Citrus Sinensis ID: 035709

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MECRCQGHTHAEQRRDAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHccccccccccccccccccEEEEEccEEEccccccccccccccccHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHccccccccccccccccccccEEEEEcHEEEEcccccccccHcccHHHHHHHHHccc
Coil and Loop (DISEMBL)
mecrcqghthaeqRRDAQTYKKfnklpadeegqtpdkKALVVCFGELLIdflptesgvSLAKASAFRKERLLMLP
Flexible Loop (DISEMBL)
mecrcqghthaeqrrdaqtyKKFNklpadeegqtpdKKALVVCFGELLIDflptesgvslakasafrkerllmlp
Low Complexity Region (SEG)
MECRCQGHTHAEQRRDAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Disordered region (IsUnstruct)
**************************************ALVVCFGELLIDFLPTESGVSL***************
Disordered Region (DISOPRED)
****************************************VVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Disordered Region (DISEMBL)
***************DAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Disordered Region (DISPRO)
********************K**NKLPA******PDKKALVVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MECRCQGHTHAEQRRDAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRKERLLMLP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q9LNE3	329	Probable fructokinase-2 O	no	no	0.44	0.100	0.696	2e-06
Q9SID0	325	Probable fructokinase-1 O	no	no	0.413	0.095	0.709	1e-05
Q9M1B9	326	Probable fructokinase-4 O	no	no	0.426	0.098	0.656	9e-05
Q6XZ79	323	Fructokinase-1 OS=Zea may	N/A	no	0.386	0.089	0.724	0.0001
A2WXV8	323	Fructokinase-1 OS=Oryza s	N/A	no	0.426	0.099	0.656	0.0001
Q0JGZ6	323	Fructokinase-1 OS=Oryza s	no	no	0.426	0.099	0.656	0.0002
Q7XJ81	328	Fructokinase-2 OS=Solanum	N/A	no	0.4	0.091	0.666	0.0002
Q42896	328	Fructokinase-2 OS=Solanum	N/A	no	0.4	0.091	0.666	0.0002
Q9LNE4	345	Probable fructokinase-3 O	no	no	0.426	0.092	0.593	0.0002
P37829	319	Fructokinase OS=Solanum t	N/A	no	0.4	0.094	0.666	0.0002

>sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/33 (69%), Positives = 28/33 (84%)

Query: 36 DKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          D K LVV FGE+LIDF+PTESGVSL+++S F K
Sbjct: 7  DNKGLVVSFGEMLIDFVPTESGVSLSESSGFLK 39

May play an important role in maintaining the flux of carbon towards starch formation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4

>sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/31 (70%), Positives = 26/31 (83%)

Query: 38 KALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          K L+V FGE+LIDF+PTESGVSLA+A  F K
Sbjct: 7  KGLIVSFGEMLIDFVPTESGVSLAEAPGFLK 37

May play an important role in maintaining the flux of carbon towards starch formation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +K+L+V FGE+LIDF+PT SGVSLA A  F K
Sbjct: 7  EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIK 38

May play an important role in maintaining the flux of carbon towards starch formation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q6XZ79|SCRK1_MAIZE Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 25/29 (86%)

Query: 40 LVVCFGELLIDFLPTESGVSLAKASAFRK 68
          LVV FGE+LIDF+PT +GVSLA+A AF K
Sbjct: 7  LVVSFGEMLIDFVPTVAGVSLAEAPAFLK 35

May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|A2WXV8|SCRK1_ORYSI Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +  LVV FGE+LIDF+PT +GVSLA+A AF K
Sbjct: 4  RSELVVSFGEMLIDFVPTVAGVSLAEAPAFVK 35

May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q0JGZ6|SCRK1_ORYSJ Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +  LVV FGE+LIDF+PT +GVSLA+A AF K
Sbjct: 4  RSELVVSFGEMLIDFVPTVAGVSLAEAPAFVK 35

May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 39 ALVVCFGELLIDFLPTESGVSLAKASAFRK 68
           L+V FGE+LIDF+PT SGVSLA+A  F K
Sbjct: 10 GLIVSFGEMLIDFVPTVSGVSLAEAPGFLK 39

May play an important role in maintaining the flux of carbon towards starch formation.

Solanum habrochaites (taxid: 62890)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 39 ALVVCFGELLIDFLPTESGVSLAKASAFRK 68
           L+V FGE+LIDF+PT SGVSLA+A  F K
Sbjct: 10 GLIVSFGEMLIDFVPTVSGVSLAEAPGFLK 39

May play an important role in maintaining the flux of carbon towards starch formation.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|Q9LNE4|SCRK3_ARATH Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 26/32 (81%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +K L+V FGE+LIDF+PT SGVSL+++  F K
Sbjct: 7  EKGLIVSFGEMLIDFVPTVSGVSLSESPGFLK 38

May play an important role in maintaining the flux of carbon towards starch formation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

>sp|P37829|SCRK_SOLTU Fructokinase OS=Solanum tuberosum PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 39 ALVVCFGELLIDFLPTESGVSLAKASAFRK 68
           L+V FGE+LIDF+PT SGVSLA+A  F K
Sbjct: 11 GLIVSFGEMLIDFVPTVSGVSLAEAPGFLK 40

May play an important role in maintaining the flux of carbon towards starch formation.

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
350534424	386	fructokinase 3 [Solanum lycopersicum] gi	0.573	0.111	0.604	1e-06
418731477	389	fructokinase 3 [Solanum tuberosum]	0.573	0.110	0.604	2e-06
147821009	421	hypothetical protein VITISV_014671 [Viti	0.573	0.102	0.534	6e-06
148908243	408	unknown [Picea sitchensis]	0.52	0.095	0.641	6e-06
225455661	346	PREDICTED: fructokinase-2 [Vitis vinifer	0.653	0.141	0.54	7e-06
225453158	384	PREDICTED: probable fructokinase-2 [Viti	0.573	0.111	0.534	1e-05
297792499	343	pfkB-type carbohydrate kinase family pro	0.466	0.102	0.685	1e-05
15242193	343	fructokinase [Arabidopsis thaliana] gi|1	0.466	0.102	0.685	1e-05
350539491	347	fructokinase [Solanum lycopersicum] gi|2	0.573	0.123	0.581	1e-05
356534175	347	PREDICTED: putative fructokinase-5-like	0.426	0.092	0.75	2e-05

>gi|350534424|ref|NP_001234396.1| fructokinase 3 [Solanum lycopersicum] gi|38604456|gb|AAR24912.1| fructokinase 3 [Solanum lycopersicum]

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 34/43 (79%)

Query: 26 LPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          LP+D      D+ +LVVCFGE+LIDF+PT SG+SLA+A AF+K
Sbjct: 53 LPSDNGLVEKDESSLVVCFGEMLIDFVPTTSGLSLAEAPAFKK 95

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|418731477|gb|AFX67038.1| fructokinase 3 [Solanum tuberosum]

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 34/43 (79%)

Query: 26 LPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          LP+D      D+ +LVVCFGE+LIDF+PT SG+SLA+A AF+K
Sbjct: 56 LPSDNGPLEKDESSLVVCFGEMLIDFVPTISGLSLAEAPAFKK 98

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821009|emb|CAN68744.1| hypothetical protein VITISV_014671 [Vitis vinifera]

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 32/43 (74%)

Query: 26 LPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +P D       + +LVVCFGE+LIDF+PT +G+SLA+A AF+K
Sbjct: 51 IPGDNGSPETKENSLVVCFGEMLIDFVPTSNGLSLAEAPAFKK 93

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148908243|gb|ABR17236.1| unknown [Picea sitchensis]

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 31/39 (79%)

Query: 30  EEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
           + G+  +   LVVCFGE+LIDF+PT SGVSLAKA AF+K
Sbjct: 79  DNGKPSEVSPLVVCFGEMLIDFVPTVSGVSLAKAPAFKK 117

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455661|ref|XP_002263176.1| PREDICTED: fructokinase-2 [Vitis vinifera] gi|296084079|emb|CBI24467.3| unnamed protein product [Vitis vinifera]

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 19 TYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          T   +  LP +  G   +K +LVVCFGE+LIDF+PT  GVSLA+A AF+K
Sbjct: 6  TSGNYEDLPLNT-GGADNKSSLVVCFGEMLIDFVPTVGGVSLAEAPAFKK 54

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453158|ref|XP_002274388.1| PREDICTED: probable fructokinase-2 [Vitis vinifera] gi|296087158|emb|CBI33532.3| unnamed protein product [Vitis vinifera]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 32/43 (74%)

Query: 26 LPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +P D       + +LVVCFGE+LIDF+PT +G+SLA+A AF+K
Sbjct: 51 IPGDNGSPETKENSLVVCFGEMLIDFVPTSNGLSLAEAPAFKK 93

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792499|ref|XP_002864134.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297309969|gb|EFH40393.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 34 TPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          T D + LVVCFGE+LIDF+PT  GVSLA+A AF+K
Sbjct: 17 TRDSETLVVCFGEMLIDFVPTVGGVSLAEAPAFKK 51

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242193|ref|NP_199996.1| fructokinase [Arabidopsis thaliana] gi|13878053|gb|AAK44104.1|AF370289_1 putative fructokinase 1 [Arabidopsis thaliana] gi|10177882|dbj|BAB11252.1| fructokinase 1 [Arabidopsis thaliana] gi|17104645|gb|AAL34211.1| putative fructokinase 1 [Arabidopsis thaliana] gi|332008749|gb|AED96132.1| fructokinase [Arabidopsis thaliana]

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 34 TPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          T D + LVVCFGE+LIDF+PT  GVSLA+A AF+K
Sbjct: 17 TRDSETLVVCFGEMLIDFVPTVGGVSLAEAPAFKK 51

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539491|ref|NP_001233893.1| fructokinase [Solanum lycopersicum] gi|2102691|gb|AAB57733.1| fructokinase [Solanum lycopersicum]

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 30/43 (69%)

Query: 26 LPADEEGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          L  +  G    K  LVVCFGE+LIDF+PT +GVSLA+A AF K
Sbjct: 13 LSLNRNGAVSKKSHLVVCFGEMLIDFIPTVAGVSLAEAPAFEK 55

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534175|ref|XP_003535633.1| PREDICTED: putative fructokinase-5-like [Glycine max]

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          K ALVVCFGE+LIDF+PT  GVSLA+A AF+K
Sbjct: 27 KSALVVCFGEILIDFVPTVCGVSLAEAPAFKK 58

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
TAIR|locus:2165361	343	AT5G51830 [Arabidopsis thalian	0.466	0.102	0.685	2.8e-07
TAIR|locus:2198831	329	AT1G06030 [Arabidopsis thalian	0.44	0.100	0.696	1.5e-06
TAIR|locus:2028987	384	AT1G66430 [Arabidopsis thalian	0.493	0.096	0.605	5.4e-06
TAIR|locus:2061320	325	AT2G31390 [Arabidopsis thalian	0.413	0.095	0.709	6.7e-06
TAIR|locus:2097553	326	AT3G59480 [Arabidopsis thalian	0.426	0.098	0.656	5e-05
TAIR|locus:2198821	345	AT1G06020 [Arabidopsis thalian	0.426	0.092	0.593	0.00015
TAIR|locus:2122789	324	AT4G10260 [Arabidopsis thalian	0.386	0.089	0.620	0.00061

TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:    34 TPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             T D + LVVCFGE+LIDF+PT  GVSLA+A AF+K
Sbjct:    17 TRDSETLVVCFGEMLIDFVPTVGGVSLAEAPAFKK 51

GO:0004747 "ribokinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2198831 AT1G06030 [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)

Query:    36 DKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             D K LVV FGE+LIDF+PTESGVSL+++S F K
Sbjct:     7 DNKGLVVSFGEMLIDFVPTESGVSLSESSGFLK 39

GO:0004747 "ribokinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

TAIR|locus:2028987 AT1G66430 [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 23/38 (60%), Positives = 29/38 (76%)

Query:    31 EGQTPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             +G T +    VVCFGE+LIDF+PT SG+SLA A AF+K
Sbjct:    57 DGSTQESP-YVVCFGEMLIDFVPTTSGLSLADAPAFKK 93

GO:0004747 "ribokinase activity" evidence=IEA

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2061320 AT2G31390 [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)

Query:    38 KALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             K L+V FGE+LIDF+PTESGVSLA+A  F K
Sbjct:     7 KGLIVSFGEMLIDFVPTESGVSLAEAPGFLK 37

GO:0004747 "ribokinase activity" evidence=IEA

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2097553 AT3G59480 [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query:    37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             +K+L+V FGE+LIDF+PT SGVSLA A  F K
Sbjct:     7 EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIK 38

GO:0004747 "ribokinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

TAIR|locus:2198821 AT1G06020 [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
 Identities = 19/32 (59%), Positives = 26/32 (81%)

Query:    37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
             +K L+V FGE+LIDF+PT SGVSL+++  F K
Sbjct:     7 EKGLIVSFGEMLIDFVPTVSGVSLSESPGFLK 38

GO:0004747 "ribokinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

TAIR|locus:2122789 AT4G10260 [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00061, P = 0.00061
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:    40 LVVCFGELLIDFLPTESGVSLAKASAFRK 68
             L+V FGE+LIDF+P  SGVSLA+++ F K
Sbjct:     6 LIVSFGEMLIDFVPDTSGVSLAESTGFLK 34


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       75        75   0.00091  102 3  11 22  0.36    29
                                                     29  0.47    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  502 (53 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.09u 0.14s 8.23t   Elapsed:  00:00:00
  Total cpu time:  8.09u 0.14s 8.23t   Elapsed:  00:00:00
  Start:  Fri May 10 04:53:37 2013   End:  Fri May 10 04:53:37 2013

GO:0004747 "ribokinase activity" evidence=IEA

GO:0006014 "D-ribose metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

No confident hit detected by STRING

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	75
PLN02323	330	PLN02323, PLN02323, probable fructokinase	2e-13
cd01167	295	cd01167, bac_FRK, Fructokinases (FRKs) mainly from	3e-04

>gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase

 Score = 62.7 bits (153), Expect = 2e-13
 Identities = 23/35 (65%), Positives = 30/35 (85%)

Query: 34 TPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          +  + +LVVCFGE+LIDF+PT SGVSLA+A AF+K
Sbjct: 6  STAESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKK 40

Length = 330

>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 14/26 (53%), Positives = 15/26 (57%)

Query: 40 LVVCFGELLIDFLPTESGVSLAKASA 65
           VVCFGE LIDF+P  SG       A
Sbjct: 1  KVVCFGEALIDFIPEGSGAPETFTKA 26

This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
PLN02543	496	pfkB-type carbohydrate kinase family protein	97.54
PLN02967	581	kinase	95.93
cd01943	328	MAK32 MAK32 kinase. MAK32 is a protein found prima	94.12
PLN02323	330	probable fructokinase	92.33
KOG2855	330	consensus Ribokinase [Carbohydrate transport and m	91.59
cd01944	289	YegV_kinase_like YegV-like sugar kinase. Found onl	81.52
cd01940	264	Fructoselysine_kinase_like Fructoselysine kinase-l	80.84
PRK09813	260	fructoselysine 6-kinase; Provisional	80.54
PRK09434	304	aminoimidazole riboside kinase; Provisional	80.06

>PLN02543 pfkB-type carbohydrate kinase family protein

Probab=97.54  E-value=5.1e-05  Score=61.25  Aligned_cols=22  Identities=41%  Similarity=0.783  Sum_probs=18.7

Q ss_pred             CCCccEEEecchhhhhccCCCC
Q 035709           36 DKKALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        36 ~~~~dVlcIGEaLIDFIP~~~G   57 (75)
                      +-.+.|+||||+||||+|.+.+
T Consensus       123 ~~~~~v~~~Ge~liDf~~~~~~  144 (496)
T PLN02543        123 DDPPLVCCFGAVQKEFVPTVRV  144 (496)
T ss_pred             CCCCeEEEeChhhhhhcCCCcc
Confidence            4456699999999999998775

>PLN02967 kinase

Probab=95.93  E-value=0.0049  Score=51.23  Aligned_cols=19  Identities=37%  Similarity=0.726  Sum_probs=16.3

Q ss_pred             CCCccEEEecchhhhhccC
Q 035709           36 DKKALVVCFGELLIDFLPT   54 (75)
Q Consensus        36 ~~~~dVlcIGEaLIDFIP~   54 (75)
                      +-.+.|+||||+||||+|.
T Consensus       194 ~~~~~V~~iGe~l~D~~p~  212 (581)
T PLN02967        194 GWPPLVCCFGAAQHAFVPS  212 (581)
T ss_pred             CCCCeEEEECchhheeccc
Confidence            4556699999999999995

>cd01943 MAK32 MAK32 kinase

Probab=94.12  E-value=0.016  Score=42.96  Aligned_cols=17  Identities=18%  Similarity=0.241  Sum_probs=15.2

Q ss_pred             cEEEecchhhhhccCCC
Q 035709           40 LVVCFGELLIDFLPTES   56 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~~   56 (75)
                      +|+||||+|||||+...
T Consensus         1 ~~~~~G~~~~d~i~~~~   17 (328)
T cd01943           1 DFTTLGMFIIDEIEYPD   17 (328)
T ss_pred             CccccCcEEeeccccCC
Confidence            68999999999999864

MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.

>PLN02323 probable fructokinase

Probab=92.33  E-value=0.11  Score=37.65  Aligned_cols=21  Identities=67%  Similarity=1.209  Sum_probs=17.5

Q ss_pred             CCCccEEEecchhhhhccCCC
Q 035709           36 DKKALVVCFGELLIDFLPTES   56 (75)
Q Consensus        36 ~~~~dVlcIGEaLIDFIP~~~   56 (75)
                      .+..+|++|||++||+++...
T Consensus         8 ~~~~~i~~iG~~~vD~~~~~~   28 (330)
T PLN02323          8 AESSLVVCFGEMLIDFVPTVS   28 (330)
T ss_pred             CCCCcEEEechhhhhhccCCC
Confidence            566789999999999998643

>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]

Probab=91.59  E-value=0.11  Score=41.26  Aligned_cols=35  Identities=34%  Similarity=0.652  Sum_probs=26.4

Q ss_pred             CCCCccEEEecchhhhhccCCCCCCcc----chhhhhhc
Q 035709           35 PDKKALVVCFGELLIDFLPTESGVSLA----KASAFRKE   69 (75)
Q Consensus        35 ~~~~~dVlcIGEaLIDFIP~~~G~sL~----~v~sFek~   69 (75)
                      -...+.|+|+|+++|||+|...+.+..    ..+.|.+.
T Consensus         6 ~~~~~~vv~fGs~~~D~V~~~~~~p~~ge~~~~~~f~~~   44 (330)
T KOG2855|consen    6 YGEPPLVVVFGSMLIDFVPSTRRLPNAGETWEPPGFKTA   44 (330)
T ss_pred             ccCCceEEEeccceeeeeeccccCCCccccccCCcceec
Confidence            356789999999999999998776665    34455443

>cd01944 YegV_kinase_like YegV-like sugar kinase

Probab=81.52  E-value=0.58  Score=32.91  Aligned_cols=15  Identities=20%  Similarity=0.437  Sum_probs=13.2

Q ss_pred             cEEEecchhhhhccC
Q 035709           40 LVVCFGELLIDFLPT   54 (75)
Q Consensus        40 dVlcIGEaLIDFIP~   54 (75)
                      +|+||||++||++..
T Consensus         1 ~i~~iG~~~~D~i~~   15 (289)
T cd01944           1 KVLVIGAAVVDIVLD   15 (289)
T ss_pred             CeEEEcceeEEEEee
Confidence            489999999999854

Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like

Probab=80.84  E-value=0.75  Score=31.83  Aligned_cols=16  Identities=13%  Similarity=0.177  Sum_probs=14.6

Q ss_pred             cEEEecchhhhhccCC
Q 035709           40 LVVCFGELLIDFLPTE   55 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~   55 (75)
                      +|++|||+++|.++..
T Consensus         1 ~v~~iG~~~~D~~~~~   16 (264)
T cd01940           1 RLAAIGDNVVDKYLHL   16 (264)
T ss_pred             CeEEEcceEEEEeccC
Confidence            5899999999999975

Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.

>PRK09813 fructoselysine 6-kinase; Provisional

Probab=80.54  E-value=0.89  Score=31.78  Aligned_cols=17  Identities=18%  Similarity=0.360  Sum_probs=15.0

Q ss_pred             ccEEEecchhhhhccCC
Q 035709           39 ALVVCFGELLIDFLPTE   55 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~   55 (75)
                      .+|++|||++||+++..
T Consensus         1 ~~v~~iG~~~~D~~~~~   17 (260)
T PRK09813          1 KKLATIGDNCVDIYPQL   17 (260)
T ss_pred             CeEEEeccceeeecccC
Confidence            37999999999999974

>PRK09434 aminoimidazole riboside kinase; Provisional

Probab=80.06  E-value=1.1  Score=31.94  Aligned_cols=17  Identities=24%  Similarity=0.581  Sum_probs=15.1

Q ss_pred             ccEEEecchhhhhccCC
Q 035709           39 ALVVCFGELLIDFLPTE   55 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~   55 (75)
                      .+|++|||+.||.+|..
T Consensus         3 ~~il~iG~~~iD~~~~~   19 (304)
T PRK09434          3 NKVWVLGDAVVDLIPEG   19 (304)
T ss_pred             CcEEEecchheeeecCC
Confidence            47999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	75
2qcv_A	332	Putative 5-dehydro-2-deoxygluconokinase; structura	3e-08
3pl2_A	319	Sugar kinase, ribokinase family; PFKB PFAM motif,	4e-08
3hj6_A	327	Fructokinase, FRK; fructose, transferase, carbohyd	4e-08
3iq0_A	330	Putative ribokinase II; transferase,kinase,SAD,rib	1e-06
4du5_A	336	PFKB; structural genomics, PSI-biology, NEW YORK s	2e-06
3ewm_A	313	Uncharacterized sugar kinase PH1459; carbohydrate	4e-06
3ljs_A	338	Fructokinase; fructokianse, PSI2, NYSGXRC, structu	1e-05
2v78_A	313	Fructokinase; transferase, PFKB family carbohydrat	1e-05
2dcn_A	311	Hypothetical fructokinase; 2-keto-3-deoxygluconate	2e-05
1v1a_A	309	2-keto-3-deoxygluconate kinase; ATP, structural ge	3e-05
2qhp_A	296	Fructokinase; NP_810670.1, PFKB family carbohydrat	5e-05
2afb_A	351	2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-	4e-04
3ktn_A	346	Carbohydrate kinase, PFKB family; PFKB family,ribo	5e-04
1tyy_A	339	Putative sugar kinase; ribokinase fold, alpha/beta	6e-04
4e69_A	328	2-dehydro-3-deoxygluconokinase; putative sugar kin	7e-04

>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332

 Score = 47.6 bits (114), Expect = 3e-08
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 34 TPDKKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
          + D++  ++  G   ID    E    + +   F K
Sbjct: 7  STDREFDLIAIGRACIDLNAVEYNRPMEETMTFSK 41

>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          V+  G L +D  P +SGV LA   +F K
Sbjct: 11 VLAIGRLGVDIYPLQSGVGLADVQSFGK 38

>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          VV  GE+L+D + TE   SL+++  + +
Sbjct: 24 VVSLGEILVDMISTEEVNSLSQSREYTR 51

>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 5/31 (16%), Positives = 13/31 (41%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRKERL 71
          V   GE+L++ + ++ G    +   +     
Sbjct: 6  VFTIGEILVEIMASKIGQPFDQPGIWNGPYP 36

>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 15/62 (24%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 8  HTHAEQRRDAQTYKKFNKLPADEEGQTPDKKAL-VVCFGELLIDFLPTESGVSLAKASAF 66
          H H               L  +         AL V+ FGE ++  +    G  L  A AF
Sbjct: 2  HHHHHHSSGVD-------LGTENLYFQSMTSALDVITFGEAMMLLVADRPG-PLEHAEAF 53

Query: 67 RK 68
           K
Sbjct: 54 HK 55

>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          +   GELLID +  E G  L     F K
Sbjct: 4  IASIGELLIDLISVEEG-DLKDVRLFEK 30

>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 1/32 (3%)

Query: 37 KKALVVCFGELLIDFLPTESGVSLAKASAFRK 68
           K  ++CFGE LID L            AF +
Sbjct: 3  LKKTILCFGEALIDMLAQPLV-KKGMPRAFLQ 33

>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          V+  GE LI F     G  L   + F K
Sbjct: 4  VIALGEPLIQFNSFNPG-PLRFVNYFEK 30

>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          ++  GE+LI+F     G  L   S F K
Sbjct: 4  LITLGEILIEFNALSPG-PLRHVSYFEK 30

>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          VV  GE L+  +P E G  L        
Sbjct: 4  VVTAGEPLVALVPQEPG-HLRGKRLLEV 30

>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 7/18 (38%), Positives = 9/18 (50%)

Query: 38 KALVVCFGELLIDFLPTE 55
            ++V  GE L D LP  
Sbjct: 3  NNIIVGMGEALWDVLPEG 20

>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          VV FGE+++   P +    + +  +F  
Sbjct: 15 VVTFGEIMLRLSPPDHK-RIFQTDSFDV 41

>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          +  FGE+++ F P E    L +    R 
Sbjct: 5  IAAFGEVMLRFTPPEYL-MLEQTEQLRM 31

>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339

 Score = 35.3 bits (82), Expect = 6e-04
 Identities = 4/17 (23%), Positives = 8/17 (47%)

Query: 41 VVCFGELLIDFLPTESG 57
          V   G+  +D +P +  
Sbjct: 27 VWVIGDASVDLVPEKQN 43

>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 3/23 (13%), Positives = 9/23 (39%)

Query: 41 VVCFGELLIDFLPTESGVSLAKA 63
          ++  GE + +  P +   +    
Sbjct: 26 ILSIGECMAELAPADLPGTYRLG 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
4gm6_A	351	PFKB family carbohydrate kinase; enzyme function i	96.81
3pl2_A	319	Sugar kinase, ribokinase family; PFKB PFAM motif,	95.13
3hj6_A	327	Fructokinase, FRK; fructose, transferase, carbohyd	94.24
4du5_A	336	PFKB; structural genomics, PSI-biology, NEW YORK s	93.91
3ktn_A	346	Carbohydrate kinase, PFKB family; PFKB family,ribo	93.79
3ewm_A	313	Uncharacterized sugar kinase PH1459; carbohydrate	93.0
3ljs_A	338	Fructokinase; fructokianse, PSI2, NYSGXRC, structu	91.57
2qcv_A	332	Putative 5-dehydro-2-deoxygluconokinase; structura	91.47
2qhp_A	296	Fructokinase; NP_810670.1, PFKB family carbohydrat	90.22
1v1a_A	309	2-keto-3-deoxygluconate kinase; ATP, structural ge	88.82
2v78_A	313	Fructokinase; transferase, PFKB family carbohydrat	88.67
3kd6_A	313	Carbohydrate kinase, PFKB family; nucleoside kinas	88.3
3lhx_A	319	Ketodeoxygluconokinase; structural genomics, PSI-2	87.76
3h49_A	325	Ribokinase; transferase,PFKB family,sugar kinase Y	87.72
2dcn_A	311	Hypothetical fructokinase; 2-keto-3-deoxygluconate	87.58
3iq0_A	330	Putative ribokinase II; transferase,kinase,SAD,rib	87.46
4e69_A	328	2-dehydro-3-deoxygluconokinase; putative sugar kin	85.93
2hlz_A	312	Ketohexokinase; non-protein kinase, creatine kinas	81.48
3go6_A	310	Ribokinase RBSK; phosphofructokinase, carbohydrate	81.32

>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}

Probab=96.81  E-value=0.00033  Score=49.36  Aligned_cols=31  Identities=23%  Similarity=0.410  Sum_probs=25.0

Q ss_pred             ccEEEecchhhhhccCCCCCCccchhhhhhcc
Q 035709           39 ALVVCFGELLIDFLPTESGVSLAKASAFRKER   70 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~~G~sL~~v~sFek~P   70 (75)
                      .+|+||||+||||.|... .++..+..|+.++
T Consensus        25 ~kv~~~GE~m~~l~p~~~-~~~~~~~~~~~~~   55 (351)
T 4gm6_A           25 KQVVTIGELLMRLSTQQG-IPFSQTTALDIHI   55 (351)
T ss_dssp             CEEEEECCCEEEEECCTT-CCGGGCSEEEEEE
T ss_pred             CCEEEEcceeEEecCCCC-CCccccCeEEEec
Confidence            589999999999999764 4688888887653

>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0

Probab=95.13  E-value=0.0086  Score=41.46  Aligned_cols=31  Identities=35%  Similarity=0.577  Sum_probs=22.8

Q ss_pred             CCccEEEecchhhhhccCCCCCCccchhhhh
Q 035709           37 KKALVVCFGELLIDFLPTESGVSLAKASAFR   67 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP~~~G~sL~~v~sFe   67 (75)
                      +.++|++|||++||+++...+.++..+..|.
T Consensus         7 ~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~   37 (319)
T 3pl2_A            7 STHEVLAIGRLGVDIYPLQSGVGLADVQSFG   37 (319)
T ss_dssp             CCCSEEEESCCEEEECBSSSSCCGGGCCCBC
T ss_pred             cCCCEEEEChhheeeecccCCCCccccceee
Confidence            4578999999999999976554454444444

>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}

Probab=94.24  E-value=0.015  Score=40.66  Aligned_cols=31  Identities=32%  Similarity=0.525  Sum_probs=20.5

Q ss_pred             CCCccEEEecchhhhhccCCCCCCccchhhh
Q 035709           36 DKKALVVCFGELLIDFLPTESGVSLAKASAF   66 (75)
Q Consensus        36 ~~~~dVlcIGEaLIDFIP~~~G~sL~~v~sF   66 (75)
                      .+.++|++|||++||+++.....+...+..|
T Consensus        19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~   49 (327)
T 3hj6_A           19 KGDLDVVSLGEILVDMISTEEVNSLSQSREY   49 (327)
T ss_dssp             ---CCEEEESCCEEEEECCCCCSSGGGCCEE
T ss_pred             cCCCCEEEEccceEEEeccCCCCCcccccee
Confidence            4567899999999999987654344443333

>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}

Probab=93.91  E-value=0.015  Score=41.11  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=17.7

Q ss_pred             hHHHHHHhcCCCCCCCCCCCCCCccEEEecchhhhhccCCCC
Q 035709           16 DAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~dVlcIGEaLIDFIP~~~G   57 (75)
                      |-...++||-...     ...+.++|+||||++||+++...|
T Consensus         9 ~~~~~~~~~~~~~-----~m~~~~~vlviG~~~iD~~~~~~g   45 (336)
T 4du5_A            9 SGVDLGTENLYFQ-----SMTSALDVITFGEAMMLLVADRPG   45 (336)
T ss_dssp             ----------------------CEEEEEECCCEEEEEESSSS
T ss_pred             ccccccchheeee-----ccCCCCCEEEEChhhhhccCCCCC
Confidence            3444677774422     234567999999999999998655

>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}

Probab=93.79  E-value=0.02  Score=40.20  Aligned_cols=19  Identities=32%  Similarity=0.621  Sum_probs=16.1

Q ss_pred             ccEEEecchhhhhccCCCC
Q 035709           39 ALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~~G   57 (75)
                      .+|++|||++||++|...+
T Consensus         3 ~~v~viG~~~~D~~~~~~~   21 (346)
T 3ktn_A            3 LKIAAFGEVMLRFTPPEYL   21 (346)
T ss_dssp             CEEEEECCCEEEEECSTTC
T ss_pred             CcEEEeChhhhhhcCCCCC
Confidence            5799999999999986544

>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*

Probab=93.00  E-value=0.025  Score=39.24  Aligned_cols=19  Identities=47%  Similarity=0.910  Sum_probs=16.5

Q ss_pred             ccEEEecchhhhhccCCCC
Q 035709           39 ALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~~G   57 (75)
                      .+|++|||++||+++...+
T Consensus         2 ~~v~viG~~~iD~~~~~~g   20 (313)
T 3ewm_A            2 SLIASIGELLIDLISVEEG   20 (313)
T ss_dssp             CEEEEESCCEEEEEESSSS
T ss_pred             CcEEEECceeeeeecCCCC
Confidence            3799999999999997655

>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*

Probab=91.57  E-value=0.057  Score=37.81  Aligned_cols=21  Identities=43%  Similarity=0.706  Sum_probs=17.0

Q ss_pred             CCccEEEecchhhhhccCCCC
Q 035709           37 KKALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP~~~G   57 (75)
                      +.++|+||||++||+++...+
T Consensus         3 ~~~~v~viG~~~iD~~~~~~~   23 (338)
T 3ljs_A            3 LKKTILCFGEALIDMLAQPLV   23 (338)
T ss_dssp             -CCEEEEESCCEEEEEECCCS
T ss_pred             CCCCEEEEChhhhheeccCCC
Confidence            456899999999999987543

>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}

Probab=91.47  E-value=0.074  Score=36.91  Aligned_cols=21  Identities=19%  Similarity=0.294  Sum_probs=17.2

Q ss_pred             CCccEEEecchhhhhccCCCC
Q 035709           37 KKALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP~~~G   57 (75)
                      +..+|+++|+++||+++...+
T Consensus        10 ~~~~i~viG~~~~D~~~~~~~   30 (332)
T 2qcv_A           10 REFDLIAIGRACIDLNAVEYN   30 (332)
T ss_dssp             CSEEEEEESCCEEEEEESSCS
T ss_pred             cCCcEEEECcceEEEecCCCC
Confidence            346899999999999986543

>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}

Probab=90.22  E-value=0.078  Score=36.09  Aligned_cols=18  Identities=39%  Similarity=0.658  Sum_probs=15.2

Q ss_pred             CCccEEEecchhhhhccC
Q 035709           37 KKALVVCFGELLIDFLPT   54 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP~   54 (75)
                      +..+|++|||++||++|.
T Consensus         2 m~~~v~viG~~~~D~~p~   19 (296)
T 2qhp_A            2 MNNIIVGMGEALWDVLPE   19 (296)
T ss_dssp             -CCEEEEESCCEEEEETT
T ss_pred             CcceEEEEchhheEecCC
Confidence            345899999999999985

>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A

Probab=88.82  E-value=0.13  Score=35.35  Aligned_cols=18  Identities=44%  Similarity=0.702  Sum_probs=15.3

Q ss_pred             cEEEecchhhhhccCCCC
Q 035709           40 LVVCFGELLIDFLPTESG   57 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~~G   57 (75)
                      +|++|||++||+++...+
T Consensus         3 ~i~viG~~~~D~~~~~~~   20 (309)
T 1v1a_A            3 EVVTAGEPLVALVPQEPG   20 (309)
T ss_dssp             SEEEESCCEEEEECSSSS
T ss_pred             cEEEEccceEEEecCCCC
Confidence            799999999999985443

>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*

Probab=88.67  E-value=0.13  Score=35.47  Aligned_cols=18  Identities=39%  Similarity=0.591  Sum_probs=15.2

Q ss_pred             cEEEecchhhhhccCCCC
Q 035709           40 LVVCFGELLIDFLPTESG   57 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~~G   57 (75)
                      +|++||+++||+++...+
T Consensus         3 ~v~viG~~~~D~~~~~~~   20 (313)
T 2v78_A            3 DVIALGEPLIQFNSFNPG   20 (313)
T ss_dssp             CEEEECCCEEEEEESSSS
T ss_pred             eEEEECcceEEEecCCCC
Confidence            699999999999985443

>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}

Probab=88.30  E-value=0.15  Score=35.49  Aligned_cols=18  Identities=22%  Similarity=0.307  Sum_probs=15.0

Q ss_pred             CccEEEecchhhhhccCC
Q 035709           38 KALVVCFGELLIDFLPTE   55 (75)
Q Consensus        38 ~~dVlcIGEaLIDFIP~~   55 (75)
                      +.+|++|||++||++...
T Consensus         2 ~~~ilviG~~~iD~~~~~   19 (313)
T 3kd6_A            2 SLSLLVIGSLAFDDIETP   19 (313)
T ss_dssp             -CCEEEESCCEEEEEECS
T ss_pred             CccEEEEeEEEEeeecCC
Confidence            457999999999999754

>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}

Probab=87.76  E-value=0.13  Score=35.62  Aligned_cols=18  Identities=17%  Similarity=0.348  Sum_probs=14.5

Q ss_pred             CccEEEecchhhhhccCC
Q 035709           38 KALVVCFGELLIDFLPTE   55 (75)
Q Consensus        38 ~~dVlcIGEaLIDFIP~~   55 (75)
                      +++|++|||++||+++..
T Consensus         4 ~~~i~viG~~~~D~~~~~   21 (319)
T 3lhx_A            4 SKKIAVIGECMIELSEKG   21 (319)
T ss_dssp             CEEEEEESCCEEEEEC--
T ss_pred             cCceeeechhhhhhccCC
Confidence            458999999999999853

>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*

Probab=87.72  E-value=0.16  Score=35.41  Aligned_cols=17  Identities=24%  Similarity=0.530  Sum_probs=14.5

Q ss_pred             CccEEEecchhhhhccC
Q 035709           38 KALVVCFGELLIDFLPT   54 (75)
Q Consensus        38 ~~dVlcIGEaLIDFIP~   54 (75)
                      .++|+||||++||++..
T Consensus         5 ~~~v~~iG~~~~D~~~~   21 (325)
T 3h49_A            5 NLDVICIGAAIVDIPLQ   21 (325)
T ss_dssp             CEEEEEESCCEEEEEEC
T ss_pred             CCeEEEEChhhheeecc
Confidence            47899999999999643

>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*

Probab=87.58  E-value=0.17  Score=34.82  Aligned_cols=19  Identities=37%  Similarity=0.712  Sum_probs=15.6

Q ss_pred             ccEEEecchhhhhccCCCC
Q 035709           39 ALVVCFGELLIDFLPTESG   57 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~~G   57 (75)
                      .+|++||+++||+++...+
T Consensus         2 ~~v~viG~~~~D~~~~~~~   20 (311)
T 2dcn_A            2 AKLITLGEILIEFNALSPG   20 (311)
T ss_dssp             CEEEEESCCEEEEEESSSS
T ss_pred             CCEEEECCceEEEecCCCC
Confidence            3799999999999985443

>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A

Probab=87.46  E-value=0.14  Score=35.78  Aligned_cols=17  Identities=24%  Similarity=0.640  Sum_probs=14.8

Q ss_pred             ccEEEecchhhhhccCC
Q 035709           39 ALVVCFGELLIDFLPTE   55 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~   55 (75)
                      ++|++|||++||+++..
T Consensus         4 ~~i~viG~~~~D~~~~~   20 (330)
T 3iq0_A            4 SKVFTIGEILVEIMASK   20 (330)
T ss_dssp             CEEEEESCCEEEEEEEE
T ss_pred             CCEEEEcceeEEEeccC
Confidence            47999999999999753

>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*

Probab=85.93  E-value=0.21  Score=35.15  Aligned_cols=18  Identities=17%  Similarity=0.455  Sum_probs=15.9

Q ss_pred             CCccEEEecchhhhhccC
Q 035709           37 KKALVVCFGELLIDFLPT   54 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP~   54 (75)
                      +.++|++|||++||+++.
T Consensus        22 ~m~~i~viG~~~iD~~~~   39 (328)
T 4e69_A           22 SMMHILSIGECMAELAPA   39 (328)
T ss_dssp             SSCEEEEESCCEEEEEEC
T ss_pred             cCCcEEEecCcEEEEecC
Confidence            446899999999999996

>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A

Probab=81.48  E-value=0.41  Score=33.24  Aligned_cols=21  Identities=14%  Similarity=0.493  Sum_probs=14.6

Q ss_pred             CCCCCCccEEEecchhhhhcc
Q 035709           33 QTPDKKALVVCFGELLIDFLP   53 (75)
Q Consensus        33 ~~~~~~~dVlcIGEaLIDFIP   53 (75)
                      +-|.+..+|++|||++||++.
T Consensus        12 ~~~~~~~~i~viG~~~iD~~~   32 (312)
T 2hlz_A           12 GLVPRGSQILCVGLVVLDVIS   32 (312)
T ss_dssp             -----CCEEEEESCCEEEEEE
T ss_pred             CCCCCCCcEEEECcceEEEee
Confidence            345556789999999999985

>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*

Probab=81.32  E-value=0.42  Score=33.47  Aligned_cols=19  Identities=16%  Similarity=0.156  Sum_probs=15.0

Q ss_pred             CCCccEEEecchhhhhccC
Q 035709           36 DKKALVVCFGELLIDFLPT   54 (75)
Q Consensus        36 ~~~~dVlcIGEaLIDFIP~   54 (75)
                      -+.++|++||+++||++..
T Consensus        17 ~mm~~i~viG~~~iD~~~~   35 (310)
T 3go6_A           17 PMAPRVCVVGSVNMDLTFV   35 (310)
T ss_dssp             --CCEEEEECCCEEEEEEE
T ss_pred             cccCCEEEECCceEEEEEe
Confidence            4567899999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	75
d1v19a_	302	c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther	0.004
d2afba1	333	c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase	0.004
d2dcna1	308	c.72.1.1 (A:2-309) Hypothetical fructokinase ST247	0.004

>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

 Score = 31.7 bits (70), Expect = 0.004
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          VV  GE L+  +P E G  L        
Sbjct: 4  VVTAGEPLVALVPQEPG-HLRGKRLLEV 30

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermotoga maritima, TM0067 [TaxId: 2336]

 Score = 32.0 bits (71), Expect = 0.004
 Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          VV FGE+++   P      + +  +F  
Sbjct: 6  VVTFGEIMLRLSP-PDHKRIFQTDSFDV 32

>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical fructokinase ST2478
species: Sulfolobus tokodaii [TaxId: 111955]

 Score = 31.7 bits (70), Expect = 0.004
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 41 VVCFGELLIDFLPTESGVSLAKASAFRK 68
          ++  GE+LI+F     G  L   S F K
Sbjct: 3  LITLGEILIEFNALSPG-PLRHVSYFEK 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d1v19a_	302	2-keto-3-deoxygluconate kinase {Thermus thermophil	96.15
d2afba1	333	2-keto-3-deoxygluconate kinase {Thermotoga maritim	96.01
d2dcna1	308	Hypothetical fructokinase ST2478 {Sulfolobus tokod	95.46
d1tyya_	304	Aminoimidazole riboside kinase {Salmonella typhimu	91.89
d2absa1	350	Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}	88.11
d1bx4a_	342	Adenosine kinase {Human (Homo sapiens) [TaxId: 960	85.27

>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

Probab=96.15  E-value=0.00062  Score=43.96  Aligned_cols=28  Identities=32%  Similarity=0.449  Sum_probs=20.8

Q ss_pred             ccEEEecchhhhhccCCCCCCccchhhhh
Q 035709           39 ALVVCFGELLIDFLPTESGVSLAKASAFR   67 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~~~G~sL~~v~sFe   67 (75)
                      .+|++|||++|||+|..+|. ...+..|.
T Consensus         2 ~~i~viG~~~vD~~~~~~~~-~~~~~~~~   29 (302)
T d1v19a_           2 LEVVTAGEPLVALVPQEPGH-LRGKRLLE   29 (302)
T ss_dssp             CSEEEESCCEEEEEESSSSC-GGGCSEEE
T ss_pred             CeEEEECcceEEEecCCCCc-eeecceEE
Confidence            47999999999999988763 44444443

>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical fructokinase ST2478
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=95.46  E-value=0.0017  Score=41.62  Aligned_cols=29  Identities=34%  Similarity=0.618  Sum_probs=23.2

Q ss_pred             cEEEecchhhhhccCCCCCCccchhhhhhc
Q 035709           40 LVVCFGELLIDFLPTESGVSLAKASAFRKE   69 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~~G~sL~~v~sFek~   69 (75)
                      +|++|||++||+++..++ ++..+..|.++
T Consensus         2 ki~~iG~~~~D~~~~~~~-~~~~~~~~~~~   30 (308)
T d2dcna1           2 KLITLGEILIEFNALSPG-PLRHVSYFEKH   30 (308)
T ss_dssp             EEEEESCCEEEEEESSSS-CGGGCCEEEEE
T ss_pred             EEEEECcceEEEecCCCC-ceeecceeEEe
Confidence            799999999999998877 46666666554

>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Aminoimidazole riboside kinase
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.89  E-value=0.022  Score=35.88  Aligned_cols=17  Identities=24%  Similarity=0.515  Sum_probs=15.3

Q ss_pred             cEEEecchhhhhccCCC
Q 035709           40 LVVCFGELLIDFLPTES   56 (75)
Q Consensus        40 dVlcIGEaLIDFIP~~~   56 (75)
                      +|++||+++||++|...
T Consensus         2 ki~viG~~~~D~i~~~~   18 (304)
T d1tyya_           2 KVWVIGDASVDLVPEKQ   18 (304)
T ss_dssp             CEEEESCCEEEEEECSS
T ss_pred             eEEEECccEEEEecCCC
Confidence            79999999999999754

>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.11  E-value=0.061  Score=35.05  Aligned_cols=16  Identities=19%  Similarity=0.451  Sum_probs=14.0

Q ss_pred             ccEEEecchhhhhccC
Q 035709           39 ALVVCFGELLIDFLPT   54 (75)
Q Consensus        39 ~dVlcIGEaLIDFIP~   54 (75)
                      .+|+|||+++||++..
T Consensus         4 ~kil~iG~~~vD~~~~   19 (350)
T d2absa1           4 MRVFAIGNPILDLVAE   19 (350)
T ss_dssp             CCEEEECCCEEEEEEE
T ss_pred             cEEEEECCceEEEEEE
Confidence            5899999999999753

>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.27  E-value=0.12  Score=33.57  Aligned_cols=17  Identities=18%  Similarity=0.468  Sum_probs=14.6

Q ss_pred             CCccEEEecchhhhhcc
Q 035709           37 KKALVVCFGELLIDFLP   53 (75)
Q Consensus        37 ~~~dVlcIGEaLIDFIP   53 (75)
                      +.+.|+|||+++||.+.
T Consensus         2 ~~~~il~iG~~~vD~~~   18 (342)
T d1bx4a_           2 RENILFGMGNPLLDISA   18 (342)
T ss_dssp             CTTCEEEECCCEEEEEE
T ss_pred             CCCEEEEECcceEEEEE
Confidence            45779999999999875