Citrus Sinensis ID: 035624
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 775 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FYC1 | 817 | Cation/H(+) antiporter 4 | yes | no | 0.974 | 0.924 | 0.368 | 1e-132 | |
| Q9FFB8 | 822 | Cation/H(+) antiporter 3 | no | no | 0.969 | 0.913 | 0.360 | 1e-126 | |
| Q58P71 | 816 | Cation/H(+) antiporter 8 | no | no | 0.966 | 0.917 | 0.339 | 1e-113 | |
| Q9FFB7 | 800 | Cation/H(+) antiporter 9 | no | no | 0.932 | 0.903 | 0.332 | 1e-109 | |
| Q8GX92 | 818 | Cation/H(+) antiporter 6A | no | no | 0.976 | 0.925 | 0.325 | 1e-108 | |
| Q58P69 | 783 | Cation/H(+) antiporter 10 | no | no | 0.922 | 0.913 | 0.331 | 1e-107 | |
| Q3EDG3 | 815 | Cation/H(+) antiporter 5 | no | no | 0.948 | 0.901 | 0.329 | 1e-107 | |
| Q9FYC0 | 770 | Cation/H(+) antiporter 12 | no | no | 0.878 | 0.884 | 0.322 | 1e-104 | |
| P0CG16 | 796 | Cation/H(+) antiporter 6B | no | no | 0.962 | 0.937 | 0.333 | 1e-104 | |
| Q9FYB9 | 783 | Cation/H(+) antiporter 11 | no | no | 0.84 | 0.831 | 0.371 | 1e-104 |
| >sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 | Back alignment and function desciption |
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Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 294/798 (36%), Positives = 451/798 (56%), Gaps = 43/798 (5%)
Query: 15 MCINLPPEVNSAGL--VMQFEDGVKEYKWLDYTTPRIMLLLATMFTISQVFHSVLKRFGI 72
+C LP +S+GL + D ++ +Y P + ++ + + Q FH L+R G+
Sbjct: 21 ICGILPINPSSSGLWPSPKLPDPQANIEFWNYMFPHVQIIFLIVTILWQFFHFFLRRLGM 80
Query: 73 PIFISQIFVSILTFDDFFLVIKMENKIITPEHVQ--LIGSMGNIGIALFIFQSGVKMDLS 130
F S + IL F K ++ E + L G +G +F F GVKMDLS
Sbjct: 81 IRFTSHMLTGILLSKSFLKENTPARKFLSTEDYKETLFGLVGACSYMMFWFLMGVKMDLS 140
Query: 131 MVSKVGRKALYIGILSVI-SPLVALIPTFMVPTGTGPSG----------FFITPLYYVTS 179
++ GRKA+ IG+ SV+ S V + F++ G FI + ++S
Sbjct: 141 LIRSTGRKAVAIGLSSVLLSITVCALIFFLILRDVGTKKGEPVMSFFEIIFIYLIQCLSS 200
Query: 180 FPVIFCLLTHLKILNSELGRLAQSSAIVADF----LSYATVLLLTVSQVASSSPA----- 230
FPVI LL L++ NSELGRLA SSA+++DF LS V L + S +
Sbjct: 201 FPVIGNLLFELRLQNSELGRLAMSSAVISDFSTSILSAVLVFLKELKDDKSRLGSVFIGD 260
Query: 231 -----QALRTLGYVVFFIFIVMVVVRPAMLLIVRMTPEGKEVSQTGLYVVILILLLFLSF 285
+ ++ G VV F+ + + RP M I++ TP G+ V + Y+ +I+L+F S
Sbjct: 261 VIVGNRPMKRAGTVVLFVCFAIYIFRPLMFFIIKRTPSGRPVKK--FYIYAIIILVFGSA 318
Query: 286 ARKFYSELTV-AGLYIVGLAVPRGPPLGSALVNKFDCLVSGFFLPIFVTTSAMRIHDLRP 344
+ + ++ G +I+GLAVP GPPLGSA++ KF+ +V G FLP FV TSA I
Sbjct: 319 ILADWCKQSIFIGPFILGLAVPHGPPLGSAILQKFESVVFGTFLPFFVATSAEEIDTSIL 378
Query: 345 QSFNIFIVQNILTVAWIVLVKFGTCSLLLLYWKMHKNDAMALALIMNAKGIVEMAFYTFA 404
QS+ I + ++ V+ +VKF +L + M D +AL+LIM+ KGI E Y +A
Sbjct: 379 QSW-IDLKSIVILVSVSFIVKFALTTLPAFLYGMPAKDCIALSLIMSFKGIFEFGAYGYA 437
Query: 405 SDGRYVPPNMFRFMLGIIIVMGSIVPIFVRKLYDPSRKYAGYQIKKLVDCKPESELQIVC 464
+ P F + I++ +++P ++++YDPSR YAGY+ + ++ KP SEL+I+
Sbjct: 438 YQRGTIRPVTFTVLSLYILLNSAVIPPLLKRIYDPSRMYAGYEKRNMLHMKPNSELRILS 497
Query: 465 CIYIPSNISSAINLLSISCPRNECPTVVNALHLIKLSDQATSIFVSHQKKKKNFSAYSY- 523
CIY +I INLL +CP E P LHL++L QA + +SH+ + + SY
Sbjct: 498 CIYKTDDIRPMINLLEATCPSRENPVATYVLHLMELVGQANPVLISHRLQTRKSENMSYN 557
Query: 524 SENVIVSFKKFGGLRWGAVSINTFTAISPLDLMHDDICTLALDKLASLVILSFHRTWYID 583
SENV+VSF++F +G+V ++T+TA+S +MH DIC LAL+ SL+IL FH+TW D
Sbjct: 558 SENVVVSFEQFHNDFFGSVFVSTYTALSVPKMMHGDICMLALNNTTSLIILPFHQTWSAD 617
Query: 584 GS-LESDDQSVRNLNLRILEKAPCSVGILI-DHGNLKRSVTHMDSSADSFSKVALLFLGG 641
GS + SD +R LN +L+ +PCSVGI + N +R++ ++ S+ +V +LFLGG
Sbjct: 618 GSAIVSDSLMIRQLNKSVLDLSPCSVGIFVYRSSNGRRTIKETAANFSSY-QVCMLFLGG 676
Query: 642 NDDREALTLAKRMGRDNKVRLTVVHFIAASDDGD--VDWETILDSEVLRDIKKT----EC 695
DDREAL+LAKRM RD+++ +TVV I++ + DW+ +LD E+LRD+K
Sbjct: 677 KDDREALSLAKRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDVKSNVLAGAD 736
Query: 696 MRYEKHVVENGADTVEIVHSMVNQYDLIIVGRRHNLECPQTSCLDQWSEFPELGVLGDLL 755
+ + + VV + T +++ S+ N+YDL IVGR + T L++WSEF ELG++GDLL
Sbjct: 737 IVFSEEVVNDANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFEELGIIGDLL 796
Query: 756 ASKDFGNKCSVLVVQQQR 773
S+D + SVLV+QQQ+
Sbjct: 797 TSQDLNCQASVLVIQQQQ 814
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May operate as a cation/H(+) antiporter. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q58P71|CHX8_ARATH Cation/H(+) antiporter 8 OS=Arabidopsis thaliana GN=CHX8 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FFB7|CHX9_ARATH Cation/H(+) antiporter 9 OS=Arabidopsis thaliana GN=CHX9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8GX92|CHX6A_ARATH Cation/H(+) antiporter 6A OS=Arabidopsis thaliana GN=CHX6a PE=2 SV=2 | Back alignment and function description |
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| >sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q3EDG3|CHX5_ARATH Cation/H(+) antiporter 5 OS=Arabidopsis thaliana GN=CHX5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FYC0|CHX12_ARATH Cation/H(+) antiporter 12 OS=Arabidopsis thaliana GN=CHX12 PE=2 SV=2 | Back alignment and function description |
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| >sp|P0CG16|CHX6B_ARATH Cation/H(+) antiporter 6B OS=Arabidopsis thaliana GN=CHX6b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FYB9|CHX11_ARATH Cation/H(+) antiporter 11 OS=Arabidopsis thaliana GN=CHX11 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 775 | ||||||
| 225434429 | 764 | PREDICTED: cation/H(+) antiporter 3-like | 0.945 | 0.959 | 0.442 | 1e-170 | |
| 255564875 | 776 | monovalent cation:proton antiporter, put | 0.953 | 0.952 | 0.436 | 1e-169 | |
| 224091881 | 701 | cation proton exchanger [Populus trichoc | 0.852 | 0.942 | 0.439 | 1e-147 | |
| 356529113 | 777 | PREDICTED: cation/H(+) antiporter 3-like | 0.958 | 0.956 | 0.403 | 1e-146 | |
| 224142305 | 782 | cation proton exchanger [Populus trichoc | 0.952 | 0.943 | 0.396 | 1e-145 | |
| 297745811 | 1497 | unnamed protein product [Vitis vinifera] | 0.885 | 0.458 | 0.399 | 1e-144 | |
| 224143840 | 783 | cation proton exchanger [Populus trichoc | 0.947 | 0.937 | 0.407 | 1e-143 | |
| 255565469 | 790 | monovalent cation:proton antiporter, put | 0.953 | 0.935 | 0.394 | 1e-142 | |
| 449452132 | 770 | PREDICTED: cation/H(+) antiporter 4-like | 0.941 | 0.948 | 0.387 | 1e-141 | |
| 449463487 | 795 | PREDICTED: cation/H(+) antiporter 3-like | 0.969 | 0.944 | 0.379 | 1e-139 |
| >gi|225434429|ref|XP_002277574.1| PREDICTED: cation/H(+) antiporter 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 345/780 (44%), Positives = 474/780 (60%), Gaps = 47/780 (6%)
Query: 16 CINLPPEVNSAGLVMQFEDGVKEYKWLDYTTPRIMLLLATMFTISQVFHSVLKRFGIPIF 75
C LPP+VNS G V ++E G L + P + + + + + H VLK G+P+
Sbjct: 8 CTELPPKVNSFG-VWKYEKGP-----LKFPLPLLQMQILAILAVIHTLHFVLKHLGLPML 61
Query: 76 ISQIFV----------SILTFDDFFLVIKMENKIITPEHVQLIGSMGNIGIALFIFQSGV 125
IS+I +I + + FL ++ +N +IG++ G LF+F GV
Sbjct: 62 ISEIAAGLLLGGSALGNISAYSEMFLNVESQN---------IIGTLSIFGYTLFMFLIGV 112
Query: 126 KMDLSMVSKVGRKALYIGILSVISPLVALIPT------FMVPTGTGPSGFFITPLYYVTS 179
KMD+ M+S G+KAL +GIL+++ PL+ + F T + +I ++ +T
Sbjct: 113 KMDMGMISNTGKKALAVGILALLGPLIVGMAVAVICLEFWAKEATNLT--YIAAVHSLTP 170
Query: 180 FPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATVLLLTVSQVASSSPAQ-ALRTLGY 238
FPVI CLL+ LKILNSELGRLA SSAIV+D S ++ V + +P A+ T+
Sbjct: 171 FPVIACLLSELKILNSELGRLALSSAIVSDLFSLFLTIVSVVVRTREGAPWHTAVVTVVS 230
Query: 239 VVFFIFIVMVVVRPAMLLIVRMTPEGKEVSQTGLYVVILILLLFLSFARKFYSELTVAGL 298
V F+ +V+ ++RPAM +V TPEG+ V +Y +IL LLF F+ + + G
Sbjct: 231 PVVFVLVVVYILRPAMFWVVAQTPEGRAVKNVYIYAIIL-GLLFCGIFSDFFGQYVIFGA 289
Query: 299 YIVGLAVPRGPPLGSALVNKFDCLVSGFFLPIFVTTSAMRIHDLRP-QSFNIFIVQNILT 357
+I GLAVP GPPLGSALV K D +VS +PIF+ T AMR + + + + V NI
Sbjct: 290 FIFGLAVPDGPPLGSALVEKLDSMVSLVLMPIFMATCAMRANVIDVFRKGDKETVANIFI 349
Query: 358 VAWIVLVKFGTCSLLLLYWKMHKNDAMALALIMNAKGIVEMAFYTFASDGRYVPPNMFRF 417
+ ++ K G C LLY KM NDA+AL+LIM+AKG V MA + D V +F
Sbjct: 350 ILATLIAKIGACVAPLLYCKMPCNDALALSLIMSAKGTVNMATQSVLRDSGVVDDEIFGL 409
Query: 418 MLGIIIVMGSIVPIFVRKLYDPSRKYAGYQIKKLVDCKPESELQIVCCIYIPSNISSAIN 477
M+ + +IVP VRKLYDPSRKYAGYQ + ++ CKP +EL+I+ C++ ++S IN
Sbjct: 410 MVIATTLNAAIVPFLVRKLYDPSRKYAGYQTRNIMHCKPNAELRILACVHEQEGVTSIIN 469
Query: 478 LLSISCPRNECPTVVNALHLIKLSDQATSIFVSHQKKKKNFSAYSYSENVIVSFKKFGGL 537
LL+ S P + P + LHLI+L +AT IF+SH +K+ S +SYSENVI++ ++
Sbjct: 470 LLNASNPTRDNPISIYVLHLIELVGRATPIFISHDMQKRTVSNHSYSENVILALNRYQRN 529
Query: 538 RWGAVSINTFTAISPLDLMHDDICTLALDKLASLVILSFHRTWYIDGSLESDDQSVRNLN 597
GA + FTAISP LMH+DICTLAL+KLA +I+ FHR W I GS+ESD+Q +RNLN
Sbjct: 530 NGGAALTHVFTAISPHKLMHEDICTLALNKLALFMIIPFHRKWNIGGSIESDEQRIRNLN 589
Query: 598 LRILEKAPCSVGILIDHGNLKRSVTHMDSSADSFSKVALLFLGGNDDREALTLAKRMGRD 657
+L+ APCSVGIL+D L R S++ SF +AL+FLGGNDDRE L AKRM
Sbjct: 590 CSVLDMAPCSVGILVDRAQLGR------SASQSF-YIALIFLGGNDDREGLAYAKRMVSG 642
Query: 658 NKVRLTVVHFIAASDDGDVDWETILDSEVLRDIKKT----ECMRYEKHVVENGADTVEIV 713
V LT+ HF+ D+ +WE ILD E L+DIK + E + Y + VV++G +T IV
Sbjct: 643 PNVNLTIAHFLPMDDENTNEWENILDDEALKDIKHSNLGFEQVNYLQRVVKDGPETALIV 702
Query: 714 HSMVNQYDLIIVGRRHNLECPQTSCLDQWSEFPELGVLGDLLASKDFGNKCSVLVVQQQR 773
SM +QYDLIIVGRRH +E P TS L +WSEFPELG LGDLLA+ D + SVLVVQQQR
Sbjct: 703 RSMTSQYDLIIVGRRHGVESPLTSGLTEWSEFPELGALGDLLAASDLDSNASVLVVQQQR 762
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255564875|ref|XP_002523431.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223537321|gb|EEF38951.1| monovalent cation:proton antiporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224091881|ref|XP_002309384.1| cation proton exchanger [Populus trichocarpa] gi|222855360|gb|EEE92907.1| cation proton exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356529113|ref|XP_003533141.1| PREDICTED: cation/H(+) antiporter 3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224142305|ref|XP_002324499.1| cation proton exchanger [Populus trichocarpa] gi|222865933|gb|EEF03064.1| cation proton exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297745811|emb|CBI15867.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224143840|ref|XP_002325093.1| cation proton exchanger [Populus trichocarpa] gi|222866527|gb|EEF03658.1| cation proton exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255565469|ref|XP_002523725.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223537029|gb|EEF38665.1| monovalent cation:proton antiporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449452132|ref|XP_004143814.1| PREDICTED: cation/H(+) antiporter 4-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449463487|ref|XP_004149465.1| PREDICTED: cation/H(+) antiporter 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 775 | ||||||
| TAIR|locus:2082142 | 817 | CHX4 "cation/H+ exchanger 4" [ | 0.775 | 0.735 | 0.374 | 6.4e-125 | |
| TAIR|locus:2172631 | 822 | CHX3 "cation/H+ exchanger 3" [ | 0.765 | 0.721 | 0.368 | 2.2e-120 | |
| TAIR|locus:2082102 | 783 | CHX10 "cation/H+ exchanger 10" | 0.932 | 0.923 | 0.321 | 1.3e-98 | |
| TAIR|locus:2205165 | 815 | ATCHX5 [Arabidopsis thaliana ( | 0.961 | 0.914 | 0.317 | 2.2e-96 | |
| TAIR|locus:2205150 | 818 | CHX6A "cation/H+ exchanger 6A" | 0.976 | 0.925 | 0.314 | 4.7e-96 | |
| TAIR|locus:2054152 | 821 | CHX15 "cation/hydrogen exchang | 0.798 | 0.753 | 0.300 | 8.9e-94 | |
| TAIR|locus:2172646 | 800 | CHX9 "cation/H+ exchanger 9" [ | 0.793 | 0.768 | 0.348 | 4.6e-89 | |
| TAIR|locus:2007392 | 829 | CHX14 "cation/hydrogen exchang | 0.929 | 0.868 | 0.278 | 6e-80 | |
| TAIR|locus:2060827 | 831 | ATCHX13 [Arabidopsis thaliana | 0.929 | 0.866 | 0.283 | 6.2e-78 | |
| TAIR|locus:2090462 | 800 | CHX19 "cation/H+ exchanger 19" | 0.92 | 0.891 | 0.271 | 4.4e-68 |
| TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1008 (359.9 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 235/627 (37%), Positives = 350/627 (55%)
Query: 170 FITPLYYVTSFPVIFCLLTHLKILNSELGRLAQSSAIVADF----LSYATVLLLTXXXXX 225
FI + ++SFPVI LL L++ NSELGRLA SSA+++DF LS V L
Sbjct: 191 FIYLIQCLSSFPVIGNLLFELRLQNSELGRLAMSSAVISDFSTSILSAVLVFLKELKDDK 250
Query: 226 XXXXXXXL----------RTLGYXXXXXXXXXXXXRPAMLLIVRMTPEGKEVSQTGXXXX 275
+ + G RP M I++ TP G+ V +
Sbjct: 251 SRLGSVFIGDVIVGNRPMKRAGTVVLFVCFAIYIFRPLMFFIIKRTPSGRPVKKFYIYAI 310
Query: 276 XXXXXXXXSFARKFYSELTVAGLYIVGLAVPRGPPLGSALVNKFDCLVSGFFLPIFVTTS 335
A + + G +I+GLAVP GPPLGSA++ KF+ +V G FLP FV TS
Sbjct: 311 IILVFGSAILA-DWCKQSIFIGPFILGLAVPHGPPLGSAILQKFESVVFGTFLPFFVATS 369
Query: 336 AMRIHDLRPQSFNIFIVQNILTVAWIVLVKFGTCSLLLLYWKMHKNDAMALALIMNAKGI 395
A I QS+ I + ++ V+ +VKF +L + M D +AL+LIM+ KGI
Sbjct: 370 AEEIDTSILQSW-IDLKSIVILVSVSFIVKFALTTLPAFLYGMPAKDCIALSLIMSFKGI 428
Query: 396 VEMAFYTFASDGRYVPPNMFRFMLGIIIVMGSIVPIFVRKLYDPSRKYAGYQIKKLVDCK 455
E Y +A + P F + I++ +++P ++++YDPSR YAGY+ + ++ K
Sbjct: 429 FEFGAYGYAYQRGTIRPVTFTVLSLYILLNSAVIPPLLKRIYDPSRMYAGYEKRNMLHMK 488
Query: 456 PESELQIVCCIYXXXXXXXXXXXXXXXCPRNECPTVVNALHLIKLSDQATSIFVSHQKKK 515
P SEL+I+ CIY CP E P LHL++L QA + +SH+ +
Sbjct: 489 PNSELRILSCIYKTDDIRPMINLLEATCPSRENPVATYVLHLMELVGQANPVLISHRLQT 548
Query: 516 KNFSAYSY-SENVIVSFKKFGGLRWGAVSINTFTAISPLDLMHDDICTLALDKLASLVIL 574
+ SY SENV+VSF++F +G+V ++T+TA+S +MH DIC LAL+ SL+IL
Sbjct: 549 RKSENMSYNSENVVVSFEQFHNDFFGSVFVSTYTALSVPKMMHGDICMLALNNTTSLIIL 608
Query: 575 SFHRTWYIDGS-LESDDQSVRNLNLRILEKAPCSVGILIDHG-NLKRSVTHMDSSADSFS 632
FH+TW DGS + SD +R LN +L+ +PCSVGI + N +R++ ++ S+
Sbjct: 609 PFHQTWSADGSAIVSDSLMIRQLNKSVLDLSPCSVGIFVYRSSNGRRTIKETAANFSSY- 667
Query: 633 KVALLFLGGNDDREALTLAKRMGRDNKVRLTVVHFIAASDDGD--VDWETILDSEVLRDI 690
+V +LFLGG DDREAL+LAKRM RD+++ +TVV I++ + DW+ +LD E+LRD+
Sbjct: 668 QVCMLFLGGKDDREALSLAKRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDV 727
Query: 691 KKTEC----MRYEKHVVENGADTVEIVHSMVNQYDLIIVGRRHNLECPQTSCLDQWSEFP 746
K + + + VV + T +++ S+ N+YDL IVGR + T L++WSEF
Sbjct: 728 KSNVLAGADIVFSEEVVNDANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFE 787
Query: 747 ELGVLGDLLASKDFGNKCSVLVVQQQR 773
ELG++GDLL S+D + SVLV+QQQ+
Sbjct: 788 ELGIIGDLLTSQDLNCQASVLVIQQQQ 814
|
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| TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2205165 ATCHX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2205150 CHX6A "cation/H+ exchanger 6A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2172646 CHX9 "cation/H+ exchanger 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FYC1 | CHX4_ARATH | No assigned EC number | 0.3684 | 0.9741 | 0.9241 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00023997001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (1525 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 775 | |||
| PLN03159 | 832 | PLN03159, PLN03159, cation/H(+) antiporter 15; Pro | 1e-127 | |
| COG0475 | 397 | COG0475, KefB, Kef-type K+ transport systems, memb | 3e-26 | |
| pfam00999 | 370 | pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang | 7e-22 | |
| TIGR00932 | 273 | TIGR00932, 2a37, transporter, monovalent cation:pr | 1e-08 | |
| pfam00582 | 139 | pfam00582, Usp, Universal stress protein family | 0.001 |
| >gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional | Back alignment and domain information |
|---|
Score = 398 bits (1024), Expect = e-127
Identities = 249/774 (32%), Positives = 395/774 (51%), Gaps = 60/774 (7%)
Query: 42 LDYTTPRIMLLLATMFTISQVFHSVLKRFGIPIFISQIFVSILTFDDFF-LVIKMENKII 100
LD++ P +L L + +++ +LK F P IS+I ++ N I
Sbjct: 37 LDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIF 96
Query: 101 TPEHVQLIGSMGNIGIALFIFQSGVKMDLSMVSKVGRKALYIGILSVISP-LVALIPTFM 159
V ++ +M N+G+ F+F GV+MD+S++ + G+KAL I I + P + L +F+
Sbjct: 97 PLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFI 156
Query: 160 ---VPTGTGPSGF--FITPLYYVTSFPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYA 214
V F F+ VT+FPV+ +L +K++N+ELGR+A S+A+V D ++
Sbjct: 157 FHQVSRNVHQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWI 216
Query: 215 TVLL-LTVSQVASSSPAQALRTLGYVVFFIFIVMVVVRPAMLLIVRMTPEGKEVSQTGLY 273
+ L + +++ S+S A +L L V F+ VVRP + I+R TPEG+ S+ Y
Sbjct: 217 LLALAIALAENDSTSLA-SLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSE--FY 273
Query: 274 V-VILILLLFLSFARKFYSELTVAGLYIVGLAVPRGPPLGSALVNKFDCLVSGFFLPIFV 332
+ +IL ++ F +V G ++ GL +P GP LG L+ K + VSG LP+F
Sbjct: 274 ICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP-LGVTLIEKLEDFVSGLLLPLFF 332
Query: 333 TTSAMRIHDLRPQSFNIFIVQNILTVAWIVLVKFGTCS-------LLLLYWKMHKNDAMA 385
S ++ N+ +Q T +VLV + ++ ++ M + +
Sbjct: 333 AISGLKT--------NVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGIT 384
Query: 386 LALIMNAKGIVEMAFYTFASDGRYVPPNMFRFMLGIIIVMGSIVPIFVRKLYDPSRKYAG 445
L +MN KG+VEM D + F M+ + + M +++ V +Y P+R+ G
Sbjct: 385 LGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVG 444
Query: 446 YQIKKLVDCKPESELQIVCCIYIPSNISSAINLLSISCPRNECPTVVNALHLIKLSDQAT 505
Y+ + + K ++EL+++ C++ P N+ + INLL S P P + LHL++L+ +A+
Sbjct: 445 YKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRAS 504
Query: 506 SIFVSHQKKKKNFSAYS----YSENVIVSFKKFGGLRWGAVSINTFTAISPLDLMHDDIC 561
++ + H +K A + S+++I +F+ + G VS+ TAISP MH+D+C
Sbjct: 505 AMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQ-HAGCVSVQPLTAISPYSTMHEDVC 563
Query: 562 TLALDKLASLVILSFHRTWYIDGSLESDDQSVRNLNLRILEKAPCSVGILIDHGNLKRSV 621
LA DK SL+I+ FH+ +DG +E+ + + R +N +L APCSVGIL+D G S
Sbjct: 564 NLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRG---LSG 620
Query: 622 THMDSSADSFSKVALLFLGGNDDREALTLAKRMGRDNKVRLTVVHFIAASDDGDV----- 676
+S VA+LF GG DDREAL A RM + LTV+ FI D
Sbjct: 621 ATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPA 680
Query: 677 ---------------DWETILDSEVLRDIK----KTECMRYEKHVVENGADTVEIVHSMV 717
E LD E + + + E + Y + VV NG +TV + SM
Sbjct: 681 SSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMD 740
Query: 718 NQYDLIIVGRRHNLECPQTSCLDQWSEFPELGVLGDLLASKDFGNKCSVLVVQQ 771
+ +DL IVGR + P T+ L WSE PELG +GDLLAS DF SVLVVQQ
Sbjct: 741 SAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQ 794
|
Length = 832 |
| >gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family | Back alignment and domain information |
|---|
| >gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family | Back alignment and domain information |
|---|
| >gnl|CDD|216006 pfam00582, Usp, Universal stress protein family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 775 | |||
| PLN03159 | 832 | cation/H(+) antiporter 15; Provisional | 100.0 | |
| KOG1650 | 769 | consensus Predicted K+/H+-antiporter [Inorganic io | 100.0 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 100.0 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 100.0 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 100.0 | |
| COG0475 | 397 | KefB Kef-type K+ transport systems, membrane compo | 100.0 | |
| PRK05326 | 562 | potassium/proton antiporter; Reviewed | 100.0 | |
| TIGR00932 | 273 | 2a37 transporter, monovalent cation:proton antipor | 100.0 | |
| PF00999 | 380 | Na_H_Exchanger: Sodium/hydrogen exchanger family; | 100.0 | |
| COG4651 | 408 | RosB Kef-type K+ transport system, predicted NAD-b | 100.0 | |
| TIGR00844 | 810 | c_cpa1 na(+)/h(+) antiporter. This model is specif | 99.96 | |
| TIGR00831 | 525 | a_cpa1 Na+/H+ antiporter, bacterial form. This mod | 99.96 | |
| COG0025 | 429 | NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg | 99.93 | |
| COG3263 | 574 | NhaP-type Na+/H+ and K+/H+ antiporters with a uniq | 99.92 | |
| TIGR00840 | 559 | b_cpa1 sodium/hydrogen exchanger 3. This model is | 99.91 | |
| PRK11175 | 305 | universal stress protein UspE; Provisional | 99.82 | |
| PRK14853 | 423 | nhaA pH-dependent sodium/proton antiporter; Provis | 99.76 | |
| KOG4505 | 467 | consensus Na+/H+ antiporter [Inorganic ion transpo | 99.68 | |
| KOG1965 | 575 | consensus Sodium/hydrogen exchanger protein [Inorg | 99.58 | |
| cd01988 | 132 | Na_H_Antiporter_C The C-terminal domain of a subfa | 99.5 | |
| TIGR00773 | 373 | NhaA Na+/H+ antiporter NhaA. These proteins are me | 99.47 | |
| PRK15456 | 142 | universal stress protein UspG; Provisional | 99.3 | |
| PRK15005 | 144 | universal stress protein F; Provisional | 99.28 | |
| PRK14856 | 438 | nhaA pH-dependent sodium/proton antiporter; Provis | 99.21 | |
| cd01989 | 146 | STK_N The N-terminal domain of Eukaryotic Serine T | 99.2 | |
| PRK15118 | 144 | universal stress global response regulator UspA; P | 99.17 | |
| PRK09982 | 142 | universal stress protein UspD; Provisional | 99.16 | |
| PF00582 | 140 | Usp: Universal stress protein family; InterPro: IP | 99.09 | |
| PRK09560 | 389 | nhaA pH-dependent sodium/proton antiporter; Review | 99.09 | |
| cd01987 | 124 | USP_OKCHK USP domain is located between the N-term | 99.08 | |
| PRK09561 | 388 | nhaA pH-dependent sodium/proton antiporter; Review | 99.04 | |
| PRK14855 | 423 | nhaA pH-dependent sodium/proton antiporter; Provis | 99.04 | |
| PRK14854 | 383 | nhaA pH-dependent sodium/proton antiporter; Provis | 99.0 | |
| PRK10116 | 142 | universal stress protein UspC; Provisional | 98.98 | |
| PRK11175 | 305 | universal stress protein UspE; Provisional | 98.89 | |
| PF06965 | 378 | Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP | 98.84 | |
| cd00293 | 130 | USP_Like Usp: Universal stress protein family. The | 98.77 | |
| cd01989 | 146 | STK_N The N-terminal domain of Eukaryotic Serine T | 98.73 | |
| COG3004 | 390 | NhaA Na+/H+ antiporter [Inorganic ion transport an | 98.73 | |
| KOG1966 | 670 | consensus Sodium/hydrogen exchanger protein [Inorg | 98.65 | |
| PRK09982 | 142 | universal stress protein UspD; Provisional | 98.57 | |
| PRK15005 | 144 | universal stress protein F; Provisional | 98.56 | |
| cd01987 | 124 | USP_OKCHK USP domain is located between the N-term | 98.54 | |
| cd01988 | 132 | Na_H_Antiporter_C The C-terminal domain of a subfa | 98.5 | |
| COG0589 | 154 | UspA Universal stress protein UspA and related nuc | 98.47 | |
| PF00582 | 140 | Usp: Universal stress protein family; InterPro: IP | 98.4 | |
| PRK15118 | 144 | universal stress global response regulator UspA; P | 98.37 | |
| PRK15456 | 142 | universal stress protein UspG; Provisional | 98.34 | |
| PRK10116 | 142 | universal stress protein UspC; Provisional | 98.31 | |
| cd00293 | 130 | USP_Like Usp: Universal stress protein family. The | 98.19 | |
| PF03812 | 314 | KdgT: 2-keto-3-deoxygluconate permease; InterPro: | 97.8 | |
| PRK12460 | 312 | 2-keto-3-deoxygluconate permease; Provisional | 97.77 | |
| PRK12652 | 357 | putative monovalent cation/H+ antiporter subunit E | 97.64 | |
| PF05684 | 378 | DUF819: Protein of unknown function (DUF819); Inte | 97.6 | |
| COG0385 | 319 | Predicted Na+-dependent transporter [General funct | 97.47 | |
| PRK12652 | 357 | putative monovalent cation/H+ antiporter subunit E | 97.41 | |
| COG3180 | 352 | AbrB Putative ammonia monooxygenase [General funct | 97.37 | |
| COG0786 | 404 | GltS Na+/glutamate symporter [Amino acid transport | 97.35 | |
| COG0798 | 342 | ACR3 Arsenite efflux pump ACR3 and related permeas | 97.34 | |
| PF03616 | 368 | Glt_symporter: Sodium/glutamate symporter; InterPr | 97.24 | |
| TIGR00698 | 335 | conserved hypothetical integral membrane protein. | 97.16 | |
| COG0589 | 154 | UspA Universal stress protein UspA and related nuc | 97.02 | |
| TIGR00793 | 314 | kdgT 2-keto-3-deoxygluconate transporter. This fam | 97.02 | |
| PF13593 | 313 | DUF4137: SBF-like CPA transporter family (DUF4137) | 96.81 | |
| TIGR00210 | 398 | gltS sodium--glutamate symport carrier (gltS). | 96.8 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.79 | |
| TIGR00832 | 328 | acr3 arsenical-resistance protein. The first prote | 96.71 | |
| PF03601 | 305 | Cons_hypoth698: Conserved hypothetical protein 698 | 96.7 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.7 | |
| TIGR00841 | 286 | bass bile acid transporter. Functionally character | 96.61 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 96.44 | |
| PF03956 | 191 | DUF340: Membrane protein of unknown function (DUF3 | 96.25 | |
| PRK05274 | 326 | 2-keto-3-deoxygluconate permease; Provisional | 96.08 | |
| PF05145 | 318 | AmoA: Putative ammonia monooxygenase; InterPro: IP | 96.08 | |
| PF03390 | 414 | 2HCT: 2-hydroxycarboxylate transporter family; Int | 96.01 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.87 | |
| PLN03159 | 832 | cation/H(+) antiporter 15; Provisional | 95.69 | |
| PF06826 | 169 | Asp-Al_Ex: Predicted Permease Membrane Region; Int | 95.54 | |
| TIGR00932 | 273 | 2a37 transporter, monovalent cation:proton antipor | 95.53 | |
| PF01758 | 187 | SBF: Sodium Bile acid symporter family; InterPro: | 95.46 | |
| COG0475 | 397 | KefB Kef-type K+ transport systems, membrane compo | 95.36 | |
| TIGR00930 | 953 | 2a30 K-Cl cotransporter. | 95.24 | |
| PRK03818 | 552 | putative transporter; Validated | 95.09 | |
| COG3493 | 438 | CitS Na+/citrate symporter [Energy production and | 94.9 | |
| cd01984 | 86 | AANH_like Adenine nucleotide alpha hydrolases supe | 94.66 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 94.62 | |
| COG2855 | 334 | Predicted membrane protein [Function unknown] | 94.42 | |
| PRK05326 | 562 | potassium/proton antiporter; Reviewed | 94.23 | |
| PF03601 | 305 | Cons_hypoth698: Conserved hypothetical protein 698 | 94.04 | |
| TIGR03802 | 562 | Asp_Ala_antiprt aspartate-alanine antiporter. All | 93.79 | |
| TIGR01625 | 154 | YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati | 93.59 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 93.21 | |
| TIGR03802 | 562 | Asp_Ala_antiprt aspartate-alanine antiporter. All | 93.09 | |
| PRK04972 | 558 | putative transporter; Provisional | 92.41 | |
| TIGR03082 | 156 | Gneg_AbrB_dup membrane protein AbrB duplication. T | 92.22 | |
| COG2855 | 334 | Predicted membrane protein [Function unknown] | 92.15 | |
| TIGR00844 | 810 | c_cpa1 na(+)/h(+) antiporter. This model is specif | 91.66 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 91.55 | |
| TIGR00831 | 525 | a_cpa1 Na+/H+ antiporter, bacterial form. This mod | 90.75 | |
| PRK04972 | 558 | putative transporter; Provisional | 90.54 | |
| PF03977 | 360 | OAD_beta: Na+-transporting oxaloacetate decarboxyl | 90.42 | |
| TIGR00698 | 335 | conserved hypothetical integral membrane protein. | 90.42 | |
| TIGR03082 | 156 | Gneg_AbrB_dup membrane protein AbrB duplication. T | 89.9 | |
| TIGR00783 | 347 | ccs citrate carrier protein, CCS family. These pro | 89.81 | |
| TIGR00210 | 398 | gltS sodium--glutamate symport carrier (gltS). | 89.62 | |
| COG2985 | 544 | Predicted permease [General function prediction on | 89.45 | |
| PRK12460 | 312 | 2-keto-3-deoxygluconate permease; Provisional | 89.42 | |
| TIGR00946 | 321 | 2a69 he Auxin Efflux Carrier (AEC) Family. | 88.65 | |
| COG1346 | 230 | LrgB Putative effector of murein hydrolase [Cell e | 88.01 | |
| PRK03818 | 552 | putative transporter; Validated | 87.95 | |
| PF05145 | 318 | AmoA: Putative ammonia monooxygenase; InterPro: IP | 87.3 | |
| TIGR02432 | 189 | lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t | 85.62 | |
| TIGR00808 | 254 | malonate_madM malonate transporter, MadM subunit. | 85.51 | |
| PF03616 | 368 | Glt_symporter: Sodium/glutamate symporter; InterPr | 85.51 | |
| cd01984 | 86 | AANH_like Adenine nucleotide alpha hydrolases supe | 85.24 | |
| TIGR03136 | 399 | malonate_biotin Na+-transporting malonate decarbox | 85.22 | |
| COG1646 | 240 | Predicted phosphate-binding enzymes, TIM-barrel fo | 84.62 | |
| PF03977 | 360 | OAD_beta: Na+-transporting oxaloacetate decarboxyl | 84.47 | |
| COG0786 | 404 | GltS Na+/glutamate symporter [Amino acid transport | 84.29 | |
| PRK05253 | 301 | sulfate adenylyltransferase subunit 2; Provisional | 84.15 | |
| cd01992 | 185 | PP-ATPase N-terminal domain of predicted ATPase of | 83.33 | |
| PF01171 | 182 | ATP_bind_3: PP-loop family; InterPro: IPR011063 Th | 83.13 | |
| PRK04288 | 232 | antiholin-like protein LrgB; Provisional | 80.46 | |
| TIGR01109 | 354 | Na_pump_decarbB sodium ion-translocating decarboxy | 80.46 |
| >PLN03159 cation/H(+) antiporter 15; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-145 Score=1297.10 Aligned_cols=745 Identities=32% Similarity=0.558 Sum_probs=673.4
Q ss_pred CCccccc-ccccCCCcccCcccccccccCccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhCCChhHHHHhhhceec
Q 035624 8 NGSVSIT-MCINLPPEVNSAGLVMQFEDGVKEYKWLDYTTPRIMLLLATMFTISQVFHSVLKRFGIPIFISQIFVSILTF 86 (775)
Q Consensus 8 ~~~~~~~-~c~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~l~~i~lil~~~~~~~~ll~rl~~P~iv~~IlaGillG 86 (775)
|-+.+.. +|+. +.+.+|+|+|+ |+||++|++|.+++|+++++++++++++++||+|||.++|||++|+++|
T Consensus 10 ~~~~~~~~~c~~-~~~~~s~g~~~-------g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLG 81 (832)
T PLN03159 10 NPSTASSVVCYA-PMMITTNGIWQ-------GDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILG 81 (832)
T ss_pred CCCCCCCccccc-CCCccCCcccc-------cCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcC
Confidence 3344444 5994 43569999999 9999999999999999999999999999999999999999999999999
Q ss_pred cccchhcccccc---ccCc-ccHHHHHHHHHHHHHHHHHHHhcccChHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 035624 87 DDFFLVIKMENK---IITP-EHVQLIGSMGNIGIALFIFQSGVKMDLSMVSKVGRKALYIGILSVISPLVALIPTFMVPT 162 (775)
Q Consensus 87 P~~~~~lg~~~~---~~f~-~~~~~l~~l~~igl~~llF~~Gle~d~~~lk~~~~~~~~i~~~~~l~p~~~~~~~~~~l~ 162 (775)
|++ +|+++. .+|| ++.+.++.++++|++++||++|+|+|++.+|+++|+++.+|+.++++|+++|++++++++
T Consensus 82 Ps~---lg~i~~~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~ 158 (832)
T PLN03159 82 PSV---LGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFH 158 (832)
T ss_pred Hhh---hCcChhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 999754 5788 677789999999999999999999999999999999999999999999999988887664
Q ss_pred CC------hhHHHHHHHHHhhccHHHHHHHHhhccccCChhHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCChhHHHHHH
Q 035624 163 GT------GPSGFFITPLYYVTSFPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATVLLLTVSQVASSSPAQALRTL 236 (775)
Q Consensus 163 ~~------~~~~l~ig~~ls~Ts~~vv~~iL~el~~~~s~~g~l~ls~a~i~D~~~~i~l~~~~~~~~~~~~~~~~l~~~ 236 (775)
.. ...++++|.++|.||+|+++++|+|+|+++++.||+++++++++|+++|++++++.+....+.+....++.+
T Consensus 159 ~~~~~~~~~~~~l~~g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~~~~~~l~~~ 238 (832)
T PLN03159 159 QVSRNVHQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVL 238 (832)
T ss_pred hcccccchhHHHHHHHHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHH
Confidence 32 225789999999999999999999999999999999999999999999999988766544333334456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHhhccCCCCchhHHH
Q 035624 237 GYVVFFIFIVMVVVRPAMLLIVRMTPEGKEVSQTGLYVVILILLLFLSFARKFYSELTVAGLYIVGLAVPRGPPLGSALV 316 (775)
Q Consensus 237 ~~~i~~~~~~~~v~r~~~~~l~~~~~~~~~~~e~~~~~~l~~~l~~~~~a~~~~g~~~~lgaf~aGl~~~~~~~~~~~l~ 316 (775)
+..++|++++.+++||++.|+.||++++++.++.++.++++++++++++++.+ |+|+++|||++|+++|+. |+++.+.
T Consensus 239 l~~~~f~~~~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~-Gl~~ilGAFlaGl~lp~~-~~~~~l~ 316 (832)
T PLN03159 239 LSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAI-GTHSVFGAFVFGLVIPNG-PLGVTLI 316 (832)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHh-CccHHHHHHHHhhccCCc-chHHHHH
Confidence 77788888889999999999999999888888989989999999999999999 999999999999999984 8899999
Q ss_pred HhhhhhhHhhhHHHHHHHHhhcccc--cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhhh
Q 035624 317 NKFDCLVSGFFLPIFVTTSAMRIHD--LRPQSFNIFIVQNILTVAWIVLVKFGTCSLLLLYWKMHKNDAMALALIMNAKG 394 (775)
Q Consensus 317 ~~l~~~~~~~f~PifF~~~G~~id~--l~~~~~~~~~~~~~~~~vv~~~~K~l~~~l~~~~~~~~~~~~~~lg~~l~~rG 394 (775)
+|++++++++|+|+||+++|+++|+ +.+ +..| +.+++++++++++|+++++++++++|+|++|++.+|++|++||
T Consensus 317 ekle~~~~~lflPlFFv~vGl~idl~~l~~--~~~~-~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG 393 (832)
T PLN03159 317 EKLEDFVSGLLLPLFFAISGLKTNVTKIQG--PATW-GLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKG 393 (832)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeHHHhcC--chHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccc
Confidence 9999999999999999999999999 554 4344 4456677788999999999999999999999999999999999
Q ss_pred hHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHhHHHHHHhhcCcccccccccccccccCCCCCceeEEEEeecCCChhh
Q 035624 395 IVEMAFYTFASDGRYVPPNMFRFMLGIIIVMGSIVPIFVRKLYDPSRKYAGYQIKKLVDCKPESELQIVCCIYIPSNISS 474 (775)
Q Consensus 395 ~v~l~~~~~~~~~~ii~~~~~~~lv~~~il~t~i~~~l~~~l~~~~~~~~~~~~r~i~~~~~~~e~rILvcv~~~~~~~~ 474 (775)
++++++++++++.|+++++.|++++++++++|.+.+|+++++|||+|||..|++|++|+.++++|+|||+|+|+++++++
T Consensus 394 ~~~Lii~~ig~~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~ 473 (832)
T PLN03159 394 LVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPT 473 (832)
T ss_pred HHHHHHHHHHHhcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCcEEEEEEeecccCCccchhhhhhhhcccc----cccccchHHHHHHHHccccCCcceEEEEEEEE
Q 035624 475 AINLLSISCPRNECPTVVNALHLIKLSDQATSIFVSHQKKKKNF----SAYSYSENVIVSFKKFGGLRWGAVSINTFTAI 550 (775)
Q Consensus 475 li~l~~~~~~~~~~~~~v~~lhlvel~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~f~~~~~~~~~~v~v~~~~~v 550 (775)
+++|++++++++++|.++|++||+|+++|++|.+++|+.+++.. +...+++++.++|++|++++ ++|+++++|+|
T Consensus 474 li~Lle~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~v 552 (832)
T PLN03159 474 IINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAI 552 (832)
T ss_pred HHHHHHhcCCCCCCCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEE
Confidence 99999999999999999999999999999999999997653321 12345799999999999754 57999999999
Q ss_pred cCCCCcHHHHHHHHhhcCCcEEEEccccccccCCCccccchhhHHHHHHHhccCCCceEEEEcCCCC-cccccccCCCCC
Q 035624 551 SPLDLMHDDICTLALDKLASLVILSFHRTWYIDGSLESDDQSVRNLNLRILEKAPCSVGILIDHGNL-KRSVTHMDSSAD 629 (775)
Q Consensus 551 s~~~~m~~~I~~~a~e~~adlIImg~h~~~~~d~~~~~~~~~~~~~~~kVl~~Apc~Vgilvdr~~~-~~~~~~~~~~~~ 629 (775)
||+++||+|||++|+|+++|+||+||||+|+.||.+++++..+|.+|+||+++|||||||+|||+.. ....+. .+
T Consensus 553 s~~~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~----~~ 628 (832)
T PLN03159 553 SPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLAS----NQ 628 (832)
T ss_pred eCcccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCccccccc----cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999832 111111 44
Q ss_pred ccceEEEEecCCcChHHHHHHHHHHhhCCCeEEEEEEeeecCCCCC--------------------CchhhhhHHHHHHH
Q 035624 630 SFSKVALLFLGGNDDREALTLAKRMGRDNKVRLTVVHFIAASDDGD--------------------VDWETILDSEVLRD 689 (775)
Q Consensus 630 ~~~~i~~~f~gg~ddreAl~~a~rma~~~~~~ltvl~~~~~~~~~~--------------------~~~~~~~d~~~~~~ 689 (775)
..+||+++|+||+||||||+||+|||+||++++||+||++++...+ ++.|+++||++++|
T Consensus 629 ~~~~v~~~F~GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~e 708 (832)
T PLN03159 629 VSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINE 708 (832)
T ss_pred cceeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999987533211 34578899999999
Q ss_pred hhcC----CCeEEEEEeecChhhHHHHHHhcccCCcEEEEcccCCCCCccccccccCCCCCccccchhhhhcCCCCCccc
Q 035624 690 IKKT----ECMRYEKHVVENGADTVEIVHSMVNQYDLIIVGRRHNLECPQTSCLDQWSEFPELGVLGDLLASKDFGNKCS 765 (775)
Q Consensus 690 ~~~~----~~v~y~e~~V~~g~~i~~~i~~~~~~~DLiivG~~~~~~~~~~~gl~~w~e~~eLG~igd~las~d~~~~~s 765 (775)
|+.+ +++.|.|+.|+||+|+++.+|+|.++|||++|||+|+.+||+|+||+||+||||||+|||+|||+||++++|
T Consensus 709 f~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~S 788 (832)
T PLN03159 709 FRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVS 788 (832)
T ss_pred HHHhcCCCCceEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCcee
Confidence 9976 679999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EEEEEeee
Q 035624 766 VLVVQQQR 773 (775)
Q Consensus 766 vlvvqq~~ 773 (775)
|||||||+
T Consensus 789 VLVvQQ~~ 796 (832)
T PLN03159 789 VLVVQQYV 796 (832)
T ss_pred EEEEEeec
Confidence 99999996
|
|
| >KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
| >COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05326 potassium/proton antiporter; Reviewed | Back alignment and domain information |
|---|
| >TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family | Back alignment and domain information |
|---|
| >PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] | Back alignment and domain information |
|---|
| >COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00844 c_cpa1 na(+)/h(+) antiporter | Back alignment and domain information |
|---|
| >TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form | Back alignment and domain information |
|---|
| >COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 | Back alignment and domain information |
|---|
| >PRK11175 universal stress protein UspE; Provisional | Back alignment and domain information |
|---|
| >PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional | Back alignment and domain information |
|---|
| >KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea | Back alignment and domain information |
|---|
| >TIGR00773 NhaA Na+/H+ antiporter NhaA | Back alignment and domain information |
|---|
| >PRK15456 universal stress protein UspG; Provisional | Back alignment and domain information |
|---|
| >PRK15005 universal stress protein F; Provisional | Back alignment and domain information |
|---|
| >PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional | Back alignment and domain information |
|---|
| >cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases | Back alignment and domain information |
|---|
| >PRK15118 universal stress global response regulator UspA; Provisional | Back alignment and domain information |
|---|
| >PRK09982 universal stress protein UspD; Provisional | Back alignment and domain information |
|---|
| >PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents | Back alignment and domain information |
|---|
| >PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed | Back alignment and domain information |
|---|
| >cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family | Back alignment and domain information |
|---|
| >PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed | Back alignment and domain information |
|---|
| >PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional | Back alignment and domain information |
|---|
| >PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional | Back alignment and domain information |
|---|
| >PRK10116 universal stress protein UspC; Provisional | Back alignment and domain information |
|---|
| >PRK11175 universal stress protein UspE; Provisional | Back alignment and domain information |
|---|
| >PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH | Back alignment and domain information |
|---|
| >cd00293 USP_Like Usp: Universal stress protein family | Back alignment and domain information |
|---|
| >cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases | Back alignment and domain information |
|---|
| >COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09982 universal stress protein UspD; Provisional | Back alignment and domain information |
|---|
| >PRK15005 universal stress protein F; Provisional | Back alignment and domain information |
|---|
| >cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family | Back alignment and domain information |
|---|
| >cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea | Back alignment and domain information |
|---|
| >COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents | Back alignment and domain information |
|---|
| >PRK15118 universal stress global response regulator UspA; Provisional | Back alignment and domain information |
|---|
| >PRK15456 universal stress protein UspG; Provisional | Back alignment and domain information |
|---|
| >PRK10116 universal stress protein UspC; Provisional | Back alignment and domain information |
|---|
| >cd00293 USP_Like Usp: Universal stress protein family | Back alignment and domain information |
|---|
| >PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi | Back alignment and domain information |
|---|
| >PRK12460 2-keto-3-deoxygluconate permease; Provisional | Back alignment and domain information |
|---|
| >PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed | Back alignment and domain information |
|---|
| >PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species | Back alignment and domain information |
|---|
| >COG0385 Predicted Na+-dependent transporter [General function prediction only] | Back alignment and domain information |
|---|
| >PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed | Back alignment and domain information |
|---|
| >COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] | Back alignment and domain information |
|---|
| >COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate | Back alignment and domain information |
|---|
| >TIGR00698 conserved hypothetical integral membrane protein | Back alignment and domain information |
|---|
| >COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00793 kdgT 2-keto-3-deoxygluconate transporter | Back alignment and domain information |
|---|
| >PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) | Back alignment and domain information |
|---|
| >TIGR00210 gltS sodium--glutamate symport carrier (gltS) | Back alignment and domain information |
|---|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
| >TIGR00832 acr3 arsenical-resistance protein | Back alignment and domain information |
|---|
| >PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins | Back alignment and domain information |
|---|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
| >TIGR00841 bass bile acid transporter | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments | Back alignment and domain information |
|---|
| >PRK05274 2-keto-3-deoxygluconate permease; Provisional | Back alignment and domain information |
|---|
| >PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase | Back alignment and domain information |
|---|
| >PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom | Back alignment and domain information |
|---|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
| >PLN03159 cation/H(+) antiporter 15; Provisional | Back alignment and domain information |
|---|
| >PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters | Back alignment and domain information |
|---|
| >TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family | Back alignment and domain information |
|---|
| >PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes | Back alignment and domain information |
|---|
| >COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00930 2a30 K-Cl cotransporter | Back alignment and domain information |
|---|
| >PRK03818 putative transporter; Validated | Back alignment and domain information |
|---|
| >COG3493 CitS Na+/citrate symporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >COG2855 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05326 potassium/proton antiporter; Reviewed | Back alignment and domain information |
|---|
| >PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins | Back alignment and domain information |
|---|
| >TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter | Back alignment and domain information |
|---|
| >TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter | Back alignment and domain information |
|---|
| >PRK04972 putative transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication | Back alignment and domain information |
|---|
| >COG2855 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00844 c_cpa1 na(+)/h(+) antiporter | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form | Back alignment and domain information |
|---|
| >PRK04972 putative transporter; Provisional | Back alignment and domain information |
|---|
| >PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >TIGR00698 conserved hypothetical integral membrane protein | Back alignment and domain information |
|---|
| >TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication | Back alignment and domain information |
|---|
| >TIGR00783 ccs citrate carrier protein, CCS family | Back alignment and domain information |
|---|
| >TIGR00210 gltS sodium--glutamate symport carrier (gltS) | Back alignment and domain information |
|---|
| >COG2985 Predicted permease [General function prediction only] | Back alignment and domain information |
|---|
| >PRK12460 2-keto-3-deoxygluconate permease; Provisional | Back alignment and domain information |
|---|
| >TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family | Back alignment and domain information |
|---|
| >COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK03818 putative transporter; Validated | Back alignment and domain information |
|---|
| >PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase | Back alignment and domain information |
|---|
| >TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain | Back alignment and domain information |
|---|
| >TIGR00808 malonate_madM malonate transporter, MadM subunit | Back alignment and domain information |
|---|
| >PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate | Back alignment and domain information |
|---|
| >cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) | Back alignment and domain information |
|---|
| >TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit | Back alignment and domain information |
|---|
| >COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
| >PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05253 sulfate adenylyltransferase subunit 2; Provisional | Back alignment and domain information |
|---|
| >cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] | Back alignment and domain information |
|---|
| >PRK04288 antiholin-like protein LrgB; Provisional | Back alignment and domain information |
|---|
| >TIGR01109 Na_pump_decarbB sodium ion-translocating decarboxylase, beta subunit | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 775 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-09 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 7e-09
Identities = 89/653 (13%), Positives = 191/653 (29%), Gaps = 207/653 (31%)
Query: 205 AIVADF----LSYATVLLLTVSQVAS--SSPAQALRTLGYVVFFIF------IVMVVVRP 252
A V +F + +L+ ++ S T +F+ +V V
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT--LRLFWTLLSKQEEMVQKFVEE 85
Query: 253 AM-----LLIVRMTPEGKEVSQTGLYVVILILLLFLSFARKFYSELTVAGLYIVGLAVPR 307
+ L+ + E ++ S ++ +++ + Y++ V V R
Sbjct: 86 VLRINYKFLMSPIKTEQRQPS--------MMTRMYIEQRDRLYNDNQV----FAKYNVSR 133
Query: 308 GPP---LGSALVNKFDCLVSGFFLPIF---------VTTSAMRIHDLRPQ-SFNIFIVQN 354
P L AL+ L + I V + ++ + F IF
Sbjct: 134 LQPYLKLRQALLE----LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF---- 185
Query: 355 ILTVAWIVLVKFGTCSLLLLYWKMHKNDAMALALIMNAKGIVEMAFYTFASDGRYVPPNM 414
W+ C N + ++ Y + +
Sbjct: 186 -----WL---NLKNC-----------NSPETVLEMLQK------LLYQIDPNWTSRSDHS 220
Query: 415 FRFMLGIIIVMGSIVPIFVRKLYDPSRKYAGYQIKKLVDCKPESELQIVCCIYIPSNISS 474
L I + + + K Y L ++ N+ +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPY------------------ENC-LLVL------LNVQN 255
Query: 475 A--INLLSISCP-----RNECPTVVNALHLIKLSDQATSIFVSHQKKKKNFSAYSYSENV 527
A N ++SC R + V + L + T I + H + +++
Sbjct: 256 AKAWNAFNLSCKILLTTRFK--QVTDFL----SAATTTHISLDHHSM--TLTP-DEVKSL 306
Query: 528 IVSF--KKFGGLRWGAVSINTFTAISPL-DLMHDDICT------LALDKLASLVILSF-- 576
++ + + L ++ N +S + + + D + T + DKL +++ S
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPR-RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 577 -----HRTWYID--------------------GSLESDDQSVRNL--NLRILEKAPC--S 607
+R + ++SD V N ++EK P +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 608 VGI--------------------LIDHGNLKRSVTHMDSSADSFSKVALLFLG----GND 643
+ I ++DH N+ ++ D + +G +
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 644 DREALTLAKRMGRD-----NKVRLTVVHFIAASDDGDVDWETILDSEVLRDIKKTECMRY 698
E +TL + + D K+R + A+ IL+ L+ +K Y
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS--------ILN--TLQQLKF-----Y 530
Query: 699 EKHVVENGADTVEIVHSMVNQYDLIIVGRRHNLECPQTSCLDQWSEFPELGVL 751
+ ++ +N +VN + NL C + + L + + E +
Sbjct: 531 KPYICDNDPK----YERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 775 | |||
| 1zcd_A | 388 | Na(+)/H(+) antiporter 1; membrane protein; 3.45A { | 99.9 | |
| 3mt0_A | 290 | Uncharacterized protein PA1789; structural genomic | 99.83 | |
| 3olq_A | 319 | Universal stress protein E; structural genomics, P | 99.81 | |
| 3loq_A | 294 | Universal stress protein; structural genomics, PSI | 99.79 | |
| 3cis_A | 309 | Uncharacterized protein; alpha/beta hydrolase, ATP | 99.78 | |
| 3ab8_A | 268 | Putative uncharacterized protein TTHA0350; tandem- | 99.75 | |
| 3fdx_A | 143 | Putative filament protein / universal stress PROT; | 99.29 | |
| 3s3t_A | 146 | Nucleotide-binding protein, universal stress PROT | 99.24 | |
| 1mjh_A | 162 | Protein (ATP-binding domain of protein MJ0577); hy | 99.22 | |
| 3dlo_A | 155 | Universal stress protein; unknown function, struct | 99.21 | |
| 3hgm_A | 147 | Universal stress protein TEAD; rossman fold, signa | 99.2 | |
| 3tnj_A | 150 | Universal stress protein (USP); structural genomic | 99.17 | |
| 2dum_A | 170 | Hypothetical protein PH0823; conserved hypothetica | 99.17 | |
| 1tq8_A | 163 | Hypothetical protein RV1636; MTCY01B2.28, structur | 99.15 | |
| 2gm3_A | 175 | Unknown protein; AT3G01520, putative ethylene-resp | 99.15 | |
| 2z08_A | 137 | Universal stress protein family; uncharacterized c | 99.15 | |
| 3fg9_A | 156 | Protein of universal stress protein USPA family; A | 99.11 | |
| 3idf_A | 138 | USP-like protein; universal, stress, PSI, MCSG, st | 99.05 | |
| 1jmv_A | 141 | USPA, universal stress protein A; chaperone; 1.85A | 99.0 | |
| 1q77_A | 138 | Hypothetical protein AQ_178; structural genomics, | 98.89 | |
| 3mt0_A | 290 | Uncharacterized protein PA1789; structural genomic | 98.77 | |
| 3olq_A | 319 | Universal stress protein E; structural genomics, P | 98.7 | |
| 3loq_A | 294 | Universal stress protein; structural genomics, PSI | 98.69 | |
| 3s3t_A | 146 | Nucleotide-binding protein, universal stress PROT | 98.68 | |
| 3hgm_A | 147 | Universal stress protein TEAD; rossman fold, signa | 98.55 | |
| 3fdx_A | 143 | Putative filament protein / universal stress PROT; | 98.55 | |
| 1mjh_A | 162 | Protein (ATP-binding domain of protein MJ0577); hy | 98.53 | |
| 2z08_A | 137 | Universal stress protein family; uncharacterized c | 98.51 | |
| 3cis_A | 309 | Uncharacterized protein; alpha/beta hydrolase, ATP | 98.51 | |
| 3idf_A | 138 | USP-like protein; universal, stress, PSI, MCSG, st | 98.51 | |
| 1tq8_A | 163 | Hypothetical protein RV1636; MTCY01B2.28, structur | 98.5 | |
| 3dlo_A | 155 | Universal stress protein; unknown function, struct | 98.5 | |
| 3tnj_A | 150 | Universal stress protein (USP); structural genomic | 98.5 | |
| 2dum_A | 170 | Hypothetical protein PH0823; conserved hypothetica | 98.49 | |
| 1jmv_A | 141 | USPA, universal stress protein A; chaperone; 1.85A | 98.46 | |
| 3fg9_A | 156 | Protein of universal stress protein USPA family; A | 98.42 | |
| 2gm3_A | 175 | Unknown protein; AT3G01520, putative ethylene-resp | 98.24 | |
| 3ab8_A | 268 | Putative uncharacterized protein TTHA0350; tandem- | 98.14 | |
| 1q77_A | 138 | Hypothetical protein AQ_178; structural genomics, | 98.06 | |
| 3zux_A | 332 | Transporter, ASBTNM; transport protein, membrane p | 97.74 | |
| 3g40_A | 294 | Na-K-CL cotransporter; alpha/beta fold 10-stranded | 95.04 |
| >1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=228.11 Aligned_cols=300 Identities=15% Similarity=0.134 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHHHhcccChHHH----Hhhhh--hHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHhhccHH
Q 035624 108 IGSMGNIGIALFIFQSGVKMDLSMV----SKVGR--KALYIGILSVISPLVALIPTFMVPTGTGPSGFFITPLYYVTSFP 181 (775)
Q Consensus 108 l~~l~~igl~~llF~~Gle~d~~~l----k~~~~--~~~~i~~~~~l~p~~~~~~~~~~l~~~~~~~l~ig~~ls~Ts~~ 181 (775)
...+.+-.+.+++|.+|+|+|.+.+ ++..| .....++.|+++|++++ ..++...+.+.....+...|+.+
T Consensus 60 ~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy----~~~~~~~~~~~~gw~ip~ATdIA 135 (388)
T 1zcd_A 60 LLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLY----LAFNYADPITREGWAIPAATDIA 135 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHH----GGGCCSSTTHHHHTSSSSCCCHH
T ss_pred HHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHH----HHHhcCChhhhhhhHHHHHHHHH
Confidence 4456667788999999999999977 55554 37888999999999873 34555555566777777889999
Q ss_pred HHHHHHhhccc-cCChhHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035624 182 VIFCLLTHLKI-LNSELGRLAQSSAIVADFLSYATVLLLTVSQVASSSPAQALRTLGYVVFFIFIVMVVVRPAMLLIVRM 260 (775)
Q Consensus 182 vv~~iL~el~~-~~s~~g~l~ls~a~i~D~~~~i~l~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~v~r~~~~~l~~~ 260 (775)
....++..++. .++..++.+++.|++||+.+|++++++.. ++.+.. .+...+++++.. +..+|
T Consensus 136 fal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~~~~~~----~l~~~~~~~~~~---------~~l~r 199 (388)
T 1zcd_A 136 FALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---NDLSMA----SLGVAAVAIAVL---------AVLNL 199 (388)
T ss_dssp HHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---CCCCHH----HHHHHHHHHHHH---------HHHHH
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---CCccHH----HHHHHHHHHHHH---------HHHHH
Confidence 99999999865 45567799999999999999999988863 222211 111122121111 11222
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHhhccCCC----CchhHHHHhhhhhhHhhhHHHH-HHHH
Q 035624 261 TPEGKEVSQTGLYVVILILLLFLSFARKFYSELTVAGLYIVGLAVPRGP----PLGSALVNKFDCLVSGFFLPIF-VTTS 335 (775)
Q Consensus 261 ~~~~~~~~e~~~~~~l~~~l~~~~~a~~~~g~~~~lgaf~aGl~~~~~~----~~~~~l~~~l~~~~~~~f~Pif-F~~~ 335 (775)
.. +++...++.+ .+ .+.+.++.. |+|+.+|+|++|+++|..+ +..+++++++++++..+++|+| |+..
T Consensus 200 ~~----v~~~~~y~~l-gl-~~w~~~~~s-GvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlFaFana 272 (388)
T 1zcd_A 200 CG----ARRTGVYILV-GV-VLWTAVLKS-GVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANA 272 (388)
T ss_dssp TT----CCCTHHHHHH-HH-HHHHHTTTS-HHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHHHHHHC
T ss_pred hc----chhHHHHHHH-HH-HHHHHHHHh-CccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 1223333333 22 445666889 9999999999999999863 3468899999999989999999 9999
Q ss_pred hhcccc--cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHHhhhhhHHHHHHhh
Q 035624 336 AMRIHD--LRPQSFNIFIVQNILTVAWIVLVKFGTCSLLLLYW----------KMHKNDAMALALIMNAKGIVEMAFYTF 403 (775)
Q Consensus 336 G~~id~--l~~~~~~~~~~~~~~~~vv~~~~K~l~~~l~~~~~----------~~~~~~~~~lg~~l~~rG~v~l~~~~~ 403 (775)
|+++|. ... ... .....+++..+++|++|++..++.. |++|+|...+|++++.+++++++++++
T Consensus 273 Gv~l~~~~~~~--l~~--~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia~l 348 (388)
T 1zcd_A 273 GVSLQGVTLDG--LTS--ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASL 348 (388)
T ss_dssp CCCCSSSCCCT--HHH--HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHH
T ss_pred Ceeecccchhh--ccC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHHHH
Confidence 999997 232 111 1123444555889999966666665 999999999999999999999999999
Q ss_pred hccCCC--CChhhHHHHHHHHHHHHHhHHHHHHhhcC
Q 035624 404 ASDGRY--VPPNMFRFMLGIIIVMGSIVPIFVRKLYD 438 (775)
Q Consensus 404 ~~~~~i--i~~~~~~~lv~~~il~t~i~~~l~~~l~~ 438 (775)
+++.+. +.++.+..+++++++++++++.+.|+.++
T Consensus 349 af~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~~ 385 (388)
T 1zcd_A 349 AFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLR 385 (388)
T ss_dssp HSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC-
T ss_pred hccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 998876 35677999999999999999988876654
|
| >3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} | Back alignment and structure |
|---|
| >3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* | Back alignment and structure |
|---|
| >3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* | Back alignment and structure |
|---|
| >3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* | Back alignment and structure |
|---|
| >3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 | Back alignment and structure |
|---|
| >1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* | Back alignment and structure |
|---|
| >3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 | Back alignment and structure |
|---|
| >3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* | Back alignment and structure |
|---|
| >2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A | Back alignment and structure |
|---|
| >3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} | Back alignment and structure |
|---|
| >1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} | Back alignment and structure |
|---|
| >3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 | Back alignment and structure |
|---|
| >3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 | Back alignment and structure |
|---|
| >3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* | Back alignment and structure |
|---|
| >1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A | Back alignment and structure |
|---|
| >3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* | Back alignment and structure |
|---|
| >3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} | Back alignment and structure |
|---|
| >1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* | Back alignment and structure |
|---|
| >3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* | Back alignment and structure |
|---|
| >2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* | Back alignment and structure |
|---|
| >1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 | Back alignment and structure |
|---|
| >3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* | Back alignment and structure |
|---|
| >3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 775 | |||
| d1mjha_ | 160 | "Hypothetical" protein MJ0577 {Archaeon Methanococ | 99.36 | |
| d2z3va1 | 135 | Hypothetical protein TTHA0895 {Thermus thermophilu | 99.34 | |
| d1jmva_ | 140 | Universal stress protein A, UspA {Haemophilus infl | 99.2 | |
| d1tq8a_ | 147 | Hypothetical protein Rv1636 {Mycobacterium tubercu | 99.12 | |
| d2gm3a1 | 171 | Putative ethylene-responsive protein AT3g01520/F4P | 99.1 | |
| d1q77a_ | 138 | Hypothetical protein Aq_178 {Aquifex aeolicus [Tax | 99.02 | |
| d2z3va1 | 135 | Hypothetical protein TTHA0895 {Thermus thermophilu | 98.74 | |
| d1mjha_ | 160 | "Hypothetical" protein MJ0577 {Archaeon Methanococ | 98.73 | |
| d1jmva_ | 140 | Universal stress protein A, UspA {Haemophilus infl | 98.51 | |
| d1tq8a_ | 147 | Hypothetical protein Rv1636 {Mycobacterium tubercu | 98.29 | |
| d1q77a_ | 138 | Hypothetical protein Aq_178 {Aquifex aeolicus [Tax | 98.28 | |
| d2gm3a1 | 171 | Putative ethylene-responsive protein AT3g01520/F4P | 97.63 |
| >d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: "Hypothetical" protein MJ0577 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.36 E-value=9e-13 Score=124.45 Aligned_cols=144 Identities=13% Similarity=0.112 Sum_probs=98.7
Q ss_pred eEEEEeecCCChhhHHHHHHhhCCCCCCCcEEEEEEeecccCCccchhhhhhh---h-ccccc------ccccchHHHHH
Q 035624 461 QIVCCIYIPSNISSAINLLSISCPRNECPTVVNALHLIKLSDQATSIFVSHQK---K-KKNFS------AYSYSENVIVS 530 (775)
Q Consensus 461 rILvcv~~~~~~~~li~l~~~~~~~~~~~~~v~~lhlvel~~~~~~~~~~~~~---~-~~~~~------~~~~~~~i~~~ 530 (775)
|||+|+|.++....+++.+..++ +..+.+++++|+++.............. . ....+ .....++..+.
T Consensus 5 ~ILvavD~s~~s~~al~~a~~la--~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (160)
T d1mjha_ 5 KILYPTDFSETAEIALKHVKAFK--TLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK 82 (160)
T ss_dssp EEEEECCSCHHHHHHHHHHHHTC--CSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHH--HhcCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999998 6667899999999876532211100000 0 00000 00111222233
Q ss_pred HHHccccC-CcceEEEEEEEEcCCCCcHHHHHHHHhhcCCcEEEEccccccccCCCccccchhhHHHHHHHhccCCCceE
Q 035624 531 FKKFGGLR-WGAVSINTFTAISPLDLMHDDICTLALDKLASLVILSFHRTWYIDGSLESDDQSVRNLNLRILEKAPCSVG 609 (775)
Q Consensus 531 f~~~~~~~-~~~v~v~~~~~vs~~~~m~~~I~~~a~e~~adlIImg~h~~~~~d~~~~~~~~~~~~~~~kVl~~Apc~Vg 609 (775)
++++.+.. ..++.+++.+. .++..+.||+.|++.++|+||||.|++.+..+.+ +|++.++|++++||||.
T Consensus 83 l~~~~~~~~~~gv~~~~~~~---~G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~------~GS~a~~vl~~s~~pVl 153 (160)
T d1mjha_ 83 MENIKKELEDVGFKVKDIIV---VGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEIL------LGSVTENVIKKSNKPVL 153 (160)
T ss_dssp HHHHHHHHHHTTCEEEEEEE---EECHHHHHHHHHHHTTCSEEEEESCCSSCCTTCS------SCHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHhcCCeEEEEEE---eccHHHHHhhhhhccccceEEeccCCCCcccccc------cCcHHHHHHhcCCCCEE
Confidence 33332221 14577777555 3689999999999999999999999988777665 78899999999999999
Q ss_pred EEEcCC
Q 035624 610 ILIDHG 615 (775)
Q Consensus 610 ilvdr~ 615 (775)
|++.+.
T Consensus 154 vV~~~~ 159 (160)
T d1mjha_ 154 VVKRKN 159 (160)
T ss_dssp EECCCC
T ss_pred EEcCCC
Confidence 987654
|
| >d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|