222 (227)
T KOG1615|consen  165 ALLRK--NYNYKTIVMVGDGATDLEAMPPA-DAFIGFGGNVIREGVKANAKWYVTDFYVLG  222 (227)
T ss_pred             HHHHh--CCChheeEEecCCccccccCCch-hhhhccCCceEcHhhHhccHHHHHHHHHHc
Confidence            44444  77779999999999998877663 2233222211    2556666666666553

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.18  E-value=4.7e-11  Score=85.19  Aligned_cols=98  Identities=23%  Similarity=0.361  Sum_probs=69.1

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEec-CChHHHHHHHHhcCcc----------cccceeeecccCCCCCCCCCchHHHH
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSN-ADEIHVAKVLRKLGLE----------DCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~-~~~~~~~~~l~~~~~~----------~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      .+..+|++.+.|+.|+.+   .+++|. ..+..+...|+.+++.          ++|+..-....        ++...+.
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--------sK~~Hf~  114 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--------SKTTHFR  114 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS---------HHHHHH
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC--------chHHHHH
Confidence            467889999999888755   567884 4567899999999999          77776433321        3577888


Q ss_pred             HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      .+.++.|++.++.+||+|..+++......|+.++++.+|-
T Consensus       115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl  154 (169)
T PF12689_consen  115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL  154 (169)
T ss_dssp             HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred             HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence            8889999999999999999999999999999999998863

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.18  E-value=8.8e-11  Score=93.61  Aligned_cols=67  Identities=10%  Similarity=0.126  Sum_probs=53.2

Q ss_pred             CCchHHHHHH-HHhc--------CC-----CCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-------Ccccccccc
Q 035566          145 TGQELQLISM-LRMV--------AH-----HFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-------TKGADYALE  202 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~--------~~-----~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~  202 (238)
                      +||.+.+++. ++.+        +.     ++++++||||++ .||.+|+++||.+++|.+|..       ...++++++
T Consensus       232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~  311 (321)
T TIGR01456       232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN  311 (321)
T ss_pred             CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence            5678888886 4455        33     457999999998 899999999999999988631       235789999


Q ss_pred             ChhHHHHHh
Q 035566          203 NIHNIREAF  211 (238)
Q Consensus       203 ~~~el~~~l  211 (238)
                      ++.|+...|
T Consensus       312 ~l~e~~~~i  320 (321)
T TIGR01456       312 DVFDAVTKI  320 (321)
T ss_pred             CHHHHHHHh
Confidence            999987654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.16  E-value=2.2e-10  Score=86.73  Aligned_cols=43  Identities=7%  Similarity=-0.023  Sum_probs=36.9

Q ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          144 TTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      +..+..++..+++.+|++++++++|||+.||++|.+.+|...+
T Consensus       177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va  219 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV  219 (221)
T ss_pred             CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence            3345667777899999999999999999999999999997544

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.14  E-value=4.1e-10  Score=85.68  Aligned_cols=121  Identities=15%  Similarity=0.100  Sum_probs=76.6

Q ss_pred             ChhHHHHHhcCCCCe--EEEecCChHHH-HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEE
Q 035566           91 DPVLRNLLLSLPIRK--VIFSNADEIHV-AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRL  166 (238)
Q Consensus        91 ~~~~~~~l~~l~~~~--~i~t~~~~~~~-~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v  166 (238)
                      |+.+...++.|+..+  ++.||.+...- .......|-..+...+..+.. ....-.+||.+.+... .++.+++|++++
T Consensus       167 y~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~-R~P~v~GKP~~~m~~~l~~~~~i~psRt~  245 (306)
T KOG2882|consen  167 YPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATG-RQPIVLGKPSTFMFEYLLEKFNIDPSRTC  245 (306)
T ss_pred             HHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhc-CCCeecCCCCHHHHHHHHHHcCCCcceEE
Confidence            455666677777653  46666543211 111112222223333322221 1112234567777775 899999999999


Q ss_pred             EEeCCccc-hhHHHhcCCeEEEecCCCC------------CccccccccChhHHHHHhH
Q 035566          167 FFDDSTRN-IECGKSIGLHTVLVGTSRR------------TKGADYALENIHNIREAFP  212 (238)
Q Consensus       167 ~vgD~~~d-i~~a~~~G~~~i~v~~~~~------------~~~ad~v~~~~~el~~~l~  212 (238)
                      ||||+.+. |..++.+|++++++.+|..            +..|||.++++.++.+.++
T Consensus       246 mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~~  304 (306)
T KOG2882|consen  246 MVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLLN  304 (306)
T ss_pred             EEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhcc
Confidence            99999764 9999999999999977752            3458888888888776543

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.11  E-value=1.3e-10  Score=88.73  Aligned_cols=46  Identities=22%  Similarity=0.268  Sum_probs=40.0

Q ss_pred             CchHHHHHH-HHhcCCCCCeE-EEEeCCc-cchhHHHhcCCeEEEecCC
Q 035566          146 GQELQLISM-LRMVAHHFFQR-LFFDDST-RNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       146 ~~~~~~~~~-~~~~~~~~~~~-v~vgD~~-~di~~a~~~G~~~i~v~~~  191 (238)
                      ||++.+++. +++++++++++ +||||+. .|+.+|+++|+.+++|.+|
T Consensus       188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            457777775 78999988887 9999998 7999999999999999764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.09  E-value=1.4e-10  Score=89.31  Aligned_cols=65  Identities=23%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN  206 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e  206 (238)
                      ..+...+..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+  +..|++++++..+
T Consensus       181 ~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~  247 (254)
T PF08282_consen  181 TPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND  247 (254)
T ss_dssp             EETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred             eeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence            33444568888888999999999999999999999999999975 55555543  6778888888776

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.09  E-value=4.8e-10  Score=80.54  Aligned_cols=68  Identities=12%  Similarity=0.197  Sum_probs=56.4

Q ss_pred             CchHHHHHH-HHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCC--------CCccccccccChhHHHHHhHH
Q 035566          146 GQELQLISM-LRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSR--------RTKGADYALENIHNIREAFPE  213 (238)
Q Consensus       146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~--------~~~~ad~v~~~~~el~~~l~~  213 (238)
                      ||.+.+|+- ++.+|++|+++|||||..+| +-.|+++||..+.|.+|.        ....||...+++.|..++|-|
T Consensus       181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~q  258 (262)
T KOG3040|consen  181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLIIQ  258 (262)
T ss_pred             CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHHh
Confidence            457777774 89999999999999999888 999999999999997764        145678888888888777644

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.08  E-value=7.1e-10  Score=92.78  Aligned_cols=88  Identities=17%  Similarity=0.167  Sum_probs=66.7

Q ss_pred             CChhHHHHHhcCCCC---eEEEecCCh------------HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566           90 PDPVLRNLLLSLPIR---KVIFSNADE------------IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM  154 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~---~~i~t~~~~------------~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~  154 (238)
                      ++||+.+.|+.|+..   .+|+||...            ..+..+++.+|+.  |+.+++.......||    .++++..
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP----~pGm~~~  271 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKP----LTGMWDH  271 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCC----CHHHHHH
Confidence            457888888888654   679999765            3577888998885  887776665556665    6666664


Q ss_pred             -HHhcC----CCCCeEEEEeCCccchhHHHhcCC
Q 035566          155 -LRMVA----HHFFQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       155 -~~~~~----~~~~~~v~vgD~~~di~~a~~~G~  183 (238)
                       ++.++    +++++++||||+..|+.+++.+|-
T Consensus       272 a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       272 LKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             HHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence             67774    899999999999999888777664

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.06  E-value=5e-09  Score=81.15  Aligned_cols=72  Identities=14%  Similarity=0.122  Sum_probs=52.6

Q ss_pred             CCCCchHHHHHHHHhcCCC--CCeEEEEeCCccchhHHHhcCCeEEEecCCC---C-Ccc--c-cccccChhH--HHHHh
Q 035566          143 KTTGQELQLISMLRMVAHH--FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---R-TKG--A-DYALENIHN--IREAF  211 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~--~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~-~~~--a-d~v~~~~~e--l~~~l  211 (238)
                      +...+..++..+++.+|++  ++++++|||+.||+.|.+.+|...++-+..+   + +..  | ++++.+..+  +.+.|
T Consensus       173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l  252 (256)
T TIGR01486       173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL  252 (256)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence            3345577788889999999  9999999999999999999998655555542   2 443  3 478866444  66655


Q ss_pred             HHh
Q 035566          212 PEL  214 (238)
Q Consensus       212 ~~~  214 (238)
                      .++
T Consensus       253 ~~~  255 (256)
T TIGR01486       253 EHL  255 (256)
T ss_pred             HHh
Confidence            543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=99.03  E-value=2.8e-10  Score=84.13  Aligned_cols=172  Identities=16%  Similarity=0.206  Sum_probs=88.7

Q ss_pred             eE-EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH-HHHHH-HHHHhhccchhhhhhccCCCChHhHHHhhhC
Q 035566            5 EC-LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV-SEFNR-VLYKNYGTSMAGLKAVGYDFDNDDYHSFVHG   81 (238)
Q Consensus         5 k~-vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (238)
                      ++ |++||||||.|....        +.+++.+.++.+.... ..+.. .....+|....        ...+.+...+..
T Consensus         2 ~i~I~iDiDgVLad~~~~--------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~~~--------e~~~~~~~~~~~   65 (191)
T PF06941_consen    2 KIRIAIDIDGVLADFNSA--------FIEWFNEEFGKNPELTPEDITGYWDWEKWGITEP--------EFYEKLWRFYEE   65 (191)
T ss_dssp             -EEEEEESBTTTB-HHHH--------HHHHHHHHTTTS----GGGGTSSSHHHHHHHHST--------THHHHHHHHHTS
T ss_pred             CcEEEEECCCCCcccHHH--------HHHHHHHHcCCCCCCCHHHhhhhhHHHHhCCCCH--------HHHHHHHHHHhC
Confidence            35 899999999994222        2234455566552110 00000 01112221111        112334444444


Q ss_pred             CCCCCCCCCChhHHHHHhcCCCC---eEEEecCChH-------HHHHHH-HhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           82 RLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEI-------HVAKVL-RKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        82 ~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~-------~~~~~l-~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      .-....++|.||+.+.|+.|...   .+++|..+..       ....-+ +++|.. .++.++.+..    |     .  
T Consensus        66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i-~~~~~~~~~~----K-----~--  133 (191)
T PF06941_consen   66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI-PYDNLIFTGD----K-----T--  133 (191)
T ss_dssp             TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH-HHCCEEEESS----G-----G--
T ss_pred             hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC-chheEEEecC----C-----C--
Confidence            34446789999999999999765   4566665433       222223 333322 2233443321    1     1  


Q ss_pred             HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcc-ccccccChhHHHHHhHHh
Q 035566          151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKG-ADYALENIHNIREAFPEL  214 (238)
Q Consensus       151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~-ad~v~~~~~el~~~l~~~  214 (238)
                            .++.+    ++|+|++.++..+...|++++++.++.+... .-..+.++.|+.+.+-..
T Consensus       134 ------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~~~  188 (191)
T PF06941_consen  134 ------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLILSS  188 (191)
T ss_dssp             ------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHHHT
T ss_pred             ------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHHhc
Confidence                  23333    8999999999999999999999988775333 467889999998877543

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.02  E-value=1.3e-08  Score=73.96  Aligned_cols=143  Identities=11%  Similarity=0.123  Sum_probs=88.7

Q ss_pred             CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccC----CC
Q 035566           69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----NP  140 (238)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~~  140 (238)
                      ....++..+.+      ..++..||+.++++.++..    +.|+|++....++.+++++|+.++|..|++....    +.
T Consensus        70 gv~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~  143 (256)
T KOG3120|consen   70 GVRIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGR  143 (256)
T ss_pred             CCCHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCc
Confidence            34455555544      3367889999999988765    4599999999999999999999999887764321    10


Q ss_pred             CC--CCC------------CchHHHHHH-H--HhcCCCCCeEEEEeCCccchhHHHhc-CCeEEEecCCCC---------
Q 035566          141 TN--KTT------------GQELQLISM-L--RMVAHHFFQRLFFDDSTRNIECGKSI-GLHTVLVGTSRR---------  193 (238)
Q Consensus       141 ~k--~~~------------~~~~~~~~~-~--~~~~~~~~~~v~vgD~~~di~~a~~~-G~~~i~v~~~~~---------  193 (238)
                      ..  |-.            =+..-+-++ +  .+-|+.-++.+|+||+-||+...... +...++...+.+         
T Consensus       144 L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p  223 (256)
T KOG3120|consen  144 LLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANP  223 (256)
T ss_pred             EEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCc
Confidence            00  100            011112222 2  34467778999999999996655544 445555555553         


Q ss_pred             -Ccccc-ccccChhHHHHHhHHhhhc
Q 035566          194 -TKGAD-YALENIHNIREAFPELWDA  217 (238)
Q Consensus       194 -~~~ad-~v~~~~~el~~~l~~~~~~  217 (238)
                       .-.|. ....+=.|+..++.++.+.
T Consensus       224 ~~~kasV~~W~sg~d~~~~L~~lik~  249 (256)
T KOG3120|consen  224 MLLKASVLEWSSGEDLERILQQLIKT  249 (256)
T ss_pred             ceeeeeEEecccHHHHHHHHHHHHHH
Confidence             11122 3345566666666665443

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=98.99  E-value=3.1e-09  Score=81.30  Aligned_cols=72  Identities=22%  Similarity=0.151  Sum_probs=51.4

Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccc----ccccChh--HHHHHhH
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGAD----YALENIH--NIREAFP  212 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad----~v~~~~~--el~~~l~  212 (238)
                      ..++..+...+..+++++|++++++++|||+.||+.|++.+|.. +.+.+..+  +..++    +++.+..  .+.+.|.
T Consensus       154 ~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~  232 (236)
T TIGR02471       154 LPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN  232 (236)
T ss_pred             eeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence            33333456667667899999999999999999999999999975 55655543  55566    6666533  2555554


Q ss_pred             H
Q 035566          213 E  213 (238)
Q Consensus       213 ~  213 (238)
                      .
T Consensus       233 ~  233 (236)
T TIGR02471       233 H  233 (236)
T ss_pred             h
Confidence            3

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.96  E-value=5.9e-09  Score=80.39  Aligned_cols=53  Identities=23%  Similarity=0.217  Sum_probs=42.9

Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                      ..+...+..++..+++.+|++++++++|||+.||+.|++.++..++++.++.+
T Consensus       162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~  214 (249)
T TIGR01485       162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE  214 (249)
T ss_pred             EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence            33444567777777999999999999999999999999997666788877653

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.96  E-value=8.8e-09  Score=79.99  Aligned_cols=79  Identities=14%  Similarity=0.154  Sum_probs=63.1

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc---CCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI---GLHTVLVGTSRRTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~---G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      ....++..|...+..+++.+|++.+++++|||+.||+.|.+.+   +-.+|.|+++  ...|++.+++..++..+|..+.
T Consensus       167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~  244 (266)
T PRK10187        167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMIT  244 (266)
T ss_pred             EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHH
Confidence            3344455678888888999999999999999999999999988   2346677654  3678999999999999988877


Q ss_pred             hccc
Q 035566          216 DADE  219 (238)
Q Consensus       216 ~~~~  219 (238)
                      ....
T Consensus       245 ~~~~  248 (266)
T PRK10187        245 TAQQ  248 (266)
T ss_pred             Hhhh
Confidence            5544

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.95  E-value=8.5e-09  Score=79.25  Aligned_cols=82  Identities=16%  Similarity=0.138  Sum_probs=55.1

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChH---HHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQLISMLRMVA  159 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~  159 (238)
                      ..+++||+.++|+.++.+   .+++||+...   .+...++.+|+...+ +.++..+. ..  +   +......+.+.++
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-~~--~---K~~rr~~I~~~y~  189 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-KS--S---KESRRQKVQKDYE  189 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-CC--C---cHHHHHHHHhcCC
Confidence            357889999999987544   6799997643   344777888987644 44554432 11  1   2444444556666


Q ss_pred             CCCCeEEEEeCCccchhHH
Q 035566          160 HHFFQRLFFDDSTRNIECG  178 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a  178 (238)
                      +    +++|||+.+|+..+
T Consensus       190 I----vl~vGD~~~Df~~~  204 (266)
T TIGR01533       190 I----VLLFGDNLLDFDDF  204 (266)
T ss_pred             E----EEEECCCHHHhhhh
Confidence            6    89999999998654

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.95  E-value=1.3e-09  Score=80.68  Aligned_cols=85  Identities=18%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             hhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCC--------CCC--CCchHHHHHH---H
Q 035566           92 PVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPT--------NKT--TGQELQLISM---L  155 (238)
Q Consensus        92 ~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~--------k~~--~~~~~~~~~~---~  155 (238)
                      |++.++++.++   .+.+|+|+++...+..+++.+|+....  +++.......        -+.  +.+...+..+   .
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~  169 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRD  169 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHh
Confidence            56668887764   447899999999999999999887421  1111110000        000  0023334334   2


Q ss_pred             HhcCCCCCeEEEEeCCccchhHHH
Q 035566          156 RMVAHHFFQRLFFDDSTRNIECGK  179 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~~~di~~a~  179 (238)
                      .. +.+...+++||||.+|+.|++
T Consensus       170 ~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  170 EE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HH-THTCCEEEEEESSGGGHHHHH
T ss_pred             hc-CCCCCeEEEEECCHHHHHHhC
Confidence            33 788899999999999999985

>PTZ00445 p36-lilke protein; Provisional

Probab=98.88  E-value=8.5e-09  Score=75.14  Aligned_cols=46  Identities=15%  Similarity=0.026  Sum_probs=40.0

Q ss_pred             chHHH--H---HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          147 QELQL--I---SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       147 ~~~~~--~---~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      |.+++  |   +++++.|++|++++||+|+..++++|+++|++++.+..+.
T Consensus       158 Pdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e  208 (219)
T PTZ00445        158 PMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE  208 (219)
T ss_pred             CCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence            35555  4   4689999999999999999999999999999999997654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.85  E-value=7.6e-08  Score=82.11  Aligned_cols=44  Identities=9%  Similarity=0.085  Sum_probs=37.5

Q ss_pred             CCCchHHHHHHHHhcCCCCCeEEEE--eCCccchhHHHhcCCeEEE
Q 035566          144 TTGQELQLISMLRMVAHHFFQRLFF--DDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~v~v--gD~~~di~~a~~~G~~~i~  187 (238)
                      ...+..++..+++.++++.++++.|  ||+.||+.|.+.+|...++
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM  656 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV  656 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence            3345778888899999998999999  9999999999999986554

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.77  E-value=2.2e-07  Score=65.76  Aligned_cols=137  Identities=10%  Similarity=0.115  Sum_probs=86.2

Q ss_pred             CChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-------eeec----
Q 035566           70 FDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-------IVNF----  135 (238)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-------i~~~----  135 (238)
                      .+.++..+.+.     ..+...|+.+++.++++.+   .+++|++-...+..+++.++=.+..+.       ....    
T Consensus        59 ~s~~Eile~ll-----k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~  133 (220)
T COG4359          59 SSLEEILEFLL-----KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ  133 (220)
T ss_pred             CCHHHHHHHHH-----hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc
Confidence            33455555443     3356678899988888755   578999999999999998762221111       1111    


Q ss_pred             --------ccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE---EecCCCCCccccccccCh
Q 035566          136 --------ESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV---LVGTSRRTKGADYALENI  204 (238)
Q Consensus       136 --------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i---~v~~~~~~~~ad~v~~~~  204 (238)
                              +..+..|     ...    ++.+.-+++.+++.|||..|+.+|+....-.+   +++.=.+....-.-..++
T Consensus       134 h~i~~~~ds~fG~dK-----~~v----I~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F  204 (220)
T COG4359         134 HSIKYTDDSQFGHDK-----SSV----IHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETF  204 (220)
T ss_pred             eeeecCCccccCCCc-----chh----HHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccH
Confidence                    1122222     222    34555567789999999999999999875322   111111234445567889


Q ss_pred             hHHHHHhHHhhhcccc
Q 035566          205 HNIREAFPELWDADEI  220 (238)
Q Consensus       205 ~el~~~l~~~~~~~~~  220 (238)
                      .|+..-+++++..+++
T Consensus       205 ~eIlk~iekvl~~~~~  220 (220)
T COG4359         205 YEILKEIEKVLEVQEW  220 (220)
T ss_pred             HHHHHHHHHHHhhhcC
Confidence            9999889998887654

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.75  E-value=2.4e-08  Score=75.63  Aligned_cols=43  Identities=9%  Similarity=0.101  Sum_probs=34.0

Q ss_pred             CCCchHHHHHHHHhcCC--CCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          144 TTGQELQLISMLRMVAH--HFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~--~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      ...+...+..+++.+++  +++++++|||+.||+.|.+.+|+..+
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            33456666666777765  67799999999999999999998543

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.73  E-value=1e-07  Score=73.32  Aligned_cols=52  Identities=29%  Similarity=0.371  Sum_probs=43.3

Q ss_pred             hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC
Q 035566           92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK  143 (238)
Q Consensus        92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~  143 (238)
                      |++.++|++|+.+   .+|+|++.+..+...++.+|+..+|+.++++++....+|
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp  203 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYS  203 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCC
Confidence            6677777777655   479999999999999999999999999998887766664

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.72  E-value=3.6e-08  Score=73.67  Aligned_cols=49  Identities=20%  Similarity=0.152  Sum_probs=39.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      ....+++..+...+..++++++++++++++|||+.||+.|++.+|+..+
T Consensus       155 ~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       155 LEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            3333344556677777799999999999999999999999999998654

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.71  E-value=3.8e-08  Score=83.95  Aligned_cols=109  Identities=13%  Similarity=0.307  Sum_probs=81.8

Q ss_pred             CCCChhHHHHHhcCCC----CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPI----RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~----~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~  163 (238)
                      .+++||+.+.++.|+.    +.+++|+.+...+..+++++|++++|..+.         |  ..+   ...+++++..++
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------p--~~K---~~~i~~l~~~~~  426 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------P--EDK---LEIVKELREKYG  426 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------c--HHH---HHHHHHHHhcCC
Confidence            3678999999988864    456999999999999999999987764332         1  012   224455666668


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEec-CCCC--Cccccccc--cChhHHHHHh
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYAL--ENIHNIREAF  211 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~--~~~~el~~~l  211 (238)
                      +++||||+.||+.+++.+|+ .+.++ .+..  ...+|.++  +++.+|.+++
T Consensus       427 ~v~~vGDg~nD~~al~~A~v-gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i  478 (536)
T TIGR01512       427 PVAMVGDGINDAPALAAADV-GIAMGASGSDVAIETADVVLLNDDLSRLPQAI  478 (536)
T ss_pred             EEEEEeCCHHHHHHHHhCCE-EEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence            99999999999999999997 44444 2222  56789998  8899987765

.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.71  E-value=6.8e-07  Score=69.00  Aligned_cols=40  Identities=15%  Similarity=0.021  Sum_probs=28.2

Q ss_pred             hHHHHHHHHhcCC--CCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566          148 ELQLISMLRMVAH--HFFQRLFFDDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       148 ~~~~~~~~~~~~~--~~~~~v~vgD~~~di~~a~~~G~~~i~  187 (238)
                      ..++..+.+.+.-  .+-.++.+|||+||+.|.+.+.+.++.
T Consensus       210 g~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi  251 (302)
T PRK12702        210 EQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL  251 (302)
T ss_pred             HHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence            4444444444332  345899999999999999999986554

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.70  E-value=4.5e-08  Score=83.94  Aligned_cols=109  Identities=12%  Similarity=0.214  Sum_probs=79.4

Q ss_pred             CCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~  163 (238)
                      .+++||+.+.++.|+.+    .+++|+.+...+..+++++|+.++|..+.         |  ..+.   ..+++++..++
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------p--~~K~---~~v~~l~~~~~  448 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------P--EDKL---AIVKELQEEGG  448 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------H--HHHH---HHHHHHHHcCC
Confidence            45789999999988544    56999999999999999999987765431         1  0122   23444444667


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      +++||||+.||+.+++.+|+. +.++++.+  +..||+++.  ++..+.+++
T Consensus       449 ~v~~vGDg~nD~~al~~A~vg-ia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i  499 (556)
T TIGR01525       449 VVAMVGDGINDAPALAAADVG-IAMGAGSDVAIEAADIVLLNDDLSSLPTAI  499 (556)
T ss_pred             EEEEEECChhHHHHHhhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence            999999999999999999953 33333332  457898888  577776654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PLN02382 probable sucrose-phosphatase

Probab=98.63  E-value=1.2e-06  Score=72.11  Aligned_cols=56  Identities=18%  Similarity=0.201  Sum_probs=44.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhc---CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          138 LNPTNKTTGQELQLISMLRMV---AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~---~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                      ....+++..|..++..+++++   |++++++++|||+.||++|.+.+|..++.+.++.+
T Consensus       167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~  225 (413)
T PLN02382        167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE  225 (413)
T ss_pred             EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence            344445556678888888998   99999999999999999999999955677766653

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.62  E-value=2.2e-08  Score=71.77  Aligned_cols=96  Identities=18%  Similarity=0.104  Sum_probs=78.3

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      +...||+.++|+.+...  .+|.|++.+.++..++++++... +|+.+++.++....++    .  +.+.++.+|.++++
T Consensus        41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~----~--~~K~L~~l~~~~~~  114 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNG----K--YVKDLSLVGKDLSK  114 (162)
T ss_pred             EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCC----C--EEeEchhcCCChhh
Confidence            45679999999998654  78999999999999999999776 8888888776554443    1  33446788999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEec
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVG  189 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~  189 (238)
                      +++|||++.++.++...|+.+....
T Consensus       115 vIiVDD~~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       115 VIIIDNSPYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             EEEEeCChhhhccCccCEeecCCCC
Confidence            9999999999999999998766554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.62  E-value=1.7e-07  Score=82.93  Aligned_cols=76  Identities=16%  Similarity=0.169  Sum_probs=55.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      +....+...|...+..+++  +++++.+++|||+.||+.|.+.++.....+..+.....|++++++.+|+.++|..+.
T Consensus       649 veV~p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~  724 (726)
T PRK14501        649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL  724 (726)
T ss_pred             EEEEECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence            3333444556777766777  778899999999999999999974323333333356789999999999888887654

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.61  E-value=8.7e-07  Score=73.12  Aligned_cols=103  Identities=17%  Similarity=0.157  Sum_probs=62.5

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---------CcccccceeeecccC-----------------C
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---------GLEDCFDGIVNFESL-----------------N  139 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---------~~~~~f~~i~~~~~~-----------------~  139 (238)
                      .+.|.+..+|+.++..   .+++||++..++..+++.+         .+.++||.|+.....                 +
T Consensus       183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g  262 (448)
T PF05761_consen  183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG  262 (448)
T ss_dssp             E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred             cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence            3457788888777644   6899999999999999865         466889998765431                 0


Q ss_pred             CC---------CCCC-CchHHHHHHHHhcCCCCCeEEEEeCCc-cc-hhHHHhcCCeEEEecCC
Q 035566          140 PT---------NKTT-GQELQLISMLRMVAHHFFQRLFFDDST-RN-IECGKSIGLHTVLVGTS  191 (238)
Q Consensus       140 ~~---------k~~~-~~~~~~~~~~~~~~~~~~~~v~vgD~~-~d-i~~a~~~G~~~i~v~~~  191 (238)
                      ..         .++. =.......+.+.+|....++++|||+. .| +.+-+..||.+++|-..
T Consensus       263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             SEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             ccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            00         0000 011234445688888889999999996 55 55555569999999553

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PTZ00174 phosphomannomutase; Provisional

Probab=98.61  E-value=1.3e-07  Score=72.78  Aligned_cols=50  Identities=16%  Similarity=0.052  Sum_probs=40.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecCC
Q 035566          138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~~  191 (238)
                      .....++..+..++..++++    ++++++|||    +.||++|.+.++..++.|.+.
T Consensus       180 leI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~  233 (247)
T PTZ00174        180 FDVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNP  233 (247)
T ss_pred             EEeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCH
Confidence            45555666778888888777    589999999    899999999988877888754

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.58  E-value=3.6e-07  Score=70.25  Aligned_cols=53  Identities=23%  Similarity=0.154  Sum_probs=38.0

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ...++...|...+..+++++++++++++++|||-||+.|. ..+.+.|.|.+..
T Consensus       158 dilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~  210 (247)
T PF05116_consen  158 DILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ  210 (247)
T ss_dssp             EEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred             EEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence            3343444556667767999999999999999999999999 6666888887755

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.56  E-value=1.3e-06  Score=62.36  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=50.6

Q ss_pred             CeEEEecC-------ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhc--CCCCCeEEEEeCCc-c
Q 035566          104 RKVIFSNA-------DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMV--AHHFFQRLFFDDST-R  173 (238)
Q Consensus       104 ~~~i~t~~-------~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~--~~~~~~~v~vgD~~-~  173 (238)
                      +.+|+||+       ....++.+-+.+|+.    .+...    ..||  .....+.++....  ...|+++++|||.. .
T Consensus        79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T  148 (168)
T PF09419_consen   79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFT  148 (168)
T ss_pred             eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence            57899997       355666667777743    22111    2233  1222333333222  24699999999996 6


Q ss_pred             chhHHHhcCCeEEEecCC
Q 035566          174 NIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~  191 (238)
                      |+-+|...|+.++++..|
T Consensus       149 DVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  149 DVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             HHHHhhccCceEEEEecC
Confidence            799999999999999776

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.55  E-value=4.1e-07  Score=78.05  Aligned_cols=108  Identities=13%  Similarity=0.228  Sum_probs=77.3

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      .+++|++.+.++.|+..   .+++|+.+....+.+.+++|++ +|.     +    ..|  .++..   .++++..++++
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~----~~p--~~K~~---~v~~l~~~~~~  468 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E----VLP--DDKAA---LIKELQEKGRV  468 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c----CCh--HHHHH---HHHHHHHcCCE
Confidence            35689999999888654   5799999999999999999985 221     1    112  11222   23444446789


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      ++||||+.||+.+++.+|+. +.++.+.+  ...+|+++.  ++.++.+++
T Consensus       469 v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~~~~l~~l~~~i  518 (562)
T TIGR01511       469 VAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLMRNDLNDVATAI  518 (562)
T ss_pred             EEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence            99999999999999999974 44544433  567898884  777777665

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PLN02423 phosphomannomutase

Probab=98.55  E-value=1.7e-06  Score=66.51  Aligned_cols=49  Identities=18%  Similarity=0.060  Sum_probs=38.6

Q ss_pred             cCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecC
Q 035566          137 SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       137 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~  190 (238)
                      ..+...|+..+..++..++     +++++++|||    +.||++|.+.-|+.++-|..
T Consensus       180 ~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~  232 (245)
T PLN02423        180 SFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS  232 (245)
T ss_pred             EEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence            3455556666677776555     8899999999    79999999998988877744

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.53  E-value=8.7e-07  Score=59.15  Aligned_cols=114  Identities=11%  Similarity=0.130  Sum_probs=83.6

Q ss_pred             CCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      .-+.++.+.+.++.|+.  ..+|.|+.....+....+..|+.  .+.++...           .+.... +++.++-+-+
T Consensus        28 gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~a-----------~~e~K~~ii~eLkk~~~   94 (152)
T COG4087          28 GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAGA-----------DPEMKAKIIRELKKRYE   94 (152)
T ss_pred             CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeeccc-----------CHHHHHHHHHHhcCCCc
Confidence            34567777777777654  46788888888888888888865  44444433           222222 4677776668


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHH
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~  213 (238)
                      .++||||+.||+.+.+.+.+..+-+.....    ...||+++.++.|+.+++..
T Consensus        95 k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~  148 (152)
T COG4087          95 KVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD  148 (152)
T ss_pred             EEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence            999999999999999999988777765442    35699999999999887643

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.48  E-value=8e-07  Score=68.24  Aligned_cols=89  Identities=11%  Similarity=-0.001  Sum_probs=68.8

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHH--HHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVA--KVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAH  160 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~--~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~  160 (238)
                      ...++||+.++|+.|+.+   .+++||+++....  ..++++|+.. +|+.++++....        ...+...+++++.
T Consensus        22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~--------~~~l~~~~~~~~~   93 (242)
T TIGR01459        22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA--------VQMILESKKRFDI   93 (242)
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------HHHHHhhhhhccC
Confidence            356799999999998754   5799998877655  7889999997 899988876422        1223334577888


Q ss_pred             CCCeEEEEeCCccchhHHHhcCC
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~  183 (238)
                      +++++++|||+..|+.....+|.
T Consensus        94 ~~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        94 RNGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             CCceEEEeCCcccchhhhcCCCc
Confidence            89999999999999888766654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.47  E-value=4.9e-07  Score=64.54  Aligned_cols=88  Identities=14%  Similarity=0.212  Sum_probs=51.5

Q ss_pred             hhHHHHHhcCC---CCeEEEecCC---h-----------HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566           92 PVLRNLLLSLP---IRKVIFSNAD---E-----------IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM  154 (238)
Q Consensus        92 ~~~~~~l~~l~---~~~~i~t~~~---~-----------~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~  154 (238)
                      +++.+.|+.+.   ..++|+||..   .           ..+..+++.+++.  +..+.........||    .++++..
T Consensus        32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP----~~GM~~~  105 (159)
T PF08645_consen   32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKP----NPGMWEF  105 (159)
T ss_dssp             TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTT----SSHHHHH
T ss_pred             hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCC----chhHHHH
Confidence            34556666554   3467888851   1           2344555666655  333444444455655    6777775


Q ss_pred             -HHhcC----CCCCeEEEEeCC-----------ccchhHHHhcCCeE
Q 035566          155 -LRMVA----HHFFQRLFFDDS-----------TRNIECGKSIGLHT  185 (238)
Q Consensus       155 -~~~~~----~~~~~~v~vgD~-----------~~di~~a~~~G~~~  185 (238)
                       ++.++    ++.++++||||.           ..|...|.++|++.
T Consensus       106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen  106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence             55665    588999999996           57799999999864

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.46  E-value=7.2e-07  Score=59.49  Aligned_cols=85  Identities=21%  Similarity=0.078  Sum_probs=62.6

Q ss_pred             CCCChhHHHHHhcCCCCeEEEec---CChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHH------Hhc
Q 035566           88 LKPDPVLRNLLLSLPIRKVIFSN---ADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISML------RMV  158 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~------~~~  158 (238)
                      +..+|.+++++++++.+++|++.   +....+-+.++.+++..||+.++.-..       +-+...+.+++      +..
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh-------P~K~~ML~~llr~i~~er~~  112 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH-------PYKFLMLSQLLREINTERNQ  112 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC-------ChhHHHHHHHHHHHHHhhcc
Confidence            56789999999999998876554   566777788999999999998876432       12344444444      345


Q ss_pred             CCCCCeEEEEeCCccchhHHH
Q 035566          159 AHHFFQRLFFDDSTRNIECGK  179 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~  179 (238)
                      .+.|.++++++|..-.+.-..
T Consensus       113 ~ikP~~Ivy~DDR~iH~~~Iw  133 (164)
T COG4996         113 KIKPSEIVYLDDRRIHFGNIW  133 (164)
T ss_pred             ccCcceEEEEecccccHHHHH
Confidence            579999999999976655444

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.46  E-value=1.1e-06  Score=67.47  Aligned_cols=69  Identities=13%  Similarity=0.200  Sum_probs=59.0

Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc-------CCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI-------GLHTVLVGTSRRTKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~-------G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~  214 (238)
                      .|...+..+++.++++++++++|||+.+|+.|++.+       |..++.|..+..+..|++++++.+++.+++..+
T Consensus       167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l  242 (244)
T TIGR00685       167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL  242 (244)
T ss_pred             CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence            445667777999999999999999999999999988       667888876666788999999999999888664

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.42  E-value=2.1e-06  Score=66.31  Aligned_cols=46  Identities=30%  Similarity=0.366  Sum_probs=36.8

Q ss_pred             hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc
Q 035566           92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES  137 (238)
Q Consensus        92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~  137 (238)
                      |++.++|++|+.+   .+|+|++++..+...++.+|+..+|+.++++++
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~  199 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR  199 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence            5566666666554   579999999999999999999999998877665

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.37  E-value=8.2e-06  Score=61.28  Aligned_cols=99  Identities=10%  Similarity=-0.071  Sum_probs=56.7

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAH  160 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~  160 (238)
                      ..++.|++.++++.++.+   .+++|+.+...   +...|...|+..+ +.++-.......+....-+.+.+..+.+-|.
T Consensus       118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GY  196 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGY  196 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCc
Confidence            457889999999988754   56889887655   5566777887754 4444332111221100002222322233333


Q ss_pred             CCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGLHTVLVG  189 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~  189 (238)
                        .=+..|||..+|+.. ..+|.++.-..
T Consensus       197 --rIv~~iGDq~sDl~G-~~~~~RtFKLP  222 (229)
T TIGR01675       197 --RIWGNIGDQWSDLLG-SPPGRRTFKLP  222 (229)
T ss_pred             --eEEEEECCChHHhcC-CCccCceeeCC
Confidence              225669999999854 34555555443

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.34  E-value=1.3e-06  Score=78.79  Aligned_cols=121  Identities=17%  Similarity=0.249  Sum_probs=82.6

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC--------------CCCchHHH
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK--------------TTGQELQL  151 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~--------------~~~~~~~~  151 (238)
                      ++.|++.+.++.++..   ..++|+.....+..+.+.+|+...++.++++.+....+.              ...|... 
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K-  606 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK-  606 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH-
Confidence            6689999999888755   569999999999999999999876665544433322110              0001111 


Q ss_pred             HHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Cccccccc--cChhHHHHHh
Q 035566          152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYAL--ENIHNIREAF  211 (238)
Q Consensus       152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~--~~~~el~~~l  211 (238)
                      ..+++.+.-..+.+.|+||+.||..+++.+++. +.++ .+..  +..||+++  +++..+...+
T Consensus       607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVG-ia~g~~g~~va~~aaDivl~dd~~~~i~~~i  670 (884)
T TIGR01522       607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIG-VAMGQTGTDVAKEAADMILTDDDFATILSAI  670 (884)
T ss_pred             HHHHHHHHHCCCEEEEECCCcccHHHHHhCCee-EecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence            223344444457899999999999999999974 4443 2332  56789999  5688887765

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.31  E-value=2.5e-06  Score=76.69  Aligned_cols=109  Identities=9%  Similarity=0.141  Sum_probs=78.5

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +++|++.+.++.++..   .+++|+........+.+++|+..+|..+.         |    .. -.+.++.++..++++
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~---------p----~~-K~~~i~~l~~~~~~v  715 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL---------P----DG-KAEAIKRLQSQGRQV  715 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC---------H----HH-HHHHHHHHhhcCCEE
Confidence            5678999998888654   56999999999999999999876443221         1    11 123456677778899


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc--cccChhHHHHHhH
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY--ALENIHNIREAFP  212 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~--v~~~~~el~~~l~  212 (238)
                      +||||+.||+.+++.+|+ .+.++++..  ...+|.  ..+++.++..++.
T Consensus       716 ~~vGDg~nD~~al~~Agv-gia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~  765 (834)
T PRK10671        716 AMVGDGINDAPALAQADV-GIAMGGGSDVAIETAAITLMRHSLMGVADALA  765 (834)
T ss_pred             EEEeCCHHHHHHHHhCCe-eEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence            999999999999999998 455544442  444554  4467777777663

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.28  E-value=4.8e-05  Score=63.99  Aligned_cols=96  Identities=14%  Similarity=0.110  Sum_probs=57.1

Q ss_pred             CChhHHHHHhcCCCCeEEEecCChHHHHHHHHh-cCccccc--------ceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566           90 PDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK-LGLEDCF--------DGIVNFESLNPTNKTTGQELQLISMLRMVAH  160 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~-~~~~~~f--------~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~  160 (238)
                      ..+...+.+++.+. .+++|.+++..++...+. +|++..+        +..+++.-.+.. . -.-......+.+.+|.
T Consensus       111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~-~-c~Ge~Kv~rl~~~~g~  187 (497)
T PLN02177        111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPG-V-LVGDHKRDAVLKEFGD  187 (497)
T ss_pred             cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCC-C-CccHHHHHHHHHHhCC
Confidence            44666666666543 489999999999999975 7866321        222222211100 0 0012223333345564


Q ss_pred             CCCeEEEEeCCccchhHHHhcCCeEEEecC
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~  190 (238)
                      +... +++|||.+|..+...++- .+.|+.
T Consensus       188 ~~~~-~aYgDS~sD~plL~~a~e-~y~V~~  215 (497)
T PLN02177        188 ALPD-LGLGDRETDHDFMSICKE-GYMVPR  215 (497)
T ss_pred             CCce-EEEECCccHHHHHHhCCc-cEEeCC
Confidence            4444 899999999999999995 455544

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=98.28  E-value=4.6e-07  Score=63.05  Aligned_cols=111  Identities=16%  Similarity=0.174  Sum_probs=66.5

Q ss_pred             hhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-cccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566           92 PVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF  168 (238)
Q Consensus        92 ~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v  168 (238)
                      .++...|..+++.  ++.+|.............+... ..++.+...+      .    +.. ...++.++++    +++
T Consensus        75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g------~----h~K-V~~vrth~id----lf~  139 (194)
T COG5663          75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG------L----HHK-VEAVRTHNID----LFF  139 (194)
T ss_pred             HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc------c----ccc-chhhHhhccC----ccc
Confidence            4566666666544  5566665444443333333222 1233333222      1    111 2345778886    899


Q ss_pred             eCCccc-hhHHHhcCCeEEEecCCCC-Ccccc--ccccChhHHHHHhHHhhhc
Q 035566          169 DDSTRN-IECGKSIGLHTVLVGTSRR-TKGAD--YALENIHNIREAFPELWDA  217 (238)
Q Consensus       169 gD~~~d-i~~a~~~G~~~i~v~~~~~-~~~ad--~v~~~~~el~~~l~~~~~~  217 (238)
                      .|+..+ ++.|+.+|++.+.+++.+. ++.+.  ..+..+.|..+.+...+++
T Consensus       140 ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~kR  192 (194)
T COG5663         140 EDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLKR  192 (194)
T ss_pred             cccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhcc
Confidence            999888 8888889999999999886 44333  4455777777777765554

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=98.17  E-value=3.8e-06  Score=74.96  Aligned_cols=72  Identities=17%  Similarity=0.129  Sum_probs=54.4

Q ss_pred             CCCCchHHHHHHH---HhcCCCCCeEEEEeCCccchhHHHhcCC-------------eEEEecCCCCCccccccccChhH
Q 035566          143 KTTGQELQLISML---RMVAHHFFQRLFFDDSTRNIECGKSIGL-------------HTVLVGTSRRTKGADYALENIHN  206 (238)
Q Consensus       143 ~~~~~~~~~~~~~---~~~~~~~~~~v~vgD~~~di~~a~~~G~-------------~~i~v~~~~~~~~ad~v~~~~~e  206 (238)
                      ++..|...+..++   +.+|++++.+++|||..||..|.+.++-             -+|.|+  .....|.+.+++.+|
T Consensus       759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~e  836 (854)
T PLN02205        759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAE  836 (854)
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHH
Confidence            3445566666665   4468999999999999999999998762             234454  345788999999999


Q ss_pred             HHHHhHHhhh
Q 035566          207 IREAFPELWD  216 (238)
Q Consensus       207 l~~~l~~~~~  216 (238)
                      +.++|..+..
T Consensus       837 V~~lL~~L~~  846 (854)
T PLN02205        837 IVRLMQGLAS  846 (854)
T ss_pred             HHHHHHHHHh
Confidence            9998877654

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.10  E-value=4.4e-06  Score=63.34  Aligned_cols=90  Identities=12%  Similarity=0.015  Sum_probs=50.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChH---HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      ++.|++.++++.++.+   ++++|+.+..   ....-|+..|+..+-..+.-.......+.....+......+++-|.. 
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~-  193 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR-  193 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE-
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc-
Confidence            6778999999888655   4689986543   55566777787644333333332211111111122333333333432 


Q ss_pred             CeEEEEeCCccchhHHHh
Q 035566          163 FQRLFFDDSTRNIECGKS  180 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~  180 (238)
                       =++.|||..+|+..++.
T Consensus       194 -Ii~~iGD~~~D~~~~~~  210 (229)
T PF03767_consen  194 -IIANIGDQLSDFSGAKT  210 (229)
T ss_dssp             -EEEEEESSGGGCHCTHH
T ss_pred             -EEEEeCCCHHHhhcccc
Confidence             26789999999888443

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PLN03017 trehalose-phosphatase

Probab=98.05  E-value=0.00013  Score=58.60  Aligned_cols=71  Identities=14%  Similarity=0.199  Sum_probs=52.9

Q ss_pred             CchHHHHHHHHhcCCCC---CeEEEEeCCccchhHHHhcC----CeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566          146 GQELQLISMLRMVAHHF---FQRLFFDDSTRNIECGKSIG----LHTVLVGTSRRTKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~---~~~v~vgD~~~di~~a~~~G----~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      .|...+..+++.+++..   .-.+|+||-..|-.+.+.+.    --+|.|+.......|.|.+++.+|+.++|..+..
T Consensus       283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~  360 (366)
T PLN03017        283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE  360 (366)
T ss_pred             CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence            45677777788888653   35899999999977777652    2356676544567899999999999998876643

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.00  E-value=0.00012  Score=56.22  Aligned_cols=103  Identities=8%  Similarity=-0.013  Sum_probs=54.9

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHhcCcccccceeeecccCCCCC-CCCCchHHHHHHHHhc
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESLNPTN-KTTGQELQLISMLRMV  158 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~~~~k-~~~~~~~~~~~~~~~~  158 (238)
                      ...++.|++.++.+.++.+   .+++|+.....   ...-|+..|+..+ +.++-.......+ ...+.+......+.+-
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e  220 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE  220 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence            3467889999999888654   56889986543   3445556676543 4333322211111 1001111222222333


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      |.  .=+..|||..+|+......+-++.-..++
T Consensus       221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             Cc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence            43  23567999999995544223455555444

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.99  E-value=1.5e-05  Score=70.72  Aligned_cols=106  Identities=12%  Similarity=0.172  Sum_probs=72.4

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +++|++.+.++.|+..   .+++|+........+.+.+|+..++.          ..|.  .+..   +++.+. .+.++
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~----------~~p~--~K~~---~v~~l~-~~~~v  631 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG----------LLPE--DKVK---AVTELN-QHAPL  631 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC----------CCHH--HHHH---HHHHHh-cCCCE
Confidence            6689999999888654   57999999999999999999863221          1120  1222   234444 33689


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l  211 (238)
                      +||||+.||..+++.+++. +.++.+..  ...+|.++  +++.+|.+++
T Consensus       632 ~mvGDgiNDapAl~~A~vg-ia~g~~~~~a~~~adivl~~~~l~~l~~~i  680 (741)
T PRK11033        632 AMVGDGINDAPAMKAASIG-IAMGSGTDVALETADAALTHNRLRGLAQMI  680 (741)
T ss_pred             EEEECCHHhHHHHHhCCee-EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence            9999999999999999964 44444432  44567655  4576666554

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.97  E-value=3.7e-05  Score=69.89  Aligned_cols=121  Identities=9%  Similarity=0.141  Sum_probs=77.9

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc----ceeeecccCCCCCC--------------CCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF----DGIVNFESLNPTNK--------------TTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~k~--------------~~~~  147 (238)
                      ++.+++.+.++.++..   ..++|+........+.+.+|+...-    ...+.+.......+              ...|
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P  616 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP  616 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence            5678999999888755   4688988888999999999985311    11122111110000              0001


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccC--hhHHHHHh
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALEN--IHNIREAF  211 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~--~~el~~~l  211 (238)
                      ... .++++.++-..+.+.|+||+.||+.|.+.+++ .+.++.+.+  +..||+++.+  +..+.+++
T Consensus       617 ~~K-~~iV~~lq~~g~~va~iGDG~ND~~alk~AdV-Gia~g~g~~~ak~aAD~vl~dd~f~~i~~~i  682 (917)
T TIGR01116       617 SHK-SELVELLQEQGEIVAMTGDGVNDAPALKKADI-GIAMGSGTEVAKEASDMVLADDNFATIVAAV  682 (917)
T ss_pred             HHH-HHHHHHHHhcCCeEEEecCCcchHHHHHhCCe-eEECCCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence            111 23345555455778889999999999999998 455555543  5679999987  77777655

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.97  E-value=0.00017  Score=53.26  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=31.6

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCc
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGL  125 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~  125 (238)
                      .+..||+.+.++.++..  -+++|.+..+++..+..++|+
T Consensus        82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence            56779999999999874  578888888999888888775

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.79  E-value=3.6e-06  Score=60.27  Aligned_cols=88  Identities=22%  Similarity=0.195  Sum_probs=57.9

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCc-ccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGL-EDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~-~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      +...||+.++|+.+.  ...+|.|.+...++..+++.+.- ..+|+.+++.+.....+.   ..   .+-++.+|.++++
T Consensus        35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~---~~---~KdL~~l~~~~~~  108 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG---SY---IKDLSKLGRDLDN  108 (159)
T ss_dssp             EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT---EE---E--GGGSSS-GGG
T ss_pred             EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccc---cc---ccchHHHhhcccc
Confidence            345699999999885  44789999999999999999876 467888877665432211   00   1335677778899


Q ss_pred             EEEEeCCccchhHHHhc
Q 035566          165 RLFFDDSTRNIECGKSI  181 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~  181 (238)
                      +|+|+|++.-...-...
T Consensus       109 vvivDD~~~~~~~~~~N  125 (159)
T PF03031_consen  109 VVIVDDSPRKWALQPDN  125 (159)
T ss_dssp             EEEEES-GGGGTTSGGG
T ss_pred             EEEEeCCHHHeeccCCc
Confidence            99999998864433333

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.77  E-value=0.00011  Score=51.98  Aligned_cols=87  Identities=11%  Similarity=0.082  Sum_probs=50.3

Q ss_pred             HHHHHhcCC---CCeEEEecCChHHHHHHH----HhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566           94 LRNLLLSLP---IRKVIFSNADEIHVAKVL----RKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL  166 (238)
Q Consensus        94 ~~~~l~~l~---~~~~i~t~~~~~~~~~~l----~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v  166 (238)
                      +++++....   .+.+.+|+.....++.+.    +.+.+.+....++.++.-   +|.-..+   -.++...++    -+
T Consensus       119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~K---t~~i~~~~~----~I  188 (237)
T COG3700         119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTK---TQWIQDKNI----RI  188 (237)
T ss_pred             HHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---Ccccccc---cHHHHhcCc----eE
Confidence            444554332   346788887665444333    344554444444444321   2211111   123456665    49


Q ss_pred             EEeCCccchhHHHhcCCeEEEecC
Q 035566          167 FFDDSTRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       167 ~vgD~~~di~~a~~~G~~~i~v~~  190 (238)
                      +.|||.+||.+|+.+|.+.|-+-+
T Consensus       189 hYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         189 HYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             EecCCchhhhHHHhcCccceeEEe
Confidence            999999999999999999886644

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.75  E-value=0.0018  Score=49.93  Aligned_cols=48  Identities=15%  Similarity=0.175  Sum_probs=37.2

Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHh----cCCeEEEecCCCC
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKS----IGLHTVLVGTSRR  193 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~----~G~~~i~v~~~~~  193 (238)
                      .+...+..++.++|..|+.+|||+|+..++.....    .|+..+++.....
T Consensus       162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~  213 (252)
T PF11019_consen  162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA  213 (252)
T ss_pred             ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence            34566666799999999999999999999765544    5888887766543

The function is not known.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.73  E-value=0.0001  Score=64.30  Aligned_cols=108  Identities=13%  Similarity=0.112  Sum_probs=74.4

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|++.+.+++++..   ..++|+........+.+.+|++++|-.         ..|    ... .++.+.+.-..+-+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~---------~~P----edK-~~iV~~lQ~~G~~V  506 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE---------CKP----EDK-INVIREEQAKGHIV  506 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC---------CCH----HHH-HHHHHHHHhCCCEE
Confidence            5678999988888754   568999999999999999998753321         111    222 22233333334568


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      .|+||+.||..+.+.+.+ .+.++++..  ++.+|.+.-  ++..+.+.+
T Consensus       507 aMtGDGvNDAPALa~ADV-GIAMgsGTdvAkeAADiVLldd~ls~Iv~av  555 (673)
T PRK14010        507 AMTGDGTNDAPALAEANV-GLAMNSGTMSAKEAANLIDLDSNPTKLMEVV  555 (673)
T ss_pred             EEECCChhhHHHHHhCCE-EEEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence            899999999999999997 455655543  667787763  466665554

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.68  E-value=0.00013  Score=63.48  Aligned_cols=108  Identities=10%  Similarity=0.123  Sum_probs=72.6

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|++.+.+++++..   .+++|+........+.+.+|+++++-.         ..|  ..+..+.+.++.   ..+.+
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~---------~~P--edK~~~v~~lq~---~g~~V  511 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE---------ATP--EDKIALIRQEQA---EGKLV  511 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC---------CCH--HHHHHHHHHHHH---cCCeE
Confidence            5678999998888755   568999999999999999998654321         112  012222222222   23469


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      .|+||+.||..+.+.+++. +.++.+..  +..+|.+.-  ++..+.+.+
T Consensus       512 amvGDG~NDapAL~~AdvG-iAm~~gt~~akeaadivLldd~~s~Iv~av  560 (675)
T TIGR01497       512 AMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAANMVDLDSDPTKLIEVV  560 (675)
T ss_pred             EEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence            9999999999999999985 55555443  556776653  355555544

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.65  E-value=0.00023  Score=62.38  Aligned_cols=108  Identities=13%  Similarity=0.226  Sum_probs=74.0

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|+..+.++.|+..   .+++|+..+...+.+.+.+|+++++-.+..             ..... .++++.-..+.+
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP-------------edK~~-~V~~l~~~g~~V  602 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP-------------EDKAE-IVRELQAEGRKV  602 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc-------------HHHHH-HHHHHHhcCCEE
Confidence            4568888888777654   579999999999999999998755333321             22221 223333333689


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l  211 (238)
                      .||||+.||-.+...+.+ .+.++.|.  ..+.||.++-  ++..+...+
T Consensus       603 amVGDGINDAPALA~AdV-GiAmG~GtDvA~eaADvvL~~~dL~~v~~ai  651 (713)
T COG2217         603 AMVGDGINDAPALAAADV-GIAMGSGTDVAIEAADVVLMRDDLSAVPEAI  651 (713)
T ss_pred             EEEeCCchhHHHHhhcCe-eEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence            999999999999999987 45555544  3667776654  467666654

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.64  E-value=0.00054  Score=51.18  Aligned_cols=96  Identities=14%  Similarity=0.188  Sum_probs=57.2

Q ss_pred             CChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHH----HHHHHHhcCcccccceeeecccCCCCC
Q 035566           70 FDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIH----VAKVLRKLGLEDCFDGIVNFESLNPTN  142 (238)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~----~~~~l~~~~~~~~f~~i~~~~~~~~~k  142 (238)
                      .+++.|..++..    ...++.||+.++++....+   .+.+||.....    ...-|...|+....+..+..-      
T Consensus       107 f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk------  176 (274)
T COG2503         107 FTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK------  176 (274)
T ss_pred             CCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe------
Confidence            334445555443    3467889999999988655   46888876554    345567777775443322111      


Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHH
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECG  178 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a  178 (238)
                      +..++...-++.+++   .-+-++.|||+..|....
T Consensus       177 k~~k~Ke~R~~~v~k---~~~iVm~vGDNl~DF~d~  209 (274)
T COG2503         177 KDKKSKEVRRQAVEK---DYKIVMLVGDNLDDFGDN  209 (274)
T ss_pred             eCCCcHHHHHHHHhh---ccceeeEecCchhhhcch
Confidence            222234444444444   345688899999886443

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=97.62  E-value=0.00054  Score=54.96  Aligned_cols=99  Identities=16%  Similarity=0.040  Sum_probs=64.0

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhc---Ccccccceeeeccc-----------------CCC------CCC---C
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFES-----------------LNP------TNK---T  144 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~-----------------~~~------~k~---~  144 (238)
                      ....++...++.++.||+...+....+.++   ++..+|+.++....                 .+.      .+|   .
T Consensus       206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~  285 (424)
T KOG2469|consen  206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQG  285 (424)
T ss_pred             chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhc
Confidence            344445555667999999888877776643   56677877665431                 000      001   1


Q ss_pred             CCchHHHHH-HHHhcCCCCCeEEEEeCCccc--hhHHHhcCCeEEEecCCC
Q 035566          145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRN--IECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~d--i~~a~~~G~~~i~v~~~~  192 (238)
                      +...++... ++..++....+++++||+..+  +..-+.-||.+++|...-
T Consensus       286 ~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL  336 (424)
T KOG2469|consen  286 GVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL  336 (424)
T ss_pred             ccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence            112223333 467788878999999999876  777788999999886543

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.55  E-value=0.00027  Score=61.74  Aligned_cols=108  Identities=13%  Similarity=0.164  Sum_probs=74.3

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|++.+.+++|+..   ..++|+........+.+.+|++++|-.         ..|    .... ++.+.+.-..+-+
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~---------~~P----edK~-~iV~~lQ~~G~~V  510 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAE---------ATP----EDKL-ALIRQEQAEGRLV  510 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEcc---------CCH----HHHH-HHHHHHHHcCCeE
Confidence            4578999998888755   568999999999999999998653211         111    2221 2233333334568


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      .|+||+.||-.+.+.+.+. +.+++|..  ++.+|.+.-  ++..+.+.+
T Consensus       511 aMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~~s~Iv~av  559 (679)
T PRK01122        511 AMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLDSNPTKLIEVV  559 (679)
T ss_pred             EEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence            9999999999999999974 55555543  677887764  466666655

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.51  E-value=0.0021  Score=42.12  Aligned_cols=79  Identities=20%  Similarity=0.116  Sum_probs=43.0

Q ss_pred             ChhHHHHHhcCC---CCeEEEecCCh---HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           91 DPVLRNLLLSLP---IRKVIFSNADE---IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        91 ~~~~~~~l~~l~---~~~~i~t~~~~---~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      +||+.++++.|+   .+.+++||++.   ......++.+|+.---+.++++.            .....++++. .....
T Consensus        16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~------------~~~~~~l~~~-~~~~~   82 (101)
T PF13344_consen   16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG------------MAAAEYLKEH-KGGKK   82 (101)
T ss_dssp             -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH------------HHHHHHHHHH-TTSSE
T ss_pred             CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH------------HHHHHHHHhc-CCCCE
Confidence            355555555553   45689999853   34455667888875455666544            2233333332 23567


Q ss_pred             EEEEeCCccchhHHHhcCC
Q 035566          165 RLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~  183 (238)
                      ++++|-. ...+.++.+|+
T Consensus        83 v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   83 VYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             EEEES-H-HHHHHHHHTTE
T ss_pred             EEEEcCH-HHHHHHHHcCC
Confidence            8888854 44666666664

...

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.43  E-value=0.00027  Score=50.26  Aligned_cols=82  Identities=15%  Similarity=0.192  Sum_probs=59.8

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-ccc-ceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCF-DGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      .+.++||+.++|+.++..  .+|+|++.+.++..+++.++.. .+| +.+++.++..  .+..|.      +-..++.+.
T Consensus        56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~--~~~~Kd------L~~i~~~d~  127 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG--SPHTKS------LLRLFPADE  127 (156)
T ss_pred             EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC--CCcccc------HHHHcCCCc
Confidence            357789999999998644  6899999999999999999988 478 6677665432  111111      113357788


Q ss_pred             CeEEEEeCCccchh
Q 035566          163 FQRLFFDDSTRNIE  176 (238)
Q Consensus       163 ~~~v~vgD~~~di~  176 (238)
                      +.+++|+|++.--.
T Consensus       128 ~~vvivDd~~~~~~  141 (156)
T TIGR02250       128 SMVVIIDDREDVWP  141 (156)
T ss_pred             ccEEEEeCCHHHhh
Confidence            99999999975433

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.40  E-value=0.00051  Score=62.44  Aligned_cols=115  Identities=16%  Similarity=0.206  Sum_probs=74.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~  147 (238)
                      ++.|++.+.++.++..   ..++|+........+.+.+|+..  +.++++.+...                  ..|  ..
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sP--e~  625 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTP--LQ  625 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCH--HH
Confidence            5678888888888755   46899988899999999999852  12222222111                  011  11


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHh
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAF  211 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l  211 (238)
                      +..+.+.+++   ..+-+.|+||+.||..+.+.+.+. |.++.+..  +..||.++  +++..+...+
T Consensus       626 K~~iV~~Lq~---~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~f~~Iv~ai  689 (903)
T PRK15122        626 KSRVLKALQA---NGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLEKSLMVLEEGV  689 (903)
T ss_pred             HHHHHHHHHh---CCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEecCChHHHHHHH
Confidence            2222223333   345789999999999999999985 55555443  77788887  4566665544

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.39  E-value=0.00064  Score=61.64  Aligned_cols=115  Identities=14%  Similarity=0.235  Sum_probs=73.8

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~  147 (238)
                      ++.|++.+.++.++..   ..++|+........+.+.+|+..  +.++.+.+...                  ..|  ..
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~P--e~  590 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTP--MQ  590 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCH--HH
Confidence            5678898888888765   46899988899999999999862  12222221111                  111  11


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      +..+.+.+++.   .+.+.|+||+.||..+.+.+++. +.++.+..  +..||.++-  ++..+...+
T Consensus       591 K~~iV~~lq~~---G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLldd~~~~I~~ai  654 (867)
T TIGR01524       591 KSRIIGLLKKA---GHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLEKSLMVLEEGV  654 (867)
T ss_pred             HHHHHHHHHhC---CCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEecCChHHHHHHH
Confidence            22233333333   35789999999999999999985 55555443  677887774  455554443

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PLN02580 trehalose-phosphatase

Probab=97.32  E-value=0.00093  Score=54.29  Aligned_cols=72  Identities=15%  Similarity=0.192  Sum_probs=57.0

Q ss_pred             CCCchHHHHHHHHhcCCCCCe---EEEEeCCccchhHHHh-----cCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566          144 TTGQELQLISMLRMVAHHFFQ---RLFFDDSTRNIECGKS-----IGLHTVLVGTSRRTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~---~v~vgD~~~di~~a~~-----~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      ...|...+..+++.+|++..+   .++|||..+|..|.+.     .|+ +|.|.++.....|.|.+++.+|+.++|..+.
T Consensus       299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~  377 (384)
T PLN02580        299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV  377 (384)
T ss_pred             CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence            345677888889999987653   3899999999999986     354 5677766667789999999999999887654


Q ss_pred             h
Q 035566          216 D  216 (238)
Q Consensus       216 ~  216 (238)
                      .
T Consensus       378 ~  378 (384)
T PLN02580        378 T  378 (384)
T ss_pred             H
Confidence            3

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=97.31  E-value=0.00083  Score=61.07  Aligned_cols=115  Identities=16%  Similarity=0.217  Sum_probs=74.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~  147 (238)
                      ++.|++.+.++.++..   ..++|+........+.+.+|+..  +.++++.+...                  ..|  ..
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sP--e~  625 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTP--MH  625 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCH--HH
Confidence            5578888888888755   46899999999999999999852  22333222211                  111  11


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      +..+.+.+++   ..+-+.|+||+.||..+.+.+.+. |.++.+..  +..||.++-  ++..+.+.+
T Consensus       626 K~~IV~~Lq~---~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~~~~I~~ai  689 (902)
T PRK10517        626 KERIVTLLKR---EGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLEKSLMVLEEGV  689 (902)
T ss_pred             HHHHHHHHHH---CCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence            2222222333   335689999999999999999984 55555543  677888774  455555443

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.24  E-value=0.0033  Score=48.32  Aligned_cols=46  Identities=30%  Similarity=0.398  Sum_probs=33.4

Q ss_pred             hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc
Q 035566           92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES  137 (238)
Q Consensus        92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~  137 (238)
                      |.+.+.|..|+..   +++-|.|.+.++...++.+++.++||.+++.+.
T Consensus       145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~  193 (297)
T PF05152_consen  145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGN  193 (297)
T ss_pred             hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCc
Confidence            3444555555544   467888888899888998888888888876553

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=97.19  E-value=0.0015  Score=58.39  Aligned_cols=114  Identities=13%  Similarity=0.131  Sum_probs=72.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC------------------------CCC
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL------------------------NPT  141 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~------------------------~~~  141 (238)
                      ++.|++.+.++.++..   ..++|+........+.+.+|+.+.   +++.+..                        ...
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence            6678899888888755   568999999999999999998642   1111111                        001


Q ss_pred             CCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          142 NKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       142 k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      .|  ..+..+   .+.+.-..+.+.|+||+.||..+.+.+.+. +.++.+..  +..||.++-  ++..+...+
T Consensus       519 ~P--e~K~~i---V~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~d~l~~I~~ai  586 (755)
T TIGR01647       519 FP--EHKYEI---VEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTEPGLSVIVDAI  586 (755)
T ss_pred             CH--HHHHHH---HHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEcCChHHHHHHH
Confidence            11  011122   233333346799999999999999999985 55555443  666786664  355554443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=97.15  E-value=0.0021  Score=47.71  Aligned_cols=100  Identities=12%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcC---cccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLG---LEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~---~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      ..++++...++.++..   ++|.|++....+..+..+-+   +..+++.++.. ..+...    ....++.+.+.+|.++
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~----e~~sy~~I~~~Ig~s~  197 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIGLKV----ESQSYKKIGHLIGKSP  197 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccccee----hhHHHHHHHHHhCCCh
Confidence            5678899999888754   56777766555544444332   22233333221 122211    1334555689999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                      .++++.-|-++...+|+.+|+.+..+.++.+
T Consensus       198 ~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn  228 (254)
T KOG2630|consen  198 REILFLTDVPREAAAARKAGLQAGLVSRPGN  228 (254)
T ss_pred             hheEEeccChHHHHHHHhcccceeeeecCCC
Confidence            9999999999999999999999988866654

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.05  E-value=0.0023  Score=58.75  Aligned_cols=117  Identities=14%  Similarity=0.076  Sum_probs=75.9

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC------------------CCCCCCCc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN------------------PTNKTTGQ  147 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~k~~~~~  147 (238)
                      ++.|++.+.++.++..   ..++|+.....+..+.+.+|+...-..++.+.+..                  ...|  ..
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sP--e~  656 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSP--LD  656 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCH--HH
Confidence            5678888888888655   46899988999999999999863211222222111                  1111  11


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Ccccccccc--ChhHHHHHh
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      +..+.+.+++.   .+.+.|+||+.||..|.+.+.+. |.++ .+..  +..||+++.  ++..+...+
T Consensus       657 K~~iV~~lq~~---g~vVam~GDGvNDapALk~AdVG-IAmg~~gtdvAk~aADivL~dd~f~~I~~~i  721 (941)
T TIGR01517       657 KQLLVLMLKDM---GEVVAVTGDGTNDAPALKLADVG-FSMGISGTEVAKEASDIILLDDNFASIVRAV  721 (941)
T ss_pred             HHHHHHHHHHC---CCEEEEECCCCchHHHHHhCCcc-eecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence            22233333443   34789999999999999999875 4444 4433  677898887  677776655

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.02  E-value=0.0025  Score=58.96  Aligned_cols=119  Identities=9%  Similarity=0.066  Sum_probs=74.9

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc----------ceeeecccCCCCC-------------
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF----------DGIVNFESLNPTN-------------  142 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f----------~~i~~~~~~~~~k-------------  142 (238)
                      ++.|++.+.++.++..   ..++|+........+.+.+|+....          ..++++.......             
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V  725 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV  725 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence            5678888888888655   4689999999999999999985310          1223322221110             


Q ss_pred             ---CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCC--CCccccccccC--hhHHHHHh
Q 035566          143 ---KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSR--RTKGADYALEN--IHNIREAF  211 (238)
Q Consensus       143 ---~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~--~~~~ad~v~~~--~~el~~~l  211 (238)
                         -.+..+..+.+.+++.   .+.+.|+||+.||..|.+.+++... ++ ++.  .+..||+++.+  +..+...+
T Consensus       726 ~ar~sP~~K~~iV~~lq~~---g~~Vam~GDGvNDapaLk~AdVGIA-mg~~gt~vak~aADivl~dd~f~~I~~~i  798 (1053)
T TIGR01523       726 IARCAPQTKVKMIEALHRR---KAFCAMTGDGVNDSPSLKMANVGIA-MGINGSDVAKDASDIVLSDDNFASILNAI  798 (1053)
T ss_pred             EEecCHHHHHHHHHHHHhc---CCeeEEeCCCcchHHHHHhCCccEe-cCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence               0001112223333333   3568999999999999999998544 43 343  26678988864  66666654

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.02  E-value=0.005  Score=45.37  Aligned_cols=92  Identities=20%  Similarity=0.208  Sum_probs=53.1

Q ss_pred             CChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccc--cceeeecccC-------CCCCC-CCCchHHHHHHHHh
Q 035566           90 PDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDC--FDGIVNFESL-------NPTNK-TTGQELQLISMLRM  157 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~--f~~i~~~~~~-------~~~k~-~~~~~~~~~~~~~~  157 (238)
                      ..|++.++|+.+.+.  .+|.|.+...++..++..+++...  +...+.-+..       ...++ ..|+-..   +-++
T Consensus        46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~---lw~~  122 (195)
T TIGR02245        46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGV---IWAL  122 (195)
T ss_pred             eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHH---hhhh
Confidence            348899999888654  789999999999999998875321  1111111110       00000 0011111   1234


Q ss_pred             cC--CCCCeEEEEeCCccchhHHHhcCCe
Q 035566          158 VA--HHFFQRLFFDDSTRNIECGKSIGLH  184 (238)
Q Consensus       158 ~~--~~~~~~v~vgD~~~di~~a~~~G~~  184 (238)
                      ++  .+.+++++|+|++....+=-..|+.
T Consensus       123 l~~~~~~~ntiiVDd~p~~~~~~P~N~i~  151 (195)
T TIGR02245       123 LPEFYSMKNTIMFDDLRRNFLMNPQNGLK  151 (195)
T ss_pred             cccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence            44  4779999999998774443334443

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.01  E-value=0.0025  Score=52.42  Aligned_cols=84  Identities=20%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             ChhHHHHHhcCCCCeE---EEecCChHHHHHHHHhcCcccccceeeecc-----cCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           91 DPVLRNLLLSLPIRKV---IFSNADEIHVAKVLRKLGLEDCFDGIVNFE-----SLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        91 ~~~~~~~l~~l~~~~~---i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      +....+++..++.+|+   ++|-+....+..+.+...     +.++.-+     ...+..    +..-+..+|+++|+..
T Consensus       257 fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~----K~eNirkIAkklNlg~  327 (574)
T COG3882         257 FKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDP----KAENIRKIAKKLNLGL  327 (574)
T ss_pred             HHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCc----chhhHHHHHHHhCCCc
Confidence            3445566777777754   667677777777776543     2222222     223332    4777888999999999


Q ss_pred             CeEEEEeCCccchhHHHhcCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~  183 (238)
                      +..+|++|++...+-.+.-+-
T Consensus       328 dSmvFiDD~p~ErE~vk~~~~  348 (574)
T COG3882         328 DSMVFIDDNPAERELVKRELP  348 (574)
T ss_pred             cceEEecCCHHHHHHHHhcCc
Confidence            999999999999888888763

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.92  E-value=0.0012  Score=60.12  Aligned_cols=110  Identities=11%  Similarity=0.129  Sum_probs=70.7

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCC----------------CCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNK----------------TTG  146 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~----------------~~~  146 (238)
                      -+|.+++.+.++.++..   ...+|+.....+..+.+.+|+...-+  .++.+........                .+.
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~  625 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE  625 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence            36788898888888755   46899988899999999999775442  2444443322210                001


Q ss_pred             chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccc
Q 035566          147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYA  200 (238)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v  200 (238)
                      .+..+.+.+++.   .+-+.|.||+.||..|.+.|.+...+...|.+  +..+|.+
T Consensus       626 qK~~IV~~lq~~---g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadiv  678 (917)
T COG0474         626 QKARIVEALQKS---GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIV  678 (917)
T ss_pred             HHHHHHHHHHhC---CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceE
Confidence            111222223333   45689999999999999999987656654543  4555544

>PLN02645 phosphoglycolate phosphatase

Probab=96.77  E-value=0.0078  Score=48.07  Aligned_cols=86  Identities=14%  Similarity=0.075  Sum_probs=57.9

Q ss_pred             CChhHHHHHhcCCC---CeEEEecCCh---HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566           90 PDPVLRNLLLSLPI---RKVIFSNADE---IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF  163 (238)
Q Consensus        90 ~~~~~~~~l~~l~~---~~~i~t~~~~---~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~  163 (238)
                      ++||+.++|+.++.   +.+++||++.   ......++.+|+...++.++++..            .....++..+....
T Consensus        45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~------------~~~~~l~~~~~~~~  112 (311)
T PLN02645         45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF------------AAAAYLKSINFPKD  112 (311)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH------------HHHHHHHhhccCCC
Confidence            34777777776654   4679999873   344455677888766666765432            23344555565444


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEE
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~  187 (238)
                      ..++++++..+...++.+|+..+.
T Consensus       113 ~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        113 KKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             CEEEEEcCHHHHHHHHHCCCEEec
Confidence            568888888889999999997654

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.73  E-value=0.0029  Score=55.50  Aligned_cols=132  Identities=10%  Similarity=0.140  Sum_probs=84.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc----eeeecccCCCCCCC----------------C
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD----GIVNFESLNPTNKT----------------T  145 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~~k~~----------------~  145 (238)
                      +|.+++.+.++.++..   ...+|+........+.+++|+...-+    ..+++.+++...+.                +
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P  663 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP  663 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence            7788898888887655   45899999999999999999765444    23333333322210                0


Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhHHHHHhHHhhhccccccc
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHNIREAFPELWDADEISKN  223 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~el~~~l~~~~~~~~~~~~  223 (238)
                      .++..+.   +.|.-..+=+-|-||+.||-.+.+.+.+...+-.+|..  +..+|.|..+ +++..++..+-+.+++..+
T Consensus       664 ~HK~kIV---eaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~D-DnFstIvaAVEEGr~IynN  739 (972)
T KOG0202|consen  664 QHKLKIV---EALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLAD-DNFSTIVAAVEEGRAIYNN  739 (972)
T ss_pred             hhHHHHH---HHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEec-CcHHHHHHHHHHhHHHHHH
Confidence            1222233   33333345688899999999999999986444435543  6677777643 4455555555555555554


Q ss_pred             c
Q 035566          224 I  224 (238)
Q Consensus       224 ~  224 (238)
                      +
T Consensus       740 i  740 (972)
T KOG0202|consen  740 I  740 (972)
T ss_pred             H
Confidence            4

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.67  E-value=0.013  Score=43.44  Aligned_cols=22  Identities=9%  Similarity=0.018  Sum_probs=18.0

Q ss_pred             eEEEEeCCccchhHHHhcCCeE
Q 035566          164 QRLFFDDSTRNIECGKSIGLHT  185 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~  185 (238)
                      -++.+||++||+.+..-....+
T Consensus       211 ~t~~~GDg~nD~Pl~ev~d~Af  232 (274)
T COG3769         211 TTLGLGDGPNDAPLLEVMDYAF  232 (274)
T ss_pred             EEEecCCCCCcccHHHhhhhhe
Confidence            4889999999999988776533

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.66  E-value=0.0082  Score=55.51  Aligned_cols=120  Identities=11%  Similarity=0.100  Sum_probs=73.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc------------------------eeeecccCCCC
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD------------------------GIVNFESLNPT  141 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~------------------------~i~~~~~~~~~  141 (238)
                      ++.+++.+.++.++..   ..++|+.....+..+.+.+|+..--.                        .++++.+....
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l  647 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM  647 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence            4578888888888755   46899988888999999988742100                        12222221111


Q ss_pred             C------------------CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc
Q 035566          142 N------------------KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL  201 (238)
Q Consensus       142 k------------------~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~  201 (238)
                      .                  -.+..+..+.+.+++.|   .-+.|+||+.||..|.+.+.+...+-..|.+  +..||+++
T Consensus       648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g---~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL  724 (997)
T TIGR01106       648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL  724 (997)
T ss_pred             CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCC---CEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEE
Confidence            0                  00011222223334443   4688999999999999999985443334443  66789887


Q ss_pred             cC--hhHHHHHh
Q 035566          202 EN--IHNIREAF  211 (238)
Q Consensus       202 ~~--~~el~~~l  211 (238)
                      .+  +.-+.+.+
T Consensus       725 ~dd~f~~Iv~ai  736 (997)
T TIGR01106       725 LDDNFASIVTGV  736 (997)
T ss_pred             ecCCHHHHHHHH
Confidence            76  66666544

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.44  E-value=0.047  Score=45.84  Aligned_cols=33  Identities=12%  Similarity=0.262  Sum_probs=24.2

Q ss_pred             hHHHHHhcCCCCeEEEecCChHHHHHHHHh-cCcc
Q 035566           93 VLRNLLLSLPIRKVIFSNADEIHVAKVLRK-LGLE  126 (238)
Q Consensus        93 ~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~-~~~~  126 (238)
                      ..-+.....+ +.+++|.+++.+++..++. +|.+
T Consensus       100 e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D  133 (498)
T PLN02499        100 EAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD  133 (498)
T ss_pred             HHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence            3444444433 6789999999999999998 7755

>smart00775 LNS2 LNS2 domain

Probab=96.11  E-value=0.0059  Score=43.56  Aligned_cols=20  Identities=10%  Similarity=0.223  Sum_probs=16.5

Q ss_pred             EEEeCCccchhHHHhcCCeE
Q 035566          166 LFFDDSTRNIECGKSIGLHT  185 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~  185 (238)
                      ..|||+.+|+.+=+.+|++.
T Consensus       123 ~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775      123 AGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             EEeCCCchhHHHHHHcCCCh
Confidence            35888899999999999853

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.95  E-value=0.039  Score=49.17  Aligned_cols=107  Identities=14%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CChhHHHH---HhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566           90 PDPVLRNL---LLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL  166 (238)
Q Consensus        90 ~~~~~~~~---l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v  166 (238)
                      +.|++...   |+++..+.+++|+......+.+.+++|    ++.++..- ....     +...+.    ++.-....+.
T Consensus       724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev-~P~~-----K~~~Ik----~lq~~~~~Va  789 (951)
T KOG0207|consen  724 VRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV-LPEQ-----KAEKIK----EIQKNGGPVA  789 (951)
T ss_pred             cchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc-Cchh-----hHHHHH----HHHhcCCcEE
Confidence            34555554   455556678999999999999999999    44444322 1111     122232    2322336689


Q ss_pred             EEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566          167 FFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF  211 (238)
Q Consensus       167 ~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l  211 (238)
                      ||||+.||-.+...+.+. +.++.+.  ....+|.++-  ++.++...+
T Consensus       790 MVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmrn~L~~v~~ai  837 (951)
T KOG0207|consen  790 MVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMRNDLRDVPFAI  837 (951)
T ss_pred             EEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEccchhhhHHHH
Confidence            999999998887777663 4444443  3556776543  444444433

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=95.91  E-value=0.0043  Score=42.32  Aligned_cols=14  Identities=29%  Similarity=0.496  Sum_probs=12.8

Q ss_pred             eEEEEecCCceeeC
Q 035566            5 ECLLFDVDDTLYSH   18 (238)
Q Consensus         5 k~vifD~DGTL~~~   18 (238)
                      |+|+||+||||+..
T Consensus         2 K~i~~DiDGTL~~~   15 (126)
T TIGR01689         2 KRLVMDLDNTITLT   15 (126)
T ss_pred             CEEEEeCCCCcccC
Confidence            79999999999874

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=95.88  E-value=0.065  Score=40.50  Aligned_cols=81  Identities=9%  Similarity=0.039  Sum_probs=58.0

Q ss_pred             eEEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          105 KVIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       105 ~~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      .+++|++.--......=.++++.+|.  .++++...+       +..-+..+.+++|-+...-++|||+...=.+|+..+
T Consensus       178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG-------K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~  250 (274)
T TIGR01658       178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG-------KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMN  250 (274)
T ss_pred             EEEEEcCccHHHHHHHHHhccCCccccccccchhhcc-------hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcC
Confidence            36888875544444444567877774  455544332       244455568899987789999999999999999999


Q ss_pred             CeEEEecCCC
Q 035566          183 LHTVLVGTSR  192 (238)
Q Consensus       183 ~~~i~v~~~~  192 (238)
                      |+++-++...
T Consensus       251 wPFw~I~~h~  260 (274)
T TIGR01658       251 WPFVKIDLHP  260 (274)
T ss_pred             CCeEEeecCC
Confidence            9999887654

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=95.77  E-value=0.018  Score=53.68  Aligned_cols=49  Identities=10%  Similarity=0.146  Sum_probs=38.4

Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF  211 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l  211 (238)
                      .+-+.++||+.||+.|.+.|.+. |++...+   ....+|+++.++..|.+++
T Consensus       768 ~~~vl~iGDG~ND~~mlk~AdVG-Igi~g~eg~qA~~aaD~~i~~F~~L~~ll  819 (1057)
T TIGR01652       768 GKTTLAIGDGANDVSMIQEADVG-VGISGKEGMQAVMASDFAIGQFRFLTKLL  819 (1057)
T ss_pred             CCeEEEEeCCCccHHHHhhcCee-eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence            35799999999999999999874 4553322   3567999999988887765

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=95.13  E-value=0.061  Score=41.71  Aligned_cols=69  Identities=14%  Similarity=0.154  Sum_probs=40.3

Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC---CeEEEecCCCCCccccccccChhHHHHHhHHhhhcc
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG---LHTVLVGTSRRTKGADYALENIHNIREAFPELWDAD  218 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G---~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~  218 (238)
                      ...+..+.++...+..-.++.||...|=.+...+.   -.++-+..+  ..++++...........+..+....
T Consensus       184 G~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~--~t~a~~~~~~~~~~~~~l~~~~~~~  255 (266)
T COG1877         184 GAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG--STQAKFRLAGVYGFLRSLYKLLEAL  255 (266)
T ss_pred             HHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC--cccccccccccHHHHHHHHHHHHHh
Confidence            44444457777766566899999999977777765   445555444  3444444444444444444444443

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=95.09  E-value=0.11  Score=36.90  Aligned_cols=19  Identities=16%  Similarity=0.331  Sum_probs=16.3

Q ss_pred             EEEeCCccchhHHHhcCCe
Q 035566          166 LFFDDSTRNIECGKSIGLH  184 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~  184 (238)
                      ..||.+.+|+.+=+++|++
T Consensus       123 agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  123 AGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             EecCCcHHHHHHHHHcCCC
Confidence            3489999999999999984

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=94.99  E-value=0.11  Score=44.60  Aligned_cols=94  Identities=12%  Similarity=0.176  Sum_probs=62.1

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.+++.+.++.++.   +..++|+........+.+.+|+       +     ....|    ... .++.+.+.-....+
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-----~~~~p----~~K-~~~v~~l~~~g~~v  409 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-----ARVTP----EEK-AALVEALQKKGRVV  409 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-----eccCH----HHH-HHHHHHHHHCCCEE
Confidence            556778777777754   3568999998899999999886       1     11111    211 12223222223679


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCCCccccccccC
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALEN  203 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~  203 (238)
                      .|+||+.||..+.+.+++. +.++   ....+|.++.+
T Consensus       410 ~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~  443 (499)
T TIGR01494       410 AMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLD  443 (499)
T ss_pred             EEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEec
Confidence            9999999999999999865 4443   35567877765

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=94.69  E-value=0.27  Score=46.13  Aligned_cols=38  Identities=16%  Similarity=0.312  Sum_probs=31.0

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE  126 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~  126 (238)
                      ++.|++.+.++.++..   ..++|+.....+..+.+..|+-
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            4678888888888655   4689998889999999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=94.58  E-value=0.043  Score=43.56  Aligned_cols=99  Identities=20%  Similarity=0.180  Sum_probs=63.3

Q ss_pred             ChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhc---CcccccceeeecccCC-----CCCCCC--------------
Q 035566           91 DPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFESLN-----PTNKTT--------------  145 (238)
Q Consensus        91 ~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~-----~~k~~~--------------  145 (238)
                      .|....+|+.|+   ++.+++||++...+..-++.+   .+.++||.++.-....     ..+|-.              
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv  321 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV  321 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence            355666666664   447899999988887666654   4557888876433211     111100              


Q ss_pred             --------CchHHHHHHHHhcCCCCCeEEEEeCCc-cchhHHH-hcCCeEEEec
Q 035566          146 --------GQELQLISMLRMVAHHFFQRLFFDDST-RNIECGK-SIGLHTVLVG  189 (238)
Q Consensus       146 --------~~~~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~-~~G~~~i~v~  189 (238)
                              =....++++++.-|....++++|||++ .|+.-.. +.||.+-++-
T Consensus       322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII  375 (510)
T KOG2470|consen  322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII  375 (510)
T ss_pred             hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence                    012234555677788888999999995 6666555 8999887663

>PLN02151 trehalose-phosphatase

Probab=94.40  E-value=0.16  Score=41.16  Aligned_cols=70  Identities=19%  Similarity=0.274  Sum_probs=52.3

Q ss_pred             CchHHHHHHHHhcCCCCC---eEEEEeCCccchhHHHhc-----CCeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566          146 GQELQLISMLRMVAHHFF---QRLFFDDSTRNIECGKSI-----GLHTVLVGTSRRTKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~---~~v~vgD~~~di~~a~~~-----G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      .+...+..+++.+++...   -.+|+||-..|-.+.+.+     |+ .|.|+.+.....|+|.+++.+|+.++|..+..
T Consensus       269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~  346 (354)
T PLN02151        269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE  346 (354)
T ss_pred             CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence            456777777888876533   279999999997777654     43 46666545567899999999999999877654

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=94.37  E-value=0.049  Score=37.34  Aligned_cols=99  Identities=19%  Similarity=0.169  Sum_probs=55.8

Q ss_pred             CCCCChhHHHHHhcCCC--CeEEEecC--ChHHHHHHHHhcCcccccce-----eeecccCCCCCCCCCchHHHHHHHHh
Q 035566           87 NLKPDPVLRNLLLSLPI--RKVIFSNA--DEIHVAKVLRKLGLEDCFDG-----IVNFESLNPTNKTTGQELQLISMLRM  157 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~--~~~i~t~~--~~~~~~~~l~~~~~~~~f~~-----i~~~~~~~~~k~~~~~~~~~~~~~~~  157 (238)
                      .+...|++.+.++.|-.  ..+|+|..  .........+++  .++|..     ++.|..                    
T Consensus        66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl--~E~FPFi~~qn~vfCgn--------------------  123 (180)
T COG4502          66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWL--KEKFPFISYQNIVFCGN--------------------  123 (180)
T ss_pred             hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHH--HHHCCCCChhhEEEecC--------------------
Confidence            45667888888888854  46777765  334444444442  222322     222221                    


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCC-ccccccccChhHHHHHh
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRT-KGADYALENIHNIREAF  211 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~-~~ad~v~~~~~el~~~l  211 (238)
                      -|+- +-=++|+|++.+++...  |.+ |++...... ..-=..+.++.|+.+.+
T Consensus       124 Kniv-kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nenRF~Rv~~W~e~eq~l  174 (180)
T COG4502         124 KNIV-KADILIDDNPLNLENFK--GNK-ILFDAHHNKNENRFVRVRDWYEAEQAL  174 (180)
T ss_pred             CCeE-EeeEEecCCchhhhhcc--Cce-EEEecccccCccceeeeccHHHHHHHH
Confidence            1211 12378999999998776  433 555444432 22334578899888654

>PLN03190 aminophospholipid translocase; Provisional

Probab=94.15  E-value=0.088  Score=49.57  Aligned_cols=48  Identities=10%  Similarity=0.135  Sum_probs=38.8

Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF  211 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l  211 (238)
                      .-++++||+.||+.|.+.|.+. |++...+   ....+|+.+..+..|.++|
T Consensus       872 ~vtlaIGDGaNDv~mIq~AdVG-IGIsG~EG~qA~~aSDfaI~~Fr~L~rLL  922 (1178)
T PLN03190        872 DMTLAIGDGANDVSMIQMADVG-VGISGQEGRQAVMASDFAMGQFRFLVPLL  922 (1178)
T ss_pred             cEEEEECCCcchHHHHHhcCee-eeecCchhHHHHHhhccchhhhHHHHHHH
Confidence            4689999999999999999874 4554333   3667899999999998876

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=93.69  E-value=0.58  Score=35.82  Aligned_cols=106  Identities=13%  Similarity=0.212  Sum_probs=55.2

Q ss_pred             CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccccee--ee----ccc--
Q 035566           69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGI--VN----FES--  137 (238)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i--~~----~~~--  137 (238)
                      .+......+.+..    ..+...+|+.++++.|..   +..|+|.+-...+..++++.+..  ++.+  ++    .++  
T Consensus        74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g  147 (246)
T PF05822_consen   74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDG  147 (246)
T ss_dssp             T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTS
T ss_pred             CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcc
Confidence            3344445554443    346777888888877754   46799999999999999987543  2221  11    000  


Q ss_pred             --CCCCCCCC---CchHHHHH---HHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566          138 --LNPTNKTT---GQELQLIS---MLRMVAHHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       138 --~~~~k~~~---~~~~~~~~---~~~~~~~~~~~~v~vgD~~~di~~a~~~  181 (238)
                        .+...|..   .+......   ..+.+. ...+++..||+.-|+.|+..+
T Consensus       148 ~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  148 VLVGFKGPLIHTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             BEEEE-SS---TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred             eEeecCCCceEEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence              00111100   11222221   112222 347899999999999999877

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=93.16  E-value=0.33  Score=40.23  Aligned_cols=95  Identities=14%  Similarity=0.100  Sum_probs=67.8

Q ss_pred             CChhHHHHHhcCC---CCeEEEecC--ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           90 PDPVLRNLLLSLP---IRKVIFSNA--DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        90 ~~~~~~~~l~~l~---~~~~i~t~~--~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      |.....++.+...   .+.+++|+-  +...++..+...|.+.+--.++.+.+....|    +...++.+ ++.-+++|.
T Consensus       100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~K----nSg~LFk~Vlk~EnVd~~  175 (635)
T COG5610         100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKK----NSGNLFKAVLKLENVDPK  175 (635)
T ss_pred             ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhc----ccchHHHHHHhhcCCChh
Confidence            3344455555543   345677774  6677788888888775444466666666555    47778887 677789999


Q ss_pred             eEEEEeCCc-cchhHHHhcCCeEEEe
Q 035566          164 QRLFFDDST-RNIECGKSIGLHTVLV  188 (238)
Q Consensus       164 ~~v~vgD~~-~di~~a~~~G~~~i~v  188 (238)
                      .++.+||.. .|..++++.|+.+...
T Consensus       176 ~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         176 KWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             heEEecCchhhhhcCccccchhHHHH
Confidence            999999985 6699999999977643

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=93.15  E-value=0.53  Score=36.16  Aligned_cols=72  Identities=19%  Similarity=0.275  Sum_probs=44.4

Q ss_pred             CCeEEEecCChHHHH---HHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHH
Q 035566          103 IRKVIFSNADEIHVA---KVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGK  179 (238)
Q Consensus       103 ~~~~i~t~~~~~~~~---~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~  179 (238)
                      .+.+++|....+.-.   ..|+.+|+.  +|..+.-...        ++..+   ++.++-  .  +||+|....++.|.
T Consensus       187 iRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~--------~K~~v---L~~~~p--h--IFFDDQ~~H~~~a~  249 (264)
T PF06189_consen  187 IRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL--------PKGPV---LKAFRP--H--IFFDDQDGHLESAS  249 (264)
T ss_pred             eEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC--------chhHH---HHhhCC--C--EeecCchhhhhHhh
Confidence            346788886554334   445555655  5543322211        13333   344433  3  99999999999999


Q ss_pred             hcCCeEEEecCCC
Q 035566          180 SIGLHTVLVGTSR  192 (238)
Q Consensus       180 ~~G~~~i~v~~~~  192 (238)
                       .+++++.|..+.
T Consensus       250 -~~vps~hVP~gv  261 (264)
T PF06189_consen  250 -KVVPSGHVPYGV  261 (264)
T ss_pred             -cCCCEEeccCCc
Confidence             778888887764

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=91.96  E-value=0.92  Score=35.66  Aligned_cols=83  Identities=14%  Similarity=0.107  Sum_probs=48.7

Q ss_pred             ChhHHHHHhcCCC---CeEEEecCC---hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           91 DPVLRNLLLSLPI---RKVIFSNAD---EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        91 ~~~~~~~l~~l~~---~~~i~t~~~---~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      +|++.++|+.++.   +.+++||+.   .......++.+|+....+.++++            ......++++......+
T Consensus        20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts------------~~~~~~~l~~~~~~~~~   87 (279)
T TIGR01452        20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS------------ALCAARLLRQPPDAPKA   87 (279)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH------------HHHHHHHHHhhCcCCCE
Confidence            4566677766654   357899864   33444567778876444444432            22233444554444577


Q ss_pred             EEEEeCCccchhHHHhcCCeEE
Q 035566          165 RLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      ++++|+. .-...++..|+..+
T Consensus        88 v~~iG~~-~~~~~l~~~g~~~~  108 (279)
T TIGR01452        88 VYVIGEE-GLRAELDAAGIRLA  108 (279)
T ss_pred             EEEEcCH-HHHHHHHHCCCEEe
Confidence            9999975 23556677787644

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR00685 T6PP trehalose-phosphatase

Probab=91.70  E-value=0.21  Score=38.36  Aligned_cols=16  Identities=31%  Similarity=0.490  Sum_probs=13.6

Q ss_pred             ceeEEEEecCCceeeC
Q 035566            3 KYECLLFDVDDTLYSH   18 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~   18 (238)
                      +..+++||+||||++.
T Consensus         2 ~~~~l~lD~DGTL~~~   17 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEI   17 (244)
T ss_pred             CcEEEEEecCccccCC
Confidence            4578999999999984

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=91.64  E-value=1.2  Score=34.77  Aligned_cols=51  Identities=22%  Similarity=0.162  Sum_probs=34.6

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHh-cCcccccceeeecc
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRK-LGLEDCFDGIVNFE  136 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~-~~~~~~f~~i~~~~  136 (238)
                      ....++||+.++|+.|+.+   .+++||++...   ....++. .+.+...+.++++.
T Consensus        21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~   78 (269)
T COG0647          21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG   78 (269)
T ss_pred             eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence            4467889999999988654   57899986543   3344444 55655666777655

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=90.29  E-value=0.65  Score=39.31  Aligned_cols=88  Identities=14%  Similarity=0.203  Sum_probs=60.5

Q ss_pred             CChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566           90 PDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL  166 (238)
Q Consensus        90 ~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v  166 (238)
                      ..||++|-+.+++.   +.+.+|+.++-....+.+..|+++|.-.         .+|    ...+ ..+++..-..+=+-
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe---------atP----EdK~-~~I~~eQ~~grlVA  513 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE---------ATP----EDKL-ALIRQEQAEGRLVA  513 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc---------CCh----HHHH-HHHHHHHhcCcEEE
Confidence            34888887777654   4578999888888889999998765321         222    3333 33344444456688


Q ss_pred             EEeCCccchhHHHhcCCeEEEecCCC
Q 035566          167 FFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       167 ~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      |.||+.||-.+...+... +.+|+|-
T Consensus       514 MtGDGTNDAPALAqAdVg-~AMNsGT  538 (681)
T COG2216         514 MTGDGTNDAPALAQADVG-VAMNSGT  538 (681)
T ss_pred             EcCCCCCcchhhhhcchh-hhhcccc
Confidence            999999999999999874 5555554

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=90.18  E-value=0.34  Score=35.57  Aligned_cols=28  Identities=25%  Similarity=0.292  Sum_probs=22.9

Q ss_pred             eEEEEecCCceeeCccchhhHHHHHHHH
Q 035566            5 ECLLFDVDDTLYSHSYGFSNKCSKNIEE   32 (238)
Q Consensus         5 k~vifD~DGTL~~~~~~~~~~~~~~~~~   32 (238)
                      -+++||+||||......+.+.+.+.+..
T Consensus        12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~   39 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK   39 (252)
T ss_pred             eEEEEecCCccccccccCCHHHHHHHHH
Confidence            3899999999999888888887765544

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=89.10  E-value=1.1  Score=40.31  Aligned_cols=119  Identities=9%  Similarity=0.039  Sum_probs=69.8

Q ss_pred             CCChhHHHHHhcCCCCeE---EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHH----------
Q 035566           89 KPDPVLRNLLLSLPIRKV---IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISML----------  155 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~~~---i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~----------  155 (238)
                      +..||+++.++.++..++   -+|+.+-...+.+....|+-..=+.....+...+.+-   .+.+..++.          
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~---s~ee~~~i~pkl~VlARSS  723 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFREL---SQEERDKIWPKLRVLARSS  723 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhc---CHHHHHhhhhhheeeecCC
Confidence            447999999998887754   7888888888888888876533221111111111110   122222222          


Q ss_pred             --------HhcCCCCCeEE-EEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566          156 --------RMVAHHFFQRL-FFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF  211 (238)
Q Consensus       156 --------~~~~~~~~~~v-~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l  211 (238)
                              +.+- ...++| +-||+.||-.+.+.+.+...+--.|-  .++.+|.++-  +|.-+...+
T Consensus       724 P~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v  791 (1034)
T KOG0204|consen  724 PNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAV  791 (1034)
T ss_pred             CchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHH
Confidence                    1111 223344 46899999999999998766544443  3777887764  355554443

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=88.39  E-value=7.9  Score=29.88  Aligned_cols=122  Identities=11%  Similarity=0.035  Sum_probs=59.3

Q ss_pred             hhHHHHHhcCC---CCeEEEecC---ChHHHHHHHHhcCcccccceeeecccC-----CCCCCCC----CchHHHHHHHH
Q 035566           92 PVLRNLLLSLP---IRKVIFSNA---DEIHVAKVLRKLGLEDCFDGIVNFESL-----NPTNKTT----GQELQLISMLR  156 (238)
Q Consensus        92 ~~~~~~l~~l~---~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~i~~~~~~-----~~~k~~~----~~~~~~~~~~~  156 (238)
                      |++.++|+.++   .+.+++||+   ........++.+|+....+.++++...     ...++..    --...+.+.++
T Consensus        20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~~l~   99 (249)
T TIGR01457        20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKEAIK   99 (249)
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHHHHH
Confidence            44556665554   445788873   456666778888887666666655321     0000000    01133555566


Q ss_pred             hcCCC----CCeEEEEeC-Cccch---hH-HH--hcCCeEEEecCCCCCccccccccChhHHHHHhHH
Q 035566          157 MVAHH----FFQRLFFDD-STRNI---EC-GK--SIGLHTVLVGTSRRTKGADYALENIHNIREAFPE  213 (238)
Q Consensus       157 ~~~~~----~~~~v~vgD-~~~di---~~-a~--~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~  213 (238)
                      ..|+.    ..+.|++|. ...+.   .. ..  ..|...+..|.+...+..+-.+....-+...+..
T Consensus       100 ~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~  167 (249)
T TIGR01457       100 EAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEV  167 (249)
T ss_pred             HcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHH
Confidence            66642    235666764 33332   21 11  3477755555444333233233444444444443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=87.50  E-value=1.6  Score=38.54  Aligned_cols=60  Identities=8%  Similarity=0.147  Sum_probs=40.6

Q ss_pred             HHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566          149 LQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF  211 (238)
Q Consensus       149 ~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l  211 (238)
                      ..+-+.+++.  ...++..|||+-||+.|.+.+.+. |++...+   ..-.||+-+..+..+.+++
T Consensus       770 A~v~~llq~~--t~krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLL  832 (1051)
T KOG0210|consen  770 AQVVRLLQKK--TGKRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLL  832 (1051)
T ss_pred             HHHHHHHHHh--hCceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHh
Confidence            3344444443  337899999999999999988763 4442222   2446898888888888765

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=87.32  E-value=4.1  Score=33.21  Aligned_cols=78  Identities=12%  Similarity=0.155  Sum_probs=53.1

Q ss_pred             EEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCC
Q 035566          106 VIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       106 ~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~  183 (238)
                      +++|+.........+=.+|+...|.  .|++....+       +..-+..+..++|- ....++|||+...-.+|++..|
T Consensus       374 VlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG-------KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~  445 (468)
T KOG3107|consen  374 VLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG-------KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM  445 (468)
T ss_pred             EEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc-------HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence            5777765444434444457766663  455544333       24445556888986 5678889999888999999999


Q ss_pred             eEEEecCC
Q 035566          184 HTVLVGTS  191 (238)
Q Consensus       184 ~~i~v~~~  191 (238)
                      +++-++..
T Consensus       446 PfwrI~~h  453 (468)
T KOG3107|consen  446 PFWRISSH  453 (468)
T ss_pred             ceEeeccC
Confidence            99887654

>smart00775 LNS2 LNS2 domain

Probab=86.83  E-value=3.8  Score=29.14  Aligned_cols=13  Identities=23%  Similarity=0.427  Sum_probs=11.6

Q ss_pred             EEEEecCCceeeC
Q 035566            6 CLLFDVDDTLYSH   18 (238)
Q Consensus         6 ~vifD~DGTL~~~   18 (238)
                      +|++|+||||+++
T Consensus         1 iVisDIDGTL~~s   13 (157)
T smart00775        1 IVISDIDGTITKS   13 (157)
T ss_pred             CEEEecCCCCccc
Confidence            4899999999995

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PLN02151 trehalose-phosphatase

Probab=86.83  E-value=0.65  Score=37.71  Aligned_cols=28  Identities=21%  Similarity=0.271  Sum_probs=18.7

Q ss_pred             eEEEEecCCceee----Ccc-chhhHHHHHHHH
Q 035566            5 ECLLFDVDDTLYS----HSY-GFSNKCSKNIEE   32 (238)
Q Consensus         5 k~vifD~DGTL~~----~~~-~~~~~~~~~~~~   32 (238)
                      .++++|+||||.+    ... .+......++.+
T Consensus        99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~  131 (354)
T PLN02151         99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK  131 (354)
T ss_pred             eEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence            5889999999994    233 345555555554

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=84.41  E-value=0.62  Score=38.46  Aligned_cols=16  Identities=19%  Similarity=0.324  Sum_probs=14.1

Q ss_pred             ceeEEEEecCCceeeC
Q 035566            3 KYECLLFDVDDTLYSH   18 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~   18 (238)
                      +.++|++|+||||+.+
T Consensus       374 n~kiVVsDiDGTITkS  389 (580)
T COG5083         374 NKKIVVSDIDGTITKS  389 (580)
T ss_pred             CCcEEEEecCCcEEeh
Confidence            3689999999999995

>PLN02580 trehalose-phosphatase

Probab=82.20  E-value=0.73  Score=37.88  Aligned_cols=15  Identities=33%  Similarity=0.332  Sum_probs=12.3

Q ss_pred             eeEEEEecCCceeeC
Q 035566            4 YECLLFDVDDTLYSH   18 (238)
Q Consensus         4 ~k~vifD~DGTL~~~   18 (238)
                      -.+++||+||||.+-
T Consensus       119 ~~~LfLDyDGTLaPI  133 (384)
T PLN02580        119 KIALFLDYDGTLSPI  133 (384)
T ss_pred             CeEEEEecCCccCCC
Confidence            358899999999873

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=81.73  E-value=1.1  Score=31.41  Aligned_cols=16  Identities=31%  Similarity=0.559  Sum_probs=13.7

Q ss_pred             eeEEEEecCCceeeCc
Q 035566            4 YECLLFDVDDTLYSHS   19 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~   19 (238)
                      .+.+++|+||||+.+.
T Consensus         2 k~~lvldld~tl~~~~   17 (148)
T smart00577        2 KKTLVLDLDETLVHST   17 (148)
T ss_pred             CcEEEEeCCCCeECCC
Confidence            4679999999999964

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=81.26  E-value=5.8  Score=37.20  Aligned_cols=65  Identities=17%  Similarity=0.132  Sum_probs=43.4

Q ss_pred             HHHHHHHHhcCcccccceeeecc--cCCCCCCCCCchHHHHHHHHhcCCCCCeE-EEEeCCcc-chhHHHh
Q 035566          114 IHVAKVLRKLGLEDCFDGIVNFE--SLNPTNKTTGQELQLISMLRMVAHHFFQR-LFFDDSTR-NIECGKS  180 (238)
Q Consensus       114 ~~~~~~l~~~~~~~~f~~i~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-v~vgD~~~-di~~a~~  180 (238)
                      ..+...|+..++.  ...+++..  .....+....+..++..+..++|++.+++ |++||+-| |++....
T Consensus       924 ~elr~~Lr~~gLr--~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~  992 (1050)
T TIGR02468       924 KELRKLLRIQGLR--CHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLG  992 (1050)
T ss_pred             HHHHHHHHhCCCc--eEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhC
Confidence            5666777776765  34444443  24444444445666666689999999999 55999999 9776643

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK10444 UMP phosphatase; Provisional

Probab=80.09  E-value=11  Score=29.07  Aligned_cols=102  Identities=12%  Similarity=0.013  Sum_probs=49.7

Q ss_pred             ChhHHHHHhcCCC---CeEEEecCChHH---HHHHHHhcCcccccceeeecccC-----CC--CC-CCCCchHHHHHHHH
Q 035566           91 DPVLRNLLLSLPI---RKVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESL-----NP--TN-KTTGQELQLISMLR  156 (238)
Q Consensus        91 ~~~~~~~l~~l~~---~~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~-----~~--~k-~~~~~~~~~~~~~~  156 (238)
                      +|++.++++.|+.   +.+++||+....   ....++.+|+.---+.++++...     ..  .+ .-.--...+.+.++
T Consensus        19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~l~   98 (248)
T PRK10444         19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHELY   98 (248)
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHHHH
Confidence            4666677666653   357889876543   34445566765333445444210     00  00 00001244555555


Q ss_pred             hcCCC----CCeEEEEeCCcc-chhHHH------hcCCeEEEecCCC
Q 035566          157 MVAHH----FFQRLFFDDSTR-NIECGK------SIGLHTVLVGTSR  192 (238)
Q Consensus       157 ~~~~~----~~~~v~vgD~~~-di~~a~------~~G~~~i~v~~~~  192 (238)
                      ..|+.    ..+.|++|...+ +.....      ..|...+..+.+.
T Consensus        99 ~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D~  145 (248)
T PRK10444         99 KAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT  145 (248)
T ss_pred             HCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            55543    235777886543 222211      2377666655443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	238
3nuq_A	282	Structure Of A Putative Nucleotide Phosphatase From		1e-12
3onn_A	263	Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc		1e-12
3opx_A	263	Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt		9e-12

>pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   FD+D+ LY  S    +   ++I  +    L +   +    N   YK YG ++ GL 
Sbjct: 58  KVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL- 116
Query: 65  AVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL----PIRKV-IFSNADEIHVAK 118
            + +  +  +Y+  V   LP ++ LKPD  LRN+LL L     I K+ +F+NA + H  +
Sbjct: 117 VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIR 176
Query: 119 VLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS 171
            LR LG+ D FDG+   +          P  K   + ++   + R     +    F DDS
Sbjct: 177 CLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR-----YENAYFIDDS 231
Query: 172 TRNIECGKSIGLHTVL 187
            +NIE G  +G+ T +
Sbjct: 232 GKNIETGIKLGMKTCI 247

>pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   FD+D+ LY  S    +   ++I  +    L +   +    N   YK YG ++ GL 
Sbjct: 31  KVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL- 89
Query: 65  AVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL----PIRKV-IFSNADEIHVAK 118
            + +  +  +Y+  V   LP ++ LKPD  LRN+LL L     I K+ +F+NA + H  +
Sbjct: 90  VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIR 149
Query: 119 VLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS 171
            LR LG+ D FDG+   +          P  K   + ++   + R     +    F DDS
Sbjct: 150 CLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR-----YENAYFIDDS 204
Query: 172 TRNIECGKSIGLHTVL 187
            +NIE G  +G+ T +
Sbjct: 205 GKNIETGIKLGMKTCI 220

>pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 5   ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK 64
           +   F +D+ LY  S    +   ++I  +    L +   +    N   YK YG ++ GL 
Sbjct: 31  KVFFFAIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL- 89
Query: 65  AVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSL----PIRKV-IFSNADEIHVAK 118
            + +  +  +Y+  V   LP ++ LKPD  LRN+LL L     I K+ +F+NA + H  +
Sbjct: 90  VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIR 149
Query: 119 VLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS 171
            LR LG+ D FDG+   +          P  K   + ++   + R     +    F DDS
Sbjct: 150 CLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR-----YENAYFIDDS 204
Query: 172 TRNIECGKSIGLHTVL 187
            +NIE G  +G+ T +
Sbjct: 205 GKNIETGIKLGMKTCI 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	238
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	8e-38
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	8e-09
2zg6_A	220	Putative uncharacterized protein ST2620, probable	1e-08
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	5e-08
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	9e-08
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	9e-08
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	1e-07
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	5e-07
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	8e-07
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	1e-06
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	2e-06
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-05
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	2e-05
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	3e-05
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	5e-05
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	8e-05
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	1e-04
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	6e-04
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	7e-04
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	7e-04
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	8e-04

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score =  132 bits (333), Expect = 8e-38
 Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 16/230 (6%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
               +   FD+D+ LY  S    +   ++I  +    L +   +    N   YK YG ++
Sbjct: 54  NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAI 113

Query: 61  AGLKAVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSLP-----IRKVIFSNADEI 114
            G   + +  +  +Y+  V   LP ++ LKPD  LRN+LL L       +  +F+NA + 
Sbjct: 114 RG-LVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN 172

Query: 115 HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR--LFFDDST 172
           H  + LR LG+ D FDG+   +            ++        +         F DDS 
Sbjct: 173 HAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSG 232

Query: 173 RNIECGKSIGLHTVLVGTSR-------RTKGADYALENIHNIREAFPELW 215
           +NIE G  +G+ T +            +T      + +I  +     +L+
Sbjct: 233 KNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 56.6 bits (136), Expect = 8e-10
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 32/237 (13%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEF----NRVLYKNYGT 58
             + + FD DDTL+  S  +      + E  +   L + +S + +      R   K +G 
Sbjct: 12  AIQLVGFDGDDTLW-KSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGY 70

Query: 59  SMAGLKAVGYDFDNDDYHSFVHGRLPYE-----------NLKPDPVLRNLLLSLP--IRK 105
              G+     +   +   + +  R                ++    +R  + ++      
Sbjct: 71  GAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADYAV 130

Query: 106 VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165
           V+ +  D  H  + + + GL D F  I      +P             +L        + 
Sbjct: 131 VLITKGDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQT--------YARVLSEFDLPAERF 182

Query: 166 LFFDDS-TRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEIS 221
           +   +S   ++E   +IG   +            +A E  H +    P L +  + S
Sbjct: 183 VMIGNSLRSDVEPVLAIGGWGIYTPY-----AVTWAHEQDHGVAADEPRLREVPDPS 234

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 2e-09
 Identities = 44/258 (17%), Positives = 76/258 (29%), Gaps = 64/258 (24%)

Query: 9   FDVDDTLYSHSYGFSNKCSKNI------EEYMIQKLGI----EESEVSEF-NRVLYKNYG 57
           FD  D         S +   +I          ++        +E  V +F   VL  NY 
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 58  TSMAGLKAVGYDFDNDDYHSFVHGRLPYEN----LKPDPV--------LRNLLLSL-PIR 104
             M+ +K       +     ++  R    N         V        LR  LL L P +
Sbjct: 93  FLMSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151

Query: 105 KVIFSNADEIH----------VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM 154
            V+      I              V     ++   D  + + +L   N        L  +
Sbjct: 152 NVL------IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Query: 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYA-----LENIHNIRE 209
           L  +  ++  R    D + NI+    + +H++     R  K   Y      L N+     
Sbjct: 206 LYQIDPNWTSRS---DHSSNIK----LRIHSIQAELRRLLKSKPYENCLLVLLNV----- 253

Query: 210 AFPELWDADEISK-NIKC 226
                 +A   +  N+ C
Sbjct: 254 -----QNAKAWNAFNLSC 266

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 53.5 bits (129), Expect = 8e-09
 Identities = 33/155 (21%), Positives = 47/155 (30%), Gaps = 25/155 (16%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV-----SEFNRVLYKN 55
           M +Y  LLFDVDDT+                  + +   I  +          N+ L++ 
Sbjct: 4   MKRYRTLLFDVDDTILDFQ-----AAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRA 58

Query: 56  Y--GTSMAG----------LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLL--LSL 101
           +  G               LK  GY+ D           L  E  +      +L+  L  
Sbjct: 59  FEEGKMTRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQ 117

Query: 102 PIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE 136
                I +N       K LR  GL   F  I   E
Sbjct: 118 QFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSE 152

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 31/243 (12%), Positives = 56/243 (23%), Gaps = 58/243 (23%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY+ +L D  +TL                  +++  G +     +  R   K  G     
Sbjct: 2   KYKAVLVDFGNTLVGF-----KPVFYEKVYQVLKDNGYDLDL-RKVFRAYAKAMGMINYP 55

Query: 63  -------------LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSL---PIRKV 106
                        L  +G               +              L  L     +  
Sbjct: 56  DEDGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLA 115

Query: 107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESL-----NPTNKTTGQELQLISMLRMVAHH 161
           + SNA    V  +L K  L+  FD +     +     NP                     
Sbjct: 116 LVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNP--------------------K 154

Query: 162 FFQR---------LFFDDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAF 211
            F           +   D         K   +  +L+            ++N+    +  
Sbjct: 155 IFGFALAKVGYPAVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKI 214

Query: 212 PEL 214
            E+
Sbjct: 215 EEM 217

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 50.4 bits (121), Expect = 5e-08
 Identities = 27/209 (12%), Positives = 67/209 (32%), Gaps = 50/209 (23%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
             + L +D+   L +   G+  +   ++ +    + G++  + +E +R+           
Sbjct: 3   TIKALFWDIGGVLLT--NGWDREQRADVAQ----RFGLDTDDFTERHRLAAPELELGRMT 56

Query: 63  LKAV--------GYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP--IRKVIFSNAD 112
           L             DF  +D+ + +      E  +P P +  L   L    R    +N  
Sbjct: 57  LAEYLEQVVFYQPRDFTPEDFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEG 111

Query: 113 EIHVAKVLRKLGLEDCFDGIVN-------------FESLNPTNKTTGQELQLISMLRMVA 159
                  +R  GL +                    +                +++ ++  
Sbjct: 112 RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYR-------------LGLTLAQVRP 158

Query: 160 HHFFQRLFFDDSTRNIECGKSIGLHTVLV 188
               + +  DD  +N++  +++G+H V  
Sbjct: 159 E---EAVMVDDRLQNVQAARAVGMHAVQC 184

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 50.5 bits (121), Expect = 9e-08
 Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 14/145 (9%)

Query: 4   YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG- 62
            + + FD+DDTL   S          IE  +   L ++          L K YG++    
Sbjct: 2   VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61

Query: 63  ----LKAVGYDFD----NDDYHSFVHGRLPYENLKPDPVLRNLLLSL---PIRKVIFSNA 111
               L+ +   ++    +    ++ + +  +  L+  P  R +L+ L        I ++ 
Sbjct: 62  FDYLLRRLDLPYNPKWISAGVIAYHNTK--FAYLREVPGARKVLIRLKELGYELGIITDG 119

Query: 112 DEIHVAKVLRKLGLEDCFDGIVNFE 136
           + +   + + +L L+D F+ ++  +
Sbjct: 120 NPVKQWEKILRLELDDFFEHVIISD 144

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 50.6 bits (121), Expect = 9e-08
 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 26/159 (16%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEF-------NRVLY 53
           +++   + FD+D+TL   + G S +    + + +  K   +E             ++  +
Sbjct: 15  LSRVRAVFFDLDNTLIDTA-GASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECF 73

Query: 54  KNYGTSMAG---------LKAVGYDFDNDD-----YHSFVHGRLPYENLKPD--PVLRNL 97
             Y T +           ++      DN       Y  +   RL +  L  D   +L  L
Sbjct: 74  HPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTEL 133

Query: 98  LLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE 136
              + +  ++ +N D     + +     +  FD IV   
Sbjct: 134 RKEVRL--LLLTNGDRQTQREKIEACACQSYFDAIVIGG 170

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 26/148 (17%), Positives = 54/148 (36%), Gaps = 21/148 (14%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG---- 62
           + FD   TL S   G +    K +EE +       ++ + E+ ++  + +          
Sbjct: 5   VFFDSLGTLNSVE-GAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRP 63

Query: 63  ------------LKAVGYDFDNDDYHSFVHGRLPYENLKPD--PVLRNLLLSLPIRKVIF 108
                        +  G+ +  + +   +     Y  L P+   VL++L     +   + 
Sbjct: 64  LRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKGKYHV--GMI 121

Query: 109 SNADEIHVAKVLRKLGLEDCFDGIVNFE 136
           +++D       L  LG++D FD I   E
Sbjct: 122 TDSDTEQAMAFLDALGIKDLFDSITTSE 149

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 49.0 bits (116), Expect = 5e-07
 Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 46/253 (18%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV----SEFNRVLYKNYGT 58
             +  L  +D+     +  +       +EE+   +L + ++ +         +  + Y  
Sbjct: 129 NEQLPLQFLDNVKVGKNNIY-----AALEEFATTELHVSDATLFSLKGALWTLAQEVYQE 183

Query: 59  SMAGLKAVGYDFDNDDYHSFVHGRLPYEN-LKPDPVLRNLLLSLP---IRKVIFSNADEI 114
              G K            +F  G +  E  L+P   ++ LL  L        I +     
Sbjct: 184 WYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243

Query: 115 HVAKVLRKLGLEDCFDG--------IVNFESLNPTNKTTG--------QELQLISMLRMV 158
                   LGL   F+         ++  E++ P  +  G          L   +  +  
Sbjct: 244 ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYE 303

Query: 159 AHHFFQRLFFD--------DSTRNIECGKSIGLHTVLVGTSRRTK---------GADYAL 201
           ++   Q    +        DS  ++   + IG   +   T  + K          ADY +
Sbjct: 304 SYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363

Query: 202 ENIHNIREAFPEL 214
            ++  +R     L
Sbjct: 364 NHLGELRGVLDNL 376

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 46.3 bits (110), Expect = 8e-07
 Identities = 26/134 (19%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 73  DDYHSFVHGRLPYENLKPDPVLRNLLLSL---PIRKVIFSNADEIHVAKVLRKLGLEDCF 129
            DY   + G       +     RNLL +     +  VI SN      A  +R+L      
Sbjct: 7   VDYAGVLDGTD-----EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV 61

Query: 130 DGIVNFESLNPTNKTTGQELQLI----SMLRMVAHHFFQR----LFFDDSTRNIECGKSI 181
           D ++              EL +     +  +  A          +  DDS  N+      
Sbjct: 62  DKVL-----------LSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEA 110

Query: 182 GLHTVLVGTSRRTK 195
           GL  V      R  
Sbjct: 111 GLVGVYYQQFDRAV 124

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 27/162 (16%)

Query: 1   MTK-YECLLFDVDDTLYS----------------HSYGFSNKCSKNIEEYMIQKLGIEES 43
           M +  + + FD DDTL+S                  YG S + S  + +  +  L I   
Sbjct: 4   MKELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGY 63

Query: 44  EVSEFNRVLYKNY-GTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSL- 101
               F   + +     S   + A       D   S +        ++  P ++  L +L 
Sbjct: 64  GAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLK-----MPIELLPGVKETLKTLK 118

Query: 102 ---PIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP 140
                + V+ +  D +     L + GL   FD I        
Sbjct: 119 ETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSDKTE 160

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 33/252 (13%), Positives = 74/252 (29%), Gaps = 58/252 (23%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVS----EFNRVLYKNY 56
           M + + + FDV +TL        N         + +  G+   +V+    E    + K  
Sbjct: 1   MREVKLVTFDVWNTLLDL-----NIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMR 55

Query: 57  GTSM------------AGLKAVGYDFD-----NDDYHSFVHGRLPYENLKPDPVLRNLLL 99
             +             A    +  D +            V   L  E  K    L+  + 
Sbjct: 56  AQASEDPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTK--EALQF-VK 112

Query: 100 SLPIRKVIFSNADEI---HVAKVLRKLGLEDCFDGIVNFESL-----NPTNKTTGQELQL 151
              ++  +  N       +   +L + GL +  D     + +                  
Sbjct: 113 ERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRK----------- 161

Query: 152 ISMLRMVAHHF----FQRLFFDDSTRN-IECGKSIGLHTVLV----GTSRRTKGADYALE 202
             M   V + F     + L   D+     +  + +G+  V +       R+ +   + + 
Sbjct: 162 -EMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP 220

Query: 203 NIHNIREAFPEL 214
           +I N+++    +
Sbjct: 221 SIANLKDVIELI 232

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 22/145 (15%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
                  LFD D+TL       ++    ++  +M+++ G +    S     +++   T +
Sbjct: 8   TPHDIVFLFDCDNTLLD-----NDHVLADLRAHMMREFGAQ---NSARYWEIFETLRTEL 59

Query: 61  AGLKAVG----------YDFDNDDYHSFVHGRLPYENLKPD--PVLRNLLLSLPIRKVIF 108
                +G           D       SF+        + P     LR+L    P   VI 
Sbjct: 60  GYADYLGALQRYRLEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARGPT--VIL 117

Query: 109 SNADEIHVAKVLRKLGLEDCFDGIV 133
           S+ D +   + + + GL D  +G V
Sbjct: 118 SDGDVVFQPRKIARSGLWDEVEGRV 142

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 9/92 (9%)

Query: 98  LLSLPIRKVIFSNADEIHVAK-VLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLR 156
           L SL +     S   EI  A  +L    L   F        + P +K T        + +
Sbjct: 80  LQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV----HREIYPGSKIT----HFERLQQ 131

Query: 157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV 188
                F Q +FFDD  RNI     +G+  + +
Sbjct: 132 KTGIPFSQMIFFDDERRNIVDVSKLGVTCIHI 163

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 37/166 (22%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVS---------EFNRV 51
             KY+ L FD+DDT+++      ++ +++  E + QK   +    S           N  
Sbjct: 2   SLKYKNLFFDLDDTIWAF-----SRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTE 56

Query: 52  LYKNYGTS------------MAGLKAVGYDFD------NDDY-HSFVHGRLPYENLKPDP 92
           L+  YG                 L+AVG + +      ++D+            + K   
Sbjct: 57  LWLEYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAK--E 114

Query: 93  VLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL 138
           VL    L+      I SN      ++ +R  G++  F  I+  E L
Sbjct: 115 VLE--YLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL 158

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 16/140 (11%)

Query: 1   MTKYECLLFDVD----DTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNY 56
           M+ ++ ++FD D    D+    +   S          ++ + G   S      R     +
Sbjct: 1   MSGFDLIIFDCDGVLVDSEIIAAQVESR---------LLTEAGYPISVEEMGERFAGMTW 51

Query: 57  GTSMAGLKA-VGYDFDNDDYHSFVHG--RLPYENLKPDPVLRNLLLSLPIRKVIFSNADE 113
              +  +++                        ++K    ++  L  L   + I SN+  
Sbjct: 52  KNILLQVESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSS 111

Query: 114 IHVAKVLRKLGLEDCFDGIV 133
             +  +L K+GL+  F   +
Sbjct: 112 HRLDMMLTKVGLKPYFAPHI 131

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 28/255 (10%), Positives = 66/255 (25%), Gaps = 74/255 (29%)

Query: 1   MTKYECLLFDVD----DTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNY 56
           +      +FD+D    D++Y +   +            +    I  +         ++  
Sbjct: 3   LRPQTSFIFDLDGTLTDSVYQNVAAWKE---------ALDAENIPLAM--WRI---HRKI 48

Query: 57  GTSMAG-----LKAVGYDFDNDDYHSFVHGRLPY-----ENLKPDPVLRNLLLSLP---I 103
           G S         +  G    ++                   +   P    LL +L    +
Sbjct: 49  GMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENL 108

Query: 104 RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHH-- 161
           +  I ++         L+ L L+     IV           T  +         V++   
Sbjct: 109 KWCIATSGGIDTATINLKALKLDINKINIV-----------TRDD---------VSYGKP 148

Query: 162 ----FF---QRL--------FFDDSTRNIECGKSIGLHTVLVGTSR------RTKGADYA 200
               F    +++           D+  ++   +      V + +           GA   
Sbjct: 149 DPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRV 208

Query: 201 LENIHNIREAFPELW 215
            E+  ++     E+ 
Sbjct: 209 YEDPLDLLNHLDEIA 223

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 33/227 (14%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           M +   ++FD  +TL   +    ++ +      ++ ++G +  ++          Y  ++
Sbjct: 22  MKQPTAVIFDWYNTLI-DTSINIDRTTFY---QVLDQMGYKNIDLDSIPNSTIPKYLITL 77

Query: 61  AGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP---IRKVIFSNADEIHVA 117
            G +    +      +S    +   +N   +     LL +L    I   I SN +   + 
Sbjct: 78  LGKRWK--EATILYENSLEKSQK-SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLR 134

Query: 118 KVLRKLGLEDCFDGIVNFESL-----NPTNKTTGQELQLISMLRMVAHHF-----FQRLF 167
             +    L   FD I+          +P              +     +       +  F
Sbjct: 135 SEIHHKNLTHYFDSIIGSGDTGTIKPSPE------------PVLAALTNINIEPSKEVFF 182

Query: 168 FDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214
             DS  +I+     G   +  G++   K    + +N ++IR    +L
Sbjct: 183 IGDSISDIQSAIEAGCLPIKYGSTNIIK-DILSFKNFYDIRNFICQL 228

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 31/152 (20%), Positives = 46/152 (30%), Gaps = 30/152 (19%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           +T ++ L FD   TL             N  + + ++ G   +   E   V  +N     
Sbjct: 3   LTDFKALTFDCYGTLIDW-----ETGIVNALQPLAKRTGKTFTS-DELLEVFGRNESPQQ 56

Query: 61  AG-----------------LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP- 102
                               K  G + D  +   F       +N    P     L  L  
Sbjct: 57  TETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTS---VKNWPAFPDTVEALQYLKK 113

Query: 103 -IRKVIFSNADEIHVAKVLRKLGLEDCFDGIV 133
             + VI SN D         KLG+E  FD I+
Sbjct: 114 HYKLVILSNIDRNEFKLSNAKLGVE--FDHII 143

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 28/246 (11%), Positives = 59/246 (23%), Gaps = 54/246 (21%)

Query: 3   KYECLLFDVD----DTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGT 58
               +LFD+D         +                + ++   E      +     +   
Sbjct: 3   SRTLVLFDIDGTLLKVESMNRRVL---------ADALIEVYGTEGSTGSHDFSGKMDGAI 53

Query: 59  SMAGLKAVGYDFDNDD---------YHSFVHGRLPYENLKPDPVLRNLLLSL----PIRK 105
               L  VG +              Y +    R   E++     +R LL +L     +  
Sbjct: 54  IYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLL 113

Query: 106 VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ----LISMLRMVAHH 161
            + +   E      L+  G++  F                  +      L  +    A  
Sbjct: 114 GLLTGNFEASGRHKLKLPGIDHYFPFGA-----------FADDALDRNELPHIALERARR 162

Query: 162 FFQR-------LFFDDSTRNIECGKSIGLHTVLVGTSR------RTKGADYALENIHNIR 208
                      +   D+  +I C + +   ++ V T                 +N     
Sbjct: 163 MTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETD 222

Query: 209 EAFPEL 214
           E    +
Sbjct: 223 EVLASI 228

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 34/217 (15%), Positives = 61/217 (28%), Gaps = 54/217 (24%)

Query: 1   MTKYECLLFDVDDTLYSHSY-----GFSNKCSKNIEEYMIQK------LGIEESEVS--E 47
               + LL D+   L +         F     +NIEE           L  E+  ++  E
Sbjct: 25  SKGIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAE 84

Query: 48  FNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVI 107
           F   + +  G              +    +  +  L         +L  L     +   +
Sbjct: 85  FRDGIREMMG----------KMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREKYVV--YL 132

Query: 108 FSNADEIHVAKV------LRKLGLEDCFDGIVNFESLNPTNKTTGQE----------LQL 151
            SN ++IH   V       R   +ED F+    + S         +             +
Sbjct: 133 LSNTNDIHWKWVCKNAFPYRTFKVEDYFEKT--YLS--------YEMKMAKPEPEIFKAV 182

Query: 152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV 188
                +         F DDS  N +  + +G+ T   
Sbjct: 183 TEDAGIDPKET---FFIDDSEINCKVAQELGISTYTP 216

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 24/221 (10%), Positives = 59/221 (26%), Gaps = 44/221 (19%)

Query: 1   MT--KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESE----------VSEF 48
           M   K E ++F    T       F       +   +  K G+  +             + 
Sbjct: 1   MDRMKIEAVIFAWAGTTV-DYGCF---APLEVFMEIFHKRGVAITAEEARKPMGLLKIDH 56

Query: 49  NRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPY------ENLKPDPVLRNLLLSL- 101
            R L +    +    +         D                     P   ++ ++ SL 
Sbjct: 57  VRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116

Query: 102 --PIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ--------- 150
              I+    +      +  V ++  L+      +           T  ++          
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFL----------VTPDDVPAGRPYPWMC 166

Query: 151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS 191
             + + +  +     +   D+  +++ G++ G+ TV V   
Sbjct: 167 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 207

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.97
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.96
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.96
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.96
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.96
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.96
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.96
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.96
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.96
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.95
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.95
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.95
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.95
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.95
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.95
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.95
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.95
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.95
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.95
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.94
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.94
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.94
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.94
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.94
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.94
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.94
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.94
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.94
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.94
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.94
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.94
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.94
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.94
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.94
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.93
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.93
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.93
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.93
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.93
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.93
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.93
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.93
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.93
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.92
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.92
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.92
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.92
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.92
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.92
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.91
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.91
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.91
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.9
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.9
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.9
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.9
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.89
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.89
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.89
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.88
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.88
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.88
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.86
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.85
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.85
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.85
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.84
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.83
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.83
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.83
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.83
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.82
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.82
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.8
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.8
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.8
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.8
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.79
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.79
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.79
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.79
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.79
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.79
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.78
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.78
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.78
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.78
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.78
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.77
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.77
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.77
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.77
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.76
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.75
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.75
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.75
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.74
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.74
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.74
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.74
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.74
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.73
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.73
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.73
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.73
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.72
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.72
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.71
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.71
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.71
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.7
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.69
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.69
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.68
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.67
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.48
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.66
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.65
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.63
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.63
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.6
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.55
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.52
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.52
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.51
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.5
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.47
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.45
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.44
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.44
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.36
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.3
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.28
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.24
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.22
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.17
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.13
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.1
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	98.96
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.95
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.9
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.81
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.64
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.53
4gxt_A	385	A conserved functionally unknown protein; structur	98.51
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.43
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.31
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.19
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.03
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.02
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	97.84
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.74
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.65
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.61
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	97.46
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.45
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.44
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.42
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.41
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.4
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	97.32
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	97.23
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.18
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.14
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	95.77
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	95.6
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	93.68
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	92.4
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	85.5
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	80.47

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.97  E-value=1.1e-29  Score=198.10  Aligned_cols=212  Identities=25%  Similarity=0.434  Sum_probs=166.7

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCC
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGR   82 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (238)
                      ++|+|+||+||||+++...+...+..++.+++....+++......+...++..++....++.. ....+...+...+...
T Consensus        56 ~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~  134 (282)
T 3nuq_A           56 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDDS  134 (282)
T ss_dssp             CCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTTT
T ss_pred             CCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhhh
Confidence            479999999999999888888888888888777778998887777766677767766655544 3455667777665553


Q ss_pred             CC-CCCCCCChhHHHHHhcCCC-----CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HH
Q 035566           83 LP-YENLKPDPVLRNLLLSLPI-----RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-ML  155 (238)
Q Consensus        83 ~~-~~~~~~~~~~~~~l~~l~~-----~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~  155 (238)
                      .. .....++|++.++|+.++.     +.+++||+....+...++.+|+..+|+.+++++........++|++.++. ++
T Consensus       135 ~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~  214 (282)
T 3nuq_A          135 LPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAM  214 (282)
T ss_dssp             SCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHH
T ss_pred             hhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHH
Confidence            32 2357889999999988854     55699999999999999999999999999887665433122234666666 58


Q ss_pred             HhcCCCC-CeEEEEeCCccchhHHHhcCC-eEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          156 RMVAHHF-FQRLFFDDSTRNIECGKSIGL-HTVLVGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       156 ~~~~~~~-~~~v~vgD~~~di~~a~~~G~-~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      +++|++| ++|++|||+.+|+.||+.+|+ .++++..+..      ...++++++++.||.++++++|
T Consensus       215 ~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          215 KESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             HHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred             HHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence            9999999 999999999999999999999 5566665542      4578999999999999988775

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.96  E-value=2.8e-29  Score=187.72  Aligned_cols=195  Identities=18%  Similarity=0.249  Sum_probs=135.6

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCC-ChHh----H
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDF-DNDD----Y   75 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~   75 (238)
                      ||++|+|+||+||||+|+...+..++.+     ..+++|++......+    ....|............. ..++    +
T Consensus         1 mM~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~   71 (210)
T 2ah5_A            1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTI----RGFMGPPLESSFATCLSKDQISEAVQIY   71 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHH----HHTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred             CCCCCEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHcCccHHHHHHHHcCHHHHHHHHHHH
Confidence            7889999999999999976555555543     445567654222111    112232222111111110 0111    2


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      .+.+.... .....++||+.++|+.|+.  +.+++||++...+...++++|+..+|+.+++++  ...||    ++.++.
T Consensus        72 ~~~~~~~~-~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp----~p~~~~  144 (210)
T 2ah5_A           72 RSYYKAKG-IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPH----KADVIH  144 (210)
T ss_dssp             HHHHHHTG-GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCS----HHHHHH
T ss_pred             HHHHHHhc-cCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCC----ChHHHH
Confidence            22121111 1235678999998887754  467999999989999999999999999998876  44554    777777


Q ss_pred             H-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          154 M-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       154 ~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      . ++++|++|++|++|||+.+|+.+|+.+|+++++++++..      ...++++++++.||.+++
T Consensus       145 ~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l  209 (210)
T 2ah5_A          145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             HHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence            5 899999999999999999999999999999999987653      246899999999997754

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.96  E-value=1.1e-29  Score=194.92  Aligned_cols=127  Identities=17%  Similarity=0.211  Sum_probs=105.0

Q ss_pred             CCCCChhHHHHHhcCCCCe-EEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           87 NLKPDPVLRNLLLSLPIRK-VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~~-~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      ...++|++.++++.++..+ .+.+++........++++|+.++|+.++++++.+..||    .+.++. +++++|++|++
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP----~p~~~~~a~~~lg~~p~e  189 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASKNAINVLNHLGISDKFDFIADAGKCKNNKP----HPEIFLMSAKGLNVNPQN  189 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCTTHHHHHHHHTCGGGCSEECCGGGCCSCTT----SSHHHHHHHHHHTCCGGG
T ss_pred             ccccchhHHHHHHHHHhcccccccccccchhhhHhhhcccccccceeecccccCCCCC----cHHHHHHHHHHhCCChHH
Confidence            3467899999999887553 23333334556778999999999999999999988887    666666 58999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHH-HHHhHHhhhc
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNI-REAFPELWDA  217 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el-~~~l~~~~~~  217 (238)
                      |++|||+.+|+++|+++|+++|++++......||++++++.|| .+.|.+.|..
T Consensus       190 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~n~  243 (250)
T 4gib_A          190 CIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKYNE  243 (250)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHHHH
T ss_pred             eEEECCCHHHHHHHHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHHHH
Confidence            9999999999999999999999998877777899999999998 4667666654

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.96  E-value=9.3e-28  Score=182.22  Aligned_cols=203  Identities=21%  Similarity=0.249  Sum_probs=143.4

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHH--HH---HHHHHHhh--c-cchh---------hh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVS--EF---NRVLYKNY--G-TSMA---------GL   63 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~~~~~--~-~~~~---------~~   63 (238)
                      ||++|+|+||+||||+++...+..++.+     ..+++|++.....  .+   ....+..+  + ....         .+
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALL   78 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence            5679999999999999976666555553     4455676643211  11   01111110  0 0000         11


Q ss_pred             hhccCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCC
Q 035566           64 KAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPT  141 (238)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~  141 (238)
                      ...+.......+...+..... ....++|++.++|+.++.  +.+++||+....+...++.+|+..+|+.+++++..+..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~  157 (238)
T 3ed5_A           79 KEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQ  157 (238)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSC
T ss_pred             HHcCCCCcHHHHHHHHHHHHH-hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCC
Confidence            112233333333333322221 336788999999988764  46799999999999999999999999999999888887


Q ss_pred             CCCCCchHHHHH-HHHhcC-CCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHH
Q 035566          142 NKTTGQELQLIS-MLRMVA-HHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       142 k~~~~~~~~~~~-~~~~~~-~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~  213 (238)
                      ||    ++..+. +++++| ++|+++++|||+. +|+.||+.+|+.+++++++..    +..|+++++++.||.+++.+
T Consensus       158 kp----~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~  232 (238)
T 3ed5_A          158 KP----MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI  232 (238)
T ss_dssp             TT----CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred             CC----ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence            76    555555 589999 9999999999998 999999999999999988742    56799999999999987653

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.96  E-value=7.3e-29  Score=186.06  Aligned_cols=197  Identities=21%  Similarity=0.251  Sum_probs=135.6

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhHHHh
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDYHSF   78 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~   78 (238)
                      ||+|+||+||||+|+.+.+..++.+     +++++|++.....     +....|......     .........+.+.+.
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTEDL-----HRRIMGVPEREGLPILMEALEIKDSLENFKKR   70 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence            6899999999999976655555543     5566777644311     111112111111     111122222222221


Q ss_pred             hhCC---CCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           79 VHGR---LPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        79 ~~~~---~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      +.+.   .......++||+.++|+.|+.   +.+++||++...+...++.+|+.++|+.+++++..+..||    .+.++
T Consensus        71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP----~p~~~  146 (216)
T 3kbb_A           71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKP----DPEIY  146 (216)
T ss_dssp             HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTT----STHHH
T ss_pred             HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcc----cHHHH
Confidence            1110   111235678999999888753   4679999999999999999999999999999999998887    66666


Q ss_pred             H-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEE-ecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          153 S-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVL-VGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       153 ~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~-v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      . +++++|++|++|+||||+.+|+.+|+++||++|+ +.++..      ..+++ ++.+.+++.+.|.+++
T Consensus       147 ~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~-~i~~~~eli~~l~eLL  216 (216)
T 3kbb_A          147 LLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAV-ALVKPEEILNVLKEVL  216 (216)
T ss_dssp             HHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCS-EEECGGGHHHHHHHHC
T ss_pred             HHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCc-EECCHHHHHHHHHHHC
Confidence            6 4899999999999999999999999999999985 666543      22334 4557888888887753

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.96  E-value=1.6e-28  Score=185.86  Aligned_cols=199  Identities=16%  Similarity=0.212  Sum_probs=141.4

Q ss_pred             CCceeEEEEecCCceeeCccchhhHH-HHHHHHHHHHHhCCChhHHH-----HHHHHHHHhhccchhhhhhccCCCChHh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKC-SKNIEEYMIQKLGIEESEVS-----EFNRVLYKNYGTSMAGLKAVGYDFDNDD   74 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (238)
                      |+++|+|+||+||||+++...+...+ .+     ..++.|.+.....     .....+....+......        ...
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~   88 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQ-----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA--------TIL   88 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHH-----HHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHHH--------HHH
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHH-----HHHHcCCCHHHHHHHhCccHHHHHHHHhCchHHHH--------HHH
Confidence            67899999999999999877777777 54     3444555432110     01111111112111111        112


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      +...+..........++|++.++|+.++.+   .+++||+....+...++.+|+..+|+.+++++..+..||   +...+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp---~~~~~  165 (231)
T 3kzx_A           89 YENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKP---SPEPV  165 (231)
T ss_dssp             HHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTT---SSHHH
T ss_pred             HHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCC---ChHHH
Confidence            333333112234567889999999888644   679999999999999999999999999999988887776   33444


Q ss_pred             HHHHHhcCCCCC-eEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566          152 ISMLRMVAHHFF-QRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       152 ~~~~~~~~~~~~-~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      ..+++++|++|+ ++++|||+.+|+.+|+.+|+.+++++++.. ..+++++.++.||.+++.++++
T Consensus       166 ~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~~~~~el~~~l~~~l~  230 (231)
T 3kzx_A          166 LAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKNFYDIRNFICQLIN  230 (231)
T ss_dssp             HHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC------CCEEESSHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-CCCceeeCCHHHHHHHHHHHhc
Confidence            446899999998 999999999999999999999999977653 5789999999999999988764

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.96  E-value=1.9e-29  Score=192.76  Aligned_cols=189  Identities=16%  Similarity=0.182  Sum_probs=123.4

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH----------HHHHHHHHHhhccchh----hhhhc
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV----------SEFNRVLYKNYGTSMA----GLKAV   66 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~~~~~~----~~~~~   66 (238)
                      ||+||+|+||+||||+|+...+..++.+     +++++|++....          ......+....+....    .....
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQL   76 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHH
Confidence            5678999999999999965544444543     556677654321          0111111111111000    00000


Q ss_pred             cCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC
Q 035566           67 GYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK  143 (238)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~  143 (238)
                      .. .....+......   .....++||+.++++.++.+   .+++||+.  ....+++++|+..+|+.++++++.+..||
T Consensus        77 ~~-~~~~~~~~~~~~---~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP  150 (243)
T 4g9b_A           77 AY-RKNLLYVHSLRE---LTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKP  150 (243)
T ss_dssp             HH-HHHHHHHHHHHT---CCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTT
T ss_pred             HH-HHHHHHHHHHHh---cccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCC
Confidence            00 000001111111   12345789999999888644   45666654  45678999999999999999999988887


Q ss_pred             CCCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhH
Q 035566          144 TTGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHN  206 (238)
Q Consensus       144 ~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~e  206 (238)
                          .+.+|.. ++++|++|++|++|||+.+|+.+|+++|+++|+|+++.  ..++.++++..+
T Consensus       151 ----~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~--~~ad~~~~~~~~  208 (243)
T 4g9b_A          151 ----DPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL--TGAQLLLPSTES  208 (243)
T ss_dssp             ----STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC--CSCSEEESSGGG
T ss_pred             ----cHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC--CcHHHhcCChhh
Confidence                6666665 89999999999999999999999999999999999876  445555555554

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.96  E-value=1.4e-28  Score=185.46  Aligned_cols=199  Identities=20%  Similarity=0.271  Sum_probs=141.7

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCCh-------H
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDN-------D   73 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~   73 (238)
                      |+++|+|+||+||||+++...+...+.+     ..++.|++......    +....|.............+.       .
T Consensus         1 M~m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   71 (226)
T 3mc1_A            1 MSLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSS----LNKFVGPPLKTSFMEYYNFDEETATVAID   71 (226)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHTTTCCCSCGGG----GGGGSSSCHHHHHHHHHCCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhCCCHHHHHHHHH
Confidence            7779999999999999976656666654     44556665422111    111112211111110011111       1


Q ss_pred             hHHHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      .+.+.+.. .......++|++.++|+.++.   +.+++||+....+...++.+|+..+|+.+++++.....||    ++.
T Consensus        72 ~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~~~  146 (226)
T 3mc1_A           72 YYRDYFKA-KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLST----KED  146 (226)
T ss_dssp             HHHHHHTT-TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCS----HHH
T ss_pred             HHHHHHHH-hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCC----CHH
Confidence            12222222 122346789999999998864   4679999999999999999999999999999888877775    666


Q ss_pred             HHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566          151 LIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       151 ~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~  213 (238)
                      .+. +++++|++|+++++|||+.+|+.||+.+|+.+++++++..      +..||++++++.||.+++.+
T Consensus       147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~  216 (226)
T 3mc1_A          147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILE  216 (226)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHT
T ss_pred             HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHH
Confidence            666 5899999999999999999999999999999999987653      36799999999999987754

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.96  E-value=6.7e-28  Score=184.07  Aligned_cols=204  Identities=14%  Similarity=0.232  Sum_probs=140.8

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchh----hhh--hccCCCChHh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA----GLK--AVGYDFDNDD   74 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~   74 (238)
                      ||++|+|+||+||||+++...+...+.+     ..+++|++.....     .....|....    .+.  ..+...+.+.
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   89 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPNHAESWHK-----IMKRFGFGLSREE-----AYMHEGRTGASTINIVSRRERGHDATEEE   89 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHHH
T ss_pred             CCCCCEEEECCCCccCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCChHHHHHHHHHHhcCCCCCHHH
Confidence            4678999999999999976666556554     3445666543311     1111111110    000  0122223222


Q ss_pred             HHHh---hhCC-CCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc--ceeeecccCCCCCCCC
Q 035566           75 YHSF---VHGR-LPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF--DGIVNFESLNPTNKTT  145 (238)
Q Consensus        75 ~~~~---~~~~-~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f--~~i~~~~~~~~~k~~~  145 (238)
                      ....   .... .......++|++.++|+.++.+   .+++||+....+...++. |+..+|  +.+++++.....||  
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp--  166 (247)
T 3dv9_A           90 IKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKP--  166 (247)
T ss_dssp             HHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTT--
T ss_pred             HHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCC--
Confidence            2111   1100 1113467889999999888644   679999998888888998 999999  88999888877776  


Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhhhcc
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELWDAD  218 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~~~~  218 (238)
                       +...+..+++++|++|++|++|||+.+|+.||+.+|+.+++++++..      ...|+++++++.||.+++.++.++.
T Consensus       167 -~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~  244 (247)
T 3dv9_A          167 -NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQSAL  244 (247)
T ss_dssp             -SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHHHh
Confidence             33444446999999999999999999999999999999999988763      2479999999999999999887754

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.95  E-value=7.8e-28  Score=183.62  Aligned_cols=197  Identities=15%  Similarity=0.279  Sum_probs=139.3

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchh----hh-h-hccCCCChHh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA----GL-K-AVGYDFDNDD   74 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~~~~~~~~~   74 (238)
                      ||++|+|+||+||||+++...+...+.+     ..+++|+......     +....|....    .+ . ..+...+.+.
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   90 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPYHSEAWHQ-----VMKTHGLDLSREE-----AYMHEGRTGASTINIVFQRELGKEATQEE   90 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHHH
T ss_pred             cccCCEEEEcCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHHhCCCHHHHHHHHHHHHhCCCCCHHH
Confidence            6779999999999999976666556554     3445676643321     1111111100    00 0 0122222222


Q ss_pred             HH-------HhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccc--ceeeecccCCCCC
Q 035566           75 YH-------SFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCF--DGIVNFESLNPTN  142 (238)
Q Consensus        75 ~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f--~~i~~~~~~~~~k  142 (238)
                      +.       ..+..   .....++|++.++|+.++.   +.+++||+....+...++. ++..+|  +.+++++.....|
T Consensus        91 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~k  166 (243)
T 3qxg_A           91 IESIYHEKSILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGK  166 (243)
T ss_dssp             HHHHHHHHHHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCT
T ss_pred             HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCC
Confidence            21       11211   1346788999999988864   3679999998888888888 999999  8899988887777


Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~  214 (238)
                      |   +...+..+++++|++|++|++|||+.+|+.||+.+|+.+++++++..      ...||++++++.||.+++.++
T Consensus       167 p---~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l  241 (243)
T 3qxg_A          167 P---NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI  241 (243)
T ss_dssp             T---SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred             C---ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence            6   33444446999999999999999999999999999999999988764      236999999999999988765

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.95  E-value=4.1e-27  Score=181.55  Aligned_cols=207  Identities=14%  Similarity=0.177  Sum_probs=141.1

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-hhc-------cchhhh---------h
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK-NYG-------TSMAGL---------K   64 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~-------~~~~~~---------~   64 (238)
                      +++|+|+||+||||+|+...+..++.+.+.. +...+|++... ..+...+.. ..+       .....+         .
T Consensus        16 ~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (260)
T 2gfh_A           16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEA-EIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ   93 (260)
T ss_dssp             CCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHH-HHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred             ccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcHHH-HHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHH
Confidence            5689999999999999766555666554433 33456666422 111111111 111       111110         0


Q ss_pred             hc-cCCCChH---hHHHhhhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccC
Q 035566           65 AV-GYDFDND---DYHSFVHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL  138 (238)
Q Consensus        65 ~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~  138 (238)
                      .. ......+   .+...+... ....++++||+.++|+.|+.  +.+|+||++...+...++.+|+..+|+.++++++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~  172 (260)
T 2gfh_A           94 ETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ  172 (260)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred             HhcCccchHHHHHHHHHHHHHH-HHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCC
Confidence            00 0111111   111111110 01246789999999998864  36899999999999999999999999999998888


Q ss_pred             CCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCC-ccchhHHHhcCC-eEEEecCCCC-----CccccccccChhHHHHH
Q 035566          139 NPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDS-TRNIECGKSIGL-HTVLVGTSRR-----TKGADYALENIHNIREA  210 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~-~~di~~a~~~G~-~~i~v~~~~~-----~~~ad~v~~~~~el~~~  210 (238)
                      +..||    .+.++. +++++|++|++|++|||+ .+|+.+|+++|+ .+++++++..     ...++++++++.||.++
T Consensus       173 ~~~KP----~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~  248 (260)
T 2gfh_A          173 KEEKP----APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPAL  248 (260)
T ss_dssp             SSCTT----CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred             CCCCC----CHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence            77776    666666 489999999999999995 999999999999 8999976532     35689999999999988


Q ss_pred             hHHhh
Q 035566          211 FPELW  215 (238)
Q Consensus       211 l~~~~  215 (238)
                      +..+.
T Consensus       249 l~~~~  253 (260)
T 2gfh_A          249 LQSID  253 (260)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            86653

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.95  E-value=1.2e-27  Score=178.52  Aligned_cols=196  Identities=13%  Similarity=0.192  Sum_probs=137.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh----hh-hccCCCChHh---
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG----LK-AVGYDFDNDD---   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~---   74 (238)
                      ++|+|+||+||||+++...+..++.+     ..++.|.+.....     +....+.....    +. ..+.......   
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   73 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRAS-----FLGQKGISIDHLP-----PSFFIGGNTKQVWENILRDEYDKWDVSTLQE   73 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCTTSC-----HHHHTTSCGGGCHHHHHGGGGGGSCHHHHHH
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHhhcCCCCHHHHHH
Confidence            48999999999999976655555554     4444565432211     11111211111    10 1111122222   


Q ss_pred             -HHHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           75 -YHSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        75 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                       +..............++|++.++|+.++.   +.+++||+....+...++.+|+..+|+.+++++..+..||   +...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~~~  150 (214)
T 3e58_A           74 EYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKP---NPEI  150 (214)
T ss_dssp             HHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTT---SSHH
T ss_pred             HHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCC---ChHH
Confidence             22222222221234678999999988864   3679999999999999999999999999999988888776   3444


Q ss_pred             HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566          151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF  211 (238)
Q Consensus       151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l  211 (238)
                      +..+++++|++|+++++|||+.+|+.+|+.+|+++++++++.   ....|+++++++.||.+++
T Consensus       151 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~i  214 (214)
T 3e58_A          151 YLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDLI  214 (214)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGGC
T ss_pred             HHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhhC
Confidence            555699999999999999999999999999999999998753   2578999999999987653

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.95  E-value=2.5e-27  Score=178.88  Aligned_cols=203  Identities=15%  Similarity=0.217  Sum_probs=140.0

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChH--
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDND--   73 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--   73 (238)
                      |+++|+|+||+||||+++...+...+.+     ..+++|++......+.    ...|......     ...+......  
T Consensus         1 M~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~   71 (229)
T 2fdr_A            1 MSGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGE----RFAGMTWKNILLQVESEASIPLSASLL   71 (229)
T ss_dssp             --CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHHH----HHTTCCHHHHHHHHHHHHCCCCCTHHH
T ss_pred             CCCccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHHHHH----HHhCCCHHHHHHHHHHHcCCCCCHHHH
Confidence            7778999999999999976555555443     3455676543211111    1112111111     0111111111  


Q ss_pred             -hHHHhhhCCCCCCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCC--CCCCCchH
Q 035566           74 -DYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPT--NKTTGQEL  149 (238)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~--k~~~~~~~  149 (238)
                       .+.+.+.... .....++|++.++|+.++.+.+++|++....+...++.+++..+| +.+++++.....  ||   +..
T Consensus        72 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kp---k~~  147 (229)
T 2fdr_A           72 DKSEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKP---KPD  147 (229)
T ss_dssp             HHHHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTT---SSH
T ss_pred             HHHHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCc---CHH
Confidence             1111111111 123567899999999998888999999999999999999999999 888888876666  65   445


Q ss_pred             HHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCC---------c-cccccccChhHHHHHhHHhhh
Q 035566          150 QLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRT---------K-GADYALENIHNIREAFPELWD  216 (238)
Q Consensus       150 ~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~---------~-~ad~v~~~~~el~~~l~~~~~  216 (238)
                      .+..+++++|++|+++++|||+.||+.||+.+|+.+++++++...         . +|+++++++.|+.+++..++.
T Consensus       148 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~  224 (229)
T 2fdr_A          148 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAE  224 (229)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHTC
T ss_pred             HHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHhhh
Confidence            555569999999999999999999999999999999999887541         1 389999999999998877643

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.95  E-value=1.3e-26  Score=175.98  Aligned_cols=122  Identities=17%  Similarity=0.264  Sum_probs=106.4

Q ss_pred             CCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ...++|++.++|+.++.  +.+++||++...+...++.+|+..+|+.+++++..+..||    ++.+++ +++++|++|+
T Consensus       105 ~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~lgi~~~  180 (240)
T 3qnm_A          105 KSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKP----RPEIFHFALSATQSELR  180 (240)
T ss_dssp             CCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTT----SHHHHHHHHHHTTCCGG
T ss_pred             cCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCC----CHHHHHHHHHHcCCCcc
Confidence            36788999999988872  2579999999999999999999999999999998888776    555555 5899999999


Q ss_pred             eEEEEeCCc-cchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhH
Q 035566          164 QRLFFDDST-RNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFP  212 (238)
Q Consensus       164 ~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~  212 (238)
                      ++++|||++ +|+.+|+.+|+.+++++++..   ...||++++++.|+.++.+
T Consensus       181 ~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~~  233 (240)
T 3qnm_A          181 ESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLLE  233 (240)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHTC
T ss_pred             cEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHHh
Confidence            999999996 999999999999999988862   5689999999999988654

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.95  E-value=1.9e-27  Score=179.95  Aligned_cols=198  Identities=14%  Similarity=0.113  Sum_probs=137.8

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhH
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDY   75 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   75 (238)
                      |+++|+|+||+||||+++...+...+.+     ..++.|++.....     +....+......     ...+...+.+..
T Consensus         3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   72 (233)
T 3s6j_A            3 LRPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWR-----IHRKIGMSGGLMLKSLSRETGMSITDEQA   72 (233)
T ss_dssp             --CCCEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHC----CCHHHH
T ss_pred             CCcCcEEEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCcHHHHHHHHHHhcCCCCCHHHH
Confidence            4568999999999999975555555543     4455676643321     111122221111     011111222211


Q ss_pred             -------HHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           76 -------HSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        76 -------~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                             .+.+...  .....++|++.++|+.++.   +.+++||+....+...++.+|+..+|+.+++++.....||  
T Consensus        73 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp--  148 (233)
T 3s6j_A           73 ERLSEKHAQAYERL--QHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKP--  148 (233)
T ss_dssp             HHHHHHHHHHHHHT--GGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTT--
T ss_pred             HHHHHHHHHHHHHh--hccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCC--
Confidence                   1111111  1346778999999988854   4689999999999999999999999999999988887776  


Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~  213 (238)
                       +...+..+++++|++|+++++|||+.+|+.||+.+|++++++.++..      ..+||++++++.||.+++.+
T Consensus       149 -~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~  221 (233)
T 3s6j_A          149 -DPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDE  221 (233)
T ss_dssp             -STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGG
T ss_pred             -ChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHH
Confidence             34444456999999999999999999999999999999999987642      33599999999999987754

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.95  E-value=4.3e-27  Score=179.34  Aligned_cols=121  Identities=17%  Similarity=0.199  Sum_probs=102.5

Q ss_pred             CCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           86 ENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      ....++||+.++|+.|+.   +.+++||++...+...++++|+. +|+.+++++.....||    ++.++. +++++|++
T Consensus       107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp----~p~~~~~~~~~l~~~  181 (240)
T 2hi0_A          107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRKP----APDMTSECVKVLGVP  181 (240)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCTT----SSHHHHHHHHHHTCC
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCCC----CHHHHHHHHHHcCCC
Confidence            346788999999988864   36799999988899999999998 9999998887777776    445544 68999999


Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      |++|++|||+.+|+.+|+.+|+.++++.++..      ...+++++.++.|+.+++
T Consensus       182 ~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l  237 (240)
T 2hi0_A          182 RDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI  237 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred             HHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence            99999999999999999999999999987642      236899999999987765

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.95  E-value=1.3e-27  Score=180.09  Aligned_cols=202  Identities=21%  Similarity=0.219  Sum_probs=139.9

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--c-CCCC--hHhHHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--G-YDFD--NDDYHS   77 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~   77 (238)
                      ++|+|+||+||||+++...+..++.+     +.+..|++......    +...+|.........  + ....  ...+.+
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEEYYPDN----VTKYIGGGVRALLEKVLKDKFREEYVEVFRK   72 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHH-----HHHHTTCGGGCCSC----GGGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence            48999999999999976555555543     44556654211110    111112211111100  0 0000  122333


Q ss_pred             hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-
Q 035566           78 FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-  153 (238)
                      .+.... .....++||+.++|+.++.+   .+++||+....+...++.+|+..+|+.++++++....||    ++..+. 
T Consensus        73 ~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp----~~~~~~~  147 (222)
T 2nyv_A           73 HYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKP----SPTPVLK  147 (222)
T ss_dssp             HHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCC----TTHHHHH
T ss_pred             HHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCC----ChHHHHH
Confidence            222221 24567899999999888643   679999999999999999999999999998887777765    455555 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhHHhhhcc
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFPELWDAD  218 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~~~~~~~  218 (238)
                      +++++|++|+++++|||+.+|+.+|+.+|+.++++.++..   ...++++++++.|+.+++.+..++-
T Consensus       148 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~~~~~~  215 (222)
T 2nyv_A          148 TLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNHIVEF  215 (222)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHHTTSSEE
T ss_pred             HHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHHHhhhhh
Confidence            5899999999999999999999999999999999987642   2568999999999998887655543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.95  E-value=3.2e-27  Score=176.15  Aligned_cols=192  Identities=15%  Similarity=0.200  Sum_probs=134.7

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChH-------hH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDND-------DY   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~   75 (238)
                      ++|+|+||+||||+++...+...+.+     ..++.|.+.... .    +....|.....+... ......       .+
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~----~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~   71 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPA-Q----AQKTFPMAAEQAMTE-LGIAASEFDHFQAQY   71 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHH-H----HHHHTTSCHHHHHHH-TTCCGGGHHHHHHHH
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHH-----HHHHhCCCCCHH-H----HHHHcCCcHHHHHHH-cCCCHHHHHHHHHHH
Confidence            47999999999999976555555543     344456543221 1    111223322222111 111111       11


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH-
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI-  152 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~-  152 (238)
                      ......  ......++|++.++|+.++.+  .+++||++...+...++.+|+..+|+.+++++..+..||    .+..+ 
T Consensus        72 ~~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP----~~~~~~  145 (209)
T 2hdo_A           72 EDVMAS--HYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKP----DPLPLL  145 (209)
T ss_dssp             HHHHTT--CGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTT----SSHHHH
T ss_pred             HHHHhh--hcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCC----CcHHHH
Confidence            111111  123467889999999988764  679999999999999999999999999999888887776    44444 


Q ss_pred             HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566          153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF  211 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l  211 (238)
                      .+++++|++|+++++|||+.+|+.+|+.+|+.+++++++..    ...|++++.++.||.+++
T Consensus       146 ~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l  208 (209)
T 2hdo_A          146 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF  208 (209)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred             HHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence            46899999999999999999999999999999999986532    222999999999987654

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.94  E-value=3.4e-27  Score=181.71  Aligned_cols=199  Identities=15%  Similarity=0.095  Sum_probs=140.0

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCCh---
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDN---   72 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---   72 (238)
                      ||++|+|+||+||||+++...+...+.+     ..++.|++......+.    ...|.......     ..+.....   
T Consensus        25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~   95 (259)
T 4eek_A           25 DAPFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTEIAM----YFTGQRFDGVLAYLAQQHDFVPPPDFL   95 (259)
T ss_dssp             CCCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHHHHH----HTTTCCHHHHHHHHHHHHCCCCCTTHH
T ss_pred             hcCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHHHHH----HHhCCCHHHHHHHHHHHcCCCCCHHHH
Confidence            3568999999999999976555555543     4455666643221111    11121111110     11212211   


Q ss_pred             HhHHHhhhCCCCCCCCCCChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccce-eeecccCC-CCCCCCCc
Q 035566           73 DDYHSFVHGRLPYENLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDG-IVNFESLN-PTNKTTGQ  147 (238)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~-i~~~~~~~-~~k~~~~~  147 (238)
                      ..+.+.+.+..  ....++|++.++|+.++   .+.+++||+....+...++.+|+..+|+. +++++..+ ..||   +
T Consensus        96 ~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp---~  170 (259)
T 4eek_A           96 DVLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKP---H  170 (259)
T ss_dssp             HHHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTT---S
T ss_pred             HHHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCC---C
Confidence            12222222111  44678899999998885   45789999999999999999999999999 88888887 7776   3


Q ss_pred             hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----------CccccccccChhHHHHHhHH
Q 035566          148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----------~~~ad~v~~~~~el~~~l~~  213 (238)
                      ...+..+++++|++|+++++|||+.+|+.+|+.+|+.+++++++..          ...||++++++.||.+++..
T Consensus       171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~  246 (259)
T 4eek_A          171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE  246 (259)
T ss_dssp             SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence            4444446999999999999999999999999999999999987632          24689999999999998865

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.94  E-value=2.7e-26  Score=173.66  Aligned_cols=202  Identities=12%  Similarity=0.145  Sum_probs=136.7

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHH--HHHHH---HHHh---hccchh-------hhhh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVS--EFNRV---LYKN---YGTSMA-------GLKA   65 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~---~~~~---~~~~~~-------~~~~   65 (238)
                      |+++|+|+||+||||+++...+...+.+     +.++.|.......  .+...   .+..   .|....       .+..
T Consensus         1 M~m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   75 (235)
T 2om6_A            1 MREVKLVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAG   75 (235)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHH
T ss_pred             CCCceEEEEeCCCCCCCcchhHHHHHHH-----HHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHH
Confidence            6568999999999999965555555543     3444566543221  11110   0000   022211       1111


Q ss_pred             ccCCCChH---hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCC---hHHHHHHHHhcCcccccceeeecc
Q 035566           66 VGYDFDND---DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNAD---EIHVAKVLRKLGLEDCFDGIVNFE  136 (238)
Q Consensus        66 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~---~~~~~~~l~~~~~~~~f~~i~~~~  136 (238)
                       ....+..   .....+..... . ..++|++.++|+.++..   .+++||+.   ...+...++.+|+..+|+.+++++
T Consensus        76 -~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~  152 (235)
T 2om6_A           76 -KLKVDVELVKRATARAILNVD-E-SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD  152 (235)
T ss_dssp             -HHTCCHHHHHHHHHHHHHHCC-G-GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHH
T ss_pred             -HhCCCHHHHHHHHHHHHHhcc-c-cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecc
Confidence             0111211   11111111111 1 23589999998887643   57999998   888889999999999999999988


Q ss_pred             cCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHH
Q 035566          137 SLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREA  210 (238)
Q Consensus       137 ~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~  210 (238)
                      ..+..||    .+.++. +++++|++|++|++|||+. ||++||+.+|+.+++++++..    ...++++++++.||.++
T Consensus       153 ~~~~~kp----~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  228 (235)
T 2om6_A          153 EVLSYKP----RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV  228 (235)
T ss_dssp             HHTCCTT----CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred             ccCCCCC----CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence            8887776    556655 5899999999999999999 999999999999999987642    23578999999999988


Q ss_pred             hHHh
Q 035566          211 FPEL  214 (238)
Q Consensus       211 l~~~  214 (238)
                      +..+
T Consensus       229 l~~~  232 (235)
T 2om6_A          229 IELI  232 (235)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            7654

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.94  E-value=2.4e-27  Score=180.03  Aligned_cols=199  Identities=14%  Similarity=0.162  Sum_probs=137.2

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--cCCCCh-------
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--GYDFDN-------   72 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------   72 (238)
                      +++|+|+||+||||+++...+...+.+     ..+++|..... ..    +....|.........  ......       
T Consensus        17 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   86 (237)
T 4ex6_A           17 AADRGVILDLDGTLADTPAAIATITAE-----VLAAMGTAVSR-GA----ILSTVGRPLPASLAGLLGVPVEDPRVAEAT   86 (237)
T ss_dssp             CCCEEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCH-HH----HHHHTTSCHHHHHHHHHTSCTTSHHHHHHH
T ss_pred             ccCCEEEEcCCCCCcCCHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHhcCccHHHHHHHHhCCCCCHHHHHHHH
Confidence            468999999999999976666566654     33444522211 11    111112211111100  011011       


Q ss_pred             HhHHHhhhCCCC-CCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch
Q 035566           73 DDYHSFVHGRLP-YENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE  148 (238)
Q Consensus        73 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~  148 (238)
                      ..+...+...+. .....++|++.++|+.++..   .+++||+....+...++.+|+..+|+.+++++.....||   +.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~  163 (237)
T 4ex6_A           87 EEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKP---HP  163 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTT---SS
T ss_pred             HHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCC---CH
Confidence            111111111110 02356789999999988654   579999999999999999999999999999988877776   34


Q ss_pred             HHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566          149 LQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       149 ~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~  213 (238)
                      ..+..+++++|++|++|++|||+.+|+.||+.+|+.++++.++..      ...|++++.++.||.++|..
T Consensus       164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~  234 (237)
T 4ex6_A          164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD  234 (237)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence            444456999999999999999999999999999999999988753      24799999999999987754

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.94  E-value=7.6e-26  Score=170.84  Aligned_cols=125  Identities=15%  Similarity=0.222  Sum_probs=107.7

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      ....++|++.++|+.++..   .+++||++...+...++.+|+..+|+.+++++.....||    ++..+. +++++|++
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~~~~~  168 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKP----HQKVYELAMDTLHLG  168 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTT----CHHHHHHHHHHHTCC
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCC----ChHHHHHHHHHhCCC
Confidence            4467889999999888644   679999999999999999999999999999988887776    555555 58999999


Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHhHHh
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l~~~  214 (238)
                      |+++++|||+.+|+.+|+.+|+.+++++++..     +..|+++++++.||.+++.++
T Consensus       169 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  226 (230)
T 3um9_A          169 ESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV  226 (230)
T ss_dssp             GGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred             cccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence            99999999999999999999999999987653     457999999999999887654

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.94  E-value=3.6e-27  Score=175.47  Aligned_cols=188  Identities=19%  Similarity=0.283  Sum_probs=130.8

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVH   80 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (238)
                      ||++|+|+||+||||+++...+.         .+.++.|++....  +...+ .  +........      ...+...+.
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~~~---------~~~~~~g~~~~~~--~~~~~-~--~~~~~~~~~------~~~~~~~~~   62 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHDFA---------AIREALSIPAEDD--ILTHL-A--ALPADESAA------KHAWLLEHE   62 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEECHH---------HHHHHTTCCTTSC--HHHHH-H--HSCHHHHHH------HHHHHHHTH
T ss_pred             cccCCEEEEeCCCcCcccHHHHH---------HHHHHhCCCchHH--HHHHH-h--cCChHHHHH------HHHHHHHHH
Confidence            56789999999999999644322         1445677664421  11111 0  111110000      011111111


Q ss_pred             CCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc--ceeeecccCCCCCCCCCchHHHHHHH
Q 035566           81 GRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF--DGIVNFESLNPTNKTTGQELQLISML  155 (238)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f--~~i~~~~~~~~~k~~~~~~~~~~~~~  155 (238)
                      ..+ .....++|++.++|+.++.+   .+++||+....+...++.+|+..+|  +.+++.+. ...||   +...+..++
T Consensus        63 ~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp---~~~~~~~~~  137 (205)
T 3m9l_A           63 RDL-AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKP---HPGGLLKLA  137 (205)
T ss_dssp             HHH-EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTT---SSHHHHHHH
T ss_pred             HHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCC---CHHHHHHHH
Confidence            111 12356789999999888644   6799999999999999999999999  77776654 55655   334444568


Q ss_pred             HhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhHHHHHhHH
Q 035566          156 RMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~el~~~l~~  213 (238)
                      +++|++|++|++|||+.+|+.+|+.+|+.+|++.++..  +..||++++++.||...+..
T Consensus       138 ~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~  197 (205)
T 3m9l_A          138 EAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA  197 (205)
T ss_dssp             HHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred             HHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence            99999999999999999999999999999999988765  55699999999999887753

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.94  E-value=6.9e-26  Score=171.89  Aligned_cols=200  Identities=19%  Similarity=0.192  Sum_probs=137.9

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHh---hc-----cc--------hhhh-h
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKN---YG-----TS--------MAGL-K   64 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~-----~~--------~~~~-~   64 (238)
                      |++|+|+||+||||+++...+...+.+     ..++.|++..... +...+...   ..     ..        ...+ .
T Consensus         4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (240)
T 3smv_A            4 TDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSDE-LLEVFGRNESPQQTETPGALYQDILRAVYDRIAK   77 (240)
T ss_dssp             GGCSEEEECCBTTTBCHHHHHHHHTHH-----HHHHHTCCCCHHH-HHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHH
T ss_pred             ccceEEEEeCCCcCcCCchhHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHH
Confidence            468999999999999976656666654     3344676643211 11111100   00     00        0001 1


Q ss_pred             hccCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCC
Q 035566           65 AVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTN  142 (238)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k  142 (238)
                      ..+.....+. ...+....  ....++|++.++|+.++.  +.+++||++...+...++.  +..+|+.++++++.+..|
T Consensus        78 ~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~K  152 (240)
T 3smv_A           78 EWGLEPDAAE-REEFGTSV--KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSYK  152 (240)
T ss_dssp             HTTCCCCHHH-HHHHHTGG--GGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSCT
T ss_pred             HhCCCCCHHH-HHHHHHHH--hcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCCC
Confidence            1122222222 22222221  346788999999988864  4689999999888888887  557899999999888888


Q ss_pred             CCCCchHHHHH-H---HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCC-----------C-CCccccccccChh
Q 035566          143 KTTGQELQLIS-M---LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTS-----------R-RTKGADYALENIH  205 (238)
Q Consensus       143 ~~~~~~~~~~~-~---~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~-----------~-~~~~ad~v~~~~~  205 (238)
                      |    .+.++. +   ++++|++|++|++|||+. +|+.+|+.+|+.+++++++           . ....||++++++.
T Consensus       153 P----~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~  228 (240)
T 3smv_A          153 P----NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMG  228 (240)
T ss_dssp             T----SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHH
T ss_pred             C----CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHH
Confidence            6    666555 4   688999999999999996 9999999999999999865           1 1478999999999


Q ss_pred             HHHHHhHHhhh
Q 035566          206 NIREAFPELWD  216 (238)
Q Consensus       206 el~~~l~~~~~  216 (238)
                      ||.+++.++++
T Consensus       229 el~~~l~~~l~  239 (240)
T 3smv_A          229 EMAEAHKQALK  239 (240)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999887653

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.94  E-value=1.5e-26  Score=179.43  Aligned_cols=127  Identities=14%  Similarity=0.063  Sum_probs=108.1

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccc-cceeeecccCCCCCCCCCchHHHHHHHHhcCCCC-
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDC-FDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF-  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~-f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-  162 (238)
                      ..++|++.++|+.++.   +.+++||+....+...++.+|+..+ |+.+++++.....||   +...+..+++++|++| 
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp---~~~~~~~~~~~lgi~~~  186 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRP---FPDMALKVALELEVGHV  186 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTT---SSHHHHHHHHHHTCSCG
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCC---CHHHHHHHHHHcCCCCC
Confidence            5788999999988864   4679999999999999999998888 899999888777776   3444555699999999 


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHHhHH
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~l~~  213 (238)
                      ++|++|||+.+|+.||+.+|+.+++|.++..                             ..+||++++++.||.+++.+
T Consensus       187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~  266 (277)
T 3iru_A          187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITD  266 (277)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHH
T ss_pred             ccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHH
Confidence            9999999999999999999999999988841                             34699999999999999887


Q ss_pred             hhhc
Q 035566          214 LWDA  217 (238)
Q Consensus       214 ~~~~  217 (238)
                      +-++
T Consensus       267 ~~~~  270 (277)
T 3iru_A          267 VNRR  270 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.94  E-value=1.7e-26  Score=174.89  Aligned_cols=122  Identities=14%  Similarity=0.123  Sum_probs=106.8

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ..++|++.++|+.++.+   .+++||++...+...++.+|+..+|+.+++++.....||    .+.++. +++++|++|+
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~~~~~~~  173 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKT----APAAYALAPRAFGVPAA  173 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTT----SHHHHTHHHHHHTSCGG
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCc----CHHHHHHHHHHhCCCcc
Confidence            67789999999888644   689999999999999999999999999999988888876    555555 5899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHhHH
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l~~  213 (238)
                      +|++|||+.+|+.+|+.+|+.+++++++..     +..|+++++++.||.+++.+
T Consensus       174 ~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~  228 (233)
T 3umb_A          174 QILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQA  228 (233)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred             cEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence            999999999999999999999999977653     45699999999999998765

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.94  E-value=2.8e-27  Score=181.26  Aligned_cols=197  Identities=12%  Similarity=0.134  Sum_probs=135.1

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh----h-hhccCCCChHhH
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG----L-KAVGYDFDNDDY   75 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~   75 (238)
                      |+++|+|+||+||||+++...+..++.+     +.+++|++.....     +....|.....    + ...+.....+.+
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   96 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWDV-----KSLVMGKKALEAAQIIIDVLQLPMSKEEL   96 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTCCHHHHHHHHHHHHTCSSCHHHH
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence            3568999999999999965555555553     4455666532211     11111211111    0 111222222222


Q ss_pred             HH----hhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHh-cCcccccceeeecc--cCCCCCCCC
Q 035566           76 HS----FVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRK-LGLEDCFDGIVNFE--SLNPTNKTT  145 (238)
Q Consensus        76 ~~----~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~-~~~~~~f~~i~~~~--~~~~~k~~~  145 (238)
                      ..    .+....  ....++|++.++|+.++.   +.+++||+....+...+.. +|+..+|+.+++++  .....||  
T Consensus        97 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp--  172 (250)
T 3l5k_A           97 VEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKP--  172 (250)
T ss_dssp             HHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTT--
T ss_pred             HHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCC--
Confidence            22    111111  346788999999988864   4679999988777776654 58889999999888  7777776  


Q ss_pred             CchHHHHH-HHHhcCCCC--CeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHH
Q 035566          146 GQELQLIS-MLRMVAHHF--FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~~~~--~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~  213 (238)
                        .+.++. +++++|++|  ++|++|||+.+|+.+|+.+|+.+++++++..    +..||++++++.||.+.+..
T Consensus       173 --~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~  245 (250)
T 3l5k_A          173 --DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFG  245 (250)
T ss_dssp             --STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGT
T ss_pred             --ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhc
Confidence              555555 589999988  9999999999999999999999999988763    57899999999998766543

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.94  E-value=1.7e-26  Score=175.82  Aligned_cols=194  Identities=19%  Similarity=0.284  Sum_probs=138.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChH-------hH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDND-------DY   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~   75 (238)
                      ++|+|+||+||||+++...+..++..     +.++.|.+... .    .+....|.............+.+       .+
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   97 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQY-----SLNSFGIKEDL-E----NLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKY   97 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCG-G----GGGGGSSSCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHHhCccHHHHHHHHhCCCHHHHHHHHHHH
Confidence            36999999999999976656555554     44556665211 1    11111122211111111122221       12


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      .+.+... ......++|++.++|+.++..   .+++||+....+...++.+|+..+|+.+++++.....||    ++..+
T Consensus        98 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~~~~~  172 (240)
T 3sd7_A           98 REYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVN----KNEVI  172 (240)
T ss_dssp             HHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCC----HHHHH
T ss_pred             HHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCC----CHHHH
Confidence            2222221 123467889999999888644   679999999999999999999999999999988877776    66666


Q ss_pred             H-HHHhcCCC-CCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          153 S-MLRMVAHH-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       153 ~-~~~~~~~~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      . +++++|++ |+++++|||+.+|+.+|+.+|+.+++++++..      +..|+++++++.||.++|
T Consensus       173 ~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l  239 (240)
T 3sd7_A          173 QYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL  239 (240)
T ss_dssp             HHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred             HHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence            6 58999999 99999999999999999999999999987653      367999999999998865

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.94  E-value=4.9e-26  Score=174.22  Aligned_cols=122  Identities=15%  Similarity=0.150  Sum_probs=103.5

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCC
Q 035566           86 ENLKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHF  162 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~  162 (238)
                      ....++|++.++|+.++  .+.+++||++...+...++.+|+.  |+.+++++.....||    ++..++ +++++|++|
T Consensus       113 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp----~~~~~~~~~~~lgi~~  186 (254)
T 3umg_A          113 HVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRKYKP----DPQAYLRTAQVLGLHP  186 (254)
T ss_dssp             GSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTCCTT----SHHHHHHHHHHTTCCG
T ss_pred             hhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCCCCC----CHHHHHHHHHHcCCCh
Confidence            34677899999988776  446899999999999999999986  899888888888876    555555 589999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEec----CCC-------CCccccccccChhHHHHHhHH
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVG----TSR-------RTKGADYALENIHNIREAFPE  213 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~----~~~-------~~~~ad~v~~~~~el~~~l~~  213 (238)
                      +++++|||+.||+.+|+.+|+.+++++    ++.       ....||++++++.||.+++..
T Consensus       187 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~  248 (254)
T 3umg_A          187 GEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA  248 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred             HHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence            999999999999999999999999998    433       246789999999999988754

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.94  E-value=8.5e-26  Score=174.44  Aligned_cols=207  Identities=17%  Similarity=0.189  Sum_probs=141.5

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH--HH-HHH---HHHHh-------hccchhh--------
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV--SE-FNR---VLYKN-------YGTSMAG--------   62 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~-~~~---~~~~~-------~~~~~~~--------   62 (238)
                      +|+|+||+||||+++...+...+.+     ++++.|++....  .. +..   .....       .|.....        
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   75 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ   75 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence            5899999999999976666555553     556677653221  11 111   01110       0111110        


Q ss_pred             -hhhccCCCChHhH----HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeee
Q 035566           63 -LKAVGYDFDNDDY----HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVN  134 (238)
Q Consensus        63 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~  134 (238)
                       +...+. .+.+.+    ...+........+.++||+.++|+.++.+   .+++||+.. .+...++.+|+..+|+.+++
T Consensus        76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~  153 (263)
T 3k1z_A           76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLT  153 (263)
T ss_dssp             HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEE
T ss_pred             HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEe
Confidence             001111 122221    12222222223457899999999888644   579999776 46889999999999999999


Q ss_pred             cccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-C------ccccccccChh
Q 035566          135 FESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-T------KGADYALENIH  205 (238)
Q Consensus       135 ~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-~------~~ad~v~~~~~  205 (238)
                      ++..+..||    .+.++. +++++|++|++|++|||+. +|+.+|+.+|+.+++++++.. .      ..|+++++++.
T Consensus       154 ~~~~~~~Kp----~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~  229 (263)
T 3k1z_A          154 SEAAGWPKP----DPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLA  229 (263)
T ss_dssp             HHHHSSCTT----SHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGG
T ss_pred             ecccCCCCC----CHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHH
Confidence            988887776    666666 5899999999999999997 999999999999999998864 2      26999999999


Q ss_pred             HHHHHhHHhhhccccc
Q 035566          206 NIREAFPELWDADEIS  221 (238)
Q Consensus       206 el~~~l~~~~~~~~~~  221 (238)
                      ||.+++.++.++....
T Consensus       230 el~~~l~~~~~~~~~~  245 (263)
T 3k1z_A          230 HLLPALDCLEGSAENL  245 (263)
T ss_dssp             GHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHhcCCCC
Confidence            9999998887665443

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.94  E-value=1.9e-25  Score=169.08  Aligned_cols=126  Identities=17%  Similarity=0.261  Sum_probs=104.4

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ..++|++.++|+.++.+   .+++||++...+...++.+|+..+|+.+++++..+..||    .+..+. +++++|++|+
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~~~~~~  169 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKP----DNRVYELAEQALGLDRS  169 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTT----SHHHHHHHHHHHTSCGG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCC----CHHHHHHHHHHcCCCcc
Confidence            56789999999888643   679999999999999999999999999999888887776    566555 5899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHhHHhhhc
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAFPELWDA  217 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l~~~~~~  217 (238)
                      ++++|||+.+|+.+|+.+|+.+++++++..     ...++++++++.|+.+++.+...+
T Consensus       170 ~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~  228 (232)
T 1zrn_A          170 AILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETAAGK  228 (232)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC------
T ss_pred             cEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhhccc
Confidence            999999999999999999999999987642     356899999999998887654433

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.94  E-value=1.3e-26  Score=175.53  Aligned_cols=125  Identities=17%  Similarity=0.271  Sum_probs=108.4

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      ..++|++.++|+.++..  .+++||+....+...++.+|+..+|+.+++++..+..||    .+.++. +++++|++|++
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~~~~~~~~  174 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKP----HPRIFELALKKAGVKGEE  174 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTT----SHHHHHHHHHHHTCCGGG
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCc----CHHHHHHHHHHcCCCchh
Confidence            56789999999888754  579999999999999999999999999999988877776    555555 58999999999


Q ss_pred             EEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHHhhh
Q 035566          165 RLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPELWD  216 (238)
Q Consensus       165 ~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~~~~  216 (238)
                      +++|||+. ||+.||+.+|+++++++++..    ...|+++++++.||.+++.++.+
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~  231 (234)
T 3u26_A          175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELNG  231 (234)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC-
T ss_pred             EEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHhh
Confidence            99999998 999999999999999988753    34799999999999999887654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.94  E-value=1.4e-25  Score=171.97  Aligned_cols=196  Identities=16%  Similarity=0.240  Sum_probs=134.5

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccc---------------------h
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTS---------------------M   60 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------------------~   60 (238)
                      |++|+|+||+||||+++...+...+.+     +.++.|++......... +.......                     .
T Consensus        20 m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (254)
T 3umc_A           20 QGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELTDR-WRQQYKPAMDRVRNGQAPWQHLDQLHRQSL   93 (254)
T ss_dssp             SSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHHHH-HHHHTHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred             cCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHHHH-HHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence            568999999999999966656555554     44556765432211111 00000000                     0


Q ss_pred             hh-hhhccCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeeccc
Q 035566           61 AG-LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES  137 (238)
Q Consensus        61 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~  137 (238)
                      .. +...+........... ...  .....++|++.++|+.++..  .+++||+....+...++.+|+.  |+.+++++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~  168 (254)
T 3umc_A           94 EALAGEFGLALDEALLQRI-TGF--WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADL  168 (254)
T ss_dssp             HHHHHHTTCCCCHHHHHHH-HGG--GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHH
T ss_pred             HHHHHHhCCCCCHHHHHHH-HHH--HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecc
Confidence            00 0111111222211111 111  13357789999999888754  6799999999999999999986  999998888


Q ss_pred             CCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec----CCC-------CCccccccccChh
Q 035566          138 LNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG----TSR-------RTKGADYALENIH  205 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~----~~~-------~~~~ad~v~~~~~  205 (238)
                      .+..||    ++.+++ +++++|++|+++++|||+.+|+.||+.+|+.+++++    ++.       .+..||++++++.
T Consensus       169 ~~~~kp----~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~  244 (254)
T 3umc_A          169 FGHYKP----DPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLL  244 (254)
T ss_dssp             HTCCTT----SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHH
T ss_pred             cccCCC----CHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHH
Confidence            877776    555555 589999999999999999999999999999999998    443       1457899999999


Q ss_pred             HHHHHhH
Q 035566          206 NIREAFP  212 (238)
Q Consensus       206 el~~~l~  212 (238)
                      ||.++|.
T Consensus       245 el~~~l~  251 (254)
T 3umc_A          245 DLHRQLA  251 (254)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9988764

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.93  E-value=5.3e-26  Score=173.60  Aligned_cols=197  Identities=16%  Similarity=0.219  Sum_probs=135.0

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hh----ccCCCCh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KA----VGYDFDN   72 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~   72 (238)
                      .++|+|+||+||||+++...+..++.+     +++.+|++......+..    ..+......     ..    .+.....
T Consensus        21 ~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~   91 (243)
T 2hsz_A           21 TQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVMT----WIGNGADVLSQRAVDWACKQAEKELTE   91 (243)
T ss_dssp             SSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHHH----HCSSCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             ccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHHHH----HhCchHHHHHHHHhhhhhccccccCCH
Confidence            468999999999999975555555543     45556765322111111    111110000     00    0111222


Q ss_pred             H-------hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCC
Q 035566           73 D-------DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTN  142 (238)
Q Consensus        73 ~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k  142 (238)
                      +       .+.+.+.... .....++||+.++|+.++.+   .+++||+....+..+++.+|+..+|+.+++++.....|
T Consensus        92 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~K  170 (243)
T 2hsz_A           92 DEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIK  170 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCT
T ss_pred             HHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCC
Confidence            1       1222222211 13457889999999888644   57999999999999999999999999999888777777


Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      |   +...+..+++++|++|+++++|||+.+|+.+|+.+|+.++++.++..      ...++++++++.||.+++
T Consensus       171 p---~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l  242 (243)
T 2hsz_A          171 P---HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  242 (243)
T ss_dssp             T---SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             c---CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence            6   33344446899999999999999999999999999999999987632      456899999999987654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.93  E-value=6e-26  Score=168.23  Aligned_cols=192  Identities=15%  Similarity=0.185  Sum_probs=132.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhc-cchhhhhh-c--cCCCCh---HhH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYG-TSMAGLKA-V--GYDFDN---DDY   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~---~~~   75 (238)
                      ++|+|+||+||||+++...+...+.+     ..+++|+..... .+.    ...| ........ .  ....+.   ..+
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~-~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKE-KVR----EFIFKYSVQDLLVRVAEDRNLDVEVLNQV   72 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHH-HHH----HHHHHSCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHH-----HHHHcCCCCCHH-HHH----HHHccccHHHHHHHhhchhhccHHHHHHH
Confidence            47999999999999976655555554     334455543221 111    1112 11111100 0  001111   112


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      .......+ .....++|++.++|+.++..   .+++|++...... .++.+++..+|+.+++++..+..||   ....+.
T Consensus        73 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp---~~~~~~  147 (207)
T 2go7_A           73 RAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKP---SPEAAT  147 (207)
T ss_dssp             HHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTT---SSHHHH
T ss_pred             HHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCC---CcHHHH
Confidence            22222222 24456789999999888643   5789999888888 8999999999999998887777775   334444


Q ss_pred             HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHh
Q 035566          153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAF  211 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l  211 (238)
                      .+++++|++|+++++|||+.||+.||+.+|+.+++++++. . .|+++++++.||.+++
T Consensus       148 ~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-~a~~v~~~~~el~~~l  204 (207)
T 2go7_A          148 YLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-EGNHRIQALADISRIF  204 (207)
T ss_dssp             HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-TTEEECSSTTHHHHHT
T ss_pred             HHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-CCCEEeCCHHHHHHHH
Confidence            5689999999999999999999999999999999998887 4 8999999999998766

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.93  E-value=1.4e-25  Score=171.00  Aligned_cols=122  Identities=20%  Similarity=0.312  Sum_probs=105.1

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ..++|++.++|+.++.   +.+++||+....+...++.+|+..+|+.+++++..+..||    .+.++. +++++|++|+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~g~~~~  168 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKP----HPKIFKKALKAFNVKPE  168 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----CHHHHHHHHHHHTCCGG
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCC----CHHHHHHHHHHcCCCcc
Confidence            5678999999988864   4679999999999999999999999999999888887776    555555 5899999999


Q ss_pred             eEEEEeCCc-cchhHHHhcCCeEEEecCCCC----C---ccccccccChhHHHHHhHH
Q 035566          164 QRLFFDDST-RNIECGKSIGLHTVLVGTSRR----T---KGADYALENIHNIREAFPE  213 (238)
Q Consensus       164 ~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~---~~ad~v~~~~~el~~~l~~  213 (238)
                      +|++|||+. ||+.+|+.+|+.++++.++..    .   ..++++++++.||.+++.+
T Consensus       169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~  226 (241)
T 2hoq_A          169 EALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLAR  226 (241)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHH
T ss_pred             cEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHH
Confidence            999999998 999999999999999977652    2   2789999999999887754

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.93  E-value=2e-26  Score=174.48  Aligned_cols=191  Identities=18%  Similarity=0.184  Sum_probs=117.9

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh----h-hccC--CCChHh-
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL----K-AVGY--DFDNDD-   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~--~~~~~~-   74 (238)
                      ++|+|+||+||||+++...+...+.+     +.++.|++....     .+....|......    . ..+.  ..+.+. 
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKH-----IAEQIDIPFDRD-----MNERLKGISREESLESILIFGGAETKYTNAEK   70 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence            47899999999999976655555554     445567663321     1111112211111    0 0011  122211 


Q ss_pred             ------HHHhhhCCC-CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCC
Q 035566           75 ------YHSFVHGRL-PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKT  144 (238)
Q Consensus        75 ------~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~  144 (238)
                            +...+...+ ......++||+.++|+.++..   .+++||+..  ....++.+|+..+|+.+++++.....|| 
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp-  147 (233)
T 3nas_A           71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKP-  147 (233)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred             HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCC-
Confidence                  111111111 011234789999999888644   578888754  7788999999999999999888777776 


Q ss_pred             CCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHH
Q 035566          145 TGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIR  208 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~  208 (238)
                        +...+..+++++|++|++|++|||+.+|+.||+.+|+.++++++......|+++++++.|+.
T Consensus       148 --~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el~  209 (233)
T 3nas_A          148 --DPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLT  209 (233)
T ss_dssp             ---CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-------CSEECSSGGGCC
T ss_pred             --ChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccccCCEEeCChHhCC
Confidence              33344456899999999999999999999999999999999988776559999999999964

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.93  E-value=1.6e-25  Score=169.47  Aligned_cols=201  Identities=17%  Similarity=0.187  Sum_probs=133.2

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhH-H--------HHHHHHHHHhhccchh----hhhhccCC
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESE-V--------SEFNRVLYKNYGTSMA----GLKAVGYD   69 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~--------~~~~~~~~~~~~~~~~----~~~~~~~~   69 (238)
                      ++|+|+||+||||+++...+...+.+.+.+    ..|.+... .        ......+...++....    .....   
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   75 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIE----VYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKA---   75 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHH----HHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHH---
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHH----HhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHH---
Confidence            489999999999999766666665543322    14443321 0        0001111122221110    00000   


Q ss_pred             CChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           70 FDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                        ...+...+..........++|++.++|+.++.+    .+++||+....+...++.+|+..+|+.++++......   +
T Consensus        76 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---~  150 (234)
T 2hcf_A           76 --KETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR---N  150 (234)
T ss_dssp             --HHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG---G
T ss_pred             --HHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCc---c
Confidence              011222222112113356789999999988655    4699999999999999999999999976665544321   1


Q ss_pred             CchHHHHH-HHHhcC--CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          146 GQELQLIS-MLRMVA--HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~--~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      ++.+.++. +++++|  ++|++|++|||+.+|+.+|+.+|+.++++.++..      ...|++++.++.||.+++.++.
T Consensus       151 k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~  229 (234)
T 2hcf_A          151 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL  229 (234)
T ss_dssp             GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHh
Confidence            24566555 589999  9999999999999999999999999999988753      2348999999999999887765

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.93  E-value=1.2e-25  Score=169.09  Aligned_cols=200  Identities=16%  Similarity=0.143  Sum_probs=126.5

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccc------------hhhh-hhccC
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTS------------MAGL-KAVGY   68 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~   68 (238)
                      |++|+|+||+||||+++...+..++.+     .+.+.|++.... .+...+....|..            ...+ ...+.
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~   74 (220)
T 2zg6_A            1 MKYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLR-KVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGI   74 (220)
T ss_dssp             CCCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCHH-HHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTC
T ss_pred             CCceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCHH-HHHHHHHHHhhhccCCCccccccccHHHHHHHcCC
Confidence            358999999999999976666555553     445667654321 1222222222221            1111 11222


Q ss_pred             CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                      ....+................++||+.++|+.++.+   .+++||++. .+...++++|+..+|+.+++++..+..||  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp--  151 (220)
T 2zg6_A           75 YPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKP--  151 (220)
T ss_dssp             CCCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC------------
T ss_pred             CCcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCC--
Confidence            222222222222211223457899999999988754   578898865 57889999999999999999888887776  


Q ss_pred             CchHHHHH-HHHhcCCCCCeEEEEeCCcc-chhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566          146 GQELQLIS-MLRMVAHHFFQRLFFDDSTR-NIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~~~~~~~v~vgD~~~-di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                        .+.++. +++++|++|   ++|||+.+ |+.+|+.+|+.++++.++......+++++++.||.+++.+++
T Consensus       152 --~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          152 --NPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             ---CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHHC
T ss_pred             --CHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHHHhc
Confidence              555555 589999987   99999999 999999999999999765332222678999999988887654

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.93  E-value=1.2e-24  Score=165.50  Aligned_cols=123  Identities=12%  Similarity=0.169  Sum_probs=105.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ..++|++.++|+.++.+   .+++||++...+...++.+|+..+|+.+++++..+..||    ++..+. +++++|++|+
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~~~~~~  179 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKP----DPRIYQFACDRLGVNPN  179 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTT----SHHHHHHHHHHHTCCGG
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCC----CHHHHHHHHHHcCCCcc
Confidence            57889999999888643   679999999999999999999999999999988887776    556555 5899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC----Cccc-cccccChhHHHHHhHHh
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGA-DYALENIHNIREAFPEL  214 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~a-d~v~~~~~el~~~l~~~  214 (238)
                      ++++|||+.+|+.+|+.+|+.++++.++..    ...+ +++++++.||.+++.++
T Consensus       180 ~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  235 (240)
T 2no4_A          180 EVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKN  235 (240)
T ss_dssp             GEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC-
T ss_pred             cEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHh
Confidence            999999999999999999999999987653    3457 99999999998877544

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.93  E-value=3.6e-25  Score=167.19  Aligned_cols=118  Identities=17%  Similarity=0.229  Sum_probs=100.9

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~  163 (238)
                      ...++|++.++|+.++.+  .+++||++..     ++.+|+..+|+.+++++..+..||    ++.++. +++++|++|+
T Consensus       103 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~~~~~~~  173 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKP----DPAPFLEALRRAKVDAS  173 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTT----SHHHHHHHHHHHTCCGG
T ss_pred             cCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCc----CHHHHHHHHHHhCCCch
Confidence            467889999999887644  6789998764     788899999999999988888776    555555 5899999999


Q ss_pred             eEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHH
Q 035566          164 QRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       164 ~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~  213 (238)
                      ++++|||+. +|+.+|+.+|+.+++++++..    ...++++++++.||.+++.+
T Consensus       174 ~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~  228 (230)
T 3vay_A          174 AAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR  228 (230)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred             heEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence            999999998 999999999999999988764    45789999999999988765

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.93  E-value=4.8e-25  Score=170.34  Aligned_cols=125  Identities=13%  Similarity=0.131  Sum_probs=103.1

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      ...++|++.++|+.++.   +.+++|++....+...++.+|+..+| +.+++++.....||   +...+..+++++|++|
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp---~~~~~~~~~~~lgi~~  177 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRP---YPWMCYKNAMELGVYP  177 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTT---SSHHHHHHHHHHTCCS
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCC---CHHHHHHHHHHhCCCC
Confidence            35678999998887753   35789999888888899998888886 88888877776665   4445555699999999


Q ss_pred             -CeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHHhH
Q 035566          163 -FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREAFP  212 (238)
Q Consensus       163 -~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~l~  212 (238)
                       +++++|||+.||+.||+.+|+.+++++++..                             ...||++++++.||.+++.
T Consensus       178 ~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~  257 (267)
T 1swv_A          178 MNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVME  257 (267)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHH
T ss_pred             CcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHH
Confidence             9999999999999999999999999987753                             2359999999999998876


Q ss_pred             Hh
Q 035566          213 EL  214 (238)
Q Consensus       213 ~~  214 (238)
                      .+
T Consensus       258 ~~  259 (267)
T 1swv_A          258 HI  259 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=1.1e-24  Score=164.44  Aligned_cols=200  Identities=17%  Similarity=0.190  Sum_probs=128.5

Q ss_pred             CCc-eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHH---Hhhccchhh---------hhhcc
Q 035566            1 MTK-YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLY---KNYGTSMAG---------LKAVG   67 (238)
Q Consensus         1 M~~-~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~   67 (238)
                      |++ +|+|+||+||||+++...+...+...+..  +...|........+.....   ...+.....         ....+
T Consensus         4 M~~mik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (234)
T 3ddh_A            4 MKELIKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISN   81 (234)
T ss_dssp             CTTTCCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTT
T ss_pred             hhhcccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhc
Confidence            555 89999999999999766555554432222  2334422212111111000   111111111         11112


Q ss_pred             CCCChHh---HHHhhhCCCCCCCCCCChhHHHHHhcCCC----CeEEEecCChHHHHHHHHhcCcccccceeeecccCCC
Q 035566           68 YDFDNDD---YHSFVHGRLPYENLKPDPVLRNLLLSLPI----RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP  140 (238)
Q Consensus        68 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~  140 (238)
                      ...+.+.   +.+.+.+.. .....++|++.++|+.++.    +.+++||+....+...++.+|+..+|+.++++.    
T Consensus        82 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~----  156 (234)
T 3ddh_A           82 GKIAADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS----  156 (234)
T ss_dssp             TCCCHHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES----
T ss_pred             CCCCHHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC----
Confidence            2233222   222222212 2456789999999988854    467999999989999999999999999988643    


Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCC----C----Cc-cccccccChhHHHHH
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSR----R----TK-GADYALENIHNIREA  210 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~----~----~~-~ad~v~~~~~el~~~  210 (238)
                       ||   +...+..+++++|++|+++++|||+. +|+.||+.+|+.++++.++.    .    .. .++++++++.||.++
T Consensus       157 -kp---k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~  232 (234)
T 3ddh_A          157 -DK---TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL  232 (234)
T ss_dssp             -CC---SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred             -CC---CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence             33   33444446999999999999999997 99999999999999994432    2    22 349999999999876


Q ss_pred             h
Q 035566          211 F  211 (238)
Q Consensus       211 l  211 (238)
                      +
T Consensus       233 l  233 (234)
T 3ddh_A          233 L  233 (234)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.92  E-value=2.3e-25  Score=167.43  Aligned_cols=200  Identities=19%  Similarity=0.155  Sum_probs=130.4

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccC-CCChH-------h
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGY-DFDND-------D   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~   74 (238)
                      ++|+|+||+||||+++...+...+.+     ..++.|........    +....|........... .....       .
T Consensus         5 ~~k~v~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   75 (225)
T 3d6j_A            5 KYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTGITDDM----IKRTIGKTLEESFSILTGITDADQLESFRQE   75 (225)
T ss_dssp             CCSEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHH----HHTTTTSCHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCCcHHHHHHHHcCCCCHHHHHHHHHH
Confidence            47999999999999976655555553     34455654322111    11112222211111000 00111       1


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL  151 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~  151 (238)
                      +...+...+ .....++|++.++++.++.   +.+++|++........++.+++..+|+.+++++.....||   +...+
T Consensus        76 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~---~~~~~  151 (225)
T 3d6j_A           76 YSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKP---DPEGL  151 (225)
T ss_dssp             HHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTT---STHHH
T ss_pred             HHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCC---ChHHH
Confidence            111111111 1235667899999887753   3678999998899999999999999999988877766665   33445


Q ss_pred             HHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      ..+++++|++++++++|||+.||+.|++.+|+.++++.++..      ...|+++++++.||.+++..+.
T Consensus       152 ~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~  221 (225)
T 3d6j_A          152 LLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKS  221 (225)
T ss_dssp             HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-------
T ss_pred             HHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhc
Confidence            556899999999999999999999999999999999877643      2248999999999988776543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.92  E-value=2.2e-24  Score=165.31  Aligned_cols=201  Identities=14%  Similarity=0.114  Sum_probs=131.8

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCCh--hHHHHHHHH-H--HHhhccchhhhh---------hccC
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEE--SEVSEFNRV-L--YKNYGTSMAGLK---------AVGY   68 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~-~--~~~~~~~~~~~~---------~~~~   68 (238)
                      ++|+|+||+||||+++...+...+.+.+..  +...|+..  .....+... +  +...|.....+.         ..+.
T Consensus        12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   89 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA   89 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred             ceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence            479999999999999766666665543332  24566654  111111000 0  011232221111         1111


Q ss_pred             CCChH---hHHHhhhCCCCCCCCCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC
Q 035566           69 DFDND---DYHSFVHGRLPYENLKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK  143 (238)
Q Consensus        69 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~  143 (238)
                      ....+   .+.+.+.... .....++|++.++|+.++  .+.+++||+....+...++.+|+..+|+.++++     .||
T Consensus        90 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-----~kp  163 (251)
T 2pke_A           90 RIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-----SEK  163 (251)
T ss_dssp             CCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-----SCC
T ss_pred             CCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-----CCC
Confidence            12211   1222122111 244678899999998886  235799999999999999999999999988764     233


Q ss_pred             CCCchHHHHH-HHHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----------Cccccc-cccChhHHHHH
Q 035566          144 TTGQELQLIS-MLRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----------TKGADY-ALENIHNIREA  210 (238)
Q Consensus       144 ~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----------~~~ad~-v~~~~~el~~~  210 (238)
                          .+..+. +++++|++|++|++|||+. ||+.+|+.+|+.++++.++..          ...+++ +++++.||.++
T Consensus       164 ----~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~  239 (251)
T 2pke_A          164 ----DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA  239 (251)
T ss_dssp             ----SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHH
T ss_pred             ----CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHH
Confidence                455555 5899999999999999999 999999999999999976542          246887 89999999988


Q ss_pred             hHHhh
Q 035566          211 FPELW  215 (238)
Q Consensus       211 l~~~~  215 (238)
                      +..+.
T Consensus       240 l~~~~  244 (251)
T 2pke_A          240 VRALD  244 (251)
T ss_dssp             HHHHH
T ss_pred             HHHhC
Confidence            87654

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.92  E-value=1e-24  Score=163.94  Aligned_cols=119  Identities=15%  Similarity=0.149  Sum_probs=100.5

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      ..++|++.++|+.++.   +.+++|++....+...++.+++..+|+.+++++..+..||   +...+..+++++|+++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp---~~~~~~~~~~~~~i~~~~  169 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKP---HPQVYLDCAAKLGVDPLT  169 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTT---STHHHHHHHHHHTSCGGG
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCC---ChHHHHHHHHHcCCCHHH
Confidence            5677899988887753   3678999998889999999999999999998887777775   344455568999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHH
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIRE  209 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~  209 (238)
                      +++|||+.||+.|++.+|+.+++++++..     +..|++++.++.||.+
T Consensus       170 ~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~  219 (226)
T 1te2_A          170 CVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA  219 (226)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred             eEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence            99999999999999999999999877652     5679999999999755

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.92  E-value=3.6e-23  Score=158.76  Aligned_cols=125  Identities=16%  Similarity=0.282  Sum_probs=107.7

Q ss_pred             CCCCChhHHHHHhcCC-CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           87 NLKPDPVLRNLLLSLP-IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      ...++|++.++|+.++ .+.+++||++...+...++++|+..+|+.+++++..+..||    ++..+. +++++|++|++
T Consensus        91 ~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~~~~~~~  166 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKP----HPDSYALVEEVLGVTPAE  166 (253)
T ss_dssp             SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----SHHHHHHHHHHHCCCGGG
T ss_pred             cCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCC----CHHHHHHHHHHcCCCHHH
Confidence            3578899999999886 33679999999999999999999999999999988887776    555555 58999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecC-----------------------CC-----CCccccccccChhHHHHHhHHhh
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGT-----------------------SR-----RTKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~-----------------------~~-----~~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      |++|||+.+|+.+|+.+|+.++++++                       +.     ....++++++++.||.+++.++.
T Consensus       167 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  245 (253)
T 1qq5_A          167 VLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA  245 (253)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred             EEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhc
Confidence            99999999999999999999999987                       21     14579999999999999887654

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.92  E-value=8.1e-24  Score=156.80  Aligned_cols=119  Identities=17%  Similarity=0.232  Sum_probs=101.4

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      ..++||+.+ |+.++  .+.+++||++...+...++++|+..+|+.+++++..+..||    .+.++. +++++|  |++
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~~--~~~  145 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKP----SPKVYKYFLDSIG--AKE  145 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----CHHHHHHHHHHHT--CSC
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCC----CHHHHHHHHHhcC--CCc
Confidence            567888888 87765  45789999999999999999999999999999888887776    556555 589999  899


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHhHH
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l~~  213 (238)
                      +++|||+.+|+.+|+.+|+.+++++++..     ...++++++++.||.+++.+
T Consensus       146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~  199 (201)
T 2w43_A          146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR  199 (201)
T ss_dssp             CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred             EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence            99999999999999999999999987542     34689999999999887754

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.91  E-value=2.8e-24  Score=165.67  Aligned_cols=116  Identities=11%  Similarity=0.082  Sum_probs=97.1

Q ss_pred             CCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhc---CcccccceeeecccCCCCCCCCCchHHHHHH-HHhc
Q 035566           86 ENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMV  158 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~  158 (238)
                      ....++||+.++|+.|+.   +.+|+||++...+..+++++   |+..+|+.++++ +.+ .||    .+.+|.. ++++
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP----~p~~~~~~~~~l  200 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKV----ESESYRKIADSI  200 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTT----CHHHHHHHHHHH
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCC----CHHHHHHHHHHh
Confidence            346789999999998864   46799999998888888854   599999999888 676 665    7777775 8999


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCC------ccccccccChhHH
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRT------KGADYALENIHNI  207 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~------~~ad~v~~~~~el  207 (238)
                      |++|++|++|||+.+|+.+|+++|+.+|++.++...      ..++++++++.||
T Consensus       201 g~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el  255 (261)
T 1yns_A          201 GCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  255 (261)
T ss_dssp             TSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             CcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence            999999999999999999999999999999765421      3578888888876

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.91  E-value=1.6e-23  Score=154.94  Aligned_cols=175  Identities=17%  Similarity=0.298  Sum_probs=122.6

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhh--c-cchhhh-hh----ccCCCChHh
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNY--G-TSMAGL-KA----VGYDFDNDD   74 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~-~~~~~~-~~----~~~~~~~~~   74 (238)
                      ++|+|+||+||||+++. .....+.     ...+.+|++..............+  + ...... ..    .+.....+.
T Consensus         3 ~~k~viFDlDGTL~d~~-~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNG-WDREQRA-----DVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED   76 (200)
T ss_dssp             CCCEEEECCBTTTBCCS-SCHHHHH-----HHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH
T ss_pred             CceEEEEeCCCeeECCC-cchHHHH-----HHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH
Confidence            58999999999999964 3333333     255667776554333222222111  1 111111 11    011122333


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      +.+.+.     ....++|++.++|+.++.+  .+++||++...+...++.+|+..+|+.+++++..+..||    .+.++
T Consensus        77 ~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp----~~~~~  147 (200)
T 3cnh_A           77 FRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKP----NPAMY  147 (200)
T ss_dssp             HHHHHH-----HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTT----CHHHH
T ss_pred             HHHHHH-----hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCC----CHHHH
Confidence            433322     2245889999999888654  679999999999999999999999999999888877776    55666


Q ss_pred             H-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          153 S-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       153 ~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      . +++++|++|+++++|||+.+|+.+|+.+|+.+++++++.
T Consensus       148 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~  188 (200)
T 3cnh_A          148 RLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA  188 (200)
T ss_dssp             HHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred             HHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence            5 589999999999999999999999999999999998754

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.91  E-value=2.9e-24  Score=161.09  Aligned_cols=115  Identities=17%  Similarity=0.157  Sum_probs=94.6

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      ..++|++.++|+.++.   +.+++|++  ......++.+++..+|+.+++++..+..||   ....+..+++++|++|++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp---~~~~~~~~~~~lgi~~~~  164 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKP---APDIFIAAAHAVGVAPSE  164 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTT---SSHHHHHHHHHTTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCC---ChHHHHHHHHHcCCChhH
Confidence            4677999999888754   35688887  456778889999999999998888877776   333444468999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHH
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNI  207 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el  207 (238)
                      |++|||+.||++||+.+|+.+++++.......|++++.++.|+
T Consensus       165 ~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~el  207 (221)
T 2wf7_A          165 SIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHY  207 (221)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGC
T ss_pred             eEEEeCCHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHhC
Confidence            9999999999999999999999997654433899999999995

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.90  E-value=5.6e-23  Score=157.25  Aligned_cols=115  Identities=15%  Similarity=0.196  Sum_probs=91.8

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhc--C---------cccccceeeecccCCCCCCCCCchHHHHHH-
Q 035566           87 NLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKL--G---------LEDCFDGIVNFESLNPTNKTTGQELQLISM-  154 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~--~---------~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-  154 (238)
                      ..+++||+.++|+. +.+.+|+||++...+...+++.  |         +..+|+.++.+...+ .|    |.+.+|.. 
T Consensus       123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g-~K----P~p~~~~~a  196 (253)
T 2g80_A          123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-KK----TETQSYANI  196 (253)
T ss_dssp             CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC-CT----TCHHHHHHH
T ss_pred             cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC-CC----CCHHHHHHH
Confidence            46789999999999 7789999999999999888876  4         666677666442112 24    47887775 


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHH
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNI  207 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el  207 (238)
                      ++++|++|++|++|||+.+|+.+|+++|+.++++++...    ...++.+++++.||
T Consensus       197 ~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  253 (253)
T 2g80_A          197 LRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  253 (253)
T ss_dssp             HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             HHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence            899999999999999999999999999999999977432    12267888888764

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.5e-23  Score=162.88  Aligned_cols=190  Identities=16%  Similarity=0.131  Sum_probs=126.5

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHhhccchhhhhh-c-cCCCCh---HhHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLG-IEESEVSEFNRVLYKNYGTSMAGLKA-V-GYDFDN---DDYH   76 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~---~~~~   76 (238)
                      ++|+|+||+||||+++...+...+.+     +.+++| .+....      +....|........ . ......   ..+.
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~~------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  102 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEHV------IHISHGWRTYDAIAKFAPDFADEEYVNKLE  102 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHHH------HHHCTTCCHHHHHHHHCGGGCCHHHHHHHH
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHHH------HHHhcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence            37999999999999976555555443     344455 332111      11111221111110 0 000111   1111


Q ss_pred             HhhhCCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           77 SFVHGRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      ..+.... .....++|++.++|+.++..    .+++|++....+...++.+++. .|+.+++++.....||   +...+.
T Consensus       103 ~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp---~~~~~~  177 (275)
T 2qlt_A          103 GEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKP---HPEPYL  177 (275)
T ss_dssp             HTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTT---SSHHHH
T ss_pred             HHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCC---ChHHHH
Confidence            1111111 13456789999999888654    5799999999999999999886 4888888887766665   334444


Q ss_pred             HHHHhcCC-------CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHH
Q 035566          153 SMLRMVAH-------HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIR  208 (238)
Q Consensus       153 ~~~~~~~~-------~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~  208 (238)
                      .+++++|+       +|++|++|||+.||++||+.+|+.++++.++..     ...|+++++++.||.
T Consensus       178 ~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~  245 (275)
T 2qlt_A          178 KGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR  245 (275)
T ss_dssp             HHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred             HHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence            46899999       999999999999999999999999999988753     346899999999874

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.90  E-value=3.6e-23  Score=151.99  Aligned_cols=122  Identities=15%  Similarity=0.240  Sum_probs=104.0

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCCh---HHHHHHHHhcCcccccceeeecccC----CCCCCCCCchHHHHHH-H
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADE---IHVAKVLRKLGLEDCFDGIVNFESL----NPTNKTTGQELQLISM-L  155 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~---~~~~~~l~~~~~~~~f~~i~~~~~~----~~~k~~~~~~~~~~~~-~  155 (238)
                      .++++||+.++|+.|+.+   .+|+||++.   ..+...++.+|+..+|+.+++++..    +..||    .+.++.. +
T Consensus        32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP----~p~~~~~~~  107 (189)
T 3ib6_A           32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKP----DKTIFDFTL  107 (189)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTT----SHHHHHHHH
T ss_pred             CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCc----CHHHHHHHH
Confidence            367889999999988654   679999877   8899999999999999999988765    55565    6676664 8


Q ss_pred             HhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC--------Ccccccccc--ChhHHHHHhH
Q 035566          156 RMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR--------TKGADYALE--NIHNIREAFP  212 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~--~~~el~~~l~  212 (238)
                      +++|++|+++++|||+ .+|+.+|+++|+.++++.++..        ...++++++  ++.+|.+++.
T Consensus       108 ~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~  175 (189)
T 3ib6_A          108 NALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL  175 (189)
T ss_dssp             HHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred             HHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence            9999999999999999 7999999999999999987653        127899999  9999998763

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.90  E-value=1.2e-23  Score=155.27  Aligned_cols=122  Identities=11%  Similarity=0.079  Sum_probs=97.3

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCC-
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHF-  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~-  162 (238)
                      ..++||+.++|+.|+.   +.+|+||..........   +  .+|+.++++++....||    .+.++. +++++|+.+ 
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~KP----~p~~~~~a~~~l~~~~~  105 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAGWP----QPDACWMALMALNVSQL  105 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSCTT----STHHHHHHHHHTTCSCS
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCCCC----ChHHHHHHHHHcCCCCC
Confidence            5678999999998864   46899998877663333   3  46888988888877776    555554 589999975 


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHHhHH
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~l~~  213 (238)
                      ++|+||||+.+|+.+|+++|+.+|++.++..                             ..+++++++++.||.+++..
T Consensus       106 ~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~  185 (196)
T 2oda_A          106 EGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLAD  185 (196)
T ss_dssp             TTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHH
T ss_pred             ccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHH
Confidence            8999999999999999999999999988752                             13689999999999998877


Q ss_pred             hhhcc
Q 035566          214 LWDAD  218 (238)
Q Consensus       214 ~~~~~  218 (238)
                      +.++.
T Consensus       186 ~~~~~  190 (196)
T 2oda_A          186 IALRR  190 (196)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            65543

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.89  E-value=8.9e-23  Score=154.23  Aligned_cols=175  Identities=19%  Similarity=0.270  Sum_probs=119.4

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH--HHHH-HHHHHhh--c-cchhhh-----hhccCCCC
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV--SEFN-RVLYKNY--G-TSMAGL-----KAVGYDFD   71 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~-~~~~~~~--~-~~~~~~-----~~~~~~~~   71 (238)
                      ++++|+||+||||+++..   ..+.+     .++..|++....  ..+. ..++..+  | .....+     ...+...+
T Consensus        27 ~ik~viFD~DGTL~d~~~---~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   98 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLDR---ERCIE-----NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVS   98 (229)
T ss_dssp             CCCEEEECSBTTTBCBCH---HHHHH-----HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCC
T ss_pred             CCCEEEEeCCCeEEeCCh---HHHHH-----HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCC
Confidence            489999999999999542   22221     344566653221  0000 0011111  1 111111     11233444


Q ss_pred             hHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHH------HhcCcccccceeeecccCCCCCC
Q 035566           72 NDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVL------RKLGLEDCFDGIVNFESLNPTNK  143 (238)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l------~~~~~~~~f~~i~~~~~~~~~k~  143 (238)
                      .+.+.+.+....    ..++|++.++|+.++.+  .+++||++......++      +.+|+..+|+.+++++..+..||
T Consensus        99 ~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP  174 (229)
T 4dcc_A           99 DKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKP  174 (229)
T ss_dssp             HHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTT
T ss_pred             HHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCC
Confidence            555554444322    24679999999988754  6799999988888555      77889899999999988888886


Q ss_pred             CCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          144 TTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       144 ~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                          .+.+++ +++++|++|++|++|||+.+|+.+|+.+|+.+++++++..
T Consensus       175 ----~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~  221 (229)
T 4dcc_A          175 ----EPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED  221 (229)
T ss_dssp             ----CHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred             ----CHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence                666666 4899999999999999999999999999999999988763

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.89  E-value=2.2e-23  Score=157.92  Aligned_cols=197  Identities=21%  Similarity=0.187  Sum_probs=126.8

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHhhccch-h-hhhhc--c--CCCChHh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV-SEFNRVLYKNYGTSM-A-GLKAV--G--YDFDNDD   74 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~--~--~~~~~~~   74 (238)
                      .++|+|+||+||||+|+...+..++.+     +++++|++.... ......+....|... . .+...  .  .....+.
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   83 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAH-----MMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL   83 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence            457899999999999965555555543     344456443211 011112222223210 0 01000  0  0111112


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      +.+.+...  .....++||+.++|+.|+.  +.+|+||++...+...++++|+.++|+.++...   ..      ++.++
T Consensus        84 ~~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~---~~------K~~~~  152 (231)
T 2p11_A           84 MSSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY---IH------KELML  152 (231)
T ss_dssp             GHHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE---SS------GGGCH
T ss_pred             HHHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec---CC------hHHHH
Confidence            22222211  1346789999999988864  468999999999999999999999998765422   11      23455


Q ss_pred             HHHHhcCCCCCeEEEEeCCcc---chhHHHhcCCeEEEecCCC---C-----Cc-cccccccChhHHHHHhHHhh
Q 035566          153 SMLRMVAHHFFQRLFFDDSTR---NIECGKSIGLHTVLVGTSR---R-----TK-GADYALENIHNIREAFPELW  215 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~---di~~a~~~G~~~i~v~~~~---~-----~~-~ad~v~~~~~el~~~l~~~~  215 (238)
                      ..+.+ +++|++|++|||+.+   |+.+|+++|++++++.++.   .     .. .++++++++.||.+++.+++
T Consensus       153 ~~~~~-~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~~  226 (231)
T 2p11_A          153 DQVME-CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEWL  226 (231)
T ss_dssp             HHHHH-HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGGC
T ss_pred             HHHHh-cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHHH
Confidence            55444 789999999999999   8999999999999998873   1     12 48999999999988876654

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.89  E-value=4.8e-23  Score=154.21  Aligned_cols=111  Identities=14%  Similarity=0.149  Sum_probs=90.0

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc----------CCCCCCCCCchHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES----------LNPTNKTTGQELQLIS-  153 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~----------~~~~k~~~~~~~~~~~-  153 (238)
                      .+++|++.++|+.++.+   .+++||+....+...++.+|+..+|+.++..++          ....|    +++..++ 
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k----~k~~~~~~  149 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSH----SKGEMLLV  149 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTT----HHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCC----ChHHHHHH
Confidence            57889999999998766   469999999999999999999999988864432          22333    4666666 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccC
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALEN  203 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~  203 (238)
                      +++++|++|+++++|||+.+|+.+|+.+|+.+++ +.... +..||+++++
T Consensus       150 ~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~  199 (217)
T 3m1y_A          150 LQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINE  199 (217)
T ss_dssp             HHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECS
T ss_pred             HHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecc
Confidence            5899999999999999999999999999998776 43332 6779999875

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.88  E-value=1.5e-22  Score=148.42  Aligned_cols=173  Identities=16%  Similarity=0.172  Sum_probs=113.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc-cCCCC-hHhHHHhhh
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV-GYDFD-NDDYHSFVH   80 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~   80 (238)
                      ++|+|+||+||||+++...+...+.+     ..+++|++.... .+...+.   +.....+... ..... ...+...+.
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHD-SVYQALK---VSTPFAIETFAPNLENFLEKYKENEA   75 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-HHHHHHH---HCHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHH-HHHHHHc---cccHHHHHHHhhhHHHHHHHHHHHHH
Confidence            47999999999999965555555543     444567654321 1111110   1111111110 00000 112222222


Q ss_pred             CCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHh
Q 035566           81 GRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRM  157 (238)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~  157 (238)
                      .... . ..++|++.++|+.++.+   .+++||.+ ..+...++.+|+..+|+.+++++.....||   +...+..++++
T Consensus        76 ~~~~-~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp---~~~~~~~~~~~  149 (190)
T 2fi1_A           76 RELE-H-PILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKP---NPESMLYLREK  149 (190)
T ss_dssp             HHTT-S-CCBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCCCTT---SCHHHHHHHHH
T ss_pred             HhcC-c-CccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCCCCC---CHHHHHHHHHH
Confidence            2121 2 23889999999888543   57888876 467888999999999999998887777776   34444556899


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +|++  ++++|||+.+|+++|+.+|+.+++++++.
T Consensus       150 ~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  182 (190)
T 2fi1_A          150 YQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV  182 (190)
T ss_dssp             TTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             cCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence            9998  99999999999999999999999998754

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.88  E-value=7.7e-23  Score=152.50  Aligned_cols=101  Identities=17%  Similarity=0.204  Sum_probs=88.0

Q ss_pred             CCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHh------cCcccccceeeecccCCCCCCCCCchHHHHH-HHHhc
Q 035566           88 LKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRK------LGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMV  158 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~------~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~  158 (238)
                      ..++|++.++|+.++.  +.+++||++...+...++.      +|+..+|+.+++++..+..||    .+.++. +++++
T Consensus        88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~  163 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKP----NEDIFLEMIADS  163 (211)
T ss_dssp             EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTT----SHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCC----CHHHHHHHHHHh
Confidence            3578999999988864  3679999999888888888      899999999999888888876    566665 58999


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      |++|++|++|||+.+|+.+|+.+|+.+++++++.
T Consensus       164 ~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          164 GMKPEETLFIDDGPANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             CCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             CCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence            9999999999999999999999999999998764

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.88  E-value=1.8e-22  Score=146.91  Aligned_cols=119  Identities=15%  Similarity=0.123  Sum_probs=95.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccccceeee-----cccCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVN-----FESLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~-----~~~~~~~k~~  144 (238)
                      +.++||+.++|+.|+.+   .+|+||++.               ..+...++.+|  .+|+.++.     .+.....|| 
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP-  102 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKP-  102 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTT-
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCC-
Confidence            56789999999888654   579999876               56677888888  44555543     344555665 


Q ss_pred             CCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHhH
Q 035566          145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAFP  212 (238)
Q Consensus       145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l~  212 (238)
                         .+.++. +++++|++|+++++|||+.+|+.+|+.+|++++++.++..        ...|+++++++.||.+++.
T Consensus       103 ---~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~  176 (179)
T 3l8h_A          103 ---LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL  176 (179)
T ss_dssp             ---SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence               555555 5899999999999999999999999999999999998863        2678999999999988764

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.86  E-value=2.8e-21  Score=143.62  Aligned_cols=126  Identities=11%  Similarity=0.081  Sum_probs=94.8

Q ss_pred             CCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCC---CCCCCchHHHHHHHHhcCC
Q 035566           87 NLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPT---NKTTGQELQLISMLRMVAH  160 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~---k~~~~~~~~~~~~~~~~~~  160 (238)
                      ..+++||+.++|+.++.  +.+++||+....+...++++|+..+| +.+..+.+....   +|  + +......+++++.
T Consensus        67 ~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p--~-p~~~~~~l~~l~~  143 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLR--Q-KDPKRQSVIAFKS  143 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECC--S-SSHHHHHHHHHHH
T ss_pred             hcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecC--C-CchHHHHHHHHHh
Confidence            46789999999988864  46799999999999999999999999 455554443211   13  1 2333445788999


Q ss_pred             CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccc-ccChhHHHHHhHHhhh
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYA-LENIHNIREAFPELWD  216 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v-~~~~~el~~~l~~~~~  216 (238)
                      .|+++++|||+.+|+.+|+.+|+.+++ +....  ...++++ ++++.++.+++.++++
T Consensus       144 ~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  201 (206)
T 1rku_A          144 LYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASS  201 (206)
T ss_dssp             TTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCS
T ss_pred             cCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhccccchHHHHHHHHHHhc
Confidence            999999999999999999999998664 43322  2345665 8999999998877654

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.85  E-value=6.1e-22  Score=149.19  Aligned_cols=122  Identities=14%  Similarity=0.167  Sum_probs=89.3

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceee--------ecccCCCCCCCCCchHHHHH
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIV--------NFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~--------~~~~~~~~k~~~~~~~~~~~  153 (238)
                      ..+++||+.++|+.|+.+   .+|+||++...+..+++++|+.  .+|+.++        .+.+........++++.++.
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~  163 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK  163 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence            357889999999988644   6799999999999999999997  3776653        23222211111123445555


Q ss_pred             -HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566          154 -MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF  211 (238)
Q Consensus       154 -~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l  211 (238)
                       +++++|+  +++++|||+.+|+.+|+.+|+ +++++....    ...++++++++.|+.+++
T Consensus       164 ~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l  223 (225)
T 1nnl_A          164 LLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGEL  223 (225)
T ss_dssp             HHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred             HHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence             4788888  789999999999999999999 888865432    346899999999987654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.85  E-value=2.2e-22  Score=149.40  Aligned_cols=101  Identities=23%  Similarity=0.344  Sum_probs=85.0

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHh-cCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~  162 (238)
                      ..++|++.++|+.++.   +.+++||++.......++. +|+..+|+.+++++..+..||    .+.++. +++++|++|
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp----~~~~~~~~~~~~~~~~  165 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKP----EARIYQHVLQAEGFSP  165 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTT----CHHHHHHHHHHHTCCG
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCC----CHHHHHHHHHHcCCCH
Confidence            4678999999988863   3679999887776666666 788889999999888877776    566555 589999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +++++|||+.+|+.+|+.+|+++++++++.
T Consensus       166 ~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~  195 (206)
T 2b0c_A          166 SDTVFFDDNADNIEGANQLGITSILVKDKT  195 (206)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             HHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence            999999999999999999999999998765

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.85  E-value=2.3e-21  Score=144.76  Aligned_cols=120  Identities=14%  Similarity=0.188  Sum_probs=95.7

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCC---------------hHHHHHHHHhcCcccccceeeecc------------c
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNAD---------------EIHVAKVLRKLGLEDCFDGIVNFE------------S  137 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~---------------~~~~~~~l~~~~~~~~f~~i~~~~------------~  137 (238)
                      ..++||+.++|+.|+.+   .+++||+.               ...+...++.+|+.  |+.++.+.            .
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~  126 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV  126 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCcc
Confidence            46779999999888644   67999998               47788899999987  77765432            2


Q ss_pred             CCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC-----CccccccccChhHHHHH
Q 035566          138 LNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR-----TKGADYALENIHNIREA  210 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~-----~~~ad~v~~~~~el~~~  210 (238)
                      ....||    .+.++. +++++|++|+++++|||+.+|+.+|+++|+.+ +++.++..     ...++++++++.||.++
T Consensus       127 ~~~~KP----~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~  202 (211)
T 2gmw_A          127 CDCRKP----HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA  202 (211)
T ss_dssp             CSSSTT----SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred             CcCCCC----CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence            333444    556666 58999999999999999999999999999999 99988753     23589999999999887


Q ss_pred             hHH
Q 035566          211 FPE  213 (238)
Q Consensus       211 l~~  213 (238)
                      +.+
T Consensus       203 l~~  205 (211)
T 2gmw_A          203 IKK  205 (211)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            754

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.84  E-value=1.7e-21  Score=153.70  Aligned_cols=124  Identities=10%  Similarity=0.083  Sum_probs=90.8

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC------CCCCCCCchHHHHH-HHHh
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN------PTNKTTGQELQLIS-MLRM  157 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------~~k~~~~~~~~~~~-~~~~  157 (238)
                      ++++||+.++|+.++.+   .+|+||+....+..+++.+|+..+|+.++..++..      .....+++++.++. ++++
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            56889999999888644   67999999999999999999999998776533210      00011134666665 5899


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Cccccccc--cChhHHHHHhH
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYAL--ENIHNIREAFP  212 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~--~~~~el~~~l~  212 (238)
                      +|++|+++++|||+.+|+.+|+.+|+.+++ +.... ...++.++  +++.++..++.
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~  314 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE  314 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence            999999999999999999999999997666 43222 34455554  46666665543

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.83  E-value=7.7e-22  Score=150.39  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=61.0

Q ss_pred             cccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC-----C---c
Q 035566          125 LEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR-----T---K  195 (238)
Q Consensus       125 ~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~-----~---~  195 (238)
                      +..+|+.+.+.+.....||   +...+..+++++|++|++|++|||+ .||++|++.+|+.++++.++..     +   .
T Consensus       159 ~~~~~~~~~~~~~~~~~kp---k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~  235 (250)
T 2c4n_A          159 LCAGIEKISGRKPFYVGKP---SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPF  235 (250)
T ss_dssp             HHHHHHHHHCCCCEECSTT---STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSS
T ss_pred             HHHHHHHHhCCCceEeCCC---CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCC
Confidence            3334554444444444554   3445555699999999999999999 6999999999999999987652     1   4


Q ss_pred             cccccccChhHHH
Q 035566          196 GADYALENIHNIR  208 (238)
Q Consensus       196 ~ad~v~~~~~el~  208 (238)
                      .|+++++++.||.
T Consensus       236 ~~~~v~~~~~el~  248 (250)
T 2c4n_A          236 RPSWIYPSVAEID  248 (250)
T ss_dssp             CCSEEESSGGGCC
T ss_pred             CCCEEECCHHHhh
Confidence            6899999998864

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.83  E-value=1.8e-21  Score=147.79  Aligned_cols=127  Identities=13%  Similarity=0.092  Sum_probs=95.8

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCC--------CCCCCCchHH-HH--
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP--------TNKTTGQELQ-LI--  152 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~--------~k~~~~~~~~-~~--  152 (238)
                      ..+++||+.++|+.|+.   +.+|+||++...+..+++  |+..+ +.+++++....        .||    .+. ++  
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp----~p~~~~~~  147 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHS----CKGTCSNQ  147 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTC----CCTTCCSC
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCC----Cccccccc
Confidence            36789999999998863   578999999888888888  77665 77877765443        343    333 34  


Q ss_pred             ------HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cc-cccccccChhHHHHHhHHhhhcccc
Q 035566          153 ------SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TK-GADYALENIHNIREAFPELWDADEI  220 (238)
Q Consensus       153 ------~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~-~ad~v~~~~~el~~~l~~~~~~~~~  220 (238)
                            .++++++++|+++++|||+.+|+.+|+.+|+.++..+....  .. .+++++.++.||.+++..++...++
T Consensus       148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~  224 (236)
T 2fea_A          148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEW  224 (236)
T ss_dssp             CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHH
T ss_pred             cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHHHHhHHHHHh
Confidence                  56789999999999999999999999999998863211111  22 3889999999999988776444333

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.83  E-value=8.8e-22  Score=151.32  Aligned_cols=120  Identities=13%  Similarity=0.079  Sum_probs=90.8

Q ss_pred             CChhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcccccc---eeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566           90 PDPVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLEDCFD---GIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ  164 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~~f~---~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~  164 (238)
                      +++++.++++.++.. .+++||.+.......+...++..+|+   .+++++.....||    ++.++. +++++|++|++
T Consensus       123 ~~~~~~~~l~~l~~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp----~~~~~~~~~~~lgi~~~~  198 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKP----EKTFFLEALRDADCAPEE  198 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCEEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTT----SHHHHHHHGGGGTCCGGG
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCC----CHHHHHHHHHHcCCChHH
Confidence            578888888776521 24888876655444556677777776   4445555555665    666666 48999999999


Q ss_pred             EEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHhHH
Q 035566          165 RLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       165 ~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l~~  213 (238)
                      |++|||+. +|+.+|+.+|+.++++.++..        ...++++++++.|+.+++.+
T Consensus       199 ~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~  256 (259)
T 2ho4_A          199 AVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ  256 (259)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred             EEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHH
Confidence            99999998 999999999999999988731        24689999999999887643

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.83  E-value=2.2e-20  Score=138.86  Aligned_cols=122  Identities=19%  Similarity=0.233  Sum_probs=86.9

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC--------CCCCCCCCchHHHHHHHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL--------NPTNKTTGQELQLISMLR  156 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~--------~~~k~~~~~~~~~~~~~~  156 (238)
                      .++.|++.++|+.++.+   .+++|++....+...++.+++..+|+......+.        ... +...+...+..+++
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~K~~~l~~~~~  153 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL-KENAKGEILEKIAK  153 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSC-STTHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCcc-CCccHHHHHHHHHH
Confidence            34568899999888655   4688988888888888888887766554322110        001 11122345555689


Q ss_pred             hcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccC--hhHHHHHh
Q 035566          157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALEN--IHNIREAF  211 (238)
Q Consensus       157 ~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~--~~el~~~l  211 (238)
                      ++|++|++|++|||+.||+.|++.+|+. ++++.... +..|++++.+  +.||.+++
T Consensus       154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~-~~~~~~~~~~~~a~~v~~~~~~~~l~~~l  210 (211)
T 1l7m_A          154 IEGINLEDTVAVGDGANDISMFKKAGLK-IAFCAKPILKEKADICIEKRDLREILKYI  210 (211)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHCSEE-EEESCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred             HcCCCHHHEEEEecChhHHHHHHHCCCE-EEECCCHHHHhhcceeecchhHHHHHHhh
Confidence            9999999999999999999999999996 44553222 5679999988  88876543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.82  E-value=1.8e-20  Score=139.97  Aligned_cols=120  Identities=12%  Similarity=0.082  Sum_probs=87.5

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceeee--cccC----CCCCCCCCchHHHHHHHHh
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIVN--FESL----NPTNKTTGQELQLISMLRM  157 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~~--~~~~----~~~k~~~~~~~~~~~~~~~  157 (238)
                      .++|++.++++.++.+   .+++||+....+...++.+|+.  .+|...+.  .+..    ...+|  .+...+..+++.
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~  159 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNG--ACDSKLSAFDKA  159 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTS--TTTCHHHHHHHH
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCC--CcccHHHHHHHH
Confidence            4679999998887644   6799999999999999999984  35543222  2211    22332  233344445677


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                      +|++|+++++|||+.+|+.|+ ++|+.+++++.+..      +..|+++++++.||.+++
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l  218 (219)
T 3kd3_A          160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI  218 (219)
T ss_dssp             GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred             hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence            799999999999999999998 58998777754432      456999999999998764

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.82  E-value=3.2e-20  Score=136.94  Aligned_cols=118  Identities=16%  Similarity=0.135  Sum_probs=87.3

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC-CCCCCCchHHHHHHHHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP-TNKTTGQELQLISMLRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~-~k~~~~~~~~~~~~~~~~~~~~~  163 (238)
                      ..++|++.++|+.++..   .+++|++....+... +.+|+..+++.+...+.... .+|....   -...++.+  +|+
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---k~~~l~~l--~~~  151 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRD---KGEFLKRF--RDG  151 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSC---HHHHHGGG--TTS
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccC---HHHHHHhc--CcC
Confidence            57889999999888644   579999888888888 89998877555544332111 1221111   12234556  899


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~  214 (238)
                      ++++|||+.+|+.||+.+|+. +++.++..  .|++++.++.|+.+++.++
T Consensus       152 ~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~--~ad~v~~~~~el~~~l~~l  199 (201)
T 4ap9_A          152 FILAMGDGYADAKMFERADMG-IAVGREIP--GADLLVKDLKELVDFIKNL  199 (201)
T ss_dssp             CEEEEECTTCCHHHHHHCSEE-EEESSCCT--TCSEEESSHHHHHHHHHTC
T ss_pred             cEEEEeCCHHHHHHHHhCCce-EEECCCCc--cccEEEccHHHHHHHHHHh
Confidence            999999999999999999996 66665554  9999999999999888765

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.80  E-value=5.1e-19  Score=133.70  Aligned_cols=99  Identities=9%  Similarity=0.105  Sum_probs=72.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC---CC---CCCCCCchHH-HHHHHHhc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL---NP---TNKTTGQELQ-LISMLRMV  158 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~---~~---~k~~~~~~~~-~~~~~~~~  158 (238)
                      .++||+.++|+.++.+   .+|+|++....+..+++.+|+..+|...+...+.   +.   ....++++.. +..+++.+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~  171 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM  171 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence            4689999999888644   6799999999999999999998766544332111   00   0011112333 44468889


Q ss_pred             C---CCCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566          159 A---HHFFQRLFFDDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       159 ~---~~~~~~v~vgD~~~di~~a~~~G~~~i~  187 (238)
                      |   ++|++|++||||.+|+.+++.+|+.++.
T Consensus       172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          172 GLALGDFAESYFYSDSVNDVPLLEAVTRPIAA  203 (232)
T ss_dssp             TCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred             CCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence            9   9999999999999999999999986654

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.80  E-value=1.8e-20  Score=134.13  Aligned_cols=112  Identities=20%  Similarity=0.217  Sum_probs=83.8

Q ss_pred             HHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEe
Q 035566           94 LRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFD  169 (238)
Q Consensus        94 ~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vg  169 (238)
                      ..++|+.++   .+.+++||++...+...++++|+..+|+.         .||    ++..+. +++.++++|+++++||
T Consensus        41 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------~kp----~~~~~~~~~~~~~~~~~~~~~vG  107 (162)
T 2p9j_A           41 DGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------SYK----KLEIYEKIKEKYSLKDEEIGFIG  107 (162)
T ss_dssp             HHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------C------CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------CCC----CHHHHHHHHHHcCCCHHHEEEEC
Confidence            345555554   44689999999999999999998876643         333    455554 6899999999999999


Q ss_pred             CCccchhHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhcc
Q 035566          170 DSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDAD  218 (238)
Q Consensus       170 D~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~  218 (238)
                      |+.+|+.+|+.+|+.+++.+.... ...+++++.++.+   +.+++..+++..
T Consensus       108 D~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~~~  160 (162)
T 2p9j_A          108 DDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAELIHFLK  160 (162)
T ss_dssp             CSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhc
Confidence            999999999999998665433222 4568999999887   557777776543

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.80  E-value=3.3e-20  Score=137.97  Aligned_cols=115  Identities=14%  Similarity=0.146  Sum_probs=86.2

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCcc
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTR  173 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~  173 (238)
                      +.+.|+....+.+|+|+.+...+..+++.+|+..+|+.+         ++   +...+..+++.+|++|+++++|||+.+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------k~---K~~~l~~~~~~lg~~~~~~~~vGDs~n  151 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------SD---KLVAYHELLATLQCQPEQVAYIGDDLI  151 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------SS---HHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------CC---hHHHHHHHHHHcCcCcceEEEEcCCHH
Confidence            455566666678899999999999999999998777654         33   344445568999999999999999999


Q ss_pred             chhHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhcccc
Q 035566          174 NIECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDADEI  220 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~~~  220 (238)
                      |+.+++.+|+.++..+.... +..||+++.+..+   +.+++..++...+.
T Consensus       152 Di~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~~  202 (211)
T 3ij5_A          152 DWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQDK  202 (211)
T ss_dssp             GHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcCc
Confidence            99999999987554443332 6679999988632   45555555555443

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.80  E-value=2.9e-20  Score=133.33  Aligned_cols=109  Identities=16%  Similarity=0.118  Sum_probs=82.8

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCc
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDST  172 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~  172 (238)
                      +.+.|+....+.+++||++...+...++++|+..+|+..         ||    ++..+. +++++|++|+++++|||+.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~---------kp----k~~~~~~~~~~~~~~~~~~~~vGD~~  105 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV---------VD----KLSAAEELCNELGINLEQVAYIGDDL  105 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC---------SC----HHHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc---------CC----hHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            445566656778999999999999999999988776552         43    555555 5899999999999999999


Q ss_pred             cchhHHHhcCCeEEEecCCCC-CccccccccChh---HHHHHhHHhh
Q 035566          173 RNIECGKSIGLHTVLVGTSRR-TKGADYALENIH---NIREAFPELW  215 (238)
Q Consensus       173 ~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~---el~~~l~~~~  215 (238)
                      +|+.+++.+|+.++..+.... +..|++++.+..   .+.+++..++
T Consensus       106 ~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll  152 (164)
T 3e8m_A          106 NDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVL  152 (164)
T ss_dssp             GGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred             HHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence            999999999997665443332 567899998833   1445555554

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.79  E-value=1.2e-19  Score=136.02  Aligned_cols=123  Identities=16%  Similarity=0.178  Sum_probs=96.9

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEecCCh---------------HHHHHHHHhcCcccccceeeec------------cc
Q 035566           88 LKPDPVLRNLLLSLP---IRKVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNF------------ES  137 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~---~~~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~------------~~  137 (238)
                      ..++||+.++|+.|+   .+.+++||+..               ..+...++.+|+.  |+.++.+            +.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~  132 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPD  132 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccC
Confidence            456789999888886   44789999987               6788889998875  6655433            33


Q ss_pred             CCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC-----CccccccccChhHHHHH
Q 035566          138 LNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR-----TKGADYALENIHNIREA  210 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~-----~~~ad~v~~~~~el~~~  210 (238)
                      ....||    .+.++. +++++|++|+++++|||+.+|+.+|+.+|+.+ +++.++..     ...++++++++.||.++
T Consensus       133 ~~~~KP----~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~  208 (218)
T 2o2x_A          133 HPMRKP----NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAA  208 (218)
T ss_dssp             CTTSTT----SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHH
T ss_pred             CccCCC----CHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHH
Confidence            344444    555555 58999999999999999999999999999999 99988753     24689999999999988


Q ss_pred             hHHhhh
Q 035566          211 FPELWD  216 (238)
Q Consensus       211 l~~~~~  216 (238)
                      +..+.+
T Consensus       209 l~~~~~  214 (218)
T 2o2x_A          209 IETLGR  214 (218)
T ss_dssp             HHHTCC
T ss_pred             HHHHhc
Confidence            876544

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.79  E-value=1.9e-21  Score=143.66  Aligned_cols=175  Identities=13%  Similarity=0.062  Sum_probs=113.8

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLG-IEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVH   80 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (238)
                      +++++|+|||||||+|+...+..++.+.+.     .++ .+.....          +.........-.....+++...+.
T Consensus         2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~   66 (197)
T 1q92_A            2 GRALRVLVDMDGVLADFEGGFLRKFRARFP-----DQPFIALEDRR----------GFWVSEQYGRLRPGLSEKAISIWE   66 (197)
T ss_dssp             CCCEEEEECSBTTTBCHHHHHHHHHHHHCT-----TSCCCCGGGCC----------SSCHHHHHHHHSTTHHHHHHHHHT
T ss_pred             CCceEEEEeCCCCCccCcHHHHHHHHHHHh-----cCCCCCHHHhc----------CCcHHHHHHhcCHHHHHHHHHHHH
Confidence            357899999999999975555555544222     221 1111100          000000000000001122333333


Q ss_pred             CCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHH
Q 035566           81 GRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISML  155 (238)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~  155 (238)
                      ........+++||+.++|+.|+.+    .+|+||++...+...++++|+.. +|+                     ...+
T Consensus        67 ~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------------------~~~~  125 (197)
T 1q92_A           67 SKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------------------PDFL  125 (197)
T ss_dssp             STTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------------------GGGG
T ss_pred             hhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------------------HHHH
Confidence            322234578899999999998654    57999998888888889988887 775                     2246


Q ss_pred             HhcCCCCCeEEEEeCCccc----hhHHH-hcCCeEEEecCCCCCc---cccc-cccCh-hHHHHHhH
Q 035566          156 RMVAHHFFQRLFFDDSTRN----IECGK-SIGLHTVLVGTSRRTK---GADY-ALENI-HNIREAFP  212 (238)
Q Consensus       156 ~~~~~~~~~~v~vgD~~~d----i~~a~-~~G~~~i~v~~~~~~~---~ad~-v~~~~-~el~~~l~  212 (238)
                      +++|++|+++++|||+..|    +.+|+ ++|+.+|+++++....   .+++ ++.++ +++..++.
T Consensus       126 ~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~  192 (197)
T 1q92_A          126 EQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD  192 (197)
T ss_dssp             GGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred             HHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence            7899999999999999999    99999 9999999998765321   2234 68899 57877665

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.79  E-value=1.9e-20  Score=144.47  Aligned_cols=118  Identities=10%  Similarity=0.086  Sum_probs=87.1

Q ss_pred             CCCCChhHHHHHhcCCCC-eEEEecCChHH--HHH-HHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR-KVIFSNADEIH--VAK-VLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHH  161 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~-~~i~t~~~~~~--~~~-~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~  161 (238)
                      ...++|++.++|+.|+.. .+++||++...  ... .....++..+|+.+++++.....||    .+.++.. ++++|++
T Consensus       124 ~~~~~~~~~~~l~~l~~g~~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP----~p~~~~~~~~~~~~~  199 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKP----KAIIMERAIAHLGVE  199 (264)
T ss_dssp             TTCCHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTT----SHHHHHHHHHHHCSC
T ss_pred             CCcCHHHHHHHHHHHhCCCEEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCC----CHHHHHHHHHHcCCC
Confidence            346789999998887522 35888876532  111 1222335567888777776666665    6666664 8999999


Q ss_pred             CCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC-----C---ccccccccChhHHH
Q 035566          162 FFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR-----T---KGADYALENIHNIR  208 (238)
Q Consensus       162 ~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~-----~---~~ad~v~~~~~el~  208 (238)
                      |+++++|||+ .+|+.+|+.+|+.++++.++..     .   ..||++++++.|+.
T Consensus       200 ~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~  255 (264)
T 1yv9_A          200 KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT  255 (264)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence            9999999999 5999999999999999987653     1   16899999998864

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.79  E-value=9.4e-19  Score=136.74  Aligned_cols=131  Identities=14%  Similarity=0.121  Sum_probs=84.4

Q ss_pred             ChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhc-Ccccccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566           91 DPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKL-GLEDCFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHFFQRL  166 (238)
Q Consensus        91 ~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~-~~~~~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~v  166 (238)
                      .+++.+++..+...  .++++. .......+.+.+ +....+..+.+... .....++..+...+..+++++|+++++++
T Consensus       144 ~~~~~~~~~~~~~~~~ki~~~~-~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i  222 (290)
T 3dnp_A          144 VESLSDLLMDEPVSAPVIEVYT-EHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVV  222 (290)
T ss_dssp             CSCHHHHHHHSCCCCSEEEEEC-CGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred             cCCHHHHHhcCCCCceEEEEeC-CHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEE
Confidence            45666777665543  334443 334444444442 12223444433322 22222333456667778999999999999


Q ss_pred             EEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhhhccccccc
Q 035566          167 FFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELWDADEISKN  223 (238)
Q Consensus       167 ~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~~~~~~~~  223 (238)
                      +|||+.||++|++.+|+. +.+.++.+  +..|++++.+.+|  +.+.|.+++........
T Consensus       223 ~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~~~  282 (290)
T 3dnp_A          223 AIGHQYDDLPMIELAGLG-VAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKGF  282 (290)
T ss_dssp             EEECSGGGHHHHHHSSEE-EECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC--
T ss_pred             EECCchhhHHHHHhcCCE-EEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCcccH
Confidence            999999999999999974 55555443  6779999999988  98999888776554433

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.79  E-value=7.8e-20  Score=154.21  Aligned_cols=101  Identities=22%  Similarity=0.278  Sum_probs=81.8

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecC--ChHHHHHHHHhc--CcccccceeeecccCCCCCCCCCchHHHHHH-HHhcC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNA--DEIHVAKVLRKL--GLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVA  159 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~--~~~~~~~~l~~~--~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~  159 (238)
                      ..++||+.++|+.|+.+   .+|+||+  ........+...  |+..+|+.++++++.+..||    .+.+|.. ++++|
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP----~p~~~~~~~~~lg  174 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKP----EPQIYKFLLDTLK  174 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTT----CHHHHHHHHHHHT
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCC----CHHHHHHHHHHcC
Confidence            57889999999888644   6799998  222222233333  67889999999999998887    7777775 89999


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|++|++|||+.+|+.+|+.+|+.+++++++.
T Consensus       175 ~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~  207 (555)
T 3i28_A          175 ASPSEVVFLDDIGANLKPARDLGMVTILVQDTD  207 (555)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred             CChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999999999999999999997754

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.79  E-value=1.6e-19  Score=148.01  Aligned_cols=120  Identities=13%  Similarity=0.095  Sum_probs=91.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeec-------c---cCCCCCCCCCchHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNF-------E---SLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~-------~---~~~~~k~~~~~~~~~~~-  153 (238)
                      ++++||+.++|+.|+..   .+++||+....+..+++.+|+..+|...+..       .   .....|    +++.++. 
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~k----pk~~~~~~  330 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRA----GKATALRE  330 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHH----HHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCc----chHHHHHH
Confidence            47889999999888644   5799999999999999999998877654321       1   122233    4666666 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Ccccccccc--ChhHHHHHhH
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALE--NIHNIREAFP  212 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~--~~~el~~~l~  212 (238)
                      +++++|++|+++++|||+.+|+.|++.+|+.+++ +.... +..|++++.  ++.++..++.
T Consensus       331 ~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~  391 (415)
T 3p96_A          331 FAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLG  391 (415)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTT
T ss_pred             HHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhC
Confidence            4899999999999999999999999999998776 33322 556787755  6777776653

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.78  E-value=5.3e-21  Score=140.83  Aligned_cols=174  Identities=12%  Similarity=0.041  Sum_probs=111.8

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCC
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRL   83 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (238)
                      .++|+||+||||+|+...+..++.+     .++  |++......+.....   +   ..+... .....+.+.+.+....
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~-----~~~--g~~~~~~~~~~~~~~---~---~~~~~~-~~~~~~~~~~~~~~~~   67 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRR-----RFP--EEPHVPLEQRRGFLA---R---EQYRAL-RPDLADKVASVYEAPG   67 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHH-----HST--TSCCCCGGGCCSSCH---H---HHHHHH-CTTHHHHHHHHHTSTT
T ss_pred             CcEEEEECCCcCccchhHHHHHHHH-----Hhc--CCCCCCHHHHHHhhH---H---HHHHHH-hHHHHHHHHHHHHhcC
Confidence            5899999999999965544444442     222  543111000000000   0   000000 0111233444444332


Q ss_pred             CCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566           84 PYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVA  159 (238)
Q Consensus        84 ~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~  159 (238)
                      .....+++||+.++|+.|+.+    .+++||++...+...++.+|+   |+.+++++                 +++++|
T Consensus        68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~-----------------~~~~~~  127 (193)
T 2i7d_A           68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ-----------------FVERII  127 (193)
T ss_dssp             TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH-----------------HHTTEE
T ss_pred             ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH-----------------HHHHcC
Confidence            234578899999999998764    469999988888888998887   77666432                 568899


Q ss_pred             CCCCeEEEEeCCccc----hhHHH-hcCCeEEEecCCCCCc---cccc-cccCh-hHHHHHh
Q 035566          160 HHFFQRLFFDDSTRN----IECGK-SIGLHTVLVGTSRRTK---GADY-ALENI-HNIREAF  211 (238)
Q Consensus       160 ~~~~~~v~vgD~~~d----i~~a~-~~G~~~i~v~~~~~~~---~ad~-v~~~~-~el~~~l  211 (238)
                      ++|++|++|||+.+|    +.+|+ ++|+++++++++....   .+++ ++.++ +++.+++
T Consensus       128 ~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  189 (193)
T 2i7d_A          128 LTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREIL  189 (193)
T ss_dssp             ECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHHH
T ss_pred             CCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHHHh
Confidence            999999999999999    99999 9999999997754321   2344 58888 5566554

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.78  E-value=6.9e-19  Score=136.75  Aligned_cols=112  Identities=16%  Similarity=0.210  Sum_probs=71.6

Q ss_pred             EEEecCChHHHHHHHHhcC--cccccceeeecccC-CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          106 VIFSNADEIHVAKVLRKLG--LEDCFDGIVNFESL-NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       106 ~i~t~~~~~~~~~~l~~~~--~~~~f~~i~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      +++.+ +......+.+.+.  +...+..+.+.... ....++..+...+..+++++|++++++++|||+.||++|++.+|
T Consensus       155 i~~~~-~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag  233 (279)
T 4dw8_A          155 CLIVG-DAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAG  233 (279)
T ss_dssp             EEEES-CHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred             EEEeC-CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcC
Confidence            34443 3334444444432  22335555443322 22223334566666679999999999999999999999999999


Q ss_pred             CeEEEecCCCC--CccccccccChhH--HHHHhHHhhhccc
Q 035566          183 LHTVLVGTSRR--TKGADYALENIHN--IREAFPELWDADE  219 (238)
Q Consensus       183 ~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~~~~  219 (238)
                      + .+.++++.+  +..|++++.+.+|  +.+.|.+++...+
T Consensus       234 ~-~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~  273 (279)
T 4dw8_A          234 M-GVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVEG  273 (279)
T ss_dssp             E-EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC----
T ss_pred             c-EEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhccc
Confidence            6 455555543  6679999999877  8888887765443

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.78  E-value=1.8e-20  Score=145.08  Aligned_cols=121  Identities=16%  Similarity=0.137  Sum_probs=85.3

Q ss_pred             CCCChhHHHHHhcCCCC-eEEEecCChHHHHH---HHHhcCcccccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR-KVIFSNADEIHVAK---VLRKLGLEDCFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~---~l~~~~~~~~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~  162 (238)
                      ..+++++.+.++.+... .+++||........   .++..++..+|+.+++.+. ....||   +...+..+++++|++|
T Consensus       136 ~~~~~~~~~~l~~l~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kp---k~~~~~~~~~~lgi~~  212 (271)
T 1vjr_A          136 TLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKP---NPLVVDVISEKFGVPK  212 (271)
T ss_dssp             TCCHHHHHHHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTT---STHHHHHHHHHHTCCG
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCC---CHHHHHHHHHHhCCCC
Confidence            35678888888777322 34778765432111   1222334556666666555 555565   3444444689999999


Q ss_pred             CeEEEEeCC-ccchhHHHhcCCeEEEecCCCCC--------ccccccccChhHHHHHh
Q 035566          163 FQRLFFDDS-TRNIECGKSIGLHTVLVGTSRRT--------KGADYALENIHNIREAF  211 (238)
Q Consensus       163 ~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~~--------~~ad~v~~~~~el~~~l  211 (238)
                      +++++|||+ .||+.||+.+|+.++++.++...        ..|+++++++.||.+++
T Consensus       213 ~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l  270 (271)
T 1vjr_A          213 ERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV  270 (271)
T ss_dssp             GGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred             ceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence            999999999 59999999999999999887531        37899999999998764

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.78  E-value=4.6e-20  Score=135.25  Aligned_cols=105  Identities=17%  Similarity=0.239  Sum_probs=80.7

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCcc
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTR  173 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~  173 (238)
                      +.+.|+....+.+++|++....+..+++++|+..+|+.+         ++   +...+..+++++|++|+++++|||+.+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------~~---K~~~~~~~~~~~g~~~~~~~~vGD~~n  121 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------ED---KLVVLDKLLAELQLGYEQVAYLGDDLP  121 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------SC---HHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------CC---hHHHHHHHHHHcCCChhHEEEECCCHH
Confidence            455566666678999999999999999999998877764         22   234455568999999999999999999


Q ss_pred             chhHHHhcCCeEEEecCCCC--CccccccccC------hhHHHHHh
Q 035566          174 NIECGKSIGLHTVLVGTSRR--TKGADYALEN------IHNIREAF  211 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~------~~el~~~l  211 (238)
                      |+.+++.+|+.++ +.++.+  +..|++++.+      +.++.+.+
T Consensus       122 Di~~~~~ag~~~~-~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l  166 (189)
T 3mn1_A          122 DLPVIRRVGLGMA-VANAASFVREHAHGITRAQGGEGAAREFCELI  166 (189)
T ss_dssp             GHHHHHHSSEEEE-CTTSCHHHHHTSSEECSSCTTTTHHHHHHHHH
T ss_pred             HHHHHHHCCCeEE-eCCccHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence            9999999998654 433332  5678999988      45555544

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.78  E-value=4.7e-20  Score=133.71  Aligned_cols=104  Identities=17%  Similarity=0.183  Sum_probs=77.9

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCcc
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTR  173 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~  173 (238)
                      +.+.|+....+.+|+|++....+..+++.+|+. +|..    .     +|   +...+..+++.+|++++++++|||+.|
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~----~-----~~---k~~~l~~~~~~~~~~~~~~~~vGD~~n  113 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHG----I-----DR---KDLALKQWCEEQGIAPERVLYVGNDVN  113 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEES----C-----SC---HHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeC----C-----CC---hHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence            455566666678899999999999999999986 3322    1     33   334444568999999999999999999


Q ss_pred             chhHHHhcCCeEEEecCCCC--CccccccccC------hhHHHHHh
Q 035566          174 NIECGKSIGLHTVLVGTSRR--TKGADYALEN------IHNIREAF  211 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~------~~el~~~l  211 (238)
                      |+.+++.+|+.++ +.++.+  +..|++++.+      +.++.+++
T Consensus       114 D~~~~~~ag~~v~-~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l  158 (176)
T 3mmz_A          114 DLPCFALVGWPVA-VASAHDVVRGAARAVTTVPGGDGAIREIASWI  158 (176)
T ss_dssp             GHHHHHHSSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred             HHHHHHHCCCeEE-CCChhHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence            9999999998644 433332  5678999998      56665544

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.77  E-value=1.7e-19  Score=140.85  Aligned_cols=110  Identities=12%  Similarity=0.160  Sum_probs=88.0

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~  163 (238)
                      ..+++||+.++|+.|+.+   .+++||++...+..+++.+|+..+|+.++.       .    .+   ...++.++.. +
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~-------~----~K---~~~~~~l~~~-~  225 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP-------H----QK---SEEVKKLQAK-E  225 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT-------T----CH---HHHHHHHTTT-C
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh-------H----HH---HHHHHHHhcC-C
Confidence            357899999999888643   679999999999999999999888876641       1    12   3457888888 9


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHhH
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAFP  212 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l~  212 (238)
                      +|++|||+.+|+.+|+.+|+. +.++++..  ...+++++  +++.++.+++.
T Consensus       226 ~~~~vGDs~~Di~~a~~ag~~-v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~  277 (287)
T 3a1c_A          226 VVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  277 (287)
T ss_dssp             CEEEEECTTTCHHHHHHSSEE-EEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred             eEEEEECCHHHHHHHHHCCee-EEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence            999999999999999999997 55544332  56789999  99999887664

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.77  E-value=2.4e-20  Score=146.93  Aligned_cols=121  Identities=17%  Similarity=0.150  Sum_probs=90.0

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHH--H-HHHHhcC-cccccceeeecccCCCCCCCCCchHHHHH-HHHhcCC
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHV--A-KVLRKLG-LEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAH  160 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~--~-~~l~~~~-~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~  160 (238)
                      ..++|++.++++.++.+  .+++||.+....  . ..+...| +..+|+.+++.+.....||    ++.++. +++++|+
T Consensus       155 ~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP----~~~~~~~~~~~lgi  230 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP----SPYMFECITENFSI  230 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTT----STHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCC----CHHHHHHHHHHcCC
Confidence            45678999988887643  678888765432  1 2233334 5566777777666666665    555555 5899999


Q ss_pred             CCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCCC--------------ccccccccChhHHHHHhH
Q 035566          161 HFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRRT--------------KGADYALENIHNIREAFP  212 (238)
Q Consensus       161 ~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~~--------------~~ad~v~~~~~el~~~l~  212 (238)
                      +|+++++|||+. +|+.+|+.+|+.++++.++...              ..|+++++++.||.+++.
T Consensus       231 ~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~  297 (306)
T 2oyc_A          231 DPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE  297 (306)
T ss_dssp             CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred             ChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence            999999999996 9999999999999999887531              368999999999877654

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.77  E-value=1.5e-19  Score=139.41  Aligned_cols=69  Identities=13%  Similarity=0.205  Sum_probs=57.3

Q ss_pred             chHHHHH-HHHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCC---C-----CccccccccChhHHHHHhHHhh
Q 035566          147 QELQLIS-MLRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSR---R-----TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       147 ~~~~~~~-~~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~---~-----~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      |++..+. +++++|++|+++++|||+. ||+.||+.+|+.++++.++.   .     ...|+++++++.|+.+++.+..
T Consensus       191 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  269 (271)
T 2x4d_A          191 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHA  269 (271)
T ss_dssp             TCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhhc
Confidence            3555555 5899999999999999998 99999999999999998872   1     1348999999999988776543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.77  E-value=1.9e-19  Score=139.71  Aligned_cols=109  Identities=14%  Similarity=0.226  Sum_probs=83.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +++|++.++|+.++..   .+++|+.....+..+++.+|+..+|+.+++.+.          ...+....+.+     ++
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k----------~~~~k~~~~~~-----~~  208 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK----------AEKVKEVQQKY-----VT  208 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH----------HHHHHHHHTTS-----CE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH----------HHHHHHHHhcC-----CE
Confidence            5789999998888643   679999999999999999999999988775542          33333333433     78


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHhHH
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAFPE  213 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l~~  213 (238)
                      ++|||+.||+.|++.+|+. +.++++..  ...+++++  +++.++.+++..
T Consensus       209 ~~vGD~~nDi~~~~~Ag~~-va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          209 AMVGDGVNDAPALAQADVG-IAIGAGTDVAVETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             EEEECTTTTHHHHHHSSEE-EECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred             EEEeCCchhHHHHHhCCce-EEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence            9999999999999999974 44444332  55678777  899999988753

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.76  E-value=7.6e-19  Score=129.06  Aligned_cols=114  Identities=15%  Similarity=0.175  Sum_probs=84.5

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN  174 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d  174 (238)
                      .+.|+....+.+|+||++...+..+++.+|+..+|+..         ||   +...+..+++++|++|+++++|||+.||
T Consensus        61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~---------k~---k~~~~~~~~~~~~~~~~~~~~vGD~~nD  128 (195)
T 3n07_A           61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ---------DD---KVQAYYDICQKLAIAPEQTGYIGDDLID  128 (195)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC---------SS---HHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred             HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC---------CC---cHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence            45556666778999999999999999999988766542         33   3344455689999999999999999999


Q ss_pred             hhHHHhcCCeEEEecCCCC--CccccccccChhH---HHHHhHHhhhccccc
Q 035566          175 IECGKSIGLHTVLVGTSRR--TKGADYALENIHN---IREAFPELWDADEIS  221 (238)
Q Consensus       175 i~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e---l~~~l~~~~~~~~~~  221 (238)
                      +.+++.+|+.++ +.++.+  +..|++++.+..+   +.+++..++++.+..
T Consensus       129 i~~~~~ag~~va-~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~  179 (195)
T 3n07_A          129 WPVMEKVALRVC-VADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNEL  179 (195)
T ss_dssp             HHHHTTSSEEEE-CTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHCCCEEE-ECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccH
Confidence            999999998654 444332  5678999987543   445555556555544

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.75  E-value=3e-18  Score=133.87  Aligned_cols=125  Identities=11%  Similarity=0.113  Sum_probs=88.4

Q ss_pred             CCChhHHHHHhcCC----CCeEEEecC---------------------ChHHHHHHHHhcCccccccee----------e
Q 035566           89 KPDPVLRNLLLSLP----IRKVIFSNA---------------------DEIHVAKVLRKLGLEDCFDGI----------V  133 (238)
Q Consensus        89 ~~~~~~~~~l~~l~----~~~~i~t~~---------------------~~~~~~~~l~~~~~~~~f~~i----------~  133 (238)
                      .+.+++.++++.++    ....+.|+.                     ....+...++..|+..+|...          .
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            45678888887763    334566655                     445666777888887666543          3


Q ss_pred             ecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHH
Q 035566          134 NFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IRE  209 (238)
Q Consensus       134 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~  209 (238)
                      ..+.....++   +...+..+++.+|++|+++++|||+.||+.|++.+|+. +.++++.+  +..|++++.+..+  +.+
T Consensus       202 ~~~~~~~~~~---k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~~~~~~~~~a~~v~~~~~~~gv~~  277 (289)
T 3gyg_A          202 DVDFIPIGTG---KNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKNATQEAKNLHNLITDSEYSKGITN  277 (289)
T ss_dssp             EEEEEESCCS---HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTTCCHHHHHHCCCBCSSCHHHHHHH
T ss_pred             EEEEEeCCCC---HHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECCccHHHHHhCCEEcCCCCcCHHHH
Confidence            3333333332   44555567999999999999999999999999999965 55555543  5568999999887  888


Q ss_pred             HhHHhhhc
Q 035566          210 AFPELWDA  217 (238)
Q Consensus       210 ~l~~~~~~  217 (238)
                      .+.+++..
T Consensus       278 ~~~~~~~~  285 (289)
T 3gyg_A          278 TLKKLIGF  285 (289)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHHHHH
Confidence            88887764

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.75  E-value=2.8e-19  Score=124.09  Aligned_cols=87  Identities=20%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             CCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHh
Q 035566          102 PIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKS  180 (238)
Q Consensus       102 ~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~  180 (238)
                      ..+.+++||++...+...++.+|+..+|+.+++++.....||    .+.++. +++++|++|+++++|||+.+|+.+|++
T Consensus        34 G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp----~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~  109 (137)
T 2pr7_A           34 GVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKP----EEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVE  109 (137)
T ss_dssp             TCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTT----SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH
T ss_pred             CCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCC----CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence            345689999988888889999999999999998887777776    666666 589999999999999999999999999


Q ss_pred             cCCeEEEecCCC
Q 035566          181 IGLHTVLVGTSR  192 (238)
Q Consensus       181 ~G~~~i~v~~~~  192 (238)
                      +|+.+++++++.
T Consensus       110 ~G~~~i~~~~~~  121 (137)
T 2pr7_A          110 AGLVGVYYQQFD  121 (137)
T ss_dssp             HTCEEEECSCHH
T ss_pred             CCCEEEEeCChH
Confidence            999999987653

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.75  E-value=4.4e-19  Score=136.78  Aligned_cols=120  Identities=13%  Similarity=0.096  Sum_probs=89.3

Q ss_pred             CCCChhHHHHHhcCCC-CeEEEecCChHHH--HHHHHh-cCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPI-RKVIFSNADEIHV--AKVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~-~~~i~t~~~~~~~--~~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ..++|++.++++.|+. ..+++||++....  ...+.. .++..+|+.+++++.....||    .+.+++. +++  ++|
T Consensus       129 ~~~~~~~~~~l~~L~~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP----~~~~~~~~~~~--~~~  202 (263)
T 1zjj_A          129 DLTYEKLKYATLAIRNGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKP----NEPMYEVVREM--FPG  202 (263)
T ss_dssp             TCBHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTT----SHHHHHHHHHH--STT
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCC----CHHHHHHHHHh--CCc
Confidence            4668999999987762 2358898866433  122222 345567888877776666665    7777776 555  999


Q ss_pred             CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-----C---ccccccccChhHHHHHhHH
Q 035566          163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-----T---KGADYALENIHNIREAFPE  213 (238)
Q Consensus       163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-----~---~~ad~v~~~~~el~~~l~~  213 (238)
                      ++++||||++ +|+.+|+.+|+.+++|.++..     .   ..++++++++.||.+++.+
T Consensus       203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~  262 (263)
T 1zjj_A          203 EELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLKT  262 (263)
T ss_dssp             CEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred             ccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence            9999999996 999999999999999988753     1   2689999999999876643

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.74  E-value=1.1e-17  Score=126.47  Aligned_cols=107  Identities=13%  Similarity=0.155  Sum_probs=73.8

Q ss_pred             EEEe-cCChHHHHHHHHhcCcccccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCC
Q 035566          106 VIFS-NADEIHVAKVLRKLGLEDCFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       106 ~i~t-~~~~~~~~~~l~~~~~~~~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~  183 (238)
                      .+++ +.....+..+++.++  ..|+.+ +... .....++.++...+..+++++|++++++++|||+.||+.|++.+|+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~  190 (231)
T 1wr8_A          114 VIMRETINVETVREIINELN--LNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY  190 (231)
T ss_dssp             EECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             EEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCC
Confidence            3444 336667777777754  456655 3321 1111122224445555689999999999999999999999999998


Q ss_pred             eEEEecCCCC--CccccccccChhH--HHHHhHHhhh
Q 035566          184 HTVLVGTSRR--TKGADYALENIHN--IREAFPELWD  216 (238)
Q Consensus       184 ~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~  216 (238)
                      . +.+.++.+  +..|++++.+..+  +.+.+.+++.
T Consensus       191 ~-v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~~  226 (231)
T 1wr8_A          191 K-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHILE  226 (231)
T ss_dssp             E-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHH
T ss_pred             e-EEecCCCHHHHhhCCEEecCCCcchHHHHHHHHHH
Confidence            7 66766543  4579999999877  7787877654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.74  E-value=3e-19  Score=137.85  Aligned_cols=83  Identities=14%  Similarity=0.220  Sum_probs=63.1

Q ss_pred             ccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC-----Cc---ccc
Q 035566          128 CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR-----TK---GAD  198 (238)
Q Consensus       128 ~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~-----~~---~ad  198 (238)
                      +|+.+++.+.....||   +...+..+++.+|++++++++|||+ .||+.||+.+|+.+++++++..     +.   .||
T Consensus       169 ~~~~~~~~~~~~~~kp---~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d  245 (266)
T 3pdw_A          169 VLTVSTGVQPVFIGKP---ESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPT  245 (266)
T ss_dssp             HHHHHHCCCCEECSTT---SSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCS
T ss_pred             HHHHHhCCCccccCCC---CHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCC
Confidence            4454555554555554   3444445699999999999999999 7999999999999999997652     22   599


Q ss_pred             ccccChhHHHHHhHH
Q 035566          199 YALENIHNIREAFPE  213 (238)
Q Consensus       199 ~v~~~~~el~~~l~~  213 (238)
                      ++++++.||.+-++.
T Consensus       246 ~v~~~~~el~~~~~~  260 (266)
T 3pdw_A          246 HAIDSLTEWIPYIEG  260 (266)
T ss_dssp             EEESSGGGGHHHHHH
T ss_pred             EEeCCHHHHHHHhhc
Confidence            999999999876653

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.74  E-value=4.2e-18  Score=135.77  Aligned_cols=126  Identities=12%  Similarity=0.115  Sum_probs=94.7

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecc----------cCCCCCCCCCchHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE----------SLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~----------~~~~~k~~~~~~~~~~~-  153 (238)
                      ++++||+.++++.++..   .+++||+....+..+++.+|+..+|+..+...          .....|    +++..+. 
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~k----pk~~~~~~  252 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQ----TKADILLT  252 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHH----HHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChh----hhHHHHHH
Confidence            57889999999888644   67999999999999999999988877643221          222333    3566555 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Cccccccc--cChhHHHHHhHHhhhcc
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYAL--ENIHNIREAFPELWDAD  218 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~--~~~~el~~~l~~~~~~~  218 (238)
                      +++++|++|+++++|||+.||+.|++.+|+.+++ +..+. +..+++++  +++.++..+|...+...
T Consensus       253 ~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~  319 (335)
T 3n28_A          253 LAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQ  319 (335)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHT
T ss_pred             HHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHh
Confidence            5899999999999999999999999999997776 33322 55566655  46777888777766544

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.74  E-value=6.1e-18  Score=123.03  Aligned_cols=114  Identities=14%  Similarity=0.150  Sum_probs=83.2

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCcc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTR  173 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~  173 (238)
                      .+.|+....+.+++|+.+...+...++.+|+..+|+.         .+|    ++..++ +++++|++|+++++|||+.+
T Consensus        44 l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------~k~----k~~~~~~~~~~~~~~~~~~~~vGD~~~  110 (180)
T 1k1e_A           44 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------KLE----KETACFDLMKQAGVTAEQTAYIGDDSV  110 (180)
T ss_dssp             HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------CSC----HHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             HHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------CCC----cHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            3344444456789999999999999999998876532         233    555554 68999999999999999999


Q ss_pred             chhHHHhcCCeEEEecCCCC-CccccccccChhH--HH-HHhHHhhhccccc
Q 035566          174 NIECGKSIGLHTVLVGTSRR-TKGADYALENIHN--IR-EAFPELWDADEIS  221 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e--l~-~~l~~~~~~~~~~  221 (238)
                      |+.+++.+|+.+++.+.... +..|++++.+..+  +. +++..++...+..
T Consensus       111 Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~  162 (180)
T 1k1e_A          111 DLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKS  162 (180)
T ss_dssp             GHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCch
Confidence            99999999998765433222 5679999988654  33 5566666554443

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.74  E-value=2.5e-18  Score=125.84  Aligned_cols=97  Identities=18%  Similarity=0.223  Sum_probs=81.3

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCC-hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNAD-EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~-~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      ..+++|++.++|+.|+.   +.+++||++ ...+...++.+|+..+|+.++...     ++    ++..+. +++++|++
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~----k~~~~~~~~~~~~~~  136 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP-----GS----KITHFERLQQKTGIP  136 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-----SC----HHHHHHHHHHHHCCC
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-----Cc----hHHHHHHHHHHcCCC
Confidence            45788999999988864   468999998 689999999999999999875433     12    344444 58999999


Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      |+++++|||+.+|+.+|+.+|+.++++.++.
T Consensus       137 ~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~  167 (187)
T 2wm8_A          137 FSQMIFFDDERRNIVDVSKLGVTCIHIQNGM  167 (187)
T ss_dssp             GGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred             hHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence            9999999999999999999999999998875

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.73  E-value=2.9e-17  Score=119.43  Aligned_cols=168  Identities=13%  Similarity=0.131  Sum_probs=101.4

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhh
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVH   80 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (238)
                      || +++|+|||||||+|+...+..++.        +.+|.+.....     +   .|.......  +  ...+.+.+.+.
T Consensus         2 Mm-~~~viFD~DGtL~Ds~~~~~~~~~--------~~~g~~~~~~~-----~---~g~~~~~~~--~--~~~~~~~~~~~   60 (180)
T 3bwv_A            2 MT-RQRIAIDMDEVLADTLGAVVKAVN--------ERADLNIKMES-----L---NGKKLKHMI--P--EHEGLVMDILK   60 (180)
T ss_dssp             -C-CCEEEEETBTTTBCHHHHHHHHHH--------HHSCCCCCGGG-----C---TTCCC------------CHHHHHHH
T ss_pred             Cc-ccEEEEeCCCcccccHHHHHHHHH--------HHhCCCCCHHH-----H---cCccHHHHC--C--chHHHHHHHHh
Confidence            55 589999999999996444433332        24565422110     0   021111111  0  11122333322


Q ss_pred             CCCCCCCCCCChhHHHHHhcCCCC--eEEEecC---ChH--HHHHHHHh-cCcccccceeeecccCCCCCCCCCchHHHH
Q 035566           81 GRLPYENLKPDPVLRNLLLSLPIR--KVIFSNA---DEI--HVAKVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLI  152 (238)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~---~~~--~~~~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~  152 (238)
                      ........+++||+.++|+.|+..  .+|+||+   +..  .....+.. ++...+++.+++++..              
T Consensus        61 ~~~~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------------  126 (180)
T 3bwv_A           61 EPGFFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------------  126 (180)
T ss_dssp             STTGGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------------
T ss_pred             CcchhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------------
Confidence            222223578999999999998764  6799998   321  22333444 5666677777765531              


Q ss_pred             HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccChhHHHHHhHHh
Q 035566          153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~el~~~l~~~  214 (238)
                          ++    ++|++|||+++++.  ..+| ++++++++.. ...++++++++.||..++.++
T Consensus       127 ----~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~  178 (180)
T 3bwv_A          127 ----II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNSI  178 (180)
T ss_dssp             ----GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred             ----ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence                12    67899999999985  4579 9999976543 356889999999998877543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.73  E-value=2.2e-18  Score=133.47  Aligned_cols=105  Identities=12%  Similarity=0.058  Sum_probs=71.6

Q ss_pred             eEEEecCChHHHHHHHHhcCcccccceeeecc---cCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566          105 KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE---SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       105 ~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~  181 (238)
                      .++++ ........+.+.++.  .|+.+.+..   ......+...+...+..+++++|++++++++|||+.||++|++.+
T Consensus       159 ki~~~-~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a  235 (274)
T 3fzq_A          159 KICLW-SNEKVFDEVKDILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQAS  235 (274)
T ss_dssp             EEEEE-CCHHHHHHHHHHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTC
T ss_pred             EEEEE-cCHHHHHHHHHHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhc
Confidence            34455 566666666766543  244444332   112222333456667777999999999999999999999999999


Q ss_pred             CCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566          182 GLHTVLVGTSRR--TKGADYALENIHN--IREAFPE  213 (238)
Q Consensus       182 G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~  213 (238)
                      |+. +.++++.+  +..|++++.+.+|  +...|.+
T Consensus       236 g~~-vam~na~~~~k~~A~~v~~~~~edGv~~~l~~  270 (274)
T 3fzq_A          236 DVT-IAMKNSHQQLKDIATSICEDIFDNGIYKELKR  270 (274)
T ss_dssp             SEE-EEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred             Cce-EEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence            975 44544443  6679999999887  6666655

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.73  E-value=1e-19  Score=141.84  Aligned_cols=113  Identities=19%  Similarity=0.135  Sum_probs=84.6

Q ss_pred             CChhHHHHHhcCCCCeEEEecCChHHH--H--HHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhc----CC
Q 035566           90 PDPVLRNLLLSLPIRKVIFSNADEIHV--A--KVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMV----AH  160 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~~~i~t~~~~~~~--~--~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~----~~  160 (238)
                      .++++.+.|+....+ +++||++....  .  .+++..++..+|+.+++++.....||    .+.++.. ++++    |+
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP----~p~~~~~a~~~l~~~~~~  223 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKP----DSQMFMFAYDMLRQKMEI  223 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTT----SSHHHHHHHHHHHTTSCC
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCC----CHHHHHHHHHHHhhccCC
Confidence            345555555444555 89999876544  2  12345567788999888887777776    6666665 8999    99


Q ss_pred             CCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-----C-------ccccccccChhHH
Q 035566          161 HFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-----T-------KGADYALENIHNI  207 (238)
Q Consensus       161 ~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-----~-------~~ad~v~~~~~el  207 (238)
                      +|++++||||++ +|+.+|+++|+.++++.++..     .       ..|+++++++.||
T Consensus       224 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          224 SKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             CcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            999999999995 999999999999999988753     1       3578888887764

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.73  E-value=1.7e-18  Score=125.39  Aligned_cols=99  Identities=16%  Similarity=0.266  Sum_probs=78.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecC---------------ChHHHHHHHHhcCcccccceeeec-----ccCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNA---------------DEIHVAKVLRKLGLEDCFDGIVNF-----ESLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~---------------~~~~~~~~l~~~~~~~~f~~i~~~-----~~~~~~k~~  144 (238)
                      .+++||+.++|+.|+.+   .+|+||+               ....+...++.+|+.  |+.++.+     +.....|| 
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP-  117 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKP-  117 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTT-
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCC-
Confidence            56789999999988654   5799998               567888899999987  8887654     55666665 


Q ss_pred             CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                         .+.++.. ++++|++|++++||||+.+|+.+|+++|+.++++.++.
T Consensus       118 ---~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          118 ---KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             ---SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             ---CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence               5666664 78999999999999999999999999999999998874

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.72  E-value=8.3e-18  Score=123.37  Aligned_cols=98  Identities=16%  Similarity=0.231  Sum_probs=76.9

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN  174 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d  174 (238)
                      .+.|+....+.+++||++...+...++.+|+..+|+.+         ||   +...+..+++.+|++|+++++|||+.+|
T Consensus        55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------kp---k~~~~~~~~~~~~~~~~~~~~vGD~~~D  122 (191)
T 3n1u_A           55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------VD---KRSAYQHLKKTLGLNDDEFAYIGDDLPD  122 (191)
T ss_dssp             HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------SS---CHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred             HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------CC---hHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence            34455556678999999999999999999998776654         43   3444445689999999999999999999


Q ss_pred             hhHHHhcCCeEEEecCCCC--CccccccccChh
Q 035566          175 IECGKSIGLHTVLVGTSRR--TKGADYALENIH  205 (238)
Q Consensus       175 i~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~  205 (238)
                      +.+++.+|+.+ .+.++.+  +..|++++.+..
T Consensus       123 i~~~~~ag~~~-~~~~~~~~~~~~ad~v~~~~~  154 (191)
T 3n1u_A          123 LPLIQQVGLGV-AVSNAVPQVLEFADWRTERTG  154 (191)
T ss_dssp             HHHHHHSSEEE-ECTTCCHHHHHHSSEECSSCT
T ss_pred             HHHHHHCCCEE-EeCCccHHHHHhCCEEecCCC
Confidence            99999999976 4544433  567899998843

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.72  E-value=1.4e-18  Score=133.95  Aligned_cols=77  Identities=14%  Similarity=0.202  Sum_probs=60.9

Q ss_pred             ccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC-----C---ccc
Q 035566          128 CFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR-----T---KGA  197 (238)
Q Consensus       128 ~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~-----~---~~a  197 (238)
                      +|+.+++.+.....||    .+.+++ +++++|++|+++++|||+ .+|+.+|+.+|+.++++.++..     .   ..|
T Consensus       168 ~~~~~~~~~~~~~~Kp----~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~p  243 (264)
T 3epr_A          168 LLEAATRIKPVFIGKP----NAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQP  243 (264)
T ss_dssp             HHHHHHSCCCEECSTT----SHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCC
T ss_pred             HHHHHhCCCcccCCCC----CHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCC
Confidence            3455555555555655    666666 589999999999999999 6999999999999999988752     1   268


Q ss_pred             cccccChhHHH
Q 035566          198 DYALENIHNIR  208 (238)
Q Consensus       198 d~v~~~~~el~  208 (238)
                      |++++++.||.
T Consensus       244 d~~~~~l~~l~  254 (264)
T 3epr_A          244 SYVLASLDEWT  254 (264)
T ss_dssp             SEEESCGGGCC
T ss_pred             CEEECCHHHHh
Confidence            99999998874

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.71  E-value=3.4e-17  Score=127.20  Aligned_cols=107  Identities=10%  Similarity=0.063  Sum_probs=61.5

Q ss_pred             CChHHHHHHHHhcC--cccccceeeecccC-CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566          111 ADEIHVAKVLRKLG--LEDCFDGIVNFESL-NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVL  187 (238)
Q Consensus       111 ~~~~~~~~~l~~~~--~~~~f~~i~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~  187 (238)
                      ..........+.+.  +.+.+..+.+.... ....++..+...+..+++++|++++++++|||+.||++|++.+|+..++
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  238 (279)
T 3mpo_A          159 DYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM  238 (279)
T ss_dssp             CCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC
T ss_pred             CCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec
Confidence            45556666666653  22224433333222 2222333456677777999999999999999999999999999975444


Q ss_pred             ecCCCC-CccccccccChhH--HHHHhHHhhhc
Q 035566          188 VGTSRR-TKGADYALENIHN--IREAFPELWDA  217 (238)
Q Consensus       188 v~~~~~-~~~ad~v~~~~~e--l~~~l~~~~~~  217 (238)
                      -+..++ +..|++++.+.++  +.+.|.+++.-
T Consensus       239 ~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~  271 (279)
T 3mpo_A          239 GNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN  271 (279)
T ss_dssp             ---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred             cCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence            333333 6779999998877  77777766543

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.71  E-value=5.9e-18  Score=133.17  Aligned_cols=110  Identities=12%  Similarity=0.142  Sum_probs=74.2

Q ss_pred             EEEecCChHHHHHHHHhcC--ccc-ccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566          106 VIFSNADEIHVAKVLRKLG--LED-CFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       106 ~i~t~~~~~~~~~~l~~~~--~~~-~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~  181 (238)
                      +++++ +......+.+.+.  +.+ .+..+.+... .....++..+...+..+++++|++++++++|||+.||++|++.+
T Consensus       185 i~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~a  263 (304)
T 3l7y_A          185 LTLQV-KEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLA  263 (304)
T ss_dssp             EEEEC-CGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHC
T ss_pred             EEEEc-CHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhc
Confidence            34444 3334445555442  333 3444443332 22222333456677778999999999999999999999999999


Q ss_pred             CCeEEEecCCCC--CccccccccChhH--HHHHhHHhhhc
Q 035566          182 GLHTVLVGTSRR--TKGADYALENIHN--IREAFPELWDA  217 (238)
Q Consensus       182 G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~~  217 (238)
                      |+. +.+.++.+  +..|++++.+.+|  +.+.|.+++..
T Consensus       264 g~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~  302 (304)
T 3l7y_A          264 KYS-YAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS  302 (304)
T ss_dssp             TEE-EECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred             CCe-EEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence            974 55555543  6779999999888  88888877653

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.71  E-value=1.2e-16  Score=124.62  Aligned_cols=109  Identities=12%  Similarity=0.159  Sum_probs=70.1

Q ss_pred             EEEecCChHHHHHHHHhcC--cccccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          106 VIFSNADEIHVAKVLRKLG--LEDCFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       106 ~i~t~~~~~~~~~~l~~~~--~~~~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      +++++.+......+.+.+.  +...+..+.+... .....++..+...+..+++.+|++++++++|||+.||++|++.+|
T Consensus       166 i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag  245 (285)
T 3pgv_A          166 VFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAG  245 (285)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred             EEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcC
Confidence            4666555554444444332  2222333333222 222223334567777789999999999999999999999999999


Q ss_pred             CeEEEecCCCC--Cccccc--cccChhH--HHHHhHHhh
Q 035566          183 LHTVLVGTSRR--TKGADY--ALENIHN--IREAFPELW  215 (238)
Q Consensus       183 ~~~i~v~~~~~--~~~ad~--v~~~~~e--l~~~l~~~~  215 (238)
                      + .+.+.++.+  +..|++  ++.+.+|  +...|.+++
T Consensus       246 ~-~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~  283 (285)
T 3pgv_A          246 K-GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY  283 (285)
T ss_dssp             E-EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred             C-EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence            6 455555543  556764  7777766  777777654

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.70  E-value=1.2e-16  Score=116.89  Aligned_cols=115  Identities=17%  Similarity=0.164  Sum_probs=83.8

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCcc
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTR  173 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~  173 (238)
                      +.+.|+....+.+++||++...+...++.+|+..+|+.         .||   +...+..+++++|++|+++++|||+.+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~---------~kp---k~~~~~~~~~~~g~~~~~~~~iGD~~~  128 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG---------QSN---KLIAFSDLLEKLAIAPENVAYVGDDLI  128 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS---------CSC---SHHHHHHHHHHHTCCGGGEEEEESSGG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC---------CCC---CHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            44455555566789999999999999999998766543         233   334444458999999999999999999


Q ss_pred             chhHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhcccc
Q 035566          174 NIECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDADEI  220 (238)
Q Consensus       174 di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~~~  220 (238)
                      |+.+++.+|+.+++.+.... ...|++++.+..+   +.+++..++...+.
T Consensus       129 Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~  179 (188)
T 2r8e_A          129 DWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGK  179 (188)
T ss_dssp             GHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCc
Confidence            99999999998765443322 5568999998732   33666666665543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.69  E-value=3.9e-18  Score=131.71  Aligned_cols=66  Identities=23%  Similarity=0.339  Sum_probs=55.7

Q ss_pred             chHHHHH-HHHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC----Cc--------cccccccChhHHHHHhH
Q 035566          147 QELQLIS-MLRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR----TK--------GADYALENIHNIREAFP  212 (238)
Q Consensus       147 ~~~~~~~-~~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~----~~--------~ad~v~~~~~el~~~l~  212 (238)
                      |++..++ +++++|++++++++|||+ .+|+.+|+.+|+++++|.++..    ..        .||++++++.||.+++.
T Consensus       188 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~  267 (268)
T 3qgm_A          188 PSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE  267 (268)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred             CCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence            3666555 589999999999999999 5999999999999999988763    12        68999999999988663

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.69  E-value=1.5e-16  Score=123.78  Aligned_cols=71  Identities=14%  Similarity=0.133  Sum_probs=58.1

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      ++..+...+..+++++|++++++++|||+.||++|++.+|+ ++.+.++.+  +..|++++.+.+|  +...|.++
T Consensus       208 ~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~-~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~  282 (283)
T 3dao_A          208 KGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGI-SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF  282 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC-EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence            33345677777899999999999999999999999999996 466655554  6789999999888  87777664

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.68  E-value=2.6e-17  Score=132.18  Aligned_cols=129  Identities=17%  Similarity=0.126  Sum_probs=105.3

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc--eeeecccCC-------CCCCCCCchHHHHHH
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLN-------PTNKTTGQELQLISM  154 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~-------~~k~~~~~~~~~~~~  154 (238)
                      .++++||+.++|+.|+.+   .+|+||++...+...++++|+..+|+  .++++++..       ..+|.+||.+.++..
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~  292 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence            457889999999998644   68999999999999999999999999  788776543       112223457777775


Q ss_pred             -HHhcC--------------CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---------CccccccccChhHHHHH
Q 035566          155 -LRMVA--------------HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---------TKGADYALENIHNIREA  210 (238)
Q Consensus       155 -~~~~~--------------~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---------~~~ad~v~~~~~el~~~  210 (238)
                       ++.+|              ++|++|++|||+.+|+.+|+++|+.+|++.++..         ..+||++++++.||.++
T Consensus       293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~  372 (384)
T 1qyi_A          293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGV  372 (384)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHH
T ss_pred             HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHH
Confidence             78888              8999999999999999999999999999987642         23789999999999987


Q ss_pred             hHHhh
Q 035566          211 FPELW  215 (238)
Q Consensus       211 l~~~~  215 (238)
                      +....
T Consensus       373 l~~~~  377 (384)
T 1qyi_A          373 LDNLL  377 (384)
T ss_dssp             HSCTT
T ss_pred             HHHHH
Confidence            75543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.67  E-value=2e-16  Score=121.52  Aligned_cols=71  Identities=15%  Similarity=0.210  Sum_probs=57.3

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      ++..+..++..+++++|++++++++|||+.||++|++.+|+.++ +.++.+  +..|++++.+.++  +.+.|.++
T Consensus       180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~na~~~~k~~A~~v~~~~~~dGva~~i~~~  254 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MGNAHEEVKRVADFVTKPVDKEGIWYGLKQL  254 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE-ETTCCHHHHHTCSEEECCGGGTHHHHHHHHT
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE-eCCCcHHHHHhCCEEeCCCCcchHHHHHHHh
Confidence            34456777888899999999999999999999999999998655 555443  6679999998877  77767654

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.48  E-value=4.9e-18  Score=130.79  Aligned_cols=111  Identities=15%  Similarity=0.233  Sum_probs=88.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      .+++||+.++|+.|+..   .+++||.+...+..+++.+|+..+|+.++         |    . ....+++.++.++++
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~---------p----~-~k~~~~~~l~~~~~~  200 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS---------P----E-DKVRIIEKLKQNGNK  200 (263)
Confidence            46889999999999765   46999999999999999999998888765         1    1 113457889999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCC-CCccccccc--cChhHHHHHhH
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSR-RTKGADYAL--ENIHNIREAFP  212 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~-~~~~ad~v~--~~~~el~~~l~  212 (238)
                      ++||||+.||+.+++.+|+...+.+... ....||+++  +++.+|.+++.
T Consensus       201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~  251 (263)
T 2yj3_A          201 VLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIK  251 (263)
Confidence            9999999999999999998654432211 256789999  89998877653

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.66  E-value=8.8e-16  Score=118.47  Aligned_cols=70  Identities=17%  Similarity=0.237  Sum_probs=56.4

Q ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          144 TTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      +..+...+..+++++|++++++++|||+.||++|++.+|+. +.+.++.+  +..|++++.+.+|  +...|.++
T Consensus       192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~  265 (268)
T 3r4c_A          192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGNASEKVQSVADFVTDTVDNSGLYKALKHF  265 (268)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence            33456777778999999999999999999999999999975 55555543  6679999999877  77766553

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.65  E-value=1.7e-17  Score=123.59  Aligned_cols=95  Identities=17%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecc---cCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE---SLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~---~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      .+.+++.++|+.|+.   +.+|+||++.......++.  +.++|+.++.+.   .....||    .+.++. +++++|+ 
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP----~p~~~~~~~~~~g~-  160 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKP----GQNTKSQWLQDKNI-  160 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCT----TCCCSHHHHHHTTE-
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCC----CHHHHHHHHHHCCC-
Confidence            356889999888864   4679999876655555555  556677653221   2333454    444444 5889988 


Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR  193 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~  193 (238)
                         |++|||+.+|+.+|+++|++++++.++..
T Consensus       161 ---~l~VGDs~~Di~aA~~aG~~~i~v~~g~~  189 (211)
T 2b82_A          161 ---RIFYGDSDNDITAARDVGARGIRILRASN  189 (211)
T ss_dssp             ---EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred             ---EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence               99999999999999999999999988753

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.63  E-value=1.4e-16  Score=122.55  Aligned_cols=67  Identities=16%  Similarity=0.315  Sum_probs=54.1

Q ss_pred             chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      +...+..+++++|++++++++|||+.||+.|++.+|+.+ .+.++.+  +..|++++.+..+  +.+.+.++
T Consensus       188 K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~  258 (261)
T 2rbk_A          188 KQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  258 (261)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceE-EecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence            445555568999999999999999999999999999854 4444433  5679999999999  98887653

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.63  E-value=3.9e-16  Score=111.68  Aligned_cols=112  Identities=16%  Similarity=0.135  Sum_probs=79.4

Q ss_pred             HHHHHhcCCCCeEEEecCChHHHHHHHH--hcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCC
Q 035566           94 LRNLLLSLPIRKVIFSNADEIHVAKVLR--KLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS  171 (238)
Q Consensus        94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~--~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~  171 (238)
                      ..+.|+....+.+|+|+.  ..+...++  .+|+. +    +.+     .++   +...+..+++++|++|+++++|||+
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~g-----~~~---K~~~l~~~~~~~gi~~~~~~~vGD~  108 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EVS-----VSD---KLATVDEWRKEMGLCWKEVAYLGNE  108 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----ECS-----CSC---HHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EEC-----CCC---hHHHHHHHHHHcCcChHHEEEEeCC
Confidence            345566666778899988  66777888  55543 2    211     122   3455666799999999999999999


Q ss_pred             ccchhHHHhcCCeEEEecCCCC--CccccccccChhH---HHHHhHHhhhccccc
Q 035566          172 TRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN---IREAFPELWDADEIS  221 (238)
Q Consensus       172 ~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e---l~~~l~~~~~~~~~~  221 (238)
                      .||+.|++.+|+.+ .+.++.+  +..|++++.+..+   +.+++..++...+..
T Consensus       109 ~nDi~~~~~ag~~~-a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~~~~~~  162 (168)
T 3ewi_A          109 VSDEECLKRVGLSA-VPADACSGAQKAVGYICKCSGGRGAIREFAEHIFLLIEKV  162 (168)
T ss_dssp             GGGHHHHHHSSEEE-ECTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHCCCEE-EeCChhHHHHHhCCEEeCCCCCccHHHHHHHHHHHhhhhh
Confidence            99999999999874 4555443  7789999987654   556666666655433

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.60  E-value=2.8e-15  Score=115.97  Aligned_cols=101  Identities=14%  Similarity=0.116  Sum_probs=69.7

Q ss_pred             HHHHHHhcC--cccccceeeeccc-CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          116 VAKVLRKLG--LEDCFDGIVNFES-LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       116 ~~~~l~~~~--~~~~f~~i~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ...+++.++  +...|+.+.+... .....++..+...+..+++.+|++++++++|||+.||+.|++.+|+. +.+.++.
T Consensus       158 ~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~  236 (271)
T 1rlm_A          158 IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNAA  236 (271)
T ss_dssp             HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTCC
T ss_pred             HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCe-EEeCCcc
Confidence            444555443  4445665554321 12222222345666667999999999999999999999999999985 5565554


Q ss_pred             C--CccccccccChhH--HHHHhHHhhhc
Q 035566          193 R--TKGADYALENIHN--IREAFPELWDA  217 (238)
Q Consensus       193 ~--~~~ad~v~~~~~e--l~~~l~~~~~~  217 (238)
                      +  +..|++++.+.++  +.+.|.+++..
T Consensus       237 ~~~k~~a~~v~~~~~~dGVa~~l~~~~~~  265 (271)
T 1rlm_A          237 ENIKQIARYATDDNNHEGALNVIQAVLDN  265 (271)
T ss_dssp             HHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred             HHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence            3  5679999999876  88888877653

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.55  E-value=8.6e-15  Score=119.62  Aligned_cols=92  Identities=21%  Similarity=0.211  Sum_probs=75.7

Q ss_pred             CChhHHHHHhcCCCC---eEEEecCC------------hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-
Q 035566           90 PDPVLRNLLLSLPIR---KVIFSNAD------------EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        90 ~~~~~~~~l~~l~~~---~~i~t~~~------------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-  153 (238)
                      ++||+.++|+.|+.+   .+|+||..            ...+...++.+|+.  |+.+++++.....||    .+.++. 
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP----~p~~~~~  161 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKP----VSGMWDH  161 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTT----SSHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCC----CHHHHHH
Confidence            679999999888644   67999965            22367788899985  899999888888886    666666 


Q ss_pred             HHHhcC----CCCCeEEEEeCCc-----------------cchhHHHhcCCeEEE
Q 035566          154 MLRMVA----HHFFQRLFFDDST-----------------RNIECGKSIGLHTVL  187 (238)
Q Consensus       154 ~~~~~~----~~~~~~v~vgD~~-----------------~di~~a~~~G~~~i~  187 (238)
                      +++.+|    ++|++|+||||+.                 .|+.+|+++|+.++.
T Consensus       162 a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~  216 (416)
T 3zvl_A          162 LQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT  216 (416)
T ss_dssp             HHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred             HHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence            488887    9999999999997                 799999999999874

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.52  E-value=3e-13  Score=106.02  Aligned_cols=75  Identities=12%  Similarity=0.093  Sum_probs=59.5

Q ss_pred             CCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc-ChhH--HHHHhHHhhh
Q 035566          142 NKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE-NIHN--IREAFPELWD  216 (238)
Q Consensus       142 k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~-~~~e--l~~~l~~~~~  216 (238)
                      .++..+...+..+++.+|++++++++|||+.||+.|++.+|+. +.++++.+  +..|++++. +..+  +.+.|.+++.
T Consensus       220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~  298 (301)
T 2b30_A          220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD  298 (301)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred             CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence            3444556777778999999999999999999999999999984 66766553  457899998 7655  8888877664


Q ss_pred             c
Q 035566          217 A  217 (238)
Q Consensus       217 ~  217 (238)
                      .
T Consensus       299 ~  299 (301)
T 2b30_A          299 L  299 (301)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.52  E-value=8.2e-14  Score=108.30  Aligned_cols=75  Identities=12%  Similarity=0.089  Sum_probs=59.1

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhhhcc
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELWDAD  218 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~~~  218 (238)
                      ++..+...+..+++.+|++++++++|||+.||+.|++.+|+ ++.+.++.+  +..|++++.+..+  +.++|.+++...
T Consensus       195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~  273 (282)
T 1rkq_A          195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNE  273 (282)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC-
T ss_pred             CCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcC
Confidence            34445677777899999999999999999999999999998 566765543  4568999988766  888887765433

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.51  E-value=2.9e-14  Score=111.18  Aligned_cols=71  Identities=14%  Similarity=0.135  Sum_probs=56.6

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      ++..+...+..+++.+|++++++++|||+.||+.|++.+|+ ++.+.++.+  +..|++++.+..+  +.+.|.++
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~  287 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL  287 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence            33345677777899999999999999999999999999998 677766554  4568999988776  66666543

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.50  E-value=5.4e-14  Score=105.81  Aligned_cols=69  Identities=10%  Similarity=0.114  Sum_probs=54.8

Q ss_pred             CCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          145 TGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      ..+...+..+++.+|++++++++|||+.||++|++.+|+. +.+.++.+  +..|++++.+..+  +.+.+.++
T Consensus       152 ~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~  224 (227)
T 1l6r_A          152 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANATDNIKAVSDFVSDYSYGEEIGQIFKHF  224 (227)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence            3456667777999999999999999999999999999985 66666543  4568999988755  76766654

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.47  E-value=1.4e-13  Score=105.14  Aligned_cols=95  Identities=16%  Similarity=0.067  Sum_probs=68.0

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCC---hHHHHHHHHhcCcc--cccceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNAD---EIHVAKVLRKLGLE--DCFDGIVNFESLNPTNKTTGQELQLISMLRMVA  159 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~---~~~~~~~l~~~~~~--~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~  159 (238)
                      .+++||+.++|+.|+.+   .+++||++   ...+...++.+|+.  .+|+.+++.+..  .|    +..  ...+...+
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K----~~~--~~~~~~~~  171 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KG----KEK--RRELVSQT  171 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CS----SHH--HHHHHHHH
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CC----cHH--HHHHHHhC
Confidence            56789999999888644   67999987   55677788889998  677777665532  22    233  22233333


Q ss_pred             CCCCeEEEEeCCccchhHHH-------h---------cCCeEEEecCCC
Q 035566          160 HHFFQRLFFDDSTRNIECGK-------S---------IGLHTVLVGTSR  192 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~-------~---------~G~~~i~v~~~~  192 (238)
                      .  +.+++|||+.+|+.+|.       +         +|+.++.++++.
T Consensus       172 ~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          172 H--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             E--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             C--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence            3  45899999999999983       4         799999998775

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.45  E-value=1.5e-13  Score=106.02  Aligned_cols=71  Identities=10%  Similarity=0.097  Sum_probs=55.0

Q ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhh
Q 035566          144 TTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELW  215 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~  215 (238)
                      +..+...+..+++.+|++++++++|||+.||+.|++.+|+. +.+.++.+  +..|++++.+..+  +.+.|.+++
T Consensus       188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~  262 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS  262 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCE-EEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence            33456667777999999999999999999999999999984 55554443  4568999988655  777776654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.44  E-value=8e-14  Score=106.99  Aligned_cols=72  Identities=13%  Similarity=0.033  Sum_probs=56.2

Q ss_pred             CCchHHHHHHHHhcCCCC--CeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhH--HHHHhHHhhhcc
Q 035566          145 TGQELQLISMLRMVAHHF--FQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHN--IREAFPELWDAD  218 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~--~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~e--l~~~l~~~~~~~  218 (238)
                      ..+...+..+++++|+++  +++++|||+.||+.|++.+|+. +.+.++.+ -.+++++.+..+  +.+.+..++.+.
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~~  250 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLPR  250 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHhC
Confidence            345666777799999998  9999999999999999999985 55555544 477788877555  777777776544

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.36  E-value=8.2e-13  Score=105.01  Aligned_cols=60  Identities=12%  Similarity=0.082  Sum_probs=46.3

Q ss_pred             CCCCCe----EEEEeCCccchhHHHhc----CCeEEEecCCCC-CccccccccC--hhHHHHHhHHhhhccc
Q 035566          159 AHHFFQ----RLFFDDSTRNIECGKSI----GLHTVLVGTSRR-TKGADYALEN--IHNIREAFPELWDADE  219 (238)
Q Consensus       159 ~~~~~~----~v~vgD~~~di~~a~~~----G~~~i~v~~~~~-~~~ad~v~~~--~~el~~~l~~~~~~~~  219 (238)
                      |+++++    +++|||+.||++|++.+    |+..++ +.... +..|++++.+  .+.+..+|.+++....
T Consensus       214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~  284 (332)
T 1y8a_A          214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFMERKE  284 (332)
T ss_dssp             HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHGG
T ss_pred             ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcCC
Confidence            677888    99999999999999999    997554 43322 5679999987  5558888877665444

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.30  E-value=2.3e-12  Score=102.61  Aligned_cols=53  Identities=15%  Similarity=0.203  Sum_probs=45.4

Q ss_pred             CCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-------CccccccccChhHHHHHhHH
Q 035566          161 HFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNIREAFPE  213 (238)
Q Consensus       161 ~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el~~~l~~  213 (238)
                      ++++++||||+. .||.+|+++||.+++|.++..       ...|+++++++.|+.+++.+
T Consensus       289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~pd~vi~~l~el~~~il~  349 (352)
T 3kc2_A          289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKECKPTLIVNDVFDAVTKTLE  349 (352)
T ss_dssp             TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCCTTCCCSEECSSHHHHHHHHHH
T ss_pred             CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcccccccCCCCEEECCHHHHHHHHHH
Confidence            679999999999 599999999999999988652       35689999999999887643

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.28  E-value=2.1e-12  Score=100.00  Aligned_cols=77  Identities=12%  Similarity=0.095  Sum_probs=42.5

Q ss_pred             CCCCCCCchHHHHHHHHhcC-CCCCe--EEEEeCCccchhHHHhcCCeEEEecCCC---C--Cc--ccc-ccccChhH--
Q 035566          140 PTNKTTGQELQLISMLRMVA-HHFFQ--RLFFDDSTRNIECGKSIGLHTVLVGTSR---R--TK--GAD-YALENIHN--  206 (238)
Q Consensus       140 ~~k~~~~~~~~~~~~~~~~~-~~~~~--~v~vgD~~~di~~a~~~G~~~i~v~~~~---~--~~--~ad-~v~~~~~e--  206 (238)
                      ...++..+...+..+++.+| +++++  +++|||+.||+.|++.+|+ ++.+.++.   .  +.  .|+ +++.+..+  
T Consensus       183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dG  261 (275)
T 1xvi_A          183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKGLNREGVHLHDEDPARVWRTQREGPEG  261 (275)
T ss_dssp             EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCCCC------------------------
T ss_pred             EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCc-eEEecCCCccchhhccccCCceeEccCCCchH
Confidence            33344456777777899999 99999  9999999999999999998 47776664   2  22  368 88877665  


Q ss_pred             HHHHhHHhhhc
Q 035566          207 IREAFPELWDA  217 (238)
Q Consensus       207 l~~~l~~~~~~  217 (238)
                      +.+.|.+++.+
T Consensus       262 Va~~l~~~l~~  272 (275)
T 1xvi_A          262 WREGLDHFFSA  272 (275)
T ss_dssp             -----------
T ss_pred             HHHHHHHHHHh
Confidence            77777776654

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.24  E-value=4e-11  Score=91.07  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=55.7

Q ss_pred             CCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cc-------cccccccChhH--HH
Q 035566          140 PTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TK-------GADYALENIHN--IR  208 (238)
Q Consensus       140 ~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~-------~ad~v~~~~~e--l~  208 (238)
                      ...++..+...+..+++.+|++++++++|||+.||+.|++.+|+ ++.++++.+  +.       .+++++.+..+  +.
T Consensus       156 i~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~-~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva  234 (244)
T 1s2o_A          156 LLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAIL  234 (244)
T ss_dssp             EEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHH
T ss_pred             eccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCc-EEEEcCCcHHHHHHHhcccccceeecCCcchhHHH
Confidence            33344456777777899999999999999999999999999998 466665543  33       27799988766  66


Q ss_pred             HHhHH
Q 035566          209 EAFPE  213 (238)
Q Consensus       209 ~~l~~  213 (238)
                      +.+.+
T Consensus       235 ~~i~~  239 (244)
T 1s2o_A          235 EAIAH  239 (244)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.22  E-value=4.6e-11  Score=91.06  Aligned_cols=61  Identities=8%  Similarity=-0.005  Sum_probs=49.3

Q ss_pred             CCchHHHHHHHHhcCC-CCCeEEEEeCCccchhHHHhcCCeEEEecCCC-C--CccccccccChhH
Q 035566          145 TGQELQLISMLRMVAH-HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR-R--TKGADYALENIHN  206 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~-~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~-~--~~~ad~v~~~~~e  206 (238)
                      ..+..++..+++.+|+ +++++++|||+.||++|++.+|+. +.++++. +  +..|++++++..+
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~~~~~~~~a~~v~~~~~~  242 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKHKKAQNVSSIIDVLEVI  242 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCCTTEEEESSHHHHHHHH
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCCccccchhceEEeccccc
Confidence            3457778888999998 999999999999999999999985 6665554 2  4568888877665

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.17  E-value=3.8e-11  Score=94.06  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=75.4

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHh--------cCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRK--------LGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~--------~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      .+++||+.++|+.|+.+   .+++||.+...   +...+++        +|+  +|+.+++++.. ..|    |++.++.
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~k----p~p~~~~  259 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTR----KDDVVKE  259 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCS----CHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCc----HHHHHHH
Confidence            45789999999988654   67999987543   3556767        888  48888876654 334    4777766


Q ss_pred             H-HHhcCCCCC-eEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          154 M-LRMVAHHFF-QRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       154 ~-~~~~~~~~~-~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      . +++++.++. .+++|||+.+|+.+|+++|+.+++|++|
T Consensus       260 ~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          260 EIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            4 688887764 4799999999999999999999999987

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.13  E-value=5.9e-11  Score=89.84  Aligned_cols=82  Identities=11%  Similarity=0.081  Sum_probs=57.1

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCCh----HHHHHHHHhcCcccccc-eeeecccCCCCCCCCCchHHHHHHHHhc
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADE----IHVAKVLRKLGLEDCFD-GIVNFESLNPTNKTTGQELQLISMLRMV  158 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~----~~~~~~l~~~~~~~~f~-~i~~~~~~~~~k~~~~~~~~~~~~~~~~  158 (238)
                      ..+++||+.++|+.|+.+   .+++||.+.    ..+...++.+|+..+++ .++.... .   +   .+...+..+...
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~---~---~K~~~r~~L~~~  171 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD-K---S---NKSVRFKQVEDM  171 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS-C---S---SSHHHHHHHHTT
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC-C---C---ChHHHHHHHHhc
Confidence            367889999999888644   679998755    47888899999987764 3333221 1   1   234455555554


Q ss_pred             CCCCCeEEEEeCCccchhH
Q 035566          159 AHHFFQRLFFDDSTRNIEC  177 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~  177 (238)
                      |.  +-+++|||+.+|+.+
T Consensus       172 gy--~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          172 GY--DIVLFVGDNLNDFGD  188 (260)
T ss_dssp             TC--EEEEEEESSGGGGCG
T ss_pred             CC--CEEEEECCChHHcCc
Confidence            54  449999999999887

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.10  E-value=6.9e-11  Score=89.57  Aligned_cols=81  Identities=7%  Similarity=0.054  Sum_probs=56.2

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCCh----HHHHHHHHhcCcccccc-eeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADE----IHVAKVLRKLGLEDCFD-GIVNFESLNPTNKTTGQELQLISMLRMVA  159 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~----~~~~~~l~~~~~~~~f~-~i~~~~~~~~~k~~~~~~~~~~~~~~~~~  159 (238)
                      .+++||+.++|+.|+.+   .+++||.+.    ..+...++.+|+..+++ .++.... .   +   .+...+..+...|
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-~---~---~K~~~r~~l~~~G  172 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD-K---S---AKAARFAEIEKQG  172 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS-C---S---CCHHHHHHHHHTT
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC-C---C---ChHHHHHHHHhcC
Confidence            57889999999888654   579998754    57788899999987663 3443322 1   1   2334444444445


Q ss_pred             CCCCeEEEEeCCccchhH
Q 035566          160 HHFFQRLFFDDSTRNIEC  177 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~  177 (238)
                      .  .-+++|||..+|+.+
T Consensus       173 y--~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          173 Y--EIVLYVGDNLDDFGN  188 (262)
T ss_dssp             E--EEEEEEESSGGGGCS
T ss_pred             C--CEEEEECCChHHhcc
Confidence            4  349999999999987

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=98.96  E-value=4e-09  Score=79.77  Aligned_cols=71  Identities=13%  Similarity=0.094  Sum_probs=55.3

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc--CCeEEEecCCCCCccccccccC---hhHHHHHhHH
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI--GLHTVLVGTSRRTKGADYALEN---IHNIREAFPE  213 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~--G~~~i~v~~~~~~~~ad~v~~~---~~el~~~l~~  213 (238)
                      ....++..|..++..+++.+|     +++|||+.||++|.+.+  |. ++.+.++  +..|++++.+   -+.+.+.|.+
T Consensus       153 ei~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~-~vam~Na--~~~A~~v~~~~~~~~gV~~~l~~  224 (239)
T 1u02_A          153 ELRVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDAL-TIKVGEG--ETHAKFHVADYIEMRKILKFIEM  224 (239)
T ss_dssp             EEECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSE-EEEESSS--CCCCSEEESSHHHHHHHHHHHHH
T ss_pred             EEEcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCc-EEEECCC--CCcceEEeCCCCCHHHHHHHHHH
Confidence            344455567788888899988     99999999999999999  97 5666555  5788999988   5668888877


Q ss_pred             hhhc
Q 035566          214 LWDA  217 (238)
Q Consensus       214 ~~~~  217 (238)
                      ++..
T Consensus       225 ~~~~  228 (239)
T 1u02_A          225 LGVQ  228 (239)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            6644

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.95  E-value=6.5e-09  Score=85.77  Aligned_cols=103  Identities=19%  Similarity=0.092  Sum_probs=72.8

Q ss_pred             CCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhc-C-------------cccccceeeecccCCCCC----C-----
Q 035566           89 KPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKL-G-------------LEDCFDGIVNFESLNPTN----K-----  143 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~-~-------------~~~~f~~i~~~~~~~~~k----~-----  143 (238)
                      .+.|.+..+|+.++.  +.+++||+....+..+++.+ |             +.++||.++.........    |     
T Consensus       246 ~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd  325 (555)
T 2jc9_A          246 VKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVD  325 (555)
T ss_dssp             CCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEE
T ss_pred             CCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEee
Confidence            445778888877753  56899999999999999887 6             457899866544211000    0     


Q ss_pred             ------------CCCch------HHHHHHHHhcCCCCCeEEEEeCCc-cchhHHH-hcCCeEEEecCC
Q 035566          144 ------------TTGQE------LQLISMLRMVAHHFFQRLFFDDST-RNIECGK-SIGLHTVLVGTS  191 (238)
Q Consensus       144 ------------~~~~~------~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~-~~G~~~i~v~~~  191 (238)
                                  +.-..      ..+..+++.+|..++++++|||+. .||..++ .+||.+++|-.-
T Consensus       326 ~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          326 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             TTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             cCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                        00000      013456788999999999999996 6688886 899999999663

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.90  E-value=1.4e-10  Score=84.76  Aligned_cols=95  Identities=13%  Similarity=0.040  Sum_probs=78.7

Q ss_pred             CCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           88 LKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +..+||+.++|+.++.  ..+|+|++...++..+++.++...+|+.+++.++....|      ..+.+.++.+|.++++|
T Consensus        67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k------~~~lK~L~~Lg~~~~~~  140 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR------GNYVKDLSRLGRELSKV  140 (195)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET------TEEECCGGGSSSCGGGE
T ss_pred             EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC------CceeeeHhHhCCChhHE
Confidence            4567999999988864  578999999999999999999999999988877655432      11333478999999999


Q ss_pred             EEEeCCccchhHHHhcCCeEEEe
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLV  188 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v  188 (238)
                      ++|||+..++.++..+|+.+..+
T Consensus       141 vivDDs~~~~~~~~~ngi~i~~~  163 (195)
T 2hhl_A          141 IIVDNSPASYIFHPENAVPVQSW  163 (195)
T ss_dssp             EEEESCGGGGTTCGGGEEECCCC
T ss_pred             EEEECCHHHhhhCccCccEEeee
Confidence            99999999999999999876443

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.81  E-value=4.1e-10  Score=81.37  Aligned_cols=92  Identities=14%  Similarity=0.076  Sum_probs=76.7

Q ss_pred             CCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           88 LKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +.++||+.++|+.++.  ..+|+|++...++..+++.++...+|+.+++.++....+      ..+.+.++.+|.++++|
T Consensus        54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k------~~~~k~L~~Lg~~~~~~  127 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR------GNYVKDLSRLGRDLRRV  127 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET------TEEECCGGGTCSCGGGE
T ss_pred             EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC------CcEeccHHHhCCCcceE
Confidence            4668999999988864  578999999999999999999999999988877654322      11233468899999999


Q ss_pred             EEEeCCccchhHHHhcCCeE
Q 035566          166 LFFDDSTRNIECGKSIGLHT  185 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~  185 (238)
                      ++|||+..++.++..+|+..
T Consensus       128 vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          128 LILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             EEECSCGGGGTTCTTSBCCC
T ss_pred             EEEeCCHHHhccCcCCEeEe
Confidence            99999999999999999974

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.64  E-value=3.4e-07  Score=71.39  Aligned_cols=95  Identities=12%  Similarity=0.079  Sum_probs=57.9

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeec----ccCC----CCCCCC---CchHHHH
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNF----ESLN----PTNKTT---GQELQLI  152 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~----~~~~----~~k~~~---~~~~~~~  152 (238)
                      ..++.||+.++++.++.   +.+++|++....+..+++.+|+......+++.    ++..    ...+..   .+.....
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~  218 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  218 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence            46778999998887754   46799999999999999999876322122211    1000    000100   1111122


Q ss_pred             HH--HHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566          153 SM--LRMVAHHFFQRLFFDDSTRNIECGKSI  181 (238)
Q Consensus       153 ~~--~~~~~~~~~~~v~vgD~~~di~~a~~~  181 (238)
                      +.  ...+.-..++++++||+.||+.|++.+
T Consensus       219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l  249 (297)
T 4fe3_A          219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGV  249 (297)
T ss_dssp             TCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred             HHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence            21  223333557899999999999997743

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.53  E-value=7.2e-07  Score=72.83  Aligned_cols=102  Identities=13%  Similarity=0.043  Sum_probs=69.5

Q ss_pred             CChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhc---------CcccccceeeecccC-----------------CC
Q 035566           90 PDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKL---------GLEDCFDGIVNFESL-----------------NP  140 (238)
Q Consensus        90 ~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~---------~~~~~f~~i~~~~~~-----------------~~  140 (238)
                      ..|.+...|+.++.   +.+++||++..++...+..+         .+.++||.|++....                 +.
T Consensus       187 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~  266 (470)
T 4g63_A          187 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT  266 (470)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCC
T ss_pred             CCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCc
Confidence            35777777777754   36899999999998888764         477899998765431                 00


Q ss_pred             -------CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCc-cch-hHHHhcCCeEEEecCC
Q 035566          141 -------TNKTTGQELQLISMLRMVAHHFFQRLFFDDST-RNI-ECGKSIGLHTVLVGTS  191 (238)
Q Consensus       141 -------~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~-~di-~~a~~~G~~~i~v~~~  191 (238)
                             .+++.=...-...+.+.+|....++++|||+. .|| .+-+..||.+++|-..
T Consensus       267 l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          267 MTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             EEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             ccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence                   00000001223445678899889999999996 564 5555689999999653

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.51  E-value=1.9e-07  Score=75.18  Aligned_cols=93  Identities=10%  Similarity=0.016  Sum_probs=58.0

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc--ceeeecc-----c------CCCCCCCCC---chH
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF--DGIVNFE-----S------LNPTNKTTG---QEL  149 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f--~~i~~~~-----~------~~~~k~~~~---~~~  149 (238)
                      .++|+++++++.|+.+   .+|+|++....++.+.+.+|+..-+  +.+++..     +      .....|...   +..
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~  300 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ  300 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence            3689999999988755   5799999999999999998764222  2232211     0      000001111   122


Q ss_pred             HHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          150 QLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       150 ~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      .+.++++. ......++++|||.+|+.|.+..+
T Consensus       301 ~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~  332 (385)
T 4gxt_A          301 TINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD  332 (385)
T ss_dssp             HHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred             HHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence            23333221 234456899999999999999854

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.43  E-value=7.2e-07  Score=76.73  Aligned_cols=108  Identities=12%  Similarity=0.171  Sum_probs=77.1

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|++.+.++.++..   .+++|+........+.+.+|++.++..+.         |  ..+....   +.+.-. +++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~---------P--~~K~~~v---~~l~~~-~~v  521 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------P--HQKSEEV---KKLQAK-EVV  521 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------T--TCHHHHH---HHHTTT-CCE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC---------H--HhHHHHH---HHHhhC-CeE
Confidence            4678888888877644   57999999999999999999874433221         1  1122222   333333 789


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHhH
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAFP  212 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l~  212 (238)
                      +||||+.||+.|++.+|+. +.++++.+  +..||+++  +++..+.+.+.
T Consensus       522 ~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          522 AFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             EEEECSSSCHHHHHHSSEE-EEECCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred             EEEeCCHhHHHHHHhCCEE-EEeCCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence            9999999999999999974 55544443  77899999  67888877663

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.31  E-value=1.8e-06  Score=75.25  Aligned_cols=108  Identities=12%  Similarity=0.171  Sum_probs=76.3

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.|++.+.++.++..   .+++|+........+.+.+|++..+..+.         |  ..+..+.   +.+.-. +++
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~---------P--~~K~~~v---~~l~~~-~~v  599 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------P--HQKSEEV---KKLQAK-EVV  599 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------T--TCHHHHH---HHHTTT-CCE
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC---------H--HHHHHHH---HHHhcC-CeE
Confidence            4668888888777644   57899999999999999999864332221         1  1122222   333323 789


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHhH
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAFP  212 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l~  212 (238)
                      +||||+.||+.|.+.+|+. +.++++..  +..||+++  +++..+.+.+.
T Consensus       600 ~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          600 AFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             EEEECSSTTHHHHHHSSEE-EECCCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred             EEEECChhhHHHHhhCCEE-EEeCCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence            9999999999999999974 55555443  77899999  67888777664

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.19  E-value=1.1e-06  Score=70.09  Aligned_cols=80  Identities=14%  Similarity=0.145  Sum_probs=60.2

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccc-eeeecccCCCCCCCCCchHHHHHHHHhc-CCCC
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFD-GIVNFESLNPTNKTTGQELQLISMLRMV-AHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~-~i~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~  162 (238)
                      +...||+.++|+.+...  .+|.|.+...++..+++.++... +|. .+++.+..+..         ..+-++.+ |.++
T Consensus        74 v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~---------~~KdL~~L~~~dl  144 (372)
T 3ef0_A           74 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL---------AQKSLRRLFPCDT  144 (372)
T ss_dssp             EEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSCS---------SCCCGGGTCSSCC
T ss_pred             EEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCCc---------ceecHHHhcCCCC
Confidence            56679999999998744  68999999999999999999887 787 56655543321         00113444 8899


Q ss_pred             CeEEEEeCCccchh
Q 035566          163 FQRLFFDDSTRNIE  176 (238)
Q Consensus       163 ~~~v~vgD~~~di~  176 (238)
                      +++++|+|++.-..
T Consensus       145 ~~viiiDd~~~~~~  158 (372)
T 3ef0_A          145 SMVVVIDDRGDVWD  158 (372)
T ss_dssp             TTEEEEESCSGGGT
T ss_pred             ceEEEEeCCHHHcC
Confidence            99999999986543

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.03  E-value=5e-06  Score=72.34  Aligned_cols=108  Identities=13%  Similarity=0.180  Sum_probs=74.0

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      ++.+++.+.++.++.   +.+++|+........+.+.+|+++++..+.         |  ..+..+   ++.+.-..+.+
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~---------P--~~K~~~---v~~l~~~g~~V  619 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIM---------P--EDKSRI---VSELKDKGLIV  619 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCC---------H--HHHHHH---HHHHHHHSCCE
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecC---------H--HHHHHH---HHHHHhcCCEE
Confidence            446788888877764   457999999999999999999875332221         1  012222   23333245679


Q ss_pred             EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHh
Q 035566          166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAF  211 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l  211 (238)
                      +||||+.||+.|.+.+|+. |.++++..  +..||+++  ++++.+.+.+
T Consensus       620 ~~vGDG~ND~paL~~AdvG-IAmg~g~d~a~~~AD~vl~~~~~~~i~~ai  668 (736)
T 3rfu_A          620 AMAGDGVNDAPALAKADIG-IAMGTGTDVAIESAGVTLLHGDLRGIAKAR  668 (736)
T ss_dssp             EEEECSSTTHHHHHHSSEE-EEESSSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred             EEEECChHhHHHHHhCCEE-EEeCCccHHHHHhCCEEEccCCHHHHHHHH
Confidence            9999999999999999974 55555543  66789888  4566666554

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.02  E-value=9.1e-06  Score=73.40  Aligned_cols=119  Identities=9%  Similarity=0.111  Sum_probs=77.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc----eeeecccCCCCCC----------------CC
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD----GIVNFESLNPTNK----------------TT  145 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~~k~----------------~~  145 (238)
                      ++.|++.+.++.++..   ..++|+.....+..+.+.+|+....+    .++.+......++                .+
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P  682 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP  682 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence            4568888888877644   57999999999999999999865321    1222211111100                00


Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      ..+..+.+.+++.   .+.+.|+||+.||+.|.+.+++. +.++++.+  +..+|+++.  ++..+...+
T Consensus       683 ~~K~~~v~~l~~~---g~~v~~~GDG~ND~~alk~Advg-iamg~g~~~ak~aAd~vl~~~~~~~i~~~i  748 (995)
T 3ar4_A          683 SHKSKIVEYLQSY---DEITAMTGDGVNDAPALKKAEIG-IAMGSGTAVAKTASEMVLADDNFSTIVAAV  748 (995)
T ss_dssp             SHHHHHHHHHHTT---TCCEEEEECSGGGHHHHHHSTEE-EEETTSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHC---CCEEEEEcCCchhHHHHHHCCeE-EEeCCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence            1233333333433   47899999999999999999985 55555443  567899884  577777655

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=97.84  E-value=7.1e-06  Score=62.65  Aligned_cols=64  Identities=11%  Similarity=0.015  Sum_probs=47.6

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecCCCC--CccccccccChh
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGTSRR--TKGADYALENIH  205 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~  205 (238)
                      ....++..|..++..+   +|++++++++|||    +.||++|.+.+|...+.+.++.+  +..|++++++.+
T Consensus       190 eI~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~  259 (262)
T 2fue_A          190 DVFPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA  259 (262)
T ss_dssp             EEEETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred             EEecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence            3344445567777666   8999999999999    99999999999987777765543  555677766544

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.74  E-value=0.00011  Score=57.76  Aligned_cols=35  Identities=23%  Similarity=0.040  Sum_probs=29.4

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL  123 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~  123 (238)
                      ..+|+++++++.++.+   .+|+|.++...++.+.+.+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            4689999999988755   5799999999999888874

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.65  E-value=3.3e-05  Score=58.40  Aligned_cols=47  Identities=15%  Similarity=-0.017  Sum_probs=35.2

Q ss_pred             CCCCCCCchHHHHHHHHhcCCCCCeEEEEeCC----ccchhHHHhcCCeEEEecC
Q 035566          140 PTNKTTGQELQLISMLRMVAHHFFQRLFFDDS----TRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       140 ~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~----~~di~~a~~~G~~~i~v~~  190 (238)
                      ...++..+..++..+++    +++++++|||+    .||++|.+.+|...+.|.+
T Consensus       181 I~~~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n  231 (246)
T 3f9r_A          181 VFPVGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS  231 (246)
T ss_dssp             EEETTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred             EEeCCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence            33344455666666666    88999999995    9999999998876666644

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.61  E-value=7e-05  Score=66.70  Aligned_cols=117  Identities=12%  Similarity=0.106  Sum_probs=75.6

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccc-ce---eeecc---------------c-CCCCCCCC
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCF-DG---IVNFE---------------S-LNPTNKTT  145 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f-~~---i~~~~---------------~-~~~~k~~~  145 (238)
                      ++.|++.+.++.++.   +..++|+........+.+.+|+.... +.   ++++.               . .....|  
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P--  612 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP--  612 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS--
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH--
Confidence            567899998888864   45799999999999999999985311 10   00000               0 001112  


Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      ..+..+.+.+++.|   +.+.|+||+.||..|.+.+++. |.++++..  +..||+++.  ++..+...+
T Consensus       613 ~~K~~iV~~Lq~~g---~~Vam~GDGvNDapaLk~AdvG-IAmg~gtd~ak~aADiVl~~~~~~~I~~ai  678 (920)
T 1mhs_A          613 QHKYNVVEILQQRG---YLVAMTGDGVNDAPSLKKADTG-IAVEGSSDAARSAADIVFLAPGLGAIIDAL  678 (920)
T ss_dssp             THHHHHHHHHHTTT---CCCEECCCCGGGHHHHHHSSEE-EEETTSCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred             HHHHHHHHHHHhCC---CeEEEEcCCcccHHHHHhCCcC-cccccccHHHHHhcCeEEcCCCHHHHHHHH
Confidence            23344444445444   6799999999999999999985 55555443  567888874  465555544

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=97.46  E-value=6.9e-05  Score=56.51  Aligned_cols=50  Identities=12%  Similarity=-0.002  Sum_probs=37.0

Q ss_pred             CCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecCCC
Q 035566          140 PTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       140 ~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ...++..|..++..+   +|++++++++|||    +.||++|.+.+|...+.++++.
T Consensus       182 I~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~  235 (246)
T 2amy_A          182 VFPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPE  235 (246)
T ss_dssp             EEETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHH
T ss_pred             EecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCC
Confidence            333444556666555   8999999999999    9999999999997677776654

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.45  E-value=0.00011  Score=49.45  Aligned_cols=17  Identities=29%  Similarity=0.382  Sum_probs=14.6

Q ss_pred             eeEEEEecCCceeeCcc
Q 035566            4 YECLLFDVDDTLYSHSY   20 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~   20 (238)
                      +|+|+||+||||+++..
T Consensus         1 ik~i~~DlDGTL~~~~~   17 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANT   17 (126)
T ss_dssp             CCEEEECSTTTTBCCCC
T ss_pred             CCEEEEecCCCCCCCCC
Confidence            58999999999998654

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.44  E-value=0.00023  Score=64.47  Aligned_cols=117  Identities=13%  Similarity=0.135  Sum_probs=74.4

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc------------------------ceeeecccCC--
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF------------------------DGIVNFESLN--  139 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f------------------------~~i~~~~~~~--  139 (238)
                      ++.|++.+.++.++..   .+++|+.....+..+.+.+|+...-                        ..++.+....  
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~  678 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL  678 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence            4568888888887644   5689999889999999999886210                        0111111100  


Q ss_pred             ------------------CCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Ccccc
Q 035566          140 ------------------PTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGAD  198 (238)
Q Consensus       140 ------------------~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad  198 (238)
                                        ...|  ..+..+.+.+++.|   +.+.++||+.||+.|.+.+++.. .++ ++.+  +..||
T Consensus       679 ~~~~l~~~~~~~~~~v~ar~~P--~~K~~iV~~lq~~g---~~V~~iGDG~ND~paLk~AdvGI-Amg~~gtd~ak~aAD  752 (1028)
T 2zxe_A          679 STEVLDDILHYHTEIVFARTSP--QQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGV-AMGISGSDVSKQAAD  752 (1028)
T ss_dssp             CHHHHHHHHHHCSEEEEESCCH--HHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEEE-EESSSCCHHHHHHCS
T ss_pred             CHHHHHHHHhhCCcEEEEEcCH--HHHHHHHHHHHhCC---CEEEEEcCCcchHHHHHhCCceE-EeCCccCHHHHHhcC
Confidence                              0111  11222333344444   57999999999999999999854 455 4543  56789


Q ss_pred             ccccC--hhHHHHHh
Q 035566          199 YALEN--IHNIREAF  211 (238)
Q Consensus       199 ~v~~~--~~el~~~l  211 (238)
                      +++.+  +..+.+.+
T Consensus       753 ~Vl~~~~~~~I~~~i  767 (1028)
T 2zxe_A          753 MILLDDNFASIVTGV  767 (1028)
T ss_dssp             EEETTCCTHHHHHHH
T ss_pred             EEecCCCHHHHHHHH
Confidence            88854  66666655

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.42  E-value=2.8e-05  Score=56.72  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=69.3

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-cccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      +...||+.++|+.+...  .+|.|++...++..+++.++.. .+|+..+..+.......      ...+-++.+|.++++
T Consensus        58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~g------~y~KdL~~Lgrdl~~  131 (204)
T 3qle_A           58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDG------VHIKDLSKLNRDLSK  131 (204)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEETT------EEECCGGGSCSCGGG
T ss_pred             EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEECC------eeeecHHHhCCChHH
Confidence            34569999999999854  6799999999999999999886 47877666554332111      122235788999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEE
Q 035566          165 RLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i  186 (238)
                      |++|+|+++...+....|+...
T Consensus       132 vIiIDDsp~~~~~~p~N~I~I~  153 (204)
T 3qle_A          132 VIIIDTDPNSYKLQPENAIPME  153 (204)
T ss_dssp             EEEEESCTTTTTTCGGGEEECC
T ss_pred             EEEEECCHHHHhhCccCceEee
Confidence            9999999999877666665443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.41  E-value=0.00036  Score=63.34  Aligned_cols=117  Identities=15%  Similarity=0.171  Sum_probs=72.5

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc------------------------eeeecccCC--
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD------------------------GIVNFESLN--  139 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~------------------------~i~~~~~~~--  139 (238)
                      ++.|++.+.++.++..   .+++|+.....+..+.+.+|+...-.                        .++......  
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~  683 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM  683 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence            5678888888888755   46899988888999999988742100                        011110000  


Q ss_pred             ------------------CCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Ccccc
Q 035566          140 ------------------PTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGAD  198 (238)
Q Consensus       140 ------------------~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad  198 (238)
                                        ...|  ..+..+.+.+++.|   +.++++||+.||+.|.+.+|+. |.++ ++.+  +..||
T Consensus       684 ~~~~l~~~~~~~~~~v~ar~~P--~~K~~iv~~lq~~g---~~V~a~GDG~ND~~mLk~A~vG-IAMg~ng~d~aK~aAD  757 (1034)
T 3ixz_A          684 DPSELVEALRTHPEMVFARTSP--QQKLVIVESCQRLG---AIVAVTGDGVNDSPALKKADIG-VAMGIAGSDAAKNAAD  757 (1034)
T ss_pred             CHHHHHHHHHhCCceEEEecCH--HHHHHHHHHHHHcC---CEEEEECCcHHhHHHHHHCCee-EEeCCccCHHHHHhcC
Confidence                              0001  01122333334433   5699999999999999999985 4444 4443  77899


Q ss_pred             ccccChh--HHHHHh
Q 035566          199 YALENIH--NIREAF  211 (238)
Q Consensus       199 ~v~~~~~--el~~~l  211 (238)
                      +++.+.+  .+...+
T Consensus       758 ~Vl~~~~~~gI~~ai  772 (1034)
T 3ixz_A          758 MILLDDNFASIVTGV  772 (1034)
T ss_pred             EEeccCCchHHHHHH
Confidence            9987643  344444

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.40  E-value=0.00011  Score=50.26  Aligned_cols=18  Identities=22%  Similarity=0.355  Sum_probs=15.1

Q ss_pred             CceeEEEEecCCceeeCc
Q 035566            2 TKYECLLFDVDDTLYSHS   19 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~   19 (238)
                      |++|+|+||+||||++..
T Consensus         1 m~~k~i~~DlDGTL~~~~   18 (142)
T 2obb_A            1 SNAMTIAVDFDGTIVEHR   18 (142)
T ss_dssp             -CCCEEEECCBTTTBCSC
T ss_pred             CCCeEEEEECcCCCCCCC
Confidence            457999999999999954

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=97.32  E-value=2.9e-05  Score=58.63  Aligned_cols=32  Identities=22%  Similarity=0.261  Sum_probs=26.6

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHH
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEE   32 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~   32 (238)
                      +|++|+|+||+||||++....+.....+++.+
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~   34 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQK   34 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred             CCCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence            35789999999999999877788888877766

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=97.23  E-value=0.00018  Score=54.84  Aligned_cols=31  Identities=23%  Similarity=0.268  Sum_probs=25.1

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHH
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEE   32 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~   32 (238)
                      +++|+|+||+||||++....+.....+++.+
T Consensus        11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~   41 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQK   41 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred             cCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence            3579999999999999877788888777766

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.18  E-value=0.00017  Score=64.20  Aligned_cols=116  Identities=10%  Similarity=0.062  Sum_probs=72.5

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccc-cc-eeeecccCC-------------------CCCCC
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDC-FD-GIVNFESLN-------------------PTNKT  144 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~-f~-~i~~~~~~~-------------------~~k~~  144 (238)
                      ++.|++.+.++.++.   +..++|+........+.+.+|+... ++ ..+...+.+                   ...| 
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P-  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP-  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH-
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH-
Confidence            457888888877754   4679999998899999999998531 11 111110000                   0111 


Q ss_pred             CCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccC--hhHHHHH
Q 035566          145 TGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALEN--IHNIREA  210 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~--~~el~~~  210 (238)
                       ..+..+.+.+++.|   +.+.|+||+.||..|.+.+++. +.++++..  +..+|+++.+  +..+.+.
T Consensus       567 -~~K~~iV~~lq~~g---~~Vam~GDGvNDapaLk~AdvG-IAmg~gtd~ak~aADivl~~~~~~~I~~a  631 (885)
T 3b8c_A          567 -EHKYEIVKKLQERK---HIVGMTGDGVNDAPALKKADIG-IAVADATDAARGASDIVLTEPGLSVIISA  631 (885)
T ss_dssp             -HHHHHHHHHHHHTT---CCCCBCCCSSTTHHHHHHSSSC-CCCSSSHHHHGGGCSSCCSSCSHHHHTHH
T ss_pred             -HHHHHHHHHHHHCC---CeEEEEcCCchhHHHHHhCCEe-EEeCCccHHHHHhcceeeccCchhHHHHH
Confidence             12233333444444   6789999999999999999985 44454433  5678888754  5555443

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.14  E-value=3.2e-05  Score=60.47  Aligned_cols=93  Identities=20%  Similarity=0.249  Sum_probs=59.7

Q ss_pred             ChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCccccc--ceeeeccc---CCC-CCCCCCchHHHHHHHHhc----
Q 035566           91 DPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCF--DGIVNFES---LNP-TNKTTGQELQLISMLRMV----  158 (238)
Q Consensus        91 ~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f--~~i~~~~~---~~~-~k~~~~~~~~~~~~~~~~----  158 (238)
                      .||+.++|+.+..  ..+|.|.+...++..+++.++....+  ...+..+.   ... .+..   .....+-++.+    
T Consensus       166 RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~---g~~~vKdLs~Lw~~~  242 (320)
T 3shq_A          166 RPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPER---GVVDVKPLGVIWALY  242 (320)
T ss_dssp             CTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTT---EEEEECCHHHHHHHC
T ss_pred             CCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCC---CCEEEEEhHHhhccc
Confidence            4889999988863  37899999999999999998876543  21111111   100 0000   00011123444    


Q ss_pred             -CCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566          159 -AHHFFQRLFFDDSTRNIECGKSIGLHTV  186 (238)
Q Consensus       159 -~~~~~~~v~vgD~~~di~~a~~~G~~~i  186 (238)
                       |.+++++++|+|++....+....|+...
T Consensus       243 p~rdl~~tIiIDdsp~~~~~~p~NgI~I~  271 (320)
T 3shq_A          243 KQYNSSNTIMFDDIRRNFLMNPKSGLKIR  271 (320)
T ss_dssp             TTCCGGGEEEEESCGGGGTTSGGGEEECC
T ss_pred             CCCChhHEEEEeCChHHhccCcCceEEeC
Confidence             7899999999999998877776665433

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=95.77  E-value=0.0041  Score=46.82  Aligned_cols=31  Identities=32%  Similarity=0.328  Sum_probs=26.7

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHH
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEE   32 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~   32 (238)
                      |++|+|+||+||||+++...+.....+++.+
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~   32 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKR   32 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHH
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHH
Confidence            3589999999999999888888888887766

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=95.60  E-value=0.096  Score=38.87  Aligned_cols=79  Identities=11%  Similarity=0.090  Sum_probs=58.6

Q ss_pred             eEEEecCChHHHHHHHHhcCcccccce--eeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          105 KVIFSNADEIHVAKVLRKLGLEDCFDG--IVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       105 ~~i~t~~~~~~~~~~l~~~~~~~~f~~--i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      .+++|++.-.....++=.+|+..+|+.  ++++...+       +..-+..+.+++| +...-++|||+...=++|+..+
T Consensus       179 NVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG-------KesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n  250 (274)
T 3geb_A          179 NVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG-------KESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHN  250 (274)
T ss_dssp             EEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC-------HHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTT
T ss_pred             EEEEecCchHHHHHHHHHhhcccceecccccchhhcC-------HHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHcC
Confidence            468888876655556666788888854  66655432       2455555688887 4578899999999999999999


Q ss_pred             CeEEEecCC
Q 035566          183 LHTVLVGTS  191 (238)
Q Consensus       183 ~~~i~v~~~  191 (238)
                      |+++-+...
T Consensus       251 ~PFwrI~~h  259 (274)
T 3geb_A          251 MPFWRISCH  259 (274)
T ss_dssp             CCEEECCSH
T ss_pred             CCeEEeecC
Confidence            999988653

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=93.68  E-value=0.15  Score=41.44  Aligned_cols=79  Identities=14%  Similarity=0.139  Sum_probs=58.2

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccce-eeecccCCCCCCCCCchHHHHHHHHh-cCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFDG-IVNFESLNPTNKTTGQELQLISMLRM-VAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~~-i~~~~~~~~~k~~~~~~~~~~~~~~~-~~~~~  162 (238)
                      +...||+.++|+.+...  .+|.|.+...++..+++.++... +|.. +++.+..+..-  .|       -+.+ +|.+.
T Consensus        82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~--~K-------dL~~ll~rdl  152 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLA--QK-------SLRRLFPCDT  152 (442)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCSS--CC-------CGGGTCSSCC
T ss_pred             EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCce--ee-------ehHHhcCCCc
Confidence            46679999999999754  68999999999999999998776 6765 55555433200  01       1233 48889


Q ss_pred             CeEEEEeCCccch
Q 035566          163 FQRLFFDDSTRNI  175 (238)
Q Consensus       163 ~~~v~vgD~~~di  175 (238)
                      +.+|+|+|++.-.
T Consensus       153 ~~vvIIDd~p~~~  165 (442)
T 3ef1_A          153 SMVVVIDDRGDVW  165 (442)
T ss_dssp             TTEEEEESCSGGG
T ss_pred             ceEEEEECCHHHh
Confidence            9999999998543

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=92.40  E-value=0.078  Score=42.56  Aligned_cols=28  Identities=25%  Similarity=0.312  Sum_probs=20.2

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHH
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEE   32 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~   32 (238)
                      +|.|+||+|||+++ .+..+....-++.+
T Consensus         1 ~~~~~fdvdgv~~~-~~~~~d~~~ltv~~   28 (384)
T 1qyi_A            1 MKKILFDVDGVFLS-EERCFDVSALTVYE   28 (384)
T ss_dssp             CCEEEECSBTTTBC-SHHHHHHHHHHHHH
T ss_pred             CceEEEecCceeec-hhhhccHHHHHHHH
Confidence            47899999999999 55555544444444

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=85.50  E-value=0.29  Score=35.22  Aligned_cols=16  Identities=31%  Similarity=0.688  Sum_probs=14.1

Q ss_pred             ceeEEEEecCCceeeC
Q 035566            3 KYECLLFDVDDTLYSH   18 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~   18 (238)
                      +.+++++|+||||+.+
T Consensus        27 ~k~~LVLDLD~TLvhs   42 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHS   42 (195)
T ss_dssp             TCCEEEECCBTTTEEE
T ss_pred             CCeEEEEccccceEcc
Confidence            3579999999999995

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=80.47  E-value=0.57  Score=33.18  Aligned_cols=16  Identities=25%  Similarity=0.588  Sum_probs=13.9

Q ss_pred             ceeEEEEecCCceeeC
Q 035566            3 KYECLLFDVDDTLYSH   18 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~   18 (238)
                      +.+.+++|+|+||+.+
T Consensus        14 ~k~~LVLDLD~TLvhs   29 (181)
T 2ght_A           14 DKICVVINLDETLVHS   29 (181)
T ss_dssp             TSCEEEECCBTTTEEE
T ss_pred             CCeEEEECCCCCeECC
Confidence            3579999999999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	238
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	5e-09
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	8e-08
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-07
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	4e-07
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	6e-07
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	8e-07
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	1e-06
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	6e-06
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	3e-05
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	3e-05
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	4e-05
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	6e-05
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-04
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	2e-04
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	4e-04
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	5e-04
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	9e-04
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	0.001
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	0.002

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 52.6 bits (124), Expect = 5e-09
 Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 18/222 (8%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           MT+++ + FD+D TL +     +   +  +++  + +           N     +     
Sbjct: 1   MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVD 60

Query: 61  AGLKAVGYDFDNDDYHSFVHGRLPY------ENLKPDPVLRNLLLSLPIRKVIFSNA--- 111
              K    +   D++  F      Y         +  P ++  L +L  +  I +     
Sbjct: 61  WACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNK 120

Query: 112 DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDS 171
              HV  +L   G++  F  ++         +          +      +  Q LF  DS
Sbjct: 121 PTKHVQPILTAFGIDHLFSEMLGG---QSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDS 177

Query: 172 TRNIECGKSIGLHTVLVGTSRRTK------GADYALENIHNI 207
             +I    S G   V +               D+  ++  +I
Sbjct: 178 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 49.1 bits (115), Expect = 8e-08
 Identities = 27/227 (11%), Positives = 69/227 (30%), Gaps = 20/227 (8%)

Query: 4   YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL 63
           ++ ++FD D  L       S   +  +E  ++ + G   S   E           ++   
Sbjct: 2   FDLIIFDCDGVLVD-----SEIIAAQVESRLLTEAGYPISV-EEMGERFAGMTWKNILLQ 55

Query: 64  KAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSL----PIRKVIFSNADEIHVAKV 119
                             +L    L+ D  + + +          + I SN+    +  +
Sbjct: 56  VESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMM 115

Query: 120 LRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGK 179
           L K+GL+  F   +        ++   +    +           + +  +DS   I   +
Sbjct: 116 LTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGAR 175

Query: 180 SIGLHTVLVGTSRRTK----------GADYALENIHNIREAFPELWD 216
           + G+  +    +  T           GA+  +  + ++      + +
Sbjct: 176 AAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAE 222

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 2e-07
 Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 29/227 (12%)

Query: 7   LLFDVDDTLY-SHSYGFSNKCSK--NIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM--- 60
             FD+D  L      G   +  +   +    +      E       +++      S    
Sbjct: 3   AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62

Query: 61  -------AGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSL-------PIRKV 106
                     KA G +   +   S +  +        +  +    ++L        I   
Sbjct: 63  LMDESYRKSSKACGANLPENFSISQIFSQA-MAARSINRPMLQAAIALKKKGFTTCIVTN 121

Query: 107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL 166
            + +  +   +       L   FD ++    +            L+  L+       + +
Sbjct: 122 NWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK---AKPNEVV 178

Query: 167 FFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPE 213
           F DD   N++  + +G+ T+LV     T  A   LE +   +  FPE
Sbjct: 179 FLDDFGSNLKPARDMGMVTILV---HNTASALRELEKVTGTQ--FPE 220

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 4e-07
 Identities = 31/224 (13%), Positives = 60/224 (26%), Gaps = 31/224 (13%)

Query: 7   LLFDVDDTLY---------------SHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRV 51
            +FD+D  L                +   G  N   +           ++          
Sbjct: 5   AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIP 64

Query: 52  LYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSL-------PIR 104
           L +      +    V    +      F          K +  +    L L        I 
Sbjct: 65  LMEENCRKCSETAKVCLPKNFSIKEIFDKA---ISARKINRPMLQAALMLRKKGFTTAIL 121

Query: 105 KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164
              + +              L+  FD ++    +            L+  L+        
Sbjct: 122 TNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV-- 179

Query: 165 RLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIR 208
            +F DD   N++  + +G+ T+LV   + T  A   LE +  I+
Sbjct: 180 -VFLDDIGANLKPARDLGMVTILV---QDTDTALKELEKVTGIQ 219

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 46.8 bits (109), Expect = 6e-07
 Identities = 21/220 (9%), Positives = 61/220 (27%), Gaps = 13/220 (5%)

Query: 4   YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL 63
           ++ +LFD+D  +       + +      + + +++GI   +     ++   +   S+  +
Sbjct: 2   FKAVLFDLDGVITD-----TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKI 56

Query: 64  KAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKL 123
             +     + +    +  R     +K    +    +   I +++           +    
Sbjct: 57  LDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS 116

Query: 124 GLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR-------LFFDDSTRNIE 176
                    +N            +         +               +  +DS   I+
Sbjct: 117 KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQ 176

Query: 177 CGKSIGLHTVLVGTSRRTKGADYALENIHNIR-EAFPELW 215
             K  G   + VG           + +  +   E   E+W
Sbjct: 177 AIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW 216

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 46.0 bits (107), Expect = 8e-07
 Identities = 23/217 (10%), Positives = 58/217 (26%), Gaps = 14/217 (6%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           MT    + FD+D TL       S+    N   Y  ++LG+   +       +     +S 
Sbjct: 1   MTSITAIFFDLDGTLVD-----SSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSF 55

Query: 61  AGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVL 120
           A   +     +    +   +        +  P + +    L      +            
Sbjct: 56  ATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIID---LLEELSSSYPLYITTTKDTST 112

Query: 121 RKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKS 180
            +   ++             + +   +   +   L+       Q +   D+  ++   + 
Sbjct: 113 AQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE 172

Query: 181 IGLHTVLVGTSRRTK------GADYALENIHNIREAF 211
            G+  + +      +        DY       +   F
Sbjct: 173 TGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 8/185 (4%)

Query: 8   LFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLG---IEESEVSEFNRVLYKNYGTSMAGLK 64
           +FD+ + +    +        ++    +  L           +  R    +   + A   
Sbjct: 4   IFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCH 63

Query: 65  AVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKL- 123
            +      + +                  + + L     R V+ SN + +H      +  
Sbjct: 64  EMALPLSYEQFSHGWQAVFV-ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 122

Query: 124 GLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGL 183
            + D  D I   + L            ++             +FFDD+  NIE    +G+
Sbjct: 123 EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT---VFFDDNADNIEGANQLGI 179

Query: 184 HTVLV 188
            ++LV
Sbjct: 180 TSILV 184

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 43.3 bits (100), Expect = 6e-06
 Identities = 28/213 (13%), Positives = 63/213 (29%), Gaps = 11/213 (5%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
            Y+ L+FD+D TL +     S      +   ++   G   S  ++  +        +M  
Sbjct: 2   TYQALMFDIDGTLTN-----SQPAYTTVMREVLATYGKPFSP-AQAQKTFPMAAEQAMTE 55

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
           L     +FD+            Y+ ++  P + +L   LP    +     +         
Sbjct: 56  LGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGM 115

Query: 123 LGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG 182
                     V   + +   +       L ++ ++         F  DS  + +  ++  
Sbjct: 116 RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNAL-FIGDSVSDEQTAQAAN 174

Query: 183 LHTVLVGTSRRTK----GADYALENIHNIREAF 211
           +   L               +  +   +I E F
Sbjct: 175 VDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 207

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.7 bits (96), Expect = 3e-05
 Identities = 28/231 (12%), Positives = 61/231 (26%), Gaps = 26/231 (11%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCS---KNIEEYMIQKLGIEESE-------------VS 46
            Y   L D++ T+   S+            + + + Q                     + 
Sbjct: 2   NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQ 61

Query: 47  EFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP---YENLKPDPVLRNLLLSLPI 103
                L           +  GY + +      +   +     + +K    +         
Sbjct: 62  AHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVK 121

Query: 104 RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF 163
            + +     +   A     L L    DG  +  +     +T         +LR +     
Sbjct: 122 AQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYAN----ILRDIGAKAS 177

Query: 164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214
           + LF  D+   ++    +G+ T L     R   A       + + + F  L
Sbjct: 178 EVLFLSDNPLELDAAAGVGIATGLA---SRPGNAPVPDGQKYQVYKNFETL 225

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 3e-05
 Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 3/122 (2%)

Query: 94  LRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS 153
                    ++  I+S+        +       D  + +         +K   +      
Sbjct: 135 AVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKV--ESESYRK 192

Query: 154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPE 213
           +   +       LF  D TR     +   +H  +V         D        I  +F E
Sbjct: 193 IADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI-TSFSE 251

Query: 214 LW 215
           L+
Sbjct: 252 LY 253

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 41.0 bits (94), Expect = 4e-05
 Identities = 21/207 (10%), Positives = 55/207 (26%), Gaps = 9/207 (4%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV 66
            ++D+D TL       S +   +  E    +  I   +      +   +    +  +   
Sbjct: 4   FIWDLDGTLLD-----SYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAED 58

Query: 67  GYDFDND-DYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGL 125
                   +             +   P  R +L       +                  L
Sbjct: 59  RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDL 118

Query: 126 EDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHT 185
                      S +   +    E     + +    +     +  D T ++E  ++ G+ +
Sbjct: 119 GVESYFTEILTSQSGFVRKPSPEAATYLLDKY-QLNSDNTYYIGDRTLDVEFAQNSGIQS 177

Query: 186 VLVGTSRRTKGADYALENIHNIREAFP 212
           +    S  T   ++ ++ + +I   F 
Sbjct: 178 INFLES--TYEGNHRIQALADISRIFE 202

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.0 bits (94), Expect = 6e-05
 Identities = 22/238 (9%), Positives = 66/238 (27%), Gaps = 24/238 (10%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV------SEFNRVLYK 54
           +++   + FD+D+TL   +        + I+    +    EE+E+       + ++  + 
Sbjct: 3   LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFH 62

Query: 55  NYGTSMAG---------LKAVGYDFDNDDYHS---FVHGRLPYENLKPDPVLRNLLLSLP 102
            Y T +           ++      DN        F+      +++     ++ +L  L 
Sbjct: 63  PYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELR 122

Query: 103 IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162
               +    +     +  +                     +     +       +     
Sbjct: 123 KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG 182

Query: 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR------RTKGADYALENIHNIREAFPEL 214
              +  D    +I+ G + GL   +            +    Y + ++  +      +
Sbjct: 183 DCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI 240

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (91), Expect = 1e-04
 Identities = 27/215 (12%), Positives = 61/215 (28%), Gaps = 15/215 (6%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           +    +FD+D  L       S       E  ++  LG++ S  +E    L       +  
Sbjct: 2   QILAAIFDMDGLLID-----SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL 56

Query: 63  LKAVGYDFDND-----DYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVA 117
             A             +        L  E     P +R  +     + ++   A    + 
Sbjct: 57  WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH 116

Query: 118 KVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIEC 177
            + + L + D  D      S      +       +     +       +  +DS   +  
Sbjct: 117 MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIA 176

Query: 178 GKSIGLHTVLVGTSRRTK-----GADYALENIHNI 207
            K+  + +++V             A+  L ++  +
Sbjct: 177 SKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 39.1 bits (89), Expect = 2e-04
 Identities = 29/233 (12%), Positives = 75/233 (32%), Gaps = 23/233 (9%)

Query: 1   MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM 60
           M +   + FD   TL     G +    K +EE ++    +    + +    L +   ++ 
Sbjct: 1   MIR--AVFFDFVGTLL-SVEGEAKTHLKIMEE-VLGDYPLNPKTLLDEYEKLTREAFSNY 56

Query: 61  AG-------------LKAVGYDFDNDDYHSF--VHGRLPYENLKPDPVLRNLLLSLPIRK 105
           AG             ++ +   +      +F  +H R+     +  P +  +L SL  + 
Sbjct: 57  AGKPYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKY 116

Query: 106 VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165
            +    D      +     L           S           +  +++ +         
Sbjct: 117 HVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176

Query: 166 LFFDDSTRNIECGKSIGLHTVLVGTSRRTK----GADYALENIHNIREAFPEL 214
              D+  ++    K++G+ ++L+      +      D+ + ++  + +   EL
Sbjct: 177 YVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 37.8 bits (86), Expect = 4e-04
 Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 12/193 (6%)

Query: 3   KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG 62
           KY   ++D+  TL       + + S       +   GI +       + L  +   ++  
Sbjct: 2   KYHDYIWDLGGTLLD-----NYETSTAAFVETLALYGITQDHD-SVYQALKVSTPFAIET 55

Query: 63  LKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK 122
                 +F      +        E+      + +LL  +  +          +   +   
Sbjct: 56  FAPNLENFLEKYKENEAR---ELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEIL 112

Query: 123 LGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG 182
                         S +   +    E  L    +         L   D   +IE G++ G
Sbjct: 113 EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS---SGLVIGDRPIDIEAGQAAG 169

Query: 183 LHTVLVGTSRRTK 195
           L T L  +    +
Sbjct: 170 LDTHLFTSIVNLR 182

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 37.8 bits (86), Expect = 5e-04
 Identities = 30/227 (13%), Positives = 66/227 (29%), Gaps = 24/227 (10%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV 66
           +LFD+D TL           ++ +    + ++   E      +     +       L  V
Sbjct: 5   VLFDIDGTLLK-----VESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNV 59

Query: 67  GYDFD---------NDDYHSFVHGRLPYENLKPDP----VLRNLLLSLPIRKVIFSNADE 113
           G +            + Y +    R   E++        +L  L     +   + +   E
Sbjct: 60  GLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFE 119

Query: 114 IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTR 173
                 L+  G++  F      +     N+     L+    +    +   Q +   D+  
Sbjct: 120 ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH 179

Query: 174 NIECGKSIGLHTVLVGTSRRTK------GADYALENIHNIREAFPEL 214
           +I C + +   ++ V T   T             +N     E    +
Sbjct: 180 DIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 226

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 37.1 bits (84), Expect = 9e-04
 Identities = 18/232 (7%), Positives = 56/232 (24%), Gaps = 16/232 (6%)

Query: 3   KYECLLFDVDDTLY-SHSYGFSNKCSKNIEEYMI-----QKLGIEESEVSEFNRVLYKNY 56
           K E ++F    T      +       +   +  +     +          +  R L +  
Sbjct: 1   KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMP 60

Query: 57  GTSMAGLKAVGYDFDNDDYHSFVHGRLPY------ENLKPDPVLRNLLL---SLPIRKVI 107
             +    +         D                     P   ++ ++       I+   
Sbjct: 61  RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGS 120

Query: 108 FSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLF 167
            +      +  V ++      +         +         +   + + +  +     + 
Sbjct: 121 TTGYTREMMDIVAKEAA-LQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIK 179

Query: 168 FDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADE 219
             D+  +++ G++ G+ TV V       G         +  E   ++     
Sbjct: 180 VGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRN 231

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 36.8 bits (83), Expect = 0.001
 Identities = 28/220 (12%), Positives = 63/220 (28%), Gaps = 19/220 (8%)

Query: 7   LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRV----------LYKNY 56
           + FD+  TL+   +    +C +       +   +   +  E+  +               
Sbjct: 5   IAFDLYGTLF-DVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATE 63

Query: 57  GTSMAGLKAVGYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHV 116
                  + +G D D     +     L        P     L    ++  I SN     +
Sbjct: 64  DALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSI 123

Query: 117 AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIE 176
             V+   GL D FD +++ + +                L +         F   +  +  
Sbjct: 124 DAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL---FVASNAWDAT 180

Query: 177 CGKSIGLHTVLVGTSRRT-----KGADYALENIHNIREAF 211
             +  G  T  +  +        +  D+ + ++  + E F
Sbjct: 181 GARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELF 220

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 20/160 (12%)

Query: 60  MAGL-KAVGYDFDN------------DDYHSFVHGRLP---YENLKPDPVLRNLLLSLPI 103
           M  L K   +D D               +H    G +     +N++  P +  +L  L  
Sbjct: 1   MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS 60

Query: 104 RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF 163
             V  + A      +   +L              + P +K T        +       F 
Sbjct: 61  LGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVT----HFERLHHKTGVPFS 116

Query: 164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALEN 203
           Q +FFDD  RNI     +G+  + +      +     LE 
Sbjct: 117 QMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	238
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.97
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.96
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.96
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.95
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.95
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.95
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.95
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.95
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.95
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.94
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.94
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.93
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.93
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.92
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.89
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.85
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.85
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.83
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.82
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.8
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.78
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.78
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.77
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.76
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.76
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.75
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.74
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.74
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.74
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.72
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.71
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.67
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.64
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.53
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.53
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.5
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.49
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.47
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.43
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.4
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.39
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.34
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.22
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.17
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	99.08
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.93
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.87
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.85
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.85
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.82
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.72
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.7
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.7
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.29
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	98.03
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.73
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	95.34
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	94.96
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	91.08
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	80.72

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.97  E-value=4e-30  Score=190.08  Aligned_cols=193  Identities=15%  Similarity=0.201  Sum_probs=141.0

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh-hhhccCC-CChHhHH---
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG-LKAVGYD-FDNDDYH---   76 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~---   76 (238)
                      |++|+|+||+||||+|+.+.+..++..     +++++|.+.....     ..+.++..... +...+.. ...+.+.   
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQ-----AQKTFPMAAEQAMTELGIAASEFDHFQAQY   70 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHH-----HHHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhcchhhhhhhccccchhhHHHHHHHh
Confidence            459999999999999976555555543     5667787654432     22222322221 1111111 1112222   


Q ss_pred             -HhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           77 -SFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        77 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                       +.+...  ...++++||+.++|+.++.+  .+++||+....+...++++|+..+|+.++++++.+..||    .+.++.
T Consensus        71 ~~~~~~~--~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~p~~~~  144 (207)
T d2hdoa1          71 EDVMASH--YDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKP----DPLPLL  144 (207)
T ss_dssp             HHHHTTC--GGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTT----SSHHHH
T ss_pred             hhhhccc--ccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccchh----hhhhhc
Confidence             222221  23567899999999999765  569999999999999999999999999999998888876    555555


Q ss_pred             -HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHH
Q 035566          154 -MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREA  210 (238)
Q Consensus       154 -~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~  210 (238)
                       +++++|++|++|++|||+.+|+.+|+++|+.++++.+|..    ..++++++.++.||.++
T Consensus       145 ~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l  206 (207)
T d2hdoa1         145 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL  206 (207)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred             ccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence             5899999999999999999999999999999999976653    55789999999888664

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.96  E-value=2e-30  Score=192.02  Aligned_cols=195  Identities=18%  Similarity=0.255  Sum_probs=139.2

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCC-CC----hHhH
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYD-FD----NDDY   75 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~   75 (238)
                      |.+||+|+||+||||+|+...+..++.+     .++++|++......+..    ..+............ ..    .+.+
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTIRG----FMGPPLESSFATCLSKDQISEAVQIY   71 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHHHH----TSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----hhhcchhhhccccccchhhHHHHHHH
Confidence            8899999999999999976655555553     45567776554433322    112222111110000 00    1112


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      ........ .....+++++.++|+.++.+  .+++||++.......++++|+..+|+.++++...+.      +++.++.
T Consensus        72 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~------~~p~~~~  144 (210)
T d2ah5a1          72 RSYYKAKG-IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAP------HKADVIH  144 (210)
T ss_dssp             HHHHHHTG-GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCC------SHHHHHH
T ss_pred             HHHHHhhh-hhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccccccc------ccccccc
Confidence            22222212 13457789999999988544  689999999999999999999999999998876542      2444455


Q ss_pred             -HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          154 -MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       154 -~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                       +++++|++|+++++|||+.+|+.+|+++|+++++|.+|..      ..+||++++++.||.+++
T Consensus       145 ~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l  209 (210)
T d2ah5a1         145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             hhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence             5899999999999999999999999999999999987653      456999999999998865

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.96  E-value=6.4e-30  Score=190.97  Aligned_cols=201  Identities=15%  Similarity=0.202  Sum_probs=140.3

Q ss_pred             CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhc----cchh-hhhhccCCCChHh-
Q 035566            1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYG----TSMA-GLKAVGYDFDNDD-   74 (238)
Q Consensus         1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~-   74 (238)
                      |+++|+|+||+||||+|+.+.+..++.+     .++++|.+......+.........    .... ............. 
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEF   75 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHH
Confidence            8899999999999999975555555543     556677654433222211100000    0000 0000011111111 


Q ss_pred             ------HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           75 ------YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        75 ------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                            ....... .......++|++.++|+.|+..   .+++||++...+..+++.+|+..+|+.+++++..+..||  
T Consensus        76 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp--  152 (224)
T d2hsza1          76 KYFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKP--  152 (224)
T ss_dssp             HHHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTT--
T ss_pred             HHHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccc--
Confidence                  1111111 1123467889999999888644   579999999999999999999999999999998888886  


Q ss_pred             CchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566          146 GQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF  211 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l  211 (238)
                        .+.++. ++++++++|+++++|||+.+|+.+|+++|+.+|+++++..      ..+||++++++.||.+++
T Consensus       153 --~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii  223 (224)
T d2hsza1         153 --HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  223 (224)
T ss_dssp             --SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             --cchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence              555555 5899999999999999999999999999999999987652      456899999999998876

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.6e-28  Score=182.78  Aligned_cols=191  Identities=15%  Similarity=0.153  Sum_probs=133.6

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhcc-CCCChHhHH
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVG-YDFDNDDYH   76 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~   76 (238)
                      +|++++||+||||+|+.+.+..++.+     +++++|++......+.    ...+......     .... .......+.
T Consensus         2 ~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNELP----DTLGLRIDMVVDLWYARQPWNGPSRQEVV   72 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGSC----CCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred             cceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHH----HHhCCCccchhhhhhhcccccchhHHHHH
Confidence            68999999999999954433334432     5566777654422111    1111111100     0000 111111111


Q ss_pred             H----hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566           77 S----FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL  149 (238)
Q Consensus        77 ~----~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~  149 (238)
                      +    .....+. ...+++||+.++|+.|+.+   .+++||++...+...++++|+.++|+.++++++.+..||    .+
T Consensus        73 ~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp----~~  147 (218)
T d1te2a_          73 ERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKP----HP  147 (218)
T ss_dssp             HHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTT----ST
T ss_pred             HHHHHHHHHhhh-ccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchh----hH
Confidence            1    1111111 2345789999999888654   579999999999999999999999999999998888876    66


Q ss_pred             HHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHH
Q 035566          150 QLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNI  207 (238)
Q Consensus       150 ~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el  207 (238)
                      .++.. ++++|++|+++++|||+.+|+.+|+++|+++|+|+.+..     ...|+++++++.||
T Consensus       148 ~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el  211 (218)
T d1te2a_         148 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL  211 (218)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred             HHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence            66664 899999999999999999999999999999999977643     45789999999997

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=2.3e-28  Score=182.40  Aligned_cols=198  Identities=14%  Similarity=0.192  Sum_probs=138.5

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChH---hH
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDND---DY   75 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~   75 (238)
                      +|+|+||+||||+|+......++.+     +++++|++........ .+   .|......     ...+.....+   .+
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGE-RF---AGMTWKNILLQVESEASIPLSASLLDKS   72 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHHH-HH---TTCCHHHHHHHHHHHHCCCCCTHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHH-HH---hhhccccccccccccccccccccchhHH
Confidence            6899999999999965544444443     5666787654322111 11   12211111     1111222211   11


Q ss_pred             HHhhhCCCCCCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeec-cc--CCCCCCCCCchHHHH
Q 035566           76 HSFVHGRLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNF-ES--LNPTNKTTGQELQLI  152 (238)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~-~~--~~~~k~~~~~~~~~~  152 (238)
                      ...+.... .....++||+.++|+.++.+++++|++....+...++++++..+|+.++++ +.  ....||    .+.++
T Consensus        73 ~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP----~~~~~  147 (222)
T d2fdra1          73 EKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKP----KPDIF  147 (222)
T ss_dssp             HHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTT----SSHHH
T ss_pred             HHHHHHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeeccccccccccccc----CHHHH
Confidence            11111111 124678899999999999999999999999999999999999999986554 33  344554    55555


Q ss_pred             H-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----------CccccccccChhHHHHHhHHhh
Q 035566          153 S-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       153 ~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      . .++++|++|++|++|||+..|+.+|+++|+++|++.++..          ..+|+++++++.||..+|..+.
T Consensus       148 ~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~  221 (222)
T d2fdra1         148 LHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA  221 (222)
T ss_dssp             HHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred             HHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence            5 5899999999999999999999999999999999987752          2359999999999999887754

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.95  E-value=1.7e-28  Score=183.90  Aligned_cols=203  Identities=18%  Similarity=0.201  Sum_probs=138.5

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhH---------HHHHHHHHHHhhccchhhhhhccCCCChHh
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESE---------VSEFNRVLYKNYGTSMAGLKAVGYDFDNDD   74 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (238)
                      .|+|+||+||||+++......++.+++.+    ..+.....         .......+....+........ ......+.
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   76 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIE----VYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIAD-KFDKAKET   76 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHH----HHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHH-HHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHH----HcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHH-HHHHHHHH
Confidence            58999999999999766666666554443    22322111         111112222222222211111 00001122


Q ss_pred             HHHhhhCCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566           75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ  150 (238)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~  150 (238)
                      +...+.........+++||+.++|+.|+.+    .+++||+....+...++.+|+..+|+.++++++....||    .+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~----~p~  152 (228)
T d2hcfa1          77 YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNE----LPH  152 (228)
T ss_dssp             HHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGG----HHH
T ss_pred             HHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccc----hhH
Confidence            333333333334567899999999998643    458999999999999999999999999998887766665    444


Q ss_pred             H-HHHHHhc---CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566          151 L-ISMLRMV---AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELW  215 (238)
Q Consensus       151 ~-~~~~~~~---~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~  215 (238)
                      + +..+..+   +++|++|+||||+.+|+.+|+.+|+++|+|.+|..      ..+||++++++.||.++|..+.
T Consensus       153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~  227 (228)
T d2hcfa1         153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL  227 (228)
T ss_dssp             HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred             HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence            3 3344444   78999999999999999999999999999987652      4579999999999999988764

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=9.3e-28  Score=181.86  Aligned_cols=129  Identities=12%  Similarity=0.160  Sum_probs=109.5

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      ...++|++.++|+.|++.  .+++||++...+...++.+|+..+|+.++++++.+..||    .+.++.. ++++|++|+
T Consensus       107 ~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----~p~~~~~~~~~~~~~~~  182 (247)
T d2gfha1         107 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKP----APSIFYHCCDLLGVQPG  182 (247)
T ss_dssp             TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTT----CHHHHHHHHHHHTCCGG
T ss_pred             cCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccccccchh----hhhhHHHHHHHhhcCHH
Confidence            467899999999988754  578999999999999999999999999999999888886    7777775 899999999


Q ss_pred             eEEEEeCCc-cchhHHHhcCCeEEE-ecCCC-----CCccccccccChhHHHHHhHHhhhccc
Q 035566          164 QRLFFDDST-RNIECGKSIGLHTVL-VGTSR-----RTKGADYALENIHNIREAFPELWDADE  219 (238)
Q Consensus       164 ~~v~vgD~~-~di~~a~~~G~~~i~-v~~~~-----~~~~ad~v~~~~~el~~~l~~~~~~~~  219 (238)
                      +|++|||+. +|+.+|+++|++++. ++...     ....|++++.++.||.++|.++-.+..
T Consensus       183 ~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i~~~~~  245 (247)
T d2gfha1         183 DCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSIDCKVS  245 (247)
T ss_dssp             GEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHTTCCE
T ss_pred             hcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHHhhhcc
Confidence            999999996 789999999998664 43333     145689999999999999988765543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.95  E-value=4.6e-28  Score=181.75  Aligned_cols=123  Identities=17%  Similarity=0.284  Sum_probs=109.3

Q ss_pred             CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~  164 (238)
                      ..++||+.++|+.|+.+  .+++||++...+...++.+|+.++|+.++++++.+..||    .+.+|.. ++++|++|++
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~l~~~p~~  174 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKP----HPRIFELALKKAGVKGEE  174 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTT----SHHHHHHHHHHHTCCGGG
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccccch----hhHHHHHHHhhhcccccc
Confidence            56789999999998754  579999999999999999999999999999998888886    7777776 8999999999


Q ss_pred             EEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHHh
Q 035566          165 RLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       165 ~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~~  214 (238)
                      |++|||+. +|+.+|+++|+.+++++++..    ..++|+++.++.||.++|.++
T Consensus       175 ~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l  229 (230)
T d1x42a1         175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL  229 (230)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred             cceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence            99999985 789999999999999976553    457899999999999998875

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.95  E-value=7.5e-28  Score=177.33  Aligned_cols=192  Identities=14%  Similarity=0.207  Sum_probs=134.0

Q ss_pred             eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh---ccCCCChH---hHHH
Q 035566            4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA---VGYDFDND---DYHS   77 (238)
Q Consensus         4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~   77 (238)
                      .++++||+||||+|+.+.+..++.+     +++++|++...... ...+.   +........   .......+   .+..
T Consensus         1 ~~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (204)
T d2go7a1           1 KTAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKV-REFIF---KYSVQDLLVRVAEDRNLDVEVLNQVRA   71 (204)
T ss_dssp             CCEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHH-HHHHH---HSCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             CEEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHH-HHhhc---ccccccccccccchhhhhHHHHHHHHH
Confidence            3689999999999976655555553     55667776443211 11111   111111100   01112222   2222


Q ss_pred             hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-
Q 035566           78 FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-  153 (238)
                      ...... .....++||+.++|+.|+.+   .+|+||+.. ....+++++|+.++|+.+++++.....||    .+.++. 
T Consensus        72 ~~~~~~-~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp----~~~~~~~  145 (204)
T d2go7a1          72 QSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKP----SPEAATY  145 (204)
T ss_dssp             HHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTT----SSHHHHH
T ss_pred             HHHHhh-cccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccch----hHHHHHH
Confidence            222222 23467889999999988654   579998775 55678999999999999999998888887    555555 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhH
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFP  212 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~  212 (238)
                      +++++|++|++|++|||+.+|+.+|+.+|+++|++.++.  ..+++.+.++.++.++++
T Consensus       146 ~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~~~~~~~~~~dl~~l~~  202 (204)
T d2go7a1         146 LLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YEGNHRIQALADISRIFE  202 (204)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CTTEEECSSTTHHHHHTS
T ss_pred             HHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CCcCeecCCHHHHHHHhc
Confidence            589999999999999999999999999999999998764  568888999999987764

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.94  E-value=3.7e-27  Score=179.65  Aligned_cols=124  Identities=14%  Similarity=0.142  Sum_probs=106.1

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHH-HHHHHHhcCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQ-LISMLRMVAHH  161 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~  161 (238)
                      ...++||+.++|+.|+.+   .+|+||++...+...++++|+..+| |.++++++....||    .+. +...++++|+.
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP----~p~~~~~~~~~l~~~  172 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRP----YPWMCYKNAMELGVY  172 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTT----SSHHHHHHHHHHTCC
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccccccc----ChHHHHHHHHHhCCC
Confidence            457899999999998755   5799999999999999999999987 77888888888876    555 44569999995


Q ss_pred             -CCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHHh
Q 035566          162 -FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREAF  211 (238)
Q Consensus       162 -~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~l  211 (238)
                       +++|+||||+.+|+.+|+++|+.+|+|.+|..                             ..+||++++++.||..+|
T Consensus       173 p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii  252 (257)
T d1swva_         173 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM  252 (257)
T ss_dssp             SGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred             CcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHH
Confidence             59999999999999999999999999988742                             234999999999999998


Q ss_pred             HHh
Q 035566          212 PEL  214 (238)
Q Consensus       212 ~~~  214 (238)
                      .++
T Consensus       253 ~~~  255 (257)
T d1swva_         253 EHI  255 (257)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.94  E-value=4.4e-26  Score=172.20  Aligned_cols=124  Identities=15%  Similarity=0.266  Sum_probs=109.0

Q ss_pred             CCCCChhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCe
Q 035566           87 NLKPDPVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQ  164 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~  164 (238)
                      ...++|++.+.|+.++.. .+++||+....+...++..++..+||.++++++.+..||    .+++|.. ++++|++|++
T Consensus        91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP----~p~~f~~a~~~lg~~p~e  166 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKP----HPDSYALVEEVLGVTPAE  166 (245)
T ss_dssp             SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----SHHHHHHHHHHHCCCGGG
T ss_pred             ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhcccccccccccccccccccCc----cHHHHHHHHHHhCCChhh
Confidence            467889999999998754 678999999999999999999999999999999998887    7788775 8999999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCC----------------------------CccccccccChhHHHHHhHHh
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR----------------------------TKGADYALENIHNIREAFPEL  214 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~----------------------------~~~ad~v~~~~~el~~~l~~~  214 (238)
                      |++|||+.+|+.+|+++||++|+|++...                            ...||++++++.||.+++..+
T Consensus       167 ~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~  244 (245)
T d1qq5a_         167 VLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM  244 (245)
T ss_dssp             EEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred             EEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence            99999999999999999999999976430                            346999999999999988653

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.93  E-value=1.2e-26  Score=172.92  Aligned_cols=199  Identities=15%  Similarity=0.195  Sum_probs=129.1

Q ss_pred             ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHh-hccchh----hhhh-ccCCCChHhH-
Q 035566            3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKN-YGTSMA----GLKA-VGYDFDNDDY-   75 (238)
Q Consensus         3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~-~~~~~~~~~~-   75 (238)
                      |+|+|+||+||||+|+...+..++.+     ++..+|++.....     +... .+....    .+.. .......+.+ 
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFK   70 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHH-----HHTTTTTCCHHHHHHHHHTTSSSCCCHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHH-----HHHHHhhccchhhhhhccccccccchhhhhh
Confidence            48999999999999954444444443     5566676543311     1111 111111    0100 0112222221 


Q ss_pred             ------HHhhhCCC-CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566           76 ------HSFVHGRL-PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT  145 (238)
Q Consensus        76 ------~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~  145 (238)
                            .+.+.... ......++||+.++|+.++..   .+++||+  ......++.+|+.++|+.++++++.+..||  
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP--  146 (221)
T d1o08a_          71 ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKP--  146 (221)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTT--
T ss_pred             hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeec--chhhHHHHhhcccccccccccccccccccc--
Confidence                  11111111 113457889999999888744   4566665  446788999999999999999998888886  


Q ss_pred             CchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHH-HHHhHHhhhc
Q 035566          146 GQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNI-REAFPELWDA  217 (238)
Q Consensus       146 ~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el-~~~l~~~~~~  217 (238)
                        .+.+++ +++++|++|++|++|||+.+|+.+|+++|+++|+|+++.....++.+++++.++ .+.+.++|.+
T Consensus       147 --~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~~~  218 (221)
T d1o08a_         147 --APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWLQ  218 (221)
T ss_dssp             --STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHHS
T ss_pred             --ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHHHHh
Confidence              666666 589999999999999999999999999999999998876545555555665552 2335555544

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.93  E-value=1.9e-25  Score=166.04  Aligned_cols=119  Identities=16%  Similarity=0.276  Sum_probs=104.0

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF  163 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~  163 (238)
                      ..+++++.++++.++.   +.+++||+........++..++..+||.++++++.+..||    .+.+|.. ++++|++|+
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP----~p~~~~~~~~~~g~~p~  167 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKP----DNRVYELAEQALGLDRS  167 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTT----SHHHHHHHHHHHTSCGG
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeecccc----HHHHHHHHHHHhCCCCc
Confidence            4667888888877753   4689999999999999999999999999999999988886    7777775 899999999


Q ss_pred             eEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHH
Q 035566          164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREA  210 (238)
Q Consensus       164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~  210 (238)
                      +|+||||+..|+.+|+++||++|+++++..     ...||++++++.||.++
T Consensus       168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l  219 (220)
T d1zrna_         168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL  219 (220)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred             eEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence            999999999999999999999999976542     45589999999999875

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=2e-25  Score=162.03  Aligned_cols=172  Identities=17%  Similarity=0.188  Sum_probs=116.4

Q ss_pred             CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-hcc--CCCChHhHHHh
Q 035566            2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-AVG--YDFDNDDYHSF   78 (238)
Q Consensus         2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~   78 (238)
                      |++|+|+||+||||+|+...+..++.+     +++.+|++.....     .+...+....... ...  .....+.+.+.
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDS-----VYQALKVSTPFAIETFAPNLENFLEKYKEN   70 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHHH-----HHhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence            569999999999999965544444442     5667787754422     1111122111111 111  11112223332


Q ss_pred             hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-H
Q 035566           79 VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-M  154 (238)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~  154 (238)
                      .....  ....++||+.++|+.++.+   .+++||+..... ..++++++.++|+.++++++....||    .+.++. +
T Consensus        71 ~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP----~p~~~~~~  143 (187)
T d2fi1a1          71 EAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKP----NPESMLYL  143 (187)
T ss_dssp             HHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTT----SCHHHHHH
T ss_pred             HHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCC----CHHHHHHH
Confidence            22222  3457889999999877644   679998776554 57999999999999999988888776    555555 4


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++++++  +++++|||+..|+.+|+++|+++++++++.
T Consensus       144 ~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~  179 (187)
T d2fi1a1         144 REKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIV  179 (187)
T ss_dssp             HHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             HHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            788886  459999999999999999999999997643

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.5e-24  Score=160.03  Aligned_cols=118  Identities=10%  Similarity=0.023  Sum_probs=97.1

Q ss_pred             CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeec-ccCCCCCCCCCchHHHHHH-HHhcCC
Q 035566           86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNF-ESLNPTNKTTGQELQLISM-LRMVAH  160 (238)
Q Consensus        86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~-~~~~~~k~~~~~~~~~~~~-~~~~~~  160 (238)
                      ....++||+.++|+.|+.+   .+++||++.......++..|+.++|+..... +.....||    .+.++.. ++++|+
T Consensus       124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP----~p~~~~~~~~~~~~  199 (253)
T d1zs9a1         124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKV----ESESYRKIADSIGC  199 (253)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTT----CHHHHHHHHHHHTS
T ss_pred             cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCC----CcHHHHHHHHHhCC
Confidence            3467899999999988544   6799999999999999999999988875543 44445555    7777775 899999


Q ss_pred             CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHH
Q 035566          161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNI  207 (238)
Q Consensus       161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el  207 (238)
                      +|++|+||||+.+|+.+|+++||++|+|+++..      ...++.+++|+.||
T Consensus       200 ~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         200 STNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             CcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            999999999999999999999999999976432      34567889998886

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=4.2e-21  Score=142.51  Aligned_cols=115  Identities=15%  Similarity=0.183  Sum_probs=87.3

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEecCChHHHHHH-----------HHhcCcccccceeeecccCCCCCCCCCchHHHHHH-
Q 035566           87 NLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKV-----------LRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-  154 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~-----------l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-  154 (238)
                      ...+++++.+++..++.. .+.++.........           ++.+|+.++|+.+++++... .||    .+.+|.. 
T Consensus        95 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~-~KP----~p~~f~~~  168 (225)
T d2g80a1          95 KAPVYADAIDFIKRKKRV-FIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-KKT----ETQSYANI  168 (225)
T ss_dssp             CBCCCHHHHHHHHHCSCE-EEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC-CTT----CHHHHHHH
T ss_pred             cccchhhHHHHHhhHHhh-hhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC-CCC----ChhHhHHH
Confidence            346789999998876654 45566555443333           34568889999998876544 455    7887775 


Q ss_pred             HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHH
Q 035566          155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNI  207 (238)
Q Consensus       155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el  207 (238)
                      ++++|++|++|+||||+.+|+.+|+++||++|+++++..    ...+..++.++.||
T Consensus       169 ~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         169 LRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  225 (225)
T ss_dssp             HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             HHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence            899999999999999999999999999999999976542    33455678888774

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=7.1e-22  Score=146.62  Aligned_cols=101  Identities=17%  Similarity=0.217  Sum_probs=85.6

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecC----ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNA----DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVA  159 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~----~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~  159 (238)
                      ..++|++.++|..|+.+   .+++||+    ........+...++.++||.+++++..+..||    .+.+|.. +++++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP----~p~~~~~~~~~~~  171 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKP----EPQIYNFLLDTLK  171 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTT----CHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCC----ChHHHHHHHHHhC
Confidence            56789999999988654   5688874    33455666778899999999999998888886    7777775 89999


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|++|+||||+..|+.+|+.+||++|+|.++.
T Consensus       172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             SCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred             CCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence            999999999999999999999999999998765

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.5e-21  Score=140.34  Aligned_cols=101  Identities=19%  Similarity=0.179  Sum_probs=83.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChH----HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEI----HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVA  159 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~----~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~  159 (238)
                      ..++|++.++|..++.+   .+++||+...    .........++.++||.++++++.+..||    .+.+|+. ++.+|
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~~  173 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKP----EPQIYKFLLDTLK  173 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTT----CHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchh----HHHHHHHHhhhcc
Confidence            46789999999888644   5789986543    33344455678889999999998988887    7777775 89999


Q ss_pred             CCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|+++++|||+..|+.+|+++|+++|+++++.
T Consensus       174 ~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~  206 (225)
T d1zd3a1         174 ASPSEVVFLDDIGANLKPARDLGMVTILVQDTD  206 (225)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred             cCccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence            999999999999999999999999999997643

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=5.2e-21  Score=135.46  Aligned_cols=97  Identities=20%  Similarity=0.232  Sum_probs=78.9

Q ss_pred             CCCCChhHHHHHhcCCCC---eEEEecCCh-HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566           87 NLKPDPVLRNLLLSLPIR---KVIFSNADE-IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH  161 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~-~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~  161 (238)
                      .+.++||+.++|+.|+.+   .+++|++.. ......++++++..+|+.+....     +|    .+..+. +++++|++
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----kp----~~~~~~~~~~~~~~~  114 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP-----GS----KVTHFERLHHKTGVP  114 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESS-----SC----HHHHHHHHHHHHCCC
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeeccc-----CC----ChHHHHHHHHHhCCC
Confidence            467899999999988755   578997765 45667789999988888775432     33    555555 58999999


Q ss_pred             CCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      |++++||||+..|+++|+++|+.+|+|.+|.
T Consensus       115 ~~~~l~igD~~~di~aA~~aG~~~i~v~~G~  145 (164)
T d1u7pa_         115 FSQMVFFDDENRNIIDVGRLGVTCIHIRDGM  145 (164)
T ss_dssp             GGGEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred             hHHEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999999999999999998874

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=6.3e-21  Score=138.28  Aligned_cols=101  Identities=23%  Similarity=0.342  Sum_probs=84.2

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhc-CcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKL-GLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF  162 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~-~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~  162 (238)
                      ..+++++.+++..++.   ..+++||+........+... ++..+|+.+++++..+..||    .+.+++. ++++|++|
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp----~~~~~~~~~~~~~~~~  158 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKP----EARIYQHVLQAEGFSP  158 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTT----CHHHHHHHHHHHTCCG
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeeccccccccc----chHHHHHHHHhcCCCC
Confidence            4567888888777653   35788888777666666665 78899999999998988887    7777775 89999999


Q ss_pred             CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ++|++|||+.+|+++|+++|+++|+++++.
T Consensus       159 ~~~l~vgDs~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         159 SDTVFFDDNADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             CeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            999999999999999999999999997654

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=5.1e-19  Score=127.13  Aligned_cols=119  Identities=15%  Similarity=0.205  Sum_probs=83.1

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChH---------------HHHHHHHhcCcccccceeeeccc------------
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEI---------------HVAKVLRKLGLEDCFDGIVNFES------------  137 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~---------------~~~~~l~~~~~~~~f~~i~~~~~------------  137 (238)
                      +.++||+.++|+.|+.+   .+++||.+..               .....+...+..  ++.+..+..            
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~cp~~p~~~~~~~~~~  103 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV  103 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc--ccceeeccccccccccccccc
Confidence            45678999988888654   5799997531               112222333332  333333322            


Q ss_pred             CCCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC-----CccccccccChhHHHHH
Q 035566          138 LNPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR-----TKGADYALENIHNIREA  210 (238)
Q Consensus       138 ~~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~-----~~~ad~v~~~~~el~~~  210 (238)
                      ....||    .++++. +++++++++++++||||+.+|+++|+++|+.+ +++.++..     ...||++++++.|+.++
T Consensus       104 ~~~rKP----~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~  179 (182)
T d2gmwa1         104 CDCRKP----HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA  179 (182)
T ss_dssp             CSSSTT----SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred             ccccCC----ccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence            223444    555554 58999999999999999999999999999965 67776653     34599999999999988


Q ss_pred             hH
Q 035566          211 FP  212 (238)
Q Consensus       211 l~  212 (238)
                      |.
T Consensus       180 ik  181 (182)
T d2gmwa1         180 IK  181 (182)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.78  E-value=1.7e-19  Score=134.13  Aligned_cols=134  Identities=11%  Similarity=0.046  Sum_probs=93.5

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccce---eeecccC-------CCCCCCCCchHHHHH
Q 035566           87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDG---IVNFESL-------NPTNKTTGQELQLIS  153 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~---i~~~~~~-------~~~k~~~~~~~~~~~  153 (238)
                      .++++|++.++++.|+.   ..+++|++....++.+++++|+..+|..   .+..+..       ........+......
T Consensus        73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  152 (226)
T d2feaa1          73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS  152 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence            35688999999988864   4689999999999999999988776532   1111111       000011122333556


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC----CCccccccccChhHHHHHhHHhhhccccc
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR----RTKGADYALENIHNIREAFPELWDADEIS  221 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~----~~~~ad~v~~~~~el~~~l~~~~~~~~~~  221 (238)
                      +++.+++++++++|||||.+|+.||+.+|+.. .+.+..    +...+...+.++.|+...++.+.+..++.
T Consensus       153 ~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~-a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~  223 (226)
T d2feaa1         153 VIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF-ARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL  223 (226)
T ss_dssp             HHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE-ECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred             HHHHhcCCCceEEEEeCchhhHHHHHHCCEEE-EecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999743 333321    13445667899999998888776655443

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7.3e-20  Score=138.28  Aligned_cols=73  Identities=19%  Similarity=0.231  Sum_probs=57.3

Q ss_pred             eeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCcc-chhHHHhcCCeEEEecCCCC--------Cccccccc
Q 035566          132 IVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDSTR-NIECGKSIGLHTVLVGTSRR--------TKGADYAL  201 (238)
Q Consensus       132 i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~-di~~a~~~G~~~i~v~~~~~--------~~~ad~v~  201 (238)
                      ....+.....||    .+.++.. ++++|++|++|+||||+++ ||.+|+++||++|+|.+|..        ..+||+++
T Consensus       166 ~~~~~~~~~~KP----~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~  241 (250)
T d2c4na1         166 ISGRKPFYVGKP----SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY  241 (250)
T ss_dssp             HHCCCCEECSTT----STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred             hhcccchhcccc----hhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEE
Confidence            333343444555    6666664 8999999999999999975 99999999999999987752        34579999


Q ss_pred             cChhHHH
Q 035566          202 ENIHNIR  208 (238)
Q Consensus       202 ~~~~el~  208 (238)
                      +++.||.
T Consensus       242 ~sl~eL~  248 (250)
T d2c4na1         242 PSVAEID  248 (250)
T ss_dssp             SSGGGCC
T ss_pred             CCHHHhC
Confidence            9999974

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.76  E-value=4.9e-19  Score=129.38  Aligned_cols=116  Identities=15%  Similarity=0.202  Sum_probs=78.7

Q ss_pred             CCCChhHHHHHhcCCC---CeEEEecCCh---------------HHHHHHHHhcCcccccceeeecccC-----------
Q 035566           88 LKPDPVLRNLLLSLPI---RKVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNFESL-----------  138 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~---~~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~~~~-----------  138 (238)
                      +.++||+.++|+.|+.   +.+|+||.+.               ..+...+...|.  +++.++.+...           
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~  124 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAGVGPLAIPD  124 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTCCSTTCCSS
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccccccccccc
Confidence            4567899999888864   4679998431               122233334343  24555444321           


Q ss_pred             -CCCCCCCCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHH
Q 035566          139 -NPTNKTTGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIRE  209 (238)
Q Consensus       139 -~~~k~~~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~  209 (238)
                       ...||    .++++. +++++|+++++++||||+.+|+++|+++|++++++.++.....+++.+.++.++.+
T Consensus       125 ~~~rKP----~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e  193 (209)
T d2o2xa1         125 HPMRKP----NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE  193 (209)
T ss_dssp             CTTSTT----SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH
T ss_pred             cccccc----cchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhH
Confidence             12344    555555 58999999999999999999999999999999999888765556665555444433

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.76  E-value=7.1e-19  Score=128.83  Aligned_cols=123  Identities=19%  Similarity=0.222  Sum_probs=84.7

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC-------CCCCCCCCchHHHHHHHHh
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL-------NPTNKTTGQELQLISMLRM  157 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~-------~~~k~~~~~~~~~~~~~~~  157 (238)
                      ..+++++.+.++.+...   .+++|++.........+..+...++......+..       ....+...+...+...++.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  153 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHH
Confidence            46678888888777544   5688888888888888888777665443332221       1111111233444456899


Q ss_pred             cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccC--hhHHHHHh
Q 035566          158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALEN--IHNIREAF  211 (238)
Q Consensus       158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~--~~el~~~l  211 (238)
                      ++++++++++||||.||+.|++.+|+..+ ++..+. +..|++++++  +++|.++|
T Consensus       154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~va-~na~~~lk~~Ad~vi~~~d~~~vl~~l  209 (210)
T d1j97a_         154 EGINLEDTVAVGDGANDISMFKKAGLKIA-FCAKPILKEKADICIEKRDLREILKYI  209 (210)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHHHCSEEEE-ESCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred             hcccccceEEecCCcChHHHHHHCCCCEE-ECCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence            99999999999999999999999998654 443332 6789999985  45665543

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.75  E-value=8.1e-20  Score=138.91  Aligned_cols=65  Identities=15%  Similarity=0.267  Sum_probs=56.2

Q ss_pred             chHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566          147 QELQLISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF  211 (238)
Q Consensus       147 ~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l  211 (238)
                      |.+.++.. ++++|++|++++||||++ +||.+|+++||.+|+|.+|..        ...||++++++.||.++|
T Consensus       186 P~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l  260 (261)
T d1vjra_         186 PNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV  260 (261)
T ss_dssp             TSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred             CcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence            46666665 899999999999999996 599999999999999988752        345899999999998876

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=128.89  Aligned_cols=117  Identities=17%  Similarity=0.229  Sum_probs=78.3

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccc--c----c----eeeecccCCCCCCCCCchHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDC--F----D----GIVNFESLNPTNKTTGQELQLIS-  153 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~--f----~----~i~~~~~~~~~k~~~~~~~~~~~-  153 (238)
                      ..++||+.++++.|+.+   .+|+|++....+..+++.+|++.+  +    .    ..++......+-.....+..+.+ 
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~  160 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  160 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHH
Confidence            56789999999998755   579999999999999999998743  1    0    11111101110011111222322 


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHH
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNI  207 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el  207 (238)
                      +.+  +++++++++||||.+|+.|++.+|+. +.++....    +..+++++.++.||
T Consensus       161 ~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~-va~~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         161 LKE--KFHFKKIIMIGDGATDMEACPPADAF-IGFGGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HHH--HHCCSCEEEEESSHHHHTTTTTSSEE-EEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             HHh--ccCccccEEEEeCHhhHHHHHhCCce-EEECCCHHHHHHHHhCCCEeCCHHHh
Confidence            333  35678999999999999999999986 45543322    45689999999886

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.74  E-value=5.2e-18  Score=135.18  Aligned_cols=129  Identities=17%  Similarity=0.169  Sum_probs=99.5

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce--eeecccC-------CCCCCCCCchHHHHHH-
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG--IVNFESL-------NPTNKTTGQELQLISM-  154 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~--i~~~~~~-------~~~k~~~~~~~~~~~~-  154 (238)
                      +.|.+++.++|+.|+.+   .+++||.+...+..+++++|+.++|+.  +++.++.       ....+..+|.+..+.. 
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            45778999999988755   579999999999999999999999975  3333321       1111222335554443 


Q ss_pred             H--------------HhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---------CccccccccChhHHHHHh
Q 035566          155 L--------------RMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---------TKGADYALENIHNIREAF  211 (238)
Q Consensus       155 ~--------------~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---------~~~ad~v~~~~~el~~~l  211 (238)
                      +              +.+++++++|+||||+.||+.+|+++|+++|+|.+|..         ..+||++++++.||..+|
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il  373 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL  373 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence            3              34577899999999999999999999999999987652         237999999999999998


Q ss_pred             HHhhh
Q 035566          212 PELWD  216 (238)
Q Consensus       212 ~~~~~  216 (238)
                      ..+++
T Consensus       374 ~~l~~  378 (380)
T d1qyia_         374 DNLLE  378 (380)
T ss_dssp             SCTTT
T ss_pred             HHHHh
Confidence            87765

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.74  E-value=4.5e-19  Score=134.13  Aligned_cols=61  Identities=18%  Similarity=0.255  Sum_probs=52.5

Q ss_pred             chHHHHHH-HHhcCCCCCeEEEEeCCcc-chhHHHhcCCeEEEecCCCC--------CccccccccChhHH
Q 035566          147 QELQLISM-LRMVAHHFFQRLFFDDSTR-NIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNI  207 (238)
Q Consensus       147 ~~~~~~~~-~~~~~~~~~~~v~vgD~~~-di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el  207 (238)
                      |.+.+++. ++++|++|++|+||||+++ ||.+|+++||++|+|.+|..        ...||++++|+.|+
T Consensus       181 P~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~  251 (253)
T d1wvia_         181 PEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW  251 (253)
T ss_dssp             TSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred             CCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence            48888875 8999999999999999976 99999999999999987642        33579999999885

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.72  E-value=7.3e-19  Score=132.95  Aligned_cols=71  Identities=11%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             eecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCcc-chhHHHhcCCeEEEecCCCC--------Ccccccccc
Q 035566          133 VNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDSTR-NIECGKSIGLHTVLVGTSRR--------TKGADYALE  202 (238)
Q Consensus       133 ~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~-di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~  202 (238)
                      .+.......||    .+.++.. ++++|++|++++||||+.+ ||.+|+++|+++++|.+|..        ..+||++++
T Consensus       171 ~~~~~~~~~KP----~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~  246 (253)
T d1yv9a1         171 TQTKPVYIGKP----KAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD  246 (253)
T ss_dssp             HTCCCEECSTT----SHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred             ccceeeeeccc----chhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEEC
Confidence            33344444554    7777665 8999999999999999965 99999999999999976641        445799999


Q ss_pred             ChhHH
Q 035566          203 NIHNI  207 (238)
Q Consensus       203 ~~~el  207 (238)
                      ++.|+
T Consensus       247 sl~e~  251 (253)
T d1yv9a1         247 SLDEW  251 (253)
T ss_dssp             SGGGC
T ss_pred             CHHHc
Confidence            99985

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.1e-18  Score=120.81  Aligned_cols=99  Identities=17%  Similarity=0.294  Sum_probs=67.5

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCC--------h-------HHHHHHHHhcCcccccceee-----ecccCCCCCCC
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNAD--------E-------IHVAKVLRKLGLEDCFDGIV-----NFESLNPTNKT  144 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~--------~-------~~~~~~l~~~~~~~~f~~i~-----~~~~~~~~k~~  144 (238)
                      +.++||+.++|+.|+.+   .+++||.+        .       ..+...+...|+.  ++.++     ........|| 
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~~~~~~~KP-  105 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKP-  105 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTT-
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeecccccccccccccc-
Confidence            56779999999888655   56899864        1       1233445555543  33333     3333444555 


Q ss_pred             CCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                         .++++. +++++|++|++++||||+..|+++|+++|+++++++++.
T Consensus       106 ---~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         106 ---KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             ---SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             ---ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence               555555 589999999999999999999999999999999997764

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.1e-16  Score=116.66  Aligned_cols=125  Identities=11%  Similarity=0.099  Sum_probs=83.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCcccccceeeecccC-CCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566           88 LKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL-NPTNKTTGQELQLISMLRMVAHHFFQ  164 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~  164 (238)
                      ....++....+..++  ...+++|.+...........++....+......... ....+...+.......++.+++++++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e  147 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence            445566666655443  336788888888888888888876554433322211 11111112344455668899999999


Q ss_pred             EEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc-cChhHHHHHhHH
Q 035566          165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL-ENIHNIREAFPE  213 (238)
Q Consensus       165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~-~~~~el~~~l~~  213 (238)
                      +++|||+.||++|++.+|+..+ ++++..  +..+++++ .+.+|+.+.|..
T Consensus       148 viaiGDg~NDi~Ml~~Ag~gIA-mna~~~v~~~~~~~~~~~~~~d~~~~~~~  198 (206)
T d1rkua_         148 VIAAGDSYNDTTMLSEAHAGIL-FHAPENVIREFPQFPAVHTYEDLKREFLK  198 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEEE-ESCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred             eEEecCCccCHHHHHhCCccEE-ECCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence            9999999999999999998655 465543  55678764 678888876644

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.64  E-value=4.9e-16  Score=115.12  Aligned_cols=106  Identities=12%  Similarity=0.123  Sum_probs=71.1

Q ss_pred             ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          112 DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       112 ~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      ....+..+++.++..  +.............+..++...+..+++++|++++++++|||+.||+.|++.+|+ ++.+.++
T Consensus       120 ~~~~~~~~~~~~~~~--~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~-~vav~na  196 (230)
T d1wr8a_         120 NVETVREIINELNLN--LVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY-KVAVAQA  196 (230)
T ss_dssp             CHHHHHHHHHHTTCS--CEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred             cHHHHHHHHHHhccc--eEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCe-EEEECCC
Confidence            334556666665543  1111111111222222334566666799999999999999999999999999997 4666555


Q ss_pred             CC--CccccccccChhH--HHHHhHHhhhcccc
Q 035566          192 RR--TKGADYALENIHN--IREAFPELWDADEI  220 (238)
Q Consensus       192 ~~--~~~ad~v~~~~~e--l~~~l~~~~~~~~~  220 (238)
                      .+  +..|++|+++..+  +.+.+.+++...|+
T Consensus       197 ~~~~k~~A~~v~~~~~~~gv~~~i~~~l~~~g~  229 (230)
T d1wr8a_         197 PKILKENADYVTKKEYGEGGAEAIYHILEKFGY  229 (230)
T ss_dssp             CHHHHTTCSEECSSCHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHhCCEEECCCCcCHHHHHHHHHHHHcCC
Confidence            44  6779999987553  77888888776664

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.53  E-value=5.3e-15  Score=109.42  Aligned_cols=67  Identities=10%  Similarity=0.108  Sum_probs=52.4

Q ss_pred             CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChh--HHHHHhHH
Q 035566          146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIH--NIREAFPE  213 (238)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~--el~~~l~~  213 (238)
                      .+...+..+++++|++++++++|||+.||+.|++.+|. +|.|+++.+  +..||+++++..  .+.+++.+
T Consensus       151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~  221 (225)
T d1l6ra_         151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANATDNIKAVSDFVSDYSYGEEIGQIFKH  221 (225)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred             chHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence            45666777899999999999999999999999999996 566765554  667899887654  45555443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.53  E-value=3e-14  Score=108.82  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=58.2

Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      .+++..|..++..+++.+|++++++++|||+.||+.|++.+|. ++.|.++.+  +..|++++++.++  +.+.|.++
T Consensus       208 ~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~-svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l  284 (285)
T d1nrwa_         208 SSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL  284 (285)
T ss_dssp             EETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred             ecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCe-EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence            3344456888888899999999999999999999999999996 567766554  6789999998665  66666554

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.50  E-value=7.2e-15  Score=111.50  Aligned_cols=75  Identities=11%  Similarity=0.099  Sum_probs=61.0

Q ss_pred             CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhhh
Q 035566          141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELWD  216 (238)
Q Consensus       141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~  216 (238)
                      ..++..|...+..+++++|++++++++|||+.||+.|.+.+|. ++.+.++.+  +..|++++.+.++  +..++.+++.
T Consensus       185 ~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~-sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~  263 (267)
T d1nf2a_         185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL-RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST  263 (267)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred             cCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCc-EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence            3344456788888899999999999999999999999999997 567766554  7789999998877  7777776653

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.49  E-value=7.4e-15  Score=101.59  Aligned_cols=100  Identities=16%  Similarity=0.110  Sum_probs=61.4

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHhcC------cccccceeeecccCCCCCCCCCchHHHHH-H
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRKLG------LEDCFDGIVNFESLNPTNKTTGQELQLIS-M  154 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~~~------~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~  154 (238)
                      ..++|++.++|+.++.+   .+++||.+...   +...++..+      ....++...........     +...... .
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~k~~~  109 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTR-----KDDVVKEEI  109 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCS-----CHHHHHHHH
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccC-----CchHHHHHH
Confidence            36789999999888654   57899975321   112222211      11223333333332222     2333333 4


Q ss_pred             HHhcCCCCCe-EEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          155 LRMVAHHFFQ-RLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       155 ~~~~~~~~~~-~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      +..+..++.+ +++|||+..|++||+++|++++.|++|.
T Consensus       110 l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd  148 (149)
T d1ltqa1         110 FWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD  148 (149)
T ss_dssp             HHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred             HHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence            5666555555 5678999999999999999999998873

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=1e-14  Score=110.81  Aligned_cols=71  Identities=13%  Similarity=0.113  Sum_probs=56.6

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHh
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPEL  214 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~  214 (238)
                      +...+..++..++++++++++++++|||+.||+.|.+.+|. ++.+.++.+  +..|++++.+..+  +.+.+.++
T Consensus       194 ~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~-~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~  268 (271)
T d1rkqa_         194 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKY  268 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred             CCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCc-EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence            33345777887899999999999999999999999999996 566665554  6678999988776  66666654

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=2.5e-13  Score=102.81  Aligned_cols=75  Identities=13%  Similarity=0.089  Sum_probs=61.4

Q ss_pred             CCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhhhc
Q 035566          142 NKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELWDA  217 (238)
Q Consensus       142 k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~~~  217 (238)
                      .++..+..++..+++++|++++++++|||+.||+.|.+.+|. ++.+.++.+  +..|++++.+.++  +.+.|.+++..
T Consensus       186 p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~-~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~  264 (269)
T d1rlma_         186 IPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARY-SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN  264 (269)
T ss_dssp             CTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred             cCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCe-EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhc
Confidence            344456778888899999999999999999999999999997 556655554  7789999998777  88888887763

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.40  E-value=6.3e-13  Score=100.16  Aligned_cols=70  Identities=19%  Similarity=0.314  Sum_probs=56.0

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPE  213 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~  213 (238)
                      ++..+...+..+++++|++++++++|||+.||+.|.+.+|. ++.|.++.+  +..|++++.+..+  +.+.|.+
T Consensus       183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~  256 (260)
T d2rbka1         183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH  256 (260)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence            33455777777899999999999999999999999999997 577766654  6778999998765  5555544

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.39  E-value=9.5e-13  Score=100.12  Aligned_cols=74  Identities=14%  Similarity=0.108  Sum_probs=58.6

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH---HHHHhHHhhhc
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN---IREAFPELWDA  217 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e---l~~~l~~~~~~  217 (238)
                      +...+...+..+++.++++++++++|||+.||+.|.+.+|. ++.+.++.+  +..|++++.+-.+   +..++.++++.
T Consensus       204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~-~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~  282 (283)
T d2b30a1         204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY-SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL  282 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE-EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred             CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCc-EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence            33455777777899999999999999999999999999996 566666554  6678999975432   77888888764

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.34  E-value=8.7e-13  Score=93.07  Aligned_cols=115  Identities=15%  Similarity=0.173  Sum_probs=82.3

Q ss_pred             HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566           95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN  174 (238)
Q Consensus        95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d  174 (238)
                      ...|+......+++|......+....+.+++...+    ...     .   .+...+..++++++++++++++|||..||
T Consensus        41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~----~~~-----~---~K~~~l~~~~~~~~i~~~~v~~vGDd~nD  108 (177)
T d1k1ea_          41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF----LGK-----L---EKETACFDLMKQAGVTAEQTAYIGDDSVD  108 (177)
T ss_dssp             HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE----ESC-----S---CHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred             HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccc----ccc-----c---cHHHHHHHHHHHhcCCcceeEEecCCccH
Confidence            34556666778899998888888888887764322    111     1   13555666799999999999999999999


Q ss_pred             hhHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhccccc
Q 035566          175 IECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDADEIS  221 (238)
Q Consensus       175 i~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~~~~  221 (238)
                      +++.+.+|+..+..+.... +..|++|+.+-..   ++++++.++.+.+..
T Consensus       109 l~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~  159 (177)
T d1k1ea_         109 LPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKS  159 (177)
T ss_dssp             HHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCT
T ss_pred             HHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHCCCh
Confidence            9999999985444443333 7789999988442   555566666665554

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.22  E-value=2.7e-10  Score=84.26  Aligned_cols=66  Identities=11%  Similarity=0.118  Sum_probs=47.0

Q ss_pred             CCCCchHHHHHHHHhcC-CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHh
Q 035566          143 KTTGQELQLISMLRMVA-HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAF  211 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l  211 (238)
                      +...+..++..++++++ ++++++++|||+.||++|.+.+|. ++.|+++..  .....+.++.|+.+++
T Consensus       176 ~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~-~va~~Na~~--~~~~~~~~i~~~~~~i  242 (243)
T d1wzca1         176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDK-VFIVGSLKH--KKAQNVSSIIDVLEVI  242 (243)
T ss_dssp             CSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSE-EEEESSCCC--TTCEEESCHHHHHHHH
T ss_pred             hhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCc-EEEeCCCCh--HHHhhhhHHHHHHHhh
Confidence            44456777877888884 889999999999999999999996 566655542  2222355555555543

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=4.1e-11  Score=88.04  Aligned_cols=45  Identities=11%  Similarity=0.095  Sum_probs=35.6

Q ss_pred             CchHHHHHHH---HhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          146 GQELQLISML---RMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       146 ~~~~~~~~~~---~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      .+..++..++   +.+|++++++++|||+.||++|.+.+|. +|+|.+.
T Consensus       184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n~  231 (232)
T d1xvia_         184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKGL  231 (232)
T ss_dssp             CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCCC
T ss_pred             hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeCC
Confidence            3455555544   4679999999999999999999999996 6777543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.08  E-value=1.2e-10  Score=85.24  Aligned_cols=69  Identities=6%  Similarity=0.002  Sum_probs=50.7

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHH
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPE  213 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~  213 (238)
                      ...+++..+..++..+++     .+++++|||+.||+.|.+.+|. ++.|..+..+..|++++++.+|+.+++..
T Consensus       152 di~p~g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~-~~av~~g~~~~~A~~~~~~~~ev~~~l~~  220 (229)
T d1u02a_         152 ELRVPGVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDD-ALTIKVGEGETHAKFHVADYIEMRKILKF  220 (229)
T ss_dssp             EEECTTCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTT-SEEEEESSSCCCCSEEESSHHHHHHHHHH
T ss_pred             EEecCCCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCC-eEEEEeCCCCccCeEEcCCHHHHHHHHHH
Confidence            334344455666655554     3679999999999999999975 45555555567899999999998876654

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.93  E-value=1.3e-10  Score=86.38  Aligned_cols=47  Identities=17%  Similarity=0.094  Sum_probs=39.4

Q ss_pred             CCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566          145 TGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~  192 (238)
                      ..+...+..+++++|++++++++|||+.||+.|.+.+|. ++.+.++.
T Consensus       161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~na~  207 (244)
T d1s2oa1         161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQ  207 (244)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCC
T ss_pred             cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCCCC
Confidence            345667777899999999999999999999999999995 66675544

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.7e-10  Score=85.14  Aligned_cols=45  Identities=13%  Similarity=0.028  Sum_probs=32.4

Q ss_pred             CCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecC
Q 035566          143 KTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGT  190 (238)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~  190 (238)
                      ++..+..++..+   ++++++++++|||    +.||++|.+.+|..+++|++
T Consensus       182 ~~vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         182 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             cccCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            444455555433   4678999999999    66999999999976776655

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=6.6e-09  Score=74.31  Aligned_cols=103  Identities=15%  Similarity=0.157  Sum_probs=63.5

Q ss_pred             CCCCCCChhHHHHHhcCCCC----eEEEecCChH---HHH---HHHHh-cCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566           85 YENLKPDPVLRNLLLSLPIR----KVIFSNADEI---HVA---KVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLIS  153 (238)
Q Consensus        85 ~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~---~~~---~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~  153 (238)
                      ...++|+||+.++++.|+..    .+++|.....   ...   .-+++ ++-. ..+.++.+.+    |.          
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~-~~~~~~~t~~----K~----------  134 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPD-FLEQIVLTRD----KT----------  134 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGG-GGGGEEECSC----ST----------
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCC-CccEEEEccc----cc----------
Confidence            35689999999999988532    3567765422   111   22333 2222 1222332221    10          


Q ss_pred             HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCc----cccccccChhHHHH
Q 035566          154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTK----GADYALENIHNIRE  209 (238)
Q Consensus       154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~----~ad~v~~~~~el~~  209 (238)
                         .+..    -++|+|++.++..+..+|+.+++++++++..    ..-+.+.++.|+.+
T Consensus       135 ---~~~~----d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~  187 (195)
T d1q92a_         135 ---VVSA----DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWK  187 (195)
T ss_dssp             ---TSCC----SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHH
T ss_pred             ---eecC----eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHH
Confidence               1222    2899999999999999999999998877532    22356889988644

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=8.6e-09  Score=77.78  Aligned_cols=96  Identities=14%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeee----cccC----CCCCCCC---CchHHHH
Q 035566           87 NLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVN----FESL----NPTNKTT---GQELQLI  152 (238)
Q Consensus        87 ~~~~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~----~~~~----~~~k~~~---~~~~~~~  152 (238)
                      .+...||+.++++.|+   .+.+|+|++....++.+++++|+...--.+++    .++.    +...|..   .+.....
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            4677899999998886   45789999999999999999987631101221    1111    1111111   1223333


Q ss_pred             HHHH--hcCCCCCeEEEEeCCccchhHHHhcC
Q 035566          153 SMLR--MVAHHFFQRLFFDDSTRNIECGKSIG  182 (238)
Q Consensus       153 ~~~~--~~~~~~~~~v~vgD~~~di~~a~~~G  182 (238)
                      ....  ...-+..+++++|||.+|+.||..+.
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            3222  22235678999999999999998764

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7e-10  Score=81.68  Aligned_cols=51  Identities=16%  Similarity=0.041  Sum_probs=39.0

Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCc----cchhHHHhcCCeEEEecCCC
Q 035566          139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDST----RNIECGKSIGLHTVLVGTSR  192 (238)
Q Consensus       139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~----~di~~a~~~G~~~i~v~~~~  192 (238)
                      ....++..+..++..+++   .+++++++|||+.    ||++|.+.+|..++.|.++.
T Consensus       178 ei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~  232 (244)
T d2fuea1         178 DVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ  232 (244)
T ss_dssp             EEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH
T ss_pred             eecchhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHH
Confidence            344455566777766654   4889999999975    99999999998788887654

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=2.5e-08  Score=70.81  Aligned_cols=92  Identities=18%  Similarity=0.253  Sum_probs=59.2

Q ss_pred             CCCChhHHHHHhcCCCC---eEEEecCChH---HHHHHH-HhcCccc--ccceeeecccCCCCCCCCCchHHHHHHHHhc
Q 035566           88 LKPDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVL-RKLGLED--CFDGIVNFESLNPTNKTTGQELQLISMLRMV  158 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l-~~~~~~~--~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~  158 (238)
                      ..|.||+.++++.++.+   .+++||....   .+...+ +.+|+..  .-+.++....  ..|.   ..   ...++++
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~---~r---r~~Ik~y  156 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQN---TK---SQWLQDK  156 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCC---CS---HHHHHHT
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCch---HH---HHHHHHc
Confidence            35678999999888654   6799997532   333444 4577642  2233333322  1111   11   2223567


Q ss_pred             CCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566          159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS  191 (238)
Q Consensus       159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~  191 (238)
                      ++    +++|||..+|+.+|+.+|++.|-+-+.
T Consensus       157 ~I----~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         157 NI----RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             TE----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             Ce----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence            76    789999999999999999999988443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=1.2e-08  Score=72.17  Aligned_cols=90  Identities=21%  Similarity=0.236  Sum_probs=57.7

Q ss_pred             ChhHHHHHhcCC---CCeEEEecCC--------hH----HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-H
Q 035566           91 DPVLRNLLLSLP---IRKVIFSNAD--------EI----HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-M  154 (238)
Q Consensus        91 ~~~~~~~l~~l~---~~~~i~t~~~--------~~----~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~  154 (238)
                      +|++.+.|+.|.   ...+|+||.+        ..    ....+++.++..  +..+++.......||    .++++. +
T Consensus        52 ~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP----~~GM~~~~  125 (195)
T d1yj5a1          52 YPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKP----VSGMWDHL  125 (195)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTT----STHHHHHH
T ss_pred             cCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCC----ccHHHHHH
Confidence            466767666664   3467888852        11    223445555543  333444444455665    666665 4


Q ss_pred             HHhcC----CCCCeEEEEeCC-----------------ccchhHHHhcCCeEE
Q 035566          155 LRMVA----HHFFQRLFFDDS-----------------TRNIECGKSIGLHTV  186 (238)
Q Consensus       155 ~~~~~----~~~~~~v~vgD~-----------------~~di~~a~~~G~~~i  186 (238)
                      +++++    ++.++++||||.                 ..|+..|.++|++..
T Consensus       126 ~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         126 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             HHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            66664    888999999994                 489999999999864

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.70  E-value=1.4e-07  Score=74.69  Aligned_cols=103  Identities=12%  Similarity=0.029  Sum_probs=70.1

Q ss_pred             CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhc---------Ccccccceeeeccc-----------------CC
Q 035566           89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKL---------GLEDCFDGIVNFES-----------------LN  139 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~---------~~~~~f~~i~~~~~-----------------~~  139 (238)
                      ..-|.+...|+.++.   +.+++||++..++...+..+         .+.++||.|+....                 .+
T Consensus       185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g  264 (458)
T d2bdea1         185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENG  264 (458)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTC
T ss_pred             cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCC
Confidence            345778888877754   47899999999998888753         56689999876542                 00


Q ss_pred             C-------CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCc-cc-hhHHHhcCCeEEEecCC
Q 035566          140 P-------TNKTTGQELQLISMLRMVAHHFFQRLFFDDST-RN-IECGKSIGLHTVLVGTS  191 (238)
Q Consensus       140 ~-------~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~-~d-i~~a~~~G~~~i~v~~~  191 (238)
                      .       .+++.=......++.+.+|....++++|||++ .| +..-+..||.+++|-..
T Consensus       265 ~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         265 TMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             CEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             ccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            0       00000001224445678898888999999996 55 45556789999999664

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.29  E-value=1.1e-06  Score=58.33  Aligned_cols=106  Identities=13%  Similarity=0.134  Sum_probs=66.0

Q ss_pred             CChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566           90 PDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL  166 (238)
Q Consensus        90 ~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v  166 (238)
                      +.|++.+.++.|+   .+..++|+........+.+.+|++.+|    ...     .     +..-..+.+.+.-. ..+.
T Consensus        22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~----~~~-----~-----p~~k~~~v~~~q~~-~~v~   86 (135)
T d2b8ea1          22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI----AEV-----L-----PHQKSEEVKKLQAK-EVVA   86 (135)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE----CSC-----C-----HHHHHHHHHHHTTT-SCEE
T ss_pred             CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc----ccc-----c-----hhHHHHHHHHHHcC-CEEE
Confidence            4566666666554   456799999999999999999975432    211     0     12222233444332 5788


Q ss_pred             EEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566          167 FFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF  211 (238)
Q Consensus       167 ~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l  211 (238)
                      |+||+.||..+.+.+++. +.++++..  +..+|.++.  ++..+.+.+
T Consensus        87 ~vGDg~nD~~aL~~Advg-ia~~~~~~~~~~aADivl~~~~l~~i~~aI  134 (135)
T d2b8ea1          87 FVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAI  134 (135)
T ss_dssp             EEECSSSSHHHHHHSSEE-EEECCC--------SEEESSCCTHHHHHHH
T ss_pred             EEeCCCCcHHHHHhCCee-eecCccCHHHHHhCCEEEECCCHHHHHHHh
Confidence            999999999999999985 44544433  677888874  466665543

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=4.6e-05  Score=54.38  Aligned_cols=153  Identities=13%  Similarity=0.102  Sum_probs=87.4

Q ss_pred             CCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCC------
Q 035566           68 YDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN------  139 (238)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------  139 (238)
                      ++...+...++..     ..+...||+.+.|+.++..  .+|+|.+...++..+..++|+.  ++...+.-+..      
T Consensus        65 ~Gvt~edL~~fSE-----~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e~~~T~~~lD~~~~p~  137 (308)
T d1y8aa1          65 AGVKNRDVERIAE-----LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GELHGTEVDFDSIAVPE  137 (308)
T ss_dssp             TTCCHHHHHHHHH-----HHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SEEEEEBCCGGGCCCCH
T ss_pred             hCCCHHHHHHHhh-----hceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ceeecccccccccCCCh
Confidence            4455555555443     2356779999999998755  6899999999999999998875  22111111111      


Q ss_pred             ---------------------------------------CCCCCC--CchHHHHHHHHhcCCCCCeEEEEeCCccchhHH
Q 035566          140 ---------------------------------------PTNKTT--GQELQLISMLRMVAHHFFQRLFFDDSTRNIECG  178 (238)
Q Consensus       140 ---------------------------------------~~k~~~--~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a  178 (238)
                                                             ..|+.+  ++...+...++..++++  .++||||..|+++.
T Consensus       138 ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~--~~~VGDSITDve~L  215 (308)
T d1y8aa1         138 GLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDF--PVVVGDSISDYKMF  215 (308)
T ss_dssp             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSS--CEEEECSGGGHHHH
T ss_pred             HHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCc--ceeccCccccHHHH
Confidence                                                   111111  11222222356667765  49999999998777


Q ss_pred             Hhc----CCeEEEecCCCCCccccccccChhH--HHHHhHHhhhccccccccccccccc
Q 035566          179 KSI----GLHTVLVGTSRRTKGADYALENIHN--IREAFPELWDADEISKNIKCSENVA  231 (238)
Q Consensus       179 ~~~----G~~~i~v~~~~~~~~ad~v~~~~~e--l~~~l~~~~~~~~~~~~~~~~~~~~  231 (238)
                      +.+    |+.....++.+..+.|+..+-|.+-  +..++ ++|...... +.+.++.+.
T Consensus       216 r~~r~~gGlaIsFNGN~Yal~eA~VaiiS~~~~a~~~i~-dlf~~~~~~-Afei~~~~~  272 (308)
T d1y8aa1         216 EAARGLGGVAIAFNGNEYALKHADVVIISPTAMSEAKVI-ELFMERKER-AFEVLSAVS  272 (308)
T ss_dssp             HHHHHTTCEEEEESCCHHHHTTCSEEEECSSTHHHHHHH-HHHHHHGGG-GGGGGGGCC
T ss_pred             HHHhcCCCeeEEecCccccccccceEEeccchhHHHHHH-HHHhcCcHH-HHHHHHHhc
Confidence            664    5443344444456667666555444  44433 555444222 233344443

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.73  E-value=9.4e-05  Score=50.65  Aligned_cols=117  Identities=10%  Similarity=0.175  Sum_probs=72.6

Q ss_pred             CCChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCccccccee----eecccC------------------CCCCC
Q 035566           89 KPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGI----VNFESL------------------NPTNK  143 (238)
Q Consensus        89 ~~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i----~~~~~~------------------~~~k~  143 (238)
                      +|.+++.+.++.|+   .+..++|+........+.+.+|+...-..+    +.....                  ....|
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p   99 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP   99 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence            56678877776665   446799999999999999999975321111    111000                  01111


Q ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccC--hhHHHHHh
Q 035566          144 TTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALEN--IHNIREAF  211 (238)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~--~~el~~~l  211 (238)
                        ..+..+.+.+++.|   ..+.|+||+.||..+.+.+.+ .+.++.+..  +..+|+++.+  +..+.+++
T Consensus       100 --~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~Adv-GIa~~~gt~~a~~aAdivl~~~~l~~v~~~I  165 (168)
T d1wpga2         100 --SHKSKIVEYLQSYD---EITAMTGDGVNDAPALKKAEI-GIAMGSGTAVAKTASEMVLADDNFSTIVAAV  165 (168)
T ss_dssp             --HHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSE-EEEETTSCHHHHHTCSEEETTCCTHHHHHHH
T ss_pred             --hHHHHHHHHHHhcc---cceeEEecCCCCHHHHHhCCE-EEEeccccHHHHHhCCEEEccCCHHHHHHHH
Confidence              01122222334443   579999999999999999997 455555443  5568887665  66666655

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=95.34  E-value=0.003  Score=40.39  Aligned_cols=15  Identities=33%  Similarity=0.454  Sum_probs=12.6

Q ss_pred             eeEEEEecCCceeeC
Q 035566            4 YECLLFDVDDTLYSH   18 (238)
Q Consensus         4 ~k~vifD~DGTL~~~   18 (238)
                      ||.|+||+||||+..
T Consensus         1 mK~i~~DiDGTI~~~   15 (124)
T d1xpja_           1 MKKLIVDLDGTLTQA   15 (124)
T ss_dssp             CCEEEECSTTTTBCC
T ss_pred             CCEEEEeCCCCeECC
Confidence            366999999999884

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0012  Score=45.63  Aligned_cols=90  Identities=14%  Similarity=0.094  Sum_probs=63.7

Q ss_pred             CCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566           88 LKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR  165 (238)
Q Consensus        88 ~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  165 (238)
                      +...||+.++|+.+..  ..+|.|.+...++..+++.+.-...|......+.......      ...+-++.+|.+.+++
T Consensus        54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~------~~~KdL~~l~~~l~~v  127 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRG------NYVKDLSRLGRDLRRV  127 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETT------EEECCGGGSCSCGGGE
T ss_pred             EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCC------cccccHhhcCCCHHHe
Confidence            3567999999999864  4789999999999999999877666666555443322221      0112246788888999


Q ss_pred             EEEeCCccchhHHHhcCC
Q 035566          166 LFFDDSTRNIECGKSIGL  183 (238)
Q Consensus       166 v~vgD~~~di~~a~~~G~  183 (238)
                      ++|+|++.-...-...|+
T Consensus       128 vivDd~~~~~~~~~~N~I  145 (181)
T d1ta0a_         128 LILDNSPASYVFHPDNAV  145 (181)
T ss_dssp             EEECSCGGGGTTCGGGBC
T ss_pred             EEEcCChhhhhcCccCee
Confidence            999999887654334444

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=91.08  E-value=0.034  Score=35.23  Aligned_cols=33  Identities=12%  Similarity=0.135  Sum_probs=20.7

Q ss_pred             CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHH
Q 035566           89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLR  121 (238)
Q Consensus        89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~  121 (238)
                      +|.+++.+.|+.|+..   .++.|..+........+
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~   56 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIE   56 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHH
Confidence            3667888888888544   45677766554444333

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.72  E-value=0.25  Score=33.32  Aligned_cols=15  Identities=33%  Similarity=0.671  Sum_probs=13.1

Q ss_pred             eeEEEEecCCceeeC
Q 035566            4 YECLLFDVDDTLYSH   18 (238)
Q Consensus         4 ~k~vifD~DGTL~~~   18 (238)
                      ...+++|+|+||+.+
T Consensus        15 k~~LVLDLDeTLihs   29 (181)
T d1ta0a_          15 KICVVIDLDETLVHS   29 (181)
T ss_dssp             SCEEEECCBTTTEEE
T ss_pred             CeEEEEeCCCCEEcc
Confidence            468999999999984