Citrus Sinensis ID: 035682


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
MASSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAGDNWSLW
ccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccccHHHHHHHHHHccccEEEcccccHHHHHHHHccccEEEEEcccccHHHHHccHHHHHHHHHHccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHcccccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEccccEEEcccccccccEEEcccccccEEccccccEEEcHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccEEcccccccEEEEEEccccccccccccccccccEEEEcccHHHHHHccccccc
cccHHHHHHHHHHHHHHHHHcHHHHcHcEEEccHccccccHHHccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHccccEEEEEcccHHHHHHHccHHHHHHHHHHHcHHcccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccEEEEcccccccccEEEEcccccEEEcccccccEEccHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccccccccEccccccEEEEEcccccccccccccccccccccccccccEEEEEcccccc
MASSSSLAFALLIVLSLLhstsssrpligvtyappilaptianphpppppppdrvASIVTslnipavrlpnsdpslIRAFAYTNTTILlsipnafvptlAANRTLAQRWLYRHvlpfyprskislisvgndifdttpdlspfllpaVRNVHLALHDlgikkipvsttfsffniittsfppssaqfqepagslimkpllqfledtnssflvnvypynmyrlnceiplgfalfenypfnfrddlitgvrytNLFDVMVDAVISAMAVaghenipvivaetgwpssgadasevdatPALAEMYLKGLVAHLKsgmgsplrreGVAEAYVYELVDIEVkgerswgilhqNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLcagdnwslw
MASSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPavrlpnsdPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCagdnwslw
MasssslafallivlsllhstsssrplIGVTYAPPILAPTIANphpppppppDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVsttfsffniittsfPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAGDNWSLW
******LAFALLIVLSLLHSTSSSRPLIGVTYAPPILA*******************IVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFP*********AGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPS*******VDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAGDNWS**
******L*FALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVA*************GVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFS*************LLRFFLIGFLMNLLCAGDNWSLW
MASSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAGDNWSLW
**SSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSR*******************GFLMNLLCAGDNWSLW
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SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAGDNWSLW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query392 2.2.26 [Sep-21-2011]
Q9M069 504 Glucan endo-1,3-beta-gluc no no 0.864 0.672 0.4 3e-50
Q9C7U5 505 Glucan endo-1,3-beta-gluc no no 0.785 0.609 0.382 3e-48
Q9ZU91 501 Glucan endo-1,3-beta-gluc no no 0.788 0.616 0.357 2e-44
Q8VYE5 534 Glucan endo-1,3-beta-gluc no no 0.770 0.565 0.332 1e-43
Q9ZQG9392 Glucan endo-1,3-beta-gluc no no 0.839 0.839 0.315 2e-43
Q9FJU9 506 Glucan endo-1,3-beta-gluc no no 0.772 0.598 0.312 7e-43
O65399 511 Glucan endo-1,3-beta-gluc no no 0.765 0.587 0.347 1e-42
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.739 0.630 0.366 4e-42
Q8L868426 Glucan endo-1,3-beta-gluc no no 0.770 0.708 0.339 2e-40
Q06915478 Probable glucan endo-1,3- no no 0.772 0.633 0.323 2e-40
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function desciption
 Score =  199 bits (506), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/365 (40%), Positives = 208/365 (56%), Gaps = 26/365 (7%)

Query: 1   MASSSSLAFALLIVLSLLHSTSSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVT 60
           MA S S+ F LLI LS   S S + P IGV Y    +A  +        PPP     ++ 
Sbjct: 1   MALSISIYF-LLIFLSHFPS-SHAEPFIGVNYGQ--VADNL--------PPPSETVKLLQ 48

Query: 61  SLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPR 120
           S +I  VRL  +DP++I+A A T   I++   N  VP+LA++   A +W+  +VLPFYP 
Sbjct: 49  STSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPA 108

Query: 121 SKISLISVGNDIF-DTTPDLSPFLLPAVRNVHLALHDLGI-KKIPVSTTFSFFNIITTSF 178
           SKI LI+VGN+I     P+L   LLPA++NV  AL  + +  KI VST  S   ++ +S 
Sbjct: 109 SKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNS-MTVLGSSD 167

Query: 179 PPSSAQFQEPAG-SLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCE-IPLGFALFENYPF 236
           PPSS  F   AG    +K +LQFL DT S F +N YP+  Y+ +     L F LFE  P 
Sbjct: 168 PPSSGSFA--AGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFE--PN 223

Query: 237 NFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPAL 296
             R D  TG++YTN+FD  VDAV SA+   G E + ++VAETGW S G DA+EV A+   
Sbjct: 224 AGRVDSKTGIKYTNMFDAQVDAVHSALKSMGFEKVEIVVAETGWASRG-DANEVGASVDN 282

Query: 297 AEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVK----GERSWGILHQNFTQKYE 352
           A+ Y   L+AHL+S +G+PL      + Y++ L D  +K     ER++G+   + +  Y+
Sbjct: 283 AKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYD 342

Query: 353 IEFSR 357
           +  ++
Sbjct: 343 VGLAK 347





Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|Q8L868|E1311_ARATH Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1 Back     alignment and function description
>sp|Q06915|EA6_ARATH Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
225449222384 PREDICTED: glucan endo-1,3-beta-glucosid 0.885 0.903 0.622 1e-128
224112597392 predicted protein [Populus trichocarpa] 0.826 0.826 0.676 1e-127
15228190429 glycosyl hydrolase family 17 protein [Ar 0.882 0.806 0.619 1e-127
297816902407 glycosyl hydrolase family 17 protein [Ar 0.892 0.859 0.620 1e-126
255579128400 Glucan endo-1,3-beta-glucosidase precurs 0.903 0.885 0.612 1e-126
449521687382 PREDICTED: probable glucan endo-1,3-beta 0.811 0.832 0.615 1e-114
449465049382 PREDICTED: probable glucan endo-1,3-beta 0.811 0.832 0.612 1e-114
147842438323 hypothetical protein VITISV_033608 [Viti 0.719 0.873 0.672 1e-110
356499147359 PREDICTED: probable glucan endo-1,3-beta 0.836 0.913 0.565 1e-103
48209914405 Glycosyl hydrolases family 17 protein [S 0.829 0.802 0.531 1e-102
>gi|225449222|ref|XP_002276218.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera] gi|296086103|emb|CBI31544.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/366 (62%), Positives = 283/366 (77%), Gaps = 19/366 (5%)

Query: 22  SSSRPLIGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFA 81
           +SS P++G+TY       T    H     PP  VAS V SL + AVRLP SDPS++R F+
Sbjct: 26  TSSLPVVGITY-------THDPRHDHDHTPPSHVASTVHSLKLSAVRLPESDPSVVRDFS 78

Query: 82  YTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSP 141
           Y+N ++LL+IPN+ +P +A+NR+ A RWLY HV+PFYPRSK+S ISVGNDI DT+ DL+ 
Sbjct: 79  YSNISLLLNIPNSLIPAIASNRSNALRWLYHHVIPFYPRSKVSTISVGNDILDTSSDLAD 138

Query: 142 FLLPAVRNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFL 201
           FLLPA+RNVHL L DLGI+KI VSTTFSF NI+TTSFPPS+A+FQEP   L++KPLLQFL
Sbjct: 139 FLLPAIRNVHLGLRDLGIQKISVSTTFSFINIMTTSFPPSAAEFQEPVSELLIKPLLQFL 198

Query: 202 EDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVIS 261
           +DTNSSFLVN+YPYN+YRLN EIP+GFALF+ +PFN+RDDL TGVRY NLFD+MVD+VIS
Sbjct: 199 DDTNSSFLVNLYPYNVYRLNSEIPIGFALFQQHPFNYRDDLTTGVRYRNLFDMMVDSVIS 258

Query: 262 AMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGV 321
           AMAVAGHE+IPVIV ETGWPSSG DASE+DA+PA AEMY+ GLV HL SG+G+PLRREGV
Sbjct: 259 AMAVAGHESIPVIVTETGWPSSG-DASEIDASPAYAEMYINGLVTHLSSGLGTPLRREGV 317

Query: 322 AEAYVYELVDIEVK----GERSWGILHQNFTQKYEIEFSRACK-------IESVGGFRAL 370
           AE Y+YEL D E +      R WGI++ N T+KY I FS + +       +  VGG   +
Sbjct: 318 AETYIYELFDRETRQGTDSGRHWGIMYPNMTRKYNIPFSGSVRTGYSRGWVRMVGGLFTI 377

Query: 371 LRFFLI 376
           +  +L+
Sbjct: 378 VALWLL 383




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112597|ref|XP_002316237.1| predicted protein [Populus trichocarpa] gi|222865277|gb|EEF02408.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15228190|ref|NP_191137.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] gi|7263566|emb|CAB81603.1| beta-1, 3-glucanase-like protein [Arabidopsis thaliana] gi|332645920|gb|AEE79441.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297816902|ref|XP_002876334.1| glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] gi|297322172|gb|EFH52593.1| glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255579128|ref|XP_002530412.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223530061|gb|EEF31982.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449521687|ref|XP_004167861.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449465049|ref|XP_004150241.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147842438|emb|CAN71832.1| hypothetical protein VITISV_033608 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356499147|ref|XP_003518404.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Glycine max] Back     alignment and taxonomy information
>gi|48209914|gb|AAT40508.1| Glycosyl hydrolases family 17 protein [Solanum demissum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2079011429 AT3G55780 [Arabidopsis thalian 0.882 0.806 0.588 3.8e-110
TAIR|locus:2205298 505 AT1G66250 [Arabidopsis thalian 0.770 0.598 0.363 2.6e-47
TAIR|locus:2139519 504 AT4G34480 [Arabidopsis thalian 0.752 0.585 0.391 4.2e-47
TAIR|locus:2076735375 AT3G61810 [Arabidopsis thalian 0.75 0.784 0.383 3e-46
TAIR|locus:2118339 534 AT4G29360 [Arabidopsis thalian 0.762 0.559 0.332 1.3e-45
TAIR|locus:2165432438 AT5G42720 [Arabidopsis thalian 0.755 0.675 0.385 4.4e-45
TAIR|locus:2098585460 AT3G07320 [Arabidopsis thalian 0.755 0.643 0.355 9.1e-45
TAIR|locus:2042604 503 AT2G16230 [Arabidopsis thalian 0.762 0.594 0.366 1.5e-44
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.767 0.661 0.303 1.5e-44
TAIR|locus:2141867397 AT4G18340 [Arabidopsis thalian 0.762 0.753 0.348 1.7e-43
TAIR|locus:2079011 AT3G55780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
 Identities = 212/360 (58%), Positives = 268/360 (74%)

Query:    28 IGVTYAPPILAPTIANXXXXXXXXXDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTI 87
             IGVTY+ P      A+         DR+A  V S+NIPAVRL +S+P++IRAFAYTN ++
Sbjct:    31 IGVTYSTP------ASISGTVQLSPDRIAEKVVSMNIPAVRLLDSNPAMIRAFAYTNVSL 84

Query:    88 LLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAV 147
              LS+PN  VP LA+NR+LA RW+YRHVLPFYPR+KIS+ISVGND+   +PD+SPFLL A+
Sbjct:    85 FLSVPNPLVPLLASNRSLAMRWVYRHVLPFYPRTKISIISVGNDVISYSPDVSPFLLRAM 144

Query:   148 RNVHLALHDLGIKKIPVXXXXXXXXXXXXXXPPSSAQFQEPAGSLIMKPLLQFLEDTNSS 207
             +NVHL+L DL I KI V              PPSSAQFQ+P G +I++P+LQFLE TNSS
Sbjct:   145 QNVHLSLVDLRIYKISVSTTFSFFNIVPTAFPPSSAQFQQPNGEVIIRPILQFLERTNSS 204

Query:   208 FLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAG 267
             FL+N+YPYNMYR +  IP+GFALFE +PFNFRDDL TGVRY NLFD+MVDAVIS+MAV G
Sbjct:   205 FLINLYPYNMYRSSFSIPIGFALFEEFPFNFRDDLTTGVRYRNLFDMMVDAVISSMAVMG 264

Query:   268 HENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVY 327
             HEN+PVIVAETGWPSSG DASEVDAT   +EM+LK L+ HL+SG G+PLR+EGV+E Y++
Sbjct:   265 HENLPVIVAETGWPSSGIDASEVDATLLYSEMFLKALLTHLRSGCGTPLRKEGVSEVYIF 324

Query:   328 ELVDIEVK-GERSWGILHQNFTQKYEIEFSRACKIESVGGFRALLRFFLIGFLMNLLCAG 386
             ELV+ + K G R+WG+LH N T KY  +FS   K+     F+ +L    +GF + ++  G
Sbjct:   325 ELVEKDAKQGIRNWGLLHHNMTSKYSFDFSDGGKVRR---FKEIL----VGFFVQVVMIG 377




GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2205298 AT1G66250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076735 AT3G61810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165432 AT5G42720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098585 AT3G07320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042604 AT2G16230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141867 AT4G18340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.824
3rd Layer3.2.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00018295001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (868 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 6e-66
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 3e-05
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information
 Score =  211 bits (540), Expect = 6e-66
 Identities = 114/312 (36%), Positives = 168/312 (53%), Gaps = 20/312 (6%)

Query: 50  PPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRW 109
           P P  V S+  S NI  +R+ + D   ++A   +   ++L +PN  +  LA +++ A  W
Sbjct: 13  PSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLAELAGSQSNAASW 72

Query: 110 LYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGI-KKIPVSTTF 168
           +  +V P+ P+ KI  I+VGN++   T     FL+PA+RN+  AL   G+  KI VST+ 
Sbjct: 73  VQDNVRPYAPKVKIRYIAVGNEVSPGT--TQSFLVPAMRNIRNALTAAGLGNKIKVSTSV 130

Query: 169 SFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLN-CEIPLG 227
             F+I+  SFPPS   F+    S  M P++ FL  TN+  L NVYPY  Y  N  +I L 
Sbjct: 131 R-FDILGNSFPPSYGSFRVETRS-FMDPIIVFLAGTNAPLLANVYPYFAYSNNPRDISLN 188

Query: 228 FALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADA 287
           +ALF+            G+ Y NLFD MVDAV +A+  AG  ++ V+V+E+GWPS G  A
Sbjct: 189 YALFQPGTTVVDG----GLGYQNLFDAMVDAVYAALEKAGGPSVEVVVSESGWPSDGGFA 244

Query: 288 SEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKG----ERSWGIL 343
               AT   A  Y + L+ H+K   G+P R     E YV+ + D   K     E+ +G+ 
Sbjct: 245 ----ATIENARTYNQNLINHVKK--GTPKRPGWAIETYVFAMFDENQKPGESVEKHFGLF 298

Query: 344 HQNFTQKYEIEF 355
           + N   KY I+F
Sbjct: 299 YPNKQPKYPIDF 310


Length = 310

>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.89
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.77
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 97.99
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.92
PRK10150604 beta-D-glucuronidase; Provisional 97.91
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.4
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 96.79
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 95.51
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 85.16
PRK09936296 hypothetical protein; Provisional 82.92
TIGR03356427 BGL beta-galactosidase. 82.71
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 80.76
PF03662319 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t 80.19
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
Probab=100.00  E-value=4.7e-84  Score=637.13  Aligned_cols=304  Identities=42%  Similarity=0.761  Sum_probs=247.8

Q ss_pred             eeEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHcCCCCeEEeecCChHHHHHHhcCCceEEEcCCCCChhhHhhhHHHHH
Q 035682           28 IGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQ  107 (392)
Q Consensus        28 ~GvnYg~py~~~~~~~~~~~nlps~~~v~~llks~~i~~VRlY~~d~~vL~A~~~tgikV~lGV~n~~l~~la~~~~~A~  107 (392)
                      ||||||          +.|+|+|+|.++++++|+++|++||||++|+++|+|++++||+|++||+|++++.+++++..|.
T Consensus         1 iGvnyG----------~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~   70 (310)
T PF00332_consen    1 IGVNYG----------RVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAG   70 (310)
T ss_dssp             EEEEE-------------SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHH
T ss_pred             CeEecc----------CccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHh
Confidence            799999          8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccccCCCCcEEEEEecccccCCCCCChhHHHHHHHHHHHHHHhcCCC-ceeeecccccceeecccCCCCCCccc
Q 035682          108 RWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIK-KIPVSTTFSFFNIITTSFPPSSAQFQ  186 (392)
Q Consensus       108 ~Wv~~nI~~~~p~~~I~~I~VGNEvL~~~~~~~~~Lv~am~nvr~aL~~~Gl~-~I~VsT~~s~~~vl~~s~pPS~g~f~  186 (392)
                      .|+++||.+|+|.++|++|+||||++......  .|+|+|+++|++|+++||+ +|||+|+++ ++++.++||||+|.|+
T Consensus        71 ~Wv~~nv~~~~~~~~i~~i~VGnEv~~~~~~~--~lvpAm~ni~~aL~~~~L~~~IkVst~~~-~~vl~~s~PPS~g~F~  147 (310)
T PF00332_consen   71 SWVRTNVLPYLPAVNIRYIAVGNEVLTGTDNA--YLVPAMQNIHNALTAAGLSDQIKVSTPHS-MDVLSNSFPPSAGVFR  147 (310)
T ss_dssp             HHHHHHTCTCTTTSEEEEEEEEES-TCCSGGG--GHHHHHHHHHHHHHHTT-TTTSEEEEEEE-GGGEEE-SSGGG-EES
T ss_pred             hhhhhcccccCcccceeeeecccccccCccce--eeccHHHHHHHHHHhcCcCCcceeccccc-cccccccCCCccCccc
Confidence            99999999999999999999999999874333  8999999999999999998 699999999 9999999999999999


Q ss_pred             ccchhhhhHHHHHHHhhcCCcceeeccCCcccccC-CCCCccccccccCCCccccCCCCCcccchhHHHHHHHHHHHHHH
Q 035682          187 EPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLN-CEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAV  265 (392)
Q Consensus       187 ~~~~~~~~~~~ldFL~~~~s~~~vNiyPyf~~~~~-~~i~l~yA~f~~~~~~~~dd~~~~~~Y~nlfda~vdav~~a~~~  265 (392)
                      +++.+.| +++++||..++||||+|+||||++..+ ..++|+||+|+++...+ |   ++.+|+||||+|+|++++||++
T Consensus       148 ~~~~~~~-~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~-D---~~~~y~nlfDa~~da~~~a~~~  222 (310)
T PF00332_consen  148 SDIASVM-DPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV-D---GGLAYTNLFDAMVDAVYAAMEK  222 (310)
T ss_dssp             HHHHHHH-HHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE-E---TTEEESSHHHHHHHHHHHHHHT
T ss_pred             ccchhhh-hHHHHHhhccCCCceeccchhhhccCCcccCCccccccccccccc-c---cchhhhHHHHHHHHHHHHHHHH
Confidence            9988777 999999999999999999999999988 89999999999876544 4   4888999999999999999999


Q ss_pred             hCCCCccEEEeeeccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCccccEEEEEeeCCCCC-C---CcceE
Q 035682          266 AGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVK-G---ERSWG  341 (392)
Q Consensus       266 ~g~~~~~VvVtETGWPS~G~~~~~~~aS~~na~~y~~~li~~~~~~~Gtp~rp~~~~~~y~Fe~FDe~wK-G---E~~wG  341 (392)
                      +|+++++|+||||||||+|+    ..|+++||++|++++++++.  .|||+||+.++++||||+|||+|| |   |||||
T Consensus       223 ~g~~~~~vvv~ETGWPs~G~----~~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wG  296 (310)
T PF00332_consen  223 LGFPNVPVVVGETGWPSAGD----PGATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWG  296 (310)
T ss_dssp             TT-TT--EEEEEE---SSSS----TTCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--
T ss_pred             hCCCCceeEEeccccccCCC----CCCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceee
Confidence            99999999999999999996    57899999999999999996  799999999999999999999999 4   99999


Q ss_pred             eeecCCceeEEEee
Q 035682          342 ILHQNFTQKYEIEF  355 (392)
Q Consensus       342 lf~~d~~~ky~l~~  355 (392)
                      ||++||+|||+|+|
T Consensus       297 lf~~d~~~ky~~~f  310 (310)
T PF00332_consen  297 LFYPDGTPKYDLDF  310 (310)
T ss_dssp             SB-TTSSBSS----
T ss_pred             eECCCCCeecCCCC
Confidence            99999999999987



2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.

>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK09936 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 1e-35
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 5e-32
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 6e-32
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 2e-30
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 4e-29
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 3e-28
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure

Iteration: 1

Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 166/307 (54%), Gaps = 14/307 (4%) Query: 53 DRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYR 112 V S+ S NI +RL + + + ++A +N +LL +P + V +LA+N + A W+ R Sbjct: 16 SEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRR 75 Query: 113 HVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIKKIPVXXXXXXXX 172 +V+ ++P I+VGN++ + DL+ ++LPA+RN++ AL G++ Sbjct: 76 NVVAYWPSVSFRYIAVGNELIPGS-DLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTG 134 Query: 173 XXXXXXPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLN-CEIPLGFALF 231 PPS+ F A + P++QFL + LVNVYPY Y N +I L +ALF Sbjct: 135 VLGTSYPPSAGAFSS-AAQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALF 193 Query: 232 ENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVD 291 +D + Y NLFD +VDAV +A+ G N+ V+V+E+GWPS+G A + Sbjct: 194 TASGVVVQDGRFS---YQNLFDAIVDAVFAALERVGGANVAVVVSESGWPSAGGGA---E 247 Query: 292 ATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKG---ERSWGILHQNFT 348 A+ + A+ Y + L+ H+ G G+P R EAY++E+ + K E+++G+ + N Sbjct: 248 ASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFGLFYPNKQ 305 Query: 349 QKYEIEF 355 Y+I F Sbjct: 306 PVYQISF 312
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 2e-73
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 2e-72
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 5e-72
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 3e-70
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 6e-70
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score =  230 bits (588), Expect = 2e-73
 Identities = 113/333 (33%), Positives = 182/333 (54%), Gaps = 26/333 (7%)

Query: 28  IGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTI 87
           IGV Y        + N      PPP  V S+  S NI  +RL + + + ++A   +N  +
Sbjct: 1   IGVCY------GMLGNN----LPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQV 50

Query: 88  LLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAV 147
           LL +P + V +LA+N + A  W+ R+V+ ++P      I+VGN++     DL+ ++LPA+
Sbjct: 51  LLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELI-PGSDLAQYILPAM 109

Query: 148 RNVHLALHDLGI-KKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNS 206
           RN++ AL   G+  +I VST      ++ TS+PPS+  F   A +  + P++QFL    +
Sbjct: 110 RNIYNALSSAGLQNQIKVSTAVD-TGVLGTSYPPSAGAFSSAAQAY-LSPIVQFLASNGA 167

Query: 207 SFLVNVYPYNMYRLN-CEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAV 265
             LVNVYPY  Y  N  +I L +ALF       +D       Y NLFD +VDAV +A+  
Sbjct: 168 PLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDG---RFSYQNLFDAIVDAVFAALER 224

Query: 266 AGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAY 325
            G  N+ V+V+E+GWPS+G  A   +A+ + A+ Y + L+ H+    G+P R     EAY
Sbjct: 225 VGGANVAVVVSESGWPSAGGGA---EASTSNAQTYNQNLIRHVGG--GTPRRPGKEIEAY 279

Query: 326 VYELVDIEVKG---ERSWGILHQNFTQKYEIEF 355
           ++E+ +   K    E+++G+ + N    Y+I F
Sbjct: 280 IFEMFNENQKAGGIEQNFGLFYPNKQPVYQISF 312


>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.85
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.58
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.52
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.42
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 99.2
3cmg_A667 Putative beta-galactosidase; structural genomics, 98.57
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.53
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 98.51
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.41
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.38
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.32
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.23
3fn9_A692 Putative beta-galactosidase; structural genomics, 98.18
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.15
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.06
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.03
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 98.03
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.0
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.0
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 98.0
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.98
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.97
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 97.95
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.85
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.84
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.83
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 97.8
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 97.8
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.79
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 97.78
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.75
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.72
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.71
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.7
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 97.6
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.58
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 97.52
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.34
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.21
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.17
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.15
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.04
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.02
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 96.9
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.89
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 96.89
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.89
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 96.81
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 96.66
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 96.59
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 96.56
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 96.38
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 96.34
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 96.31
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 96.27
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 96.17
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 96.15
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 96.11
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 96.06
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 96.04
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 95.87
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 95.73
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 95.69
3d3a_A 612 Beta-galactosidase; protein structure initiative I 95.68
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 95.65
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 95.43
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 95.37
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 95.28
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 95.06
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 95.03
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 94.91
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 94.8
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 94.31
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 93.82
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 93.73
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 93.16
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 92.56
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 92.01
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 91.41
2wnw_A447 Activated by transcription factor SSRB; hydrolase, 90.49
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 90.19
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 89.74
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 89.32
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 87.82
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 87.33
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 87.03
4aw7_A 591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 85.85
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 85.39
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 84.89
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 83.99
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 83.83
2nt0_A497 Glucosylceramidase; cerezyme, glucocerebrosidase, 83.0
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 82.62
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 82.18
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 80.46
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-95  Score=716.74  Aligned_cols=307  Identities=33%  Similarity=0.602  Sum_probs=292.6

Q ss_pred             eeEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHcCCCCeEEeecCChHHHHHHhcCCceEEEcCCCCChhhHhhhHHHHH
Q 035682           28 IGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQ  107 (392)
Q Consensus        28 ~GvnYg~py~~~~~~~~~~~nlps~~~v~~llks~~i~~VRlY~~d~~vL~A~~~tgikV~lGV~n~~l~~la~~~~~A~  107 (392)
                      ||||||          +.|+|||+|++|+++||+++|++||||++||++|+|++++||+|+|||||+++++++ ++++|.
T Consensus         2 iGvnyG----------~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~   70 (316)
T 3em5_A            2 VGVCYG----------MQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAK   70 (316)
T ss_dssp             CEEECC----------CCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHH
T ss_pred             eeEEcC----------cCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHH
Confidence            799999          899999999999999999999999999999999999999999999999999999999 889999


Q ss_pred             HHHHhhccccCCCCcEEEEEecccccCCCCCC---hhHHHHHHHHHHHHHHhcCCC-ceeeecccccceeecccCCCCCC
Q 035682          108 RWLYRHVLPFYPRSKISLISVGNDIFDTTPDL---SPFLLPAVRNVHLALHDLGIK-KIPVSTTFSFFNIITTSFPPSSA  183 (392)
Q Consensus       108 ~Wv~~nI~~~~p~~~I~~I~VGNEvL~~~~~~---~~~Lv~am~nvr~aL~~~Gl~-~I~VsT~~s~~~vl~~s~pPS~g  183 (392)
                      +||++||.+|+|.++|++|+||||++.++..+   +++|+|+|++||++|+++||+ +|||+|+++ |++|.++||||+|
T Consensus        71 ~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s-~~vl~~s~pPS~g  149 (316)
T 3em5_A           71 SWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAID-LTLVGNSYPPSAG  149 (316)
T ss_dssp             HHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEC-TTSEEECSSGGGC
T ss_pred             HHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEeccc-ccccccCCCCCCc
Confidence            99999999999999999999999999997765   899999999999999999997 599999999 9999999999999


Q ss_pred             cccccchhhhhHHHHHHHhhcCCcceeeccCCcccccC-CCCCccccccccCCCccccCCCCCcccchhHHHHHHHHHHH
Q 035682          184 QFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLN-CEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISA  262 (392)
Q Consensus       184 ~f~~~~~~~~~~~~ldFL~~~~s~~~vNiyPyf~~~~~-~~i~l~yA~f~~~~~~~~dd~~~~~~Y~nlfda~vdav~~a  262 (392)
                      .|++++.++| +|+++||++++||||||+||||+|..+ ++|+++||+|++...+   |++++++|+||||+|+|++++|
T Consensus       150 ~F~~~~~~~~-~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~---~~~~~~~Y~nlfDa~~Da~~~A  225 (316)
T 3em5_A          150 AFRDDVRSYL-NPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVV---VWDGQRGYKNLFDATLDALYSA  225 (316)
T ss_dssp             EECGGGHHHH-HHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCS---EEETTEEECSHHHHHHHHHHHH
T ss_pred             eechhHHHHH-HHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcc---cCCCCccHHHHHHHHHHHHHHH
Confidence            9999998887 999999999999999999999999888 8999999999985433   4558999999999999999999


Q ss_pred             HHHhCCCCccEEEeeeccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCccccEEEEEeeCCCCC-C--Ccc
Q 035682          263 MAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVK-G--ERS  339 (392)
Q Consensus       263 ~~~~g~~~~~VvVtETGWPS~G~~~~~~~aS~~na~~y~~~li~~~~~~~Gtp~rp~~~~~~y~Fe~FDe~wK-G--E~~  339 (392)
                      |+|+|+++++|+|+||||||+|+    ++||++||++|+++++||+  +.|||+||+..+++||||+|||+|| +  |||
T Consensus       226 l~~~g~~~~~v~V~EtGWPs~G~----~~as~~na~~y~~~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~~~~E~~  299 (316)
T 3em5_A          226 LERASGGSLEVVVSESGWPSAGA----FAATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQPEVEKH  299 (316)
T ss_dssp             HHHTTCTTCCEEEEEECCCSSSS----TTCCHHHHHHHHHHHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCSSGGGGC
T ss_pred             HHHcCCCCCceEeccccCCCCCC----CCCCHHHHHHHHHHHHHhc--cCCCCCCCCCCceEEEEEeecCCCCCCCCCce
Confidence            99999999999999999999995    5899999999999999999  5799999988999999999999999 5  999


Q ss_pred             eEeeecCCceeEEEeee
Q 035682          340 WGILHQNFTQKYEIEFS  356 (392)
Q Consensus       340 wGlf~~d~~~ky~l~~~  356 (392)
                      ||||++|++|||+|+|+
T Consensus       300 ~Glf~~d~~~ky~l~~~  316 (316)
T 3em5_A          300 FGLFFPNKWQKYNLNFS  316 (316)
T ss_dssp             CCSBCTTSCBSSCCCCC
T ss_pred             eeEECCCCCEeecCCCC
Confidence            99999999999999873



>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 392
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-77
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 5e-71
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 6e-70
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
 Score =  240 bits (613), Expect = 1e-77
 Identities = 110/332 (33%), Positives = 179/332 (53%), Gaps = 24/332 (7%)

Query: 28  IGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTI 87
           IGV Y        + N      PPP  V S+  S NI  +RL + + + ++A   +N  +
Sbjct: 1   IGVCYG------MLGNN----LPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQV 50

Query: 88  LLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAV 147
           LL +P + V +LA+N + A  W+ R+V+ ++P      I+VGN++     DL+ ++LPA+
Sbjct: 51  LLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELI-PGSDLAQYILPAM 109

Query: 148 RNVHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSS 207
           RN++ AL   G++     +T     ++ TS+PPS+  F   A +  + P++QFL    + 
Sbjct: 110 RNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQA-YLSPIVQFLASNGAP 168

Query: 208 FLVNVYPYNMYRLNCE-IPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAVA 266
            LVNVYPY  Y  N   I L +ALF       +D       Y NLFD +VDAV +A+   
Sbjct: 169 LLVNVYPYFSYTGNPGQISLPYALFTASGVVVQD---GRFSYQNLFDAIVDAVFAALERV 225

Query: 267 GHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYV 326
           G  N+ V+V+E+GWPS+G  A   +A+ + A+ Y + L+ H+    G+P R     EAY+
Sbjct: 226 GGANVAVVVSESGWPSAGGGA---EASTSNAQTYNQNLIRHVGG--GTPRRPGKEIEAYI 280

Query: 327 YELVDIEVKG---ERSWGILHQNFTQKYEIEF 355
           +E+ +   K    E+++G+ + N    Y+I F
Sbjct: 281 FEMFNENQKAGGIEQNFGLFYPNKQPVYQISF 312


>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.08
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.99
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.8
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.71
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.69
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.64
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.53
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.39
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 98.22
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.1
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 98.02
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.9
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 97.9
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 97.87
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 97.8
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.79
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.79
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 97.76
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.7
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 97.63
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.58
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.49
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.15
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 97.02
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 97.01
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 96.58
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 96.48
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 96.35
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 96.19
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 96.08
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 96.05
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.02
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 93.79
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 91.74
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 89.35
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 87.3
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 86.85
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 86.33
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 85.32
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 84.51
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 84.15
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 82.27
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 82.13
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 80.21
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=100.00  E-value=4.4e-84  Score=634.63  Aligned_cols=307  Identities=36%  Similarity=0.653  Sum_probs=289.8

Q ss_pred             eeEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHcCCCCeEEeecCChHHHHHHhcCCceEEEcCCCCChhhHhhhHHHHH
Q 035682           28 IGVTYAPPILAPTIANPHPPPPPPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQ  107 (392)
Q Consensus        28 ~GvnYg~py~~~~~~~~~~~nlps~~~v~~llks~~i~~VRlY~~d~~vL~A~~~tgikV~lGV~n~~l~~la~~~~~A~  107 (392)
                      ||||||          +.|+|||||++|+++||+++|++||||++||+||+|++++||+|+|||||+++..++++++.|+
T Consensus         1 ~gi~yg----------~~~~nlps~~~vv~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~   70 (312)
T d2cyga1           1 IGVCYG----------MLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAG   70 (312)
T ss_dssp             CEEECC----------CCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHH
T ss_pred             CeeeCC----------CccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHH
Confidence            699999          8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccccCCCCcEEEEEecccccCCCCCChhHHHHHHHHHHHHHHhcCCC-ceeeecccccceeecccCCCCCCccc
Q 035682          108 RWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRNVHLALHDLGIK-KIPVSTTFSFFNIITTSFPPSSAQFQ  186 (392)
Q Consensus       108 ~Wv~~nI~~~~p~~~I~~I~VGNEvL~~~~~~~~~Lv~am~nvr~aL~~~Gl~-~I~VsT~~s~~~vl~~s~pPS~g~f~  186 (392)
                      +|++++|.+|+|.++|++|+||||+|.+... ...++++|+++|++|+.+|+. .|+++++++ +++|..++|||++.|+
T Consensus        71 ~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~-~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~-~~~~~~s~p~sa~~~~  148 (312)
T d2cyga1          71 DWIRRNVVAYWPSVSFRYIAVGNELIPGSDL-AQYILPAMRNIYNALSSAGLQNQIKVSTAVD-TGVLGTSYPPSAGAFS  148 (312)
T ss_dssp             HHHHHHTGGGTTTSEEEEEEEEESCTTTSTT-GGGHHHHHHHHHHHHHHTTCTTTSEEEEEEE-GGGBSCCSSGGGCCBC
T ss_pred             HHHHHHHhccCCCceEEEEEecCEEeeCCcC-chhhcccHHHHHHHHHHCCCCCCceeeeeee-eeccccCCCCcccccc
Confidence            9999999999999999999999999998654 567889999999999999997 599999999 9999999999999999


Q ss_pred             ccchhhhhHHHHHHHhhcCCcceeeccCCcccccC-CCCCccccccccCCCccccCCCCCcccchhHHHHHHHHHHHHHH
Q 035682          187 EPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLN-CEIPLGFALFENYPFNFRDDLITGVRYTNLFDVMVDAVISAMAV  265 (392)
Q Consensus       187 ~~~~~~~~~~~ldFL~~~~s~~~vNiyPyf~~~~~-~~i~l~yA~f~~~~~~~~dd~~~~~~Y~nlfda~vdav~~a~~~  265 (392)
                      +++.+.| ++++|||+.++||||+|+||||++..+ ..++++||+|+++...+.   .++..|+|+||+|+|++++||++
T Consensus       149 ~~~~~~l-~~~~~fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~---~~~~~y~n~~d~~~d~~~~a~~~  224 (312)
T d2cyga1         149 SAAQAYL-SPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQ---DGRFSYQNLFDAIVDAVFAALER  224 (312)
T ss_dssp             HHHHHHH-HHHHHHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEE---ETTEEECSHHHHHHHHHHHHHHT
T ss_pred             chhHHHH-HHHHHHHHhcCCeeeEeccchhhhccCcccccchhhhccCCCcccc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9988887 999999999999999999999999888 789999999998754433   38899999999999999999999


Q ss_pred             hCCCCccEEEeeeccCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCccccEEEEEeeCCCCC-C--CcceEe
Q 035682          266 AGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVK-G--ERSWGI  342 (392)
Q Consensus       266 ~g~~~~~VvVtETGWPS~G~~~~~~~aS~~na~~y~~~li~~~~~~~Gtp~rp~~~~~~y~Fe~FDe~wK-G--E~~wGl  342 (392)
                      +|+++++|+|+||||||+|+.   +.||++||++|++++++++  ++|||+||+.++++||||+|||+|| |  ||||||
T Consensus       225 ~g~~~~~ivI~EtGWPs~G~~---~~as~~na~~y~~~l~~~~--~~gtp~~~~~~i~~f~FeaFDE~wK~G~~E~~wGl  299 (312)
T d2cyga1         225 VGGANVAVVVSESGWPSAGGG---AEASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFGL  299 (312)
T ss_dssp             TTCTTCCEEEEEECCCSSSSS---TTSSHHHHHHHHHHHHHHG--GGCCSSSCSSCCCEEESCSBCCTTSCSSGGGCCCS
T ss_pred             hCCCCCceEEecCCcccCCCC---CCCCHHHHHHHHHHHHHHH--hcCCCCCCCCCccEEEEeEeCCCCCCCCccCcccc
Confidence            999999999999999999953   5799999999999999999  4599999999999999999999999 5  999999


Q ss_pred             eecCCceeEEEee
Q 035682          343 LHQNFTQKYEIEF  355 (392)
Q Consensus       343 f~~d~~~ky~l~~  355 (392)
                      |++||+|||+|+|
T Consensus       300 f~~d~~~ky~l~f  312 (312)
T d2cyga1         300 FYPNKQPVYQISF  312 (312)
T ss_dssp             BCTTSCBSSCCCC
T ss_pred             CCCCCCEecCCCC
Confidence            9999999999986



>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure