Citrus Sinensis ID: 035578

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
MMGRWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSLNSS
ccHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccEccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHcccccHcHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccEEccccEEcccc
MMGRWVYVVLVISLILSlrnpkrfdtqtitddelthpshelrleydyyrdkcpdaeKTVRSKMAQLYsqdkqvpanllrlffhdcfimgcdasvflddsngneshpierqaipsqtlkgfdKINLIKEELEEACPGMVSCADALALATRDGillaggpyypvftgrrdSIRSYFQEataeipgpdddlNKILHLfslrgfspretVSLIgahnigkiSCQFIRNRLYdflgtgqpdptmsdDFLVEMRVLCgdgnqtslhgspapasapapmrssgmrestlgmNYYQRLStsissgagfdaHYYQNLLrgrgllhaDQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSnlgvlsgsqgqvrtncslslnss
MMGRWVYVVLVISLIlslrnpkrfdtqtitddelthpshelrleydyYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNEShpierqaipsqtlkgFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATaeipgpdddLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTslhgspapasapapmRSSGMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNlgvlsgsqgqvrtncslslnss
MMGRWvyvvlvislilslRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGspapasapapmrssGMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSLNSS
***RWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPD*********AQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLD******************TLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG*******************************MNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVL******************
***RWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG***********PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG*********SPAPASAPAPMRSSGMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLS****
MMGRWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQT******************GMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSLNSS
MMGRWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGD*********************************YQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSL***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMGRWVYVVLVISLILSLRNPKRFDTQTITDDELTHPSHELRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSLNSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query377 2.2.26 [Sep-21-2011]
O81755404 Putative Peroxidase 48 OS yes no 0.867 0.809 0.457 5e-79
Q42578335 Peroxidase 53 OS=Arabidop no no 0.785 0.883 0.364 1e-57
P22195316 Cationic peroxidase 1 OS= N/A no 0.766 0.914 0.366 9e-57
O80912349 Peroxidase 23 OS=Arabidop no no 0.782 0.845 0.368 4e-56
P24102349 Peroxidase 22 OS=Arabidop no no 0.782 0.845 0.368 7e-56
P80679305 Peroxidase A2 OS=Armoraci N/A no 0.785 0.970 0.358 1e-55
O23237331 Peroxidase 49 OS=Arabidop no no 0.806 0.918 0.371 7e-55
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.790 0.832 0.350 9e-55
Q9FX85350 Peroxidase 10 OS=Arabidop no no 0.793 0.854 0.365 1e-54
P17180349 Peroxidase C3 OS=Armoraci N/A no 0.787 0.851 0.363 1e-54
>sp|O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3 Back     alignment and function desciption
 Score =  295 bits (754), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 212/339 (62%), Gaps = 12/339 (3%)

Query: 43  LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
           L YDYYR+ CP AEK +   +  +Y+    V   ++RL FHDCFI GCDASV LD    +
Sbjct: 68  LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLD---AD 124

Query: 103 ESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPV 162
           E+H  E+ A P+ +LKGFD I+ +K ELE  CPG+VSCAD L LA R+ +L+AGGP+YP+
Sbjct: 125 EAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPL 184

Query: 163 FTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFI 222
            TGR+DS  +Y   A  E+P PD  L+ IL  FS RGF+ RETVSL GAH+IG   C F 
Sbjct: 185 ETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFF 244

Query: 223 RNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRESTL 282
           +NRLY+F  TG+PDP ++  FL E++  C     TS   +P     P  + +S   E++ 
Sbjct: 245 KNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASD-SENSY 303

Query: 283 GMNYYQR----LSTSISSGAG---FDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYA 335
           GM+   R    +  S ++  G   F   Y++ L++ +GL+ +DQQLM  E T   V AYA
Sbjct: 304 GMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYA 363

Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSL 374
           SD    +R +FA  M+K+S+  VL+G  GQVRT+CS +L
Sbjct: 364 SD-PLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKAL 401
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|O80912|PER23_ARATH Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1 Back     alignment and function description
>sp|P24102|PER22_ARATH Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2 Back     alignment and function description
>sp|P80679|PERA2_ARMRU Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|Q9FX85|PER10_ARATH Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1 Back     alignment and function description
>sp|P17180|PER3_ARMRU Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
255544630387 Peroxidase 57 precursor, putative [Ricin 0.976 0.950 0.597 1e-128
297738229375 unnamed protein product [Vitis vinifera] 0.973 0.978 0.597 1e-123
359473497381 PREDICTED: putative Peroxidase 48 [Vitis 0.933 0.923 0.602 1e-118
356528683399 PREDICTED: putative Peroxidase 48-like [ 0.984 0.929 0.562 1e-117
356555208384 PREDICTED: putative Peroxidase 48-like [ 0.952 0.934 0.558 1e-114
449444262420 PREDICTED: LOW QUALITY PROTEIN: putative 0.976 0.876 0.528 1e-112
224096636310 predicted protein [Populus trichocarpa] 0.811 0.987 0.604 1e-111
255550010437 Peroxidase 57 precursor, putative [Ricin 0.896 0.773 0.432 3e-80
359482598404 PREDICTED: putative Peroxidase 48-like [ 0.843 0.787 0.479 4e-80
259016324404 RecName: Full=Putative Peroxidase 48; Sh 0.867 0.809 0.457 3e-77
>gi|255544630|ref|XP_002513376.1| Peroxidase 57 precursor, putative [Ricinus communis] gi|223547284|gb|EEF48779.1| Peroxidase 57 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/383 (59%), Positives = 291/383 (75%), Gaps = 15/383 (3%)

Query: 4   RWVYVVLVISLILSLRNPKRFDTQTIT------DDEL--THPSHELR-LEYDYYRDKCPD 54
           R+  V+L+I ++LSLRNPK    + I        DE+  T+ + ++  LEYD+YR  CP 
Sbjct: 10  RFFAVMLIIPVLLSLRNPKVDQMEDINFSVFLQRDEIIRTYSTADIHDLEYDFYRQTCPQ 69

Query: 55  AEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPS 114
           AE  VRS+MA +YSQ   V A LLRLFFHDCFI GCDASVFLDDSNGN +  IE+QAIP+
Sbjct: 70  AESIVRSRMASIYSQHNDVSAGLLRLFFHDCFIKGCDASVFLDDSNGNSNRSIEKQAIPN 129

Query: 115 QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYF 174
           +TLKG DKI++IK++LE ACPG+VSCAD LALATRDG++LAGGP+YPVFTGRRDS +SYF
Sbjct: 130 RTLKGLDKIDMIKKDLENACPGVVSCADTLALATRDGVVLAGGPFYPVFTGRRDSTQSYF 189

Query: 175 QEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQ 234
           QEA AEIP P+ ++++ L LF+LRGF+ RETVSL+GAHN+G+I C FI+ RL +F GTGQ
Sbjct: 190 QEAMAEIPKPNGNISETLDLFALRGFNERETVSLLGAHNVGRIGCDFIQGRLDNFEGTGQ 249

Query: 235 PDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRESTLGMNYYQRLSTSI 294
           PDP+M  DF+ EMR+ C D N + +H       AP PM S  ++  T G+ + Q LSTS+
Sbjct: 250 PDPSMPSDFVNEMRLNCQD-NSSIVHD-----EAPVPMMSREVKNPTNGLMFSQGLSTSV 303

Query: 295 SSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMS 354
           SSG GFDAHYY+NLLRGRGLL +DQQLMA+E TA+ V  Y+SD G  +R DF+R M++MS
Sbjct: 304 SSGTGFDAHYYRNLLRGRGLLFSDQQLMADENTARYVRLYSSDDGITFRKDFSRAMVRMS 363

Query: 355 NLGVLSGSQGQVRTNCSLSLNSS 377
           NL VL+G QG+VRT CSL ++SS
Sbjct: 364 NLNVLTGIQGEVRTKCSLPVSSS 386

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297738229|emb|CBI27430.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473497|ref|XP_002269658.2| PREDICTED: putative Peroxidase 48 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356528683|ref|XP_003532929.1| PREDICTED: putative Peroxidase 48-like [Glycine max] Back     alignment and taxonomy information
>gi|356555208|ref|XP_003545927.1| PREDICTED: putative Peroxidase 48-like [Glycine max] Back     alignment and taxonomy information
>gi|449444262|ref|XP_004139894.1| PREDICTED: LOW QUALITY PROTEIN: putative Peroxidase 48-like [Cucumis sativus] gi|449524012|ref|XP_004169017.1| PREDICTED: LOW QUALITY PROTEIN: putative Peroxidase 48-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224096636|ref|XP_002310681.1| predicted protein [Populus trichocarpa] gi|222853584|gb|EEE91131.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255550010|ref|XP_002516056.1| Peroxidase 57 precursor, putative [Ricinus communis] gi|223544961|gb|EEF46476.1| Peroxidase 57 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359482598|ref|XP_002279534.2| PREDICTED: putative Peroxidase 48-like [Vitis vinifera] gi|297743272|emb|CBI36139.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|259016324|sp|O81755.3|PER48_ARATH RecName: Full=Putative Peroxidase 48; Short=Atperox P48; Flags: Precursor Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
TAIR|locus:2057180349 AT2G38380 [Arabidopsis thalian 0.570 0.616 0.411 9.9e-56
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.535 0.610 0.417 1.3e-55
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.570 0.616 0.411 2e-55
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.567 0.638 0.417 2.6e-55
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.599 0.668 0.393 6.1e-54
TAIR|locus:2012156350 AT1G49570 [Arabidopsis thalian 0.546 0.588 0.405 9.9e-54
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.567 0.658 0.415 2.6e-53
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.567 0.658 0.415 2.6e-53
TAIR|locus:2138278346 AT4G08780 [Arabidopsis thalian 0.578 0.630 0.404 2.6e-53
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.570 0.600 0.4 3.3e-53
TAIR|locus:2057180 AT2G38380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 443 (161.0 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
 Identities = 91/221 (41%), Positives = 136/221 (61%)

Query:    42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
             +L  D+Y   CP     + + +      D ++ A+LLRL FHDCF+ GCDAS+ LD+S  
Sbjct:    30 QLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNST- 88

Query:   102 NESHPIERQAIPS-QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
               S   E+ A P+  + +GF+ I+ +K  LE ACPG VSCAD L +A++  +LL+GGP++
Sbjct:    89 --SFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWW 146

Query:   161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
             PV  GRRDS+ ++F  A   +P P  +L ++   F+  G +   + V+L G H  G+  C
Sbjct:   147 PVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQC 206

Query:   220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSL 259
             QF+  RLY+F GT  PDP+++  +LVE+R LC  +GN T L
Sbjct:   207 QFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVL 247
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0010043 "response to zinc ion" evidence=IEP
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012156 AT1G49570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138278 AT4G08780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81755PER48_ARATH1, ., 1, 1, ., 1, ., 70.45720.86730.8094yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-130
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-71
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-51
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-12
cd00692328 cd00692, ligninase, Ligninase and other manganese- 4e-06
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 7e-06
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 3e-04
pfam00141180 pfam00141, peroxidase, Peroxidase 0.001
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  374 bits (963), Expect = e-130
 Identities = 134/329 (40%), Positives = 184/329 (55%), Gaps = 34/329 (10%)

Query: 43  LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
           L   +Y   CP+AE  VRS +      D ++ A LLRL FHDCF+ GCDASV LD +  N
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 103 ESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPV 162
            S   E+ A P+ +L+GFD I+ IK  LE ACPG+VSCAD LALA RD ++LAGGP Y V
Sbjct: 62  TS---EKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEV 118

Query: 163 FTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFI 222
             GRRD   S        +P P   +++++ LF+ +G +  + V+L GAH IG+  C   
Sbjct: 119 PLGRRDGRVSS-ANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 223 RNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRESTL 282
            +RLY+F GTG PDPT+   +  ++R  C  G                P+          
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDD---------DTLVPL---------- 218

Query: 283 GMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAY 342
                        +   FD  YY+NLL GRGLL +DQ L+++ +T  +V  YA++   A+
Sbjct: 219 ----------DPGTPNTFDNSYYKNLLAGRGLLTSDQALLSDPRTRAIVNRYAAN-QDAF 267

Query: 343 RTDFARVMLKMSNLGVLSGSQGQVRTNCS 371
             DFA  M+KM N+GVL+GSQG++R NC 
Sbjct: 268 FRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 377
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.98
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.97
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.24
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.4e-105  Score=779.48  Aligned_cols=297  Identities=38%  Similarity=0.734  Sum_probs=281.9

Q ss_pred             CCCCcCccccCChhHHHHHHHHHHHHHhcCCCCCcceeeeeeccccccCCCceeeccCCCCCCCCCCccCCCCCCCCchH
Q 035578           41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGF  120 (377)
Q Consensus        41 ~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSilLd~~~~~~~E~~~~~~~~N~~L~g~  120 (377)
                      ++|+++||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++   ..||++   ++|.+|+||
T Consensus        23 ~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a---~~N~~l~Gf   96 (324)
T PLN03030         23 QGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTA---LPNLLLRGY   96 (324)
T ss_pred             ccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccC---CCCcCcchH
Confidence            46999999999999999999999999999999999999999999999999999999964   369999   999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCHHHHHHhhhHhHHHhhCCCCcccccCccCCCCccccccccCCCCCCCCHHHHHHHHHHcCC
Q 035578          121 DKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGF  200 (377)
Q Consensus       121 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl  200 (377)
                      ++|+.||++||++||++||||||||+||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl  175 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL  175 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999999999999877774 899999999999999999999


Q ss_pred             CccccceeeccccccccccccccccccccCCCC-CCCCCCCHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 035578          201 SPRETVSLIGAHNIGKISCQFIRNRLYDFLGTG-QPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRE  279 (377)
Q Consensus       201 s~~elVaLsGAHTiG~ahc~~f~~Rl~~~~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~~~~~~r~~~~  279 (377)
                      +.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|+.+|++.||..+...                     
T Consensus       176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~---------------------  234 (324)
T PLN03030        176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGS---------------------  234 (324)
T ss_pred             CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCC---------------------
Confidence            999999999999999999999999999999875 5899999999999999999532221                     


Q ss_pred             cccccccccccccCCCCCCcccHHHHHHHhcCCccccchhhhccChhHHHHHHHHhhcchh----HHHHHHHHHHHHHHc
Q 035578          280 STLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGT----AYRTDFARVMLKMSN  355 (377)
Q Consensus       280 ~~~~~~lD~~~~~~~~Tp~~FDN~Yy~nl~~~~glL~SDq~L~~d~~T~~~V~~yA~d~~~----~F~~~Fa~Am~KM~~  355 (377)
                        ..++||+.      ||.+|||+||+||+.++|+|+|||+|+.|++|+++|++||.| +.    +||++|++||+|||+
T Consensus       235 --~~~~lD~~------Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~-~~~~~~~F~~~Fa~AmvKMg~  305 (324)
T PLN03030        235 --RRIALDTG------SSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGV-RGLAGLNFNVEFGRSMVKMSN  305 (324)
T ss_pred             --ccccCCCC------CCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcc-cccchhhhHHHHHHHHHHHcc
Confidence              35779988      999999999999999999999999999999999999999987 64    999999999999999


Q ss_pred             CCCCCCCCCcccccccccC
Q 035578          356 LGVLSGSQGQVRTNCSLSL  374 (377)
Q Consensus       356 lgv~tg~~GEIR~~C~~vN  374 (377)
                      |+||||.+|||||+|+++|
T Consensus       306 i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        306 IGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             CCCCCCCCCceeccccccC
Confidence            9999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 7e-58
1sch_A294 Peanut Peroxidase Length = 294 3e-57
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 1e-52
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 6e-52
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 4e-50
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-49
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-49
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-49
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 3e-49
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 3e-49
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-49
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-49
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 4e-49
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 4e-49
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-48
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-48
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-47
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-45
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 3e-41
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 9e-08
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-07
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 1e-07
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 38/334 (11%)
Query: 41  LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
           ++L   +Y   CP+A   VRS + Q    D ++ A+L+RL FHDCF+ GCDAS+ LDD+ 
Sbjct: 1   MQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG 60
Query: 101 GNESHPIERQAIPS-QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
             +S   E+ A P+  + +GF+ ++ IK  LE ACPG+VSC+D LALA+   + LAGGP 
Sbjct: 61  SIQS---EKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISC 219
           + V  GRRDS+ +    A + IP P + L+ I   FS  G +  + V+L GAH  G+  C
Sbjct: 118 WTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLC-GDGNQTSLHGXXXXXXXXXXXXXXGMR 278
               NRL++F GTG PDPT++   L  ++ LC  +G+ +++                   
Sbjct: 178 GVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTIT------------------ 219
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAE--EKTAKLVWAYAS 336
                       +  +S+   FD +Y+ NL    GLL +DQ+L +     T  +V ++AS
Sbjct: 220 ------------NLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFAS 267
Query: 337 DCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
           +  T +   FA+ M+ M N+  L+GS G++R +C
Sbjct: 268 N-QTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-125
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-124
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-123
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-121
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-118
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-117
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-116
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 5e-60
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-52
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 5e-47
2e39_A344 Peroxidase; heme protein, coordination geometry of 7e-47
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-45
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-44
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 8e-44
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 9e-13
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 1e-08
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  361 bits (929), Expect = e-125
 Identities = 117/338 (34%), Positives = 171/338 (50%), Gaps = 39/338 (11%)

Query: 43  LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
           L+  +Y   CP AE  V+  +A  ++ +  +   L+R+ FHDCF+ GCDASV LD +  N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 103 ESHPIERQAIP-SQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
            +   E+ AIP + +L+GF+ I   K  +E ACP  VSCAD LA A RD   LAG   Y 
Sbjct: 62  TA---EKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQ 118

Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
           V +GRRD   S   EA A+IP P  +  ++++ F+ +  +  E V+L GAH+IG   C  
Sbjct: 119 VPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSS 178

Query: 222 IRNRLYDFLGTGQPDPTMSDDFLVEMRVLC---GDGNQTSLHGSPAPASAPAPMRSSGMR 278
             NRLY+F      DPT+S  +   +R  C                       +      
Sbjct: 179 FTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPIT----------VSL------ 222

Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDC 338
                          I + +  D  YY  +    GLL +DQ L+ E   +  V A A + 
Sbjct: 223 --------------DIITPSVLDNMYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMN- 267

Query: 339 GTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSLSLNS 376
            TA+ + FA+ M+KM  + VL+G+QG++RTNCS+ +NS
Sbjct: 268 LTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV-VNS 304
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=2.7e-107  Score=793.48  Aligned_cols=299  Identities=38%  Similarity=0.647  Sum_probs=290.1

Q ss_pred             CCcCccccCChhHHHHHHHHHHHHHhcCCCCCcceeeeeeccccccCCCceeeccCCCCCCCCCCccCCCCCC-CCchHH
Q 035578           43 LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQ-TLKGFD  121 (377)
Q Consensus        43 L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSilLd~~~~~~~E~~~~~~~~N~-~L~g~~  121 (377)
                      |+++||++|||++|+|||+.|++++.+|++++|++||||||||||+||||||||++++++.+|+++   ++|. +|+||+
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~---~~N~~~lrgf~   78 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDA---IPNNPSLRGFE   78 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGS---TTTTTTCCCHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccC---CCcccchHHHH
Confidence            789999999999999999999999999999999999999999999999999999998888899999   9998 899999


Q ss_pred             HHHHHHHHHHhhCCCCCCHHHHHHhhhHhHHHhhCCCCcccccCccCCCCccccccccCCCCCCCCHHHHHHHHHHcCCC
Q 035578          122 KINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS  201 (377)
Q Consensus       122 ~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gls  201 (377)
                      +|++||++||++||++||||||||||||+||+++|||.|+|++||+|+++++..+++++||+|+.++++|++.|++|||+
T Consensus        79 vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T 3hdl_A           79 VITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLT  158 (304)
T ss_dssp             HHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             ccccceeeccccccccccccccccccccCCCCCCCCCCCHHHHHHHHhhcCCCCC--CCCCCCCCCCCCCCCCCCCCccc
Q 035578          202 PRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQ--TSLHGSPAPASAPAPMRSSGMRE  279 (377)
Q Consensus       202 ~~elVaLsGAHTiG~ahc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~~~~~~~~~~~~r~~~~  279 (377)
                      .+||||||||||||++||.+|.+|||||+|++.+||+||+.|++.|+..||..++  +.                     
T Consensus       159 ~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~---------------------  217 (304)
T 3hdl_A          159 ADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTP---------------------  217 (304)
T ss_dssp             HHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSC---------------------
T ss_pred             HHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCc---------------------
Confidence            9999999999999999999999999999999889999999999999999997543  32                     


Q ss_pred             cccccccccccccCCCCCCcccHHHHHHHhcCCccccchhhhccChhHHHHHHHHhhcchhHHHHHHHHHHHHHHcCCCC
Q 035578          280 STLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTAYRTDFARVMLKMSNLGVL  359 (377)
Q Consensus       280 ~~~~~~lD~~~~~~~~Tp~~FDN~Yy~nl~~~~glL~SDq~L~~d~~T~~~V~~yA~d~~~~F~~~Fa~Am~KM~~lgv~  359 (377)
                        +.++||+.      ||.+|||+||+||+.++|||+|||+|+.|++|+++|++||.| |++||++|++||+||++|+|+
T Consensus       218 --~~~~lD~~------TP~~FDN~Yy~nL~~~~glL~SDq~L~~d~~t~~~V~~yA~~-~~~F~~~Fa~AmvKmg~igv~  288 (304)
T 3hdl_A          218 --ITVSLDII------TPSVLDNMYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMN-LTAWASKFAQAMVKMGQIEVL  288 (304)
T ss_dssp             --CEEESCSS------STTSCSTHHHHHHHTTCCCSHHHHGGGSSHHHHHHHHHHHHC-HHHHHHHHHHHHHHHTTTTCC
T ss_pred             --cccCCCCC------CcccccHHHHHHHHhCcCCCCCCHHHhcCccHHHHHHHhccC-HHHHHHHHHHHHHHHHhcCCC
Confidence              57889988      999999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             CCCCCcccccccccC
Q 035578          360 SGSQGQVRTNCSLSL  374 (377)
Q Consensus       360 tg~~GEIR~~C~~vN  374 (377)
                      ||.+||||++|++||
T Consensus       289 tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          289 TGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CTTSSBCCSBTTBCC
T ss_pred             CCCCCeeeCCccccC
Confidence            999999999999999
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 377
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 5e-95
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 6e-94
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 3e-89
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-88
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-85
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-84
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 9e-48
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-46
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-45
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 6e-33
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-28
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-25
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  283 bits (726), Expect = 5e-95
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 36/332 (10%)

Query: 43  LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
           L   +YR+ CP+    V   +      D ++ A+L+RL FHDCF+ GCD SV L++++  
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 103 ESHPIERQAIPSQTL-KGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
           E    E+ A+P+    +G D +N IK  +E +CP  VSCAD LA+A     +L GGP +P
Sbjct: 62  E---SEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWP 118

Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
           V  GRRDS+ +    A   +P P  +L ++   F+++G +  + V+L G H  G+  C  
Sbjct: 119 VPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCST 178

Query: 222 IRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMREST 281
             NRLY+F  TG PDPT++  +L  +R  C          +   ++              
Sbjct: 179 FINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQ----------- 227

Query: 282 LGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEE--KTAKLVWAYASDCG 339
                             FD  YY NLL+  GLL +DQ+L +     T  +V +++S+  
Sbjct: 228 ------------------FDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSN-Q 268

Query: 340 TAYRTDFARVMLKMSNLGVLSGSQGQVRTNCS 371
             + ++F   M+KM N+GVL+G +G++R  C+
Sbjct: 269 NTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCN 300
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.96
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=8.7e-102  Score=754.14  Aligned_cols=301  Identities=36%  Similarity=0.661  Sum_probs=290.1

Q ss_pred             CCCcCccccCChhHHHHHHHHHHHHHhcCCCCCcceeeeeeccccccCCCceeeccCCCCCCCCCCccCCCCCCCC-chH
Q 035578           42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTL-KGF  120 (377)
Q Consensus        42 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSilLd~~~~~~~E~~~~~~~~N~~L-~g~  120 (377)
                      ||+.+||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++.++.+|+++   ++|.++ +||
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~---~~N~~~~~g~   77 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDA---LPNINSIRGL   77 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGS---TTTTTTCCCH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccC---CcccccchhH
Confidence            7999999999999999999999999999999999999999999999999999999998888899999   999975 999


Q ss_pred             HHHHHHHHHHHhhCCCCCCHHHHHHhhhHhHHHhhCCCCcccccCccCCCCccccccccCCCCCCCCHHHHHHHHHHcCC
Q 035578          121 DKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGF  200 (377)
Q Consensus       121 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl  200 (377)
                      ++|+.||++||+.||++||||||||||||+||+++|||.|+|++||+|+.+++..++..+||.|+.++++|++.|++|||
T Consensus        78 ~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  157 (304)
T d1fhfa_          78 DVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGL  157 (304)
T ss_dssp             HHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999999888888999999999999999999999


Q ss_pred             CccccceeeccccccccccccccccccccCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 035578          201 SPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGSPAPASAPAPMRSSGMRES  280 (377)
Q Consensus       201 s~~elVaLsGAHTiG~ahc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~~~~~~r~~~~~  280 (377)
                      +.+|||||+||||||++||.+|.+|||+|.+++.+||++++.|+..|+..||..+...                      
T Consensus       158 ~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~----------------------  215 (304)
T d1fhfa_         158 NTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGD----------------------  215 (304)
T ss_dssp             CHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSC----------------------
T ss_pred             CHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCC----------------------
Confidence            9999999999999999999999999999999999999999999999999999765443                      


Q ss_pred             ccccccccccccCCCCCCcccHHHHHHHhcCCccccchhhhccCh--hHHHHHHHHhhcchhHHHHHHHHHHHHHHcCCC
Q 035578          281 TLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEE--KTAKLVWAYASDCGTAYRTDFARVMLKMSNLGV  358 (377)
Q Consensus       281 ~~~~~lD~~~~~~~~Tp~~FDN~Yy~nl~~~~glL~SDq~L~~d~--~T~~~V~~yA~d~~~~F~~~Fa~Am~KM~~lgv  358 (377)
                       +.+.+|+.      ||.+|||+||++++.++|+|+|||+|+.|+  +|+++|++||.| +++|+++|++||+||++|+|
T Consensus       216 -~~~~~d~~------tp~~fDn~Yy~~l~~~~glL~SD~~L~~dp~~~t~~~V~~yA~d-~~~F~~~F~~Am~Km~~lgv  287 (304)
T d1fhfa_         216 -NLTNLDLS------TPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSN-QNTFFSNFRVSMIKMGNIGV  287 (304)
T ss_dssp             -CEEESCSS------STTSCSTHHHHHHHTTCCSSHHHHTTTSSTTCSSHHHHHHHHHC-HHHHHHHHHHHHHHHTTTTC
T ss_pred             -cccccCCC------CCCccccHHHHHHhhcCcccHhhHHHHhCCCchHHHHHHHHhhC-HHHHHHHHHHHHHHHhcCCC
Confidence             46778877      999999999999999999999999999997  699999999999 99999999999999999999


Q ss_pred             CCCCCCcccccccccCC
Q 035578          359 LSGSQGQVRTNCSLSLN  375 (377)
Q Consensus       359 ~tg~~GEIR~~C~~vN~  375 (377)
                      |||.+|||||+|+++|+
T Consensus       288 ~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         288 LTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             CCTTSSBCCSBTTBCCC
T ss_pred             CCCCCCcccCcccCcCC
Confidence            99999999999999995
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure