Citrus Sinensis ID: 035717

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Secondary Structure (PSIPRED)
ccccccEEEccccccHHHHHHHHHHHHccEEEEEcHHcccccccccccccHHHHHHHHHEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEHHHHHHHHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccHHHHHHHHHHHcccccEEEHHHHEccccccccccccHHHHHHHHEEEcEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMIsqynldepkgihNLTRLILKQVRMegflvsdynhlYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Flexible Loop (DISEMBL)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Low Complexity Region (SEG)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Disordered region (IsUnstruct)
****GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNL**********
Disordered Region (DISOPRED)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS*
Disordered Region (DISEMBL)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Disordered Region (DISPRO)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.992	0.362	0.645	2e-45
Q39172	345	NADP-dependent alkenal do	yes	no	1.0	0.362	0.64	4e-44
Q39173	343	NADP-dependent alkenal do	no	no	1.0	0.364	0.624	3e-43
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.984	0.352	0.435	1e-21
P76113	345	NADPH-dependent curcumin	N/A	no	0.984	0.356	0.418	1e-19
O34812	339	Putative NADP-dependent o	yes	no	0.968	0.356	0.379	8e-17
P97584	329	Prostaglandin reductase 1	yes	no	0.936	0.355	0.403	1e-16
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.936	0.355	0.386	4e-16
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.936	0.355	0.403	4e-15
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.936	0.355	0.378	9e-15

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 106/124 (85%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYF+NVGGKML+AV+ NM++ G+IAVCGM+SQY+L +P+G+HNL +LI KQ+RM
Sbjct: 219 FPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRM 278

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           +GF+V DY HLYPKFLEM++P IK  K+ Y+ED +EGLESA +A +G++ GRN+G QV A
Sbjct: 279 QGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVA 338

Query: 122 VASE 125
           V+ E
Sbjct: 339 VSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 8EC: 1

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  176 bits (446), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
           CFP GIDIYFENVGGKMLDAVL+NM + G+IAVCGMISQYNL+  +G+HNL+ +I K++R
Sbjct: 221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIR 280

Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           ++GF+VSD+   Y KFLE ++PHI+  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct: 281 IQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340

Query: 121 AVASE 125
            VA E
Sbjct: 341 VVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  173 bits (438), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 102/125 (81%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
           CFP+GID+YFENVGGKMLDAVL+NM   G+IAVCGMISQYNL+  +G+HNL+ +I K++R
Sbjct: 219 CFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIR 278

Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           ++GF+V+D+   YPKFLE+++P IK  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct: 279 IQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 338

Query: 121 AVASE 125
            +A E
Sbjct: 339 VIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 1/124 (0%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRME 62
           P+GIDIYFENVGG+ +DAVL NM + G+I  CG ISQYN   P  + NL  +++K + ++
Sbjct: 226 PKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQ 285

Query: 63  GFLVSDYNHLY-PKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           GF+V++    Y  ++ E +   I   KI Y  D  +GLESA  A +G+  G+N GK +  
Sbjct: 286 GFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVK 345

Query: 122 VASE 125
           +A E
Sbjct: 346 IADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 6/129 (4%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-PKGIHNLTRLIL----K 57
           P+GIDIY+ENVGGK+ DAVL  +    +I VCG++S YN  E P G   L  L+     K
Sbjct: 216 PKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKK 275

Query: 58  QVRMEGFLVS-DYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLG 116
           ++R++GF+++ DY H   +F   +   +K  KI Y E+  +GLE+A    +GL  G+N G
Sbjct: 276 RIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFG 335

Query: 117 KQVAAVASE 125
           K V  VA +
Sbjct: 336 KVVIRVAGD 344

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD---EPKGIHNLTRLILKQV 59
           P+G+D+YF+NVGG + DAV+  +    +I VCG IS YN +   +  G    ++LI  + 
Sbjct: 213 PDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKS 272

Query: 60  RMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
            M+GF+VSDY+  + +  + +   +K  K+ Y E   EG E+   A +GLF G N GKQ+
Sbjct: 273 LMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQL 332

Query: 120 AAVA 123
             V+
Sbjct: 333 IKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 2/119 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL-KQVRM 61
           P+G D YF+NVGG+  + V++ MK  G+IA+CG ISQYN   P        +I+ +Q+RM
Sbjct: 208 PDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRM 267

Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           EGF+V+ +   +  K L  ++  +   KI Y E   EG E   AA +G+  G NLGK +
Sbjct: 268 EGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTI 326

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 2/119 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL-KQVRM 61
           P+G D YF+NVGG+  +AV++ MK  G+IA+CG ISQYN   P        +++ +Q+RM
Sbjct: 208 PDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAISQYNRTGPCPQGPAPEVVIYQQLRM 267

Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           EGF+V+ +   +  K L  ++  +   K+   E   EG E   AA +G+  G NLGK +
Sbjct: 268 EGFIVNRWQGEVRQKALTELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTI 326

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 2/119 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYN-LDEPKGIHNLTRLILKQVRM 61
           P+G D YF+NVGG+ L+ VL  MK  G+IA+CG IS YN +D+     +   +I KQ+R+
Sbjct: 208 PDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRI 267

Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           EGF+V  +   +  K L  ++  +   KI Y E   +G E+  AA + + +G NLGK V
Sbjct: 268 EGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 326

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL-KQVRM 61
           PEG D YF+NVGG+  +  +  MK  G+IA+CG IS YN   P        +I+ K++ +
Sbjct: 208 PEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHL 267

Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           +GF+V  +   +  K L  ++  +   KI Y E   EG E+  AA +GL  G NLGK +
Sbjct: 268 QGFVVYRWQGEVRQKALRDLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAI 326

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
225434189	345	PREDICTED: NADP-dependent alkenal double	0.992	0.359	0.709	3e-47
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	0.992	0.361	0.725	5e-47
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.992	0.353	0.725	5e-47
147792340	364	hypothetical protein VITISV_043826 [Viti	0.992	0.340	0.701	7e-47
225434191	342	PREDICTED: NADP-dependent alkenal double	0.992	0.362	0.701	1e-46
308943732	347	alcohol dehydrogenase [Camellia sinensis	0.992	0.357	0.733	3e-46
225434197	345	PREDICTED: NADP-dependent alkenal double	0.992	0.359	0.693	1e-45
255577891	345	alcohol dehydrogenase, putative [Ricinus	0.992	0.359	0.685	1e-45
224117858	348	predicted protein [Populus trichocarpa]	0.992	0.356	0.661	2e-45
224117874	348	predicted protein [Populus trichocarpa]	0.992	0.356	0.661	7e-45

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 108/124 (87%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYFENVGGKMLDAVL+NM++ G+IAVCGMISQYNL+EP+G+ NL  ++ K++RM
Sbjct: 222 FPEGIDIYFENVGGKMLDAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRM 281

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV DY HLYPKFL++I+P+I+  KIVY+ED AEGLESA  A +GL+SGRN+GKQV  
Sbjct: 282 EGFLVFDYYHLYPKFLDLIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVV 341

Query: 122 VASE 125
           VA E
Sbjct: 342 VARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  191 bits (485), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 106/124 (85%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP+GIDIYFENVGGKMLDAVL+NMK+ G+IAVCGMISQYNL++ +G+HNL  LI K++RM
Sbjct: 220 FPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRM 279

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV DY HLYPK+LEM+IP IK  K+VY+ED A GLESA  A VGLFSGRN+GKQV  
Sbjct: 280 EGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVM 339

Query: 122 VASE 125
           V+ E
Sbjct: 340 VSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  191 bits (484), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 106/124 (85%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP+GIDIYFENVGGKMLDAVL+NMK+ G+IAVCGMISQYNL++ +G+HNL  LI K++RM
Sbjct: 220 FPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRM 279

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV DY HLYPK+LEM+IP IK  K+VY+ED A GLESA  A VGLFSGRN+GKQV  
Sbjct: 280 EGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVM 339

Query: 122 VASE 125
           V+ E
Sbjct: 340 VSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792340|emb|CAN61472.1| hypothetical protein VITISV_043826 [Vitis vinifera]

 Score =  191 bits (484), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 107/124 (86%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYF+NVGGKMLDAVL+NM++ G+IA CGMISQYNLD+ +G+ NL  +I+KQVRM
Sbjct: 241 FPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMISQYNLDKLEGVCNLINIIIKQVRM 300

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           +GF+++ Y HLYPK+LEM++PHIK  KIVY+EDT EGLESA  A +GLFSGRN+GKQV  
Sbjct: 301 QGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVEGLESAPQALIGLFSGRNVGKQVVV 360

Query: 122 VASE 125
           VA E
Sbjct: 361 VARE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434191|ref|XP_002279426.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|296084343|emb|CBI24731.3| unnamed protein product [Vitis vinifera]

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 107/124 (86%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYF+NVGGKMLDAVL+NM++ G+IA CGMISQYNLD+ +G+ NL  +I+KQVRM
Sbjct: 219 FPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMISQYNLDKLEGVCNLINIIIKQVRM 278

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           +GF+++ Y HLYPK+LEM++PHIK  KIVY+EDT EGLESA  A +GLFSGRN+GKQV  
Sbjct: 279 QGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVEGLESAPQALIGLFSGRNVGKQVVV 338

Query: 122 VASE 125
           VA E
Sbjct: 339 VARE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 104/124 (83%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP GI+IYFENVGGKMLDAVL NM++  +IAVCGMISQYNL+ P+G+HNL  LI K+VRM
Sbjct: 224 FPNGINIYFENVGGKMLDAVLANMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRM 283

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGF+V DY HLYPKFLEMI+P IK  KI Y+ED AEGLESA AA +GLFSGRN+GKQV  
Sbjct: 284 EGFIVFDYYHLYPKFLEMILPCIKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVV 343

Query: 122 VASE 125
           VA E
Sbjct: 344 VARE 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 103/124 (83%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYFENVGG MLDAVL NM++ G+IA CGMISQYNLD+P G++NL  +I KQ++M
Sbjct: 222 FPEGIDIYFENVGGPMLDAVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKM 281

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           +GF+   Y HLYPKFLEMI+PH+K  K+VY+ED AEGLESA  A +GLFSGRN+GKQV  
Sbjct: 282 QGFVAGSYFHLYPKFLEMILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVL 341

Query: 122 VASE 125
           VA E
Sbjct: 342 VARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 106/124 (85%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYFENVGG+MLDAVL+NM+I G+IAVCGMISQYNLD+P+G+HNL+ +I K++RM
Sbjct: 222 FPEGIDIYFENVGGEMLDAVLLNMRIRGRIAVCGMISQYNLDKPEGVHNLSAIIGKRIRM 281

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFL  D+ HLYP  L+M+IP+IK  KIVY+ED AEGLE+A  A +G+F GRN+GKQ+  
Sbjct: 282 EGFLAGDFYHLYPNLLDMVIPYIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVV 341

Query: 122 VASE 125
           VA E
Sbjct: 342 VARE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 109/124 (87%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP+GIDIYFENVGGKMLDAV++NM++ G+I+VCGM+SQYNL++P+G+HNL  L+ K++ M
Sbjct: 225 FPDGIDIYFENVGGKMLDAVVLNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHM 284

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV D+ HL+PK+L+M++P+IK  KIVY+ED AEGLE+A AA  GLF+GRN+GKQV A
Sbjct: 285 EGFLVYDFFHLFPKYLDMVLPYIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVA 344

Query: 122 VASE 125
           V+ E
Sbjct: 345 VSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (466), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 109/124 (87%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP+GIDIYFENVGGK+LDAVL+NM++ G+I+VCGM+SQYNL++P+G+HNL  L+LK++ M
Sbjct: 225 FPDGIDIYFENVGGKILDAVLLNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVLKRIHM 284

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV  + HL+PK+L+M++P+IK  KIVY+ED AEGLE+A AA  GLF+GRN+GKQV A
Sbjct: 285 EGFLVYYFFHLFPKYLDMVLPYIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVA 344

Query: 122 VASE 125
           V+ E
Sbjct: 345 VSRE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.992	0.362	0.645	1.9e-42
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	1.0	0.362	0.64	1.4e-41
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	1.0	0.364	0.624	5.9e-41
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	1.0	0.357	0.624	1.2e-40
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	1.0	0.362	0.616	1.1e-39
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.992	0.353	0.612	1.4e-39
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.984	0.355	0.626	7.8e-39
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	1.0	0.354	0.592	7.8e-39
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	1.0	0.354	0.576	2.4e-37
TAIR|locus:505006405	346	AT3G59845 [Arabidopsis thalian	0.984	0.355	0.593	2.4e-35

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 80/124 (64%), Positives = 106/124 (85%)

Query:     2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
             FPEGIDIYF+NVGGKML+AV+ NM++ G+IAVCGM+SQY+L +P+G+HNL +LI KQ+RM
Sbjct:   219 FPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRM 278

Query:    62 EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
             +GF+V DY HLYPKFLEM++P IK  K+ Y+ED +EGLESA +A +G++ GRN+G QV A
Sbjct:   279 QGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVA 338

Query:   122 VASE 125
             V+ E
Sbjct:   339 VSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFP GIDIYFENVGGKMLDAVL+NM + G+IAVCGMISQYNL+  +G+HNL+ +I K++R
Sbjct:   221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIR 280

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++GF+VSD+   Y KFLE ++PHI+  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct:   281 IQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340

Query:   121 AVASE 125
              VA E
Sbjct:   341 VVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 78/125 (62%), Positives = 102/125 (81%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFP+GID+YFENVGGKMLDAVL+NM   G+IAVCGMISQYNL+  +G+HNL+ +I K++R
Sbjct:   219 CFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIR 278

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++GF+V+D+   YPKFLE+++P IK  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct:   279 IQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 338

Query:   121 AVASE 125
              +A E
Sbjct:   339 VIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 78/125 (62%), Positives = 104/125 (83%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFPEGIDIYFENVGGKMLDAVL+NMK+ G+IAVCGMISQYNL++ +G+HNL  +I K++R
Sbjct:   226 CFPEGIDIYFENVGGKMLDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIR 285

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++GF+VSDY   + KFL+ ++P+I+  KI Y+ED  EGLE+  +A +GLF G+N+GKQ+ 
Sbjct:   286 IKGFVVSDYFDKHLKFLDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLI 345

Query:   121 AVASE 125
             AVA E
Sbjct:   346 AVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 77/125 (61%), Positives = 97/125 (77%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFP GIDIYFENVGGKMLDAVL+NM   G+IAVCGMISQYNL+  +G+HNL+ +I K++R
Sbjct:   221 CFPTGIDIYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIR 280

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++GF V D+   Y KFL+ ++PHIK  KI Y+ED A+GLE    A VGLF G+N+GKQV 
Sbjct:   281 IQGFAVFDFYEKYSKFLDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVV 340

Query:   121 AVASE 125
              +A E
Sbjct:   341 VIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 76/124 (61%), Positives = 101/124 (81%)

Query:     2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
             FPEGIDIYFENVGGKMLDAVLINMK+ G++AVCGMISQYNL +P+G+HNL  ++ K++++
Sbjct:   228 FPEGIDIYFENVGGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQL 287

Query:    62 EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
             +GF V D+   YPKFL+ ++P+I+  KI Y+ED AEG ES  +A +GLF G+N+GKQ+  
Sbjct:   288 QGFGVCDFYDKYPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFV 347

Query:   122 VASE 125
             VA E
Sbjct:   348 VARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 77/123 (62%), Positives = 98/123 (79%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFPEGIDIYFENVGGKMLDAV++NM+  G+IA CGMISQYNL  P+GI+ L+ +  K++R
Sbjct:   222 CFPEGIDIYFENVGGKMLDAVILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIR 281

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             +EGF   DY H Y +FLE ++P+IK  KI Y+ED A+GLESA AA VGLF G+N+GKQ+ 
Sbjct:   282 IEGFNCFDYFHKYSEFLEFVVPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLV 341

Query:   121 AVA 123
              V+
Sbjct:   342 VVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 74/125 (59%), Positives = 99/125 (79%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFPEGIDIYFENVGGKMLDAVL NM+  G+IA CGMISQYNL EP+G+HNL  ++ K++R
Sbjct:   229 CFPEGIDIYFENVGGKMLDAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIR 288

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++GF   ++   Y KFL+ I+P+++  KI Y+ED A+GLE+  +A +GLF G+N+GKQ+ 
Sbjct:   289 VQGFAAVEFFDKYSKFLDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLV 348

Query:   121 AVASE 125
             AVA E
Sbjct:   349 AVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 72/125 (57%), Positives = 96/125 (76%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             CFPEGIDIYFENVGGKMLDAVL NM+  G+IA CGMISQYNL EP+G+HN   ++ K++R
Sbjct:   229 CFPEGIDIYFENVGGKMLDAVLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIR 288

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             ++ F   ++   Y KFL+ I+PH++  KI Y+ED A+GLE+  +A +GLF G+N+GKQ+ 
Sbjct:   289 VQDFAAVEFFDRYSKFLDFILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLV 348

Query:   121 AVASE 125
              VA E
Sbjct:   349 EVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:505006405 AT3G59845 [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/123 (59%), Positives = 93/123 (75%)

Query:     1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
             C P+GIDIYFENVGGKMLDAVL+NMK  G+IAVCGMISQY+L+    + NL  +I K++R
Sbjct:   224 CVPKGIDIYFENVGGKMLDAVLLNMKTYGRIAVCGMISQYHLETRDRLQNLPDIIFKKIR 283

Query:    61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
             M+GF   D+   +PKFLE ++P+IK  K+ Y+ED  EGLE+  AA VGL  G+N+GKQV 
Sbjct:   284 MQGFASYDFIDRFPKFLEFVLPYIKEEKLAYVEDIVEGLENGPAALVGLLHGKNVGKQVL 343

Query:   121 AVA 123
              VA
Sbjct:   344 KVA 346

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034730001 SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_72, whole genome shotgun sequence); (345 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	125
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	3e-63
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	4e-59
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	9e-50
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	6e-38
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	5e-33
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	5e-22
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	6e-19
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-17
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	5e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	9e-04
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	0.002

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  195 bits (498), Expect = 3e-63
 Identities = 76/122 (62%), Positives = 96/122 (78%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
            FP GIDIYF+NVGGKMLDAVL+NM + G+IA CGMISQYNL+ P+G+ NL  +I K+V+
Sbjct: 217 YFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVK 276

Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           ++GFLV DY H YP+FLE +  +IK  K+ Y+ED A+GLESA  A VGLF+G N+GKQV 
Sbjct: 277 IQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVV 336

Query: 121 AV 122
            V
Sbjct: 337 KV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  185 bits (470), Expect = 4e-59
 Identities = 83/124 (66%), Positives = 99/124 (79%)

Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FPEGIDIYF+NVGG MLDA L+NMKI G+IAVCGM+S  +L   +GIHNL  LI K++RM
Sbjct: 225 FPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRM 284

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           +GFL SDY HL+P+FLE +  + K  KIVYIED +EGLESA AA VGLFSG+N+GKQV  
Sbjct: 285 QGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIR 344

Query: 122 VASE 125
           VA E
Sbjct: 345 VAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  160 bits (408), Expect = 9e-50
 Identities = 59/117 (50%), Positives = 81/117 (69%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRME 62
           P+GID+YF+NVGG++LDA L  +  GG+IA+CG ISQYN  EP G  NL  +I K++ M+
Sbjct: 212 PDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQ 271

Query: 63  GFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           GF+VSDY   +P+ L  +   +   K+ Y ED  EGLE+A  A +GLF+G+N GK V
Sbjct: 272 GFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLV 328

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  130 bits (329), Expect = 6e-38
 Identities = 59/123 (47%), Positives = 81/123 (65%), Gaps = 2/123 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPK-GIHNLTRLILKQVRM 61
           P+GID+YFENVGG++LDAVL  + +  +I VCG ISQYN  E   G   L  L+ K++R+
Sbjct: 217 PKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRV 276

Query: 62  EGFLV-SDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           +GF+V SDY+  +P+ L  +   +K  KI Y E   +GLE+A  A +GL SG+N GK V 
Sbjct: 277 QGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVV 336

Query: 121 AVA 123
            VA
Sbjct: 337 KVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  117 bits (295), Expect = 5e-33
 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL-TRLILKQVRM 61
           P+GID YF+NVGG+    VL +M   G++AVCG IS YN  EPK    +   +I KQ++M
Sbjct: 209 PDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKM 268

Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           EGF+V  +   +P+ L+ ++  IK  K+ Y E   EG E+   A +G+  G N GK +
Sbjct: 269 EGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAI 326

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 88.6 bits (220), Expect = 5e-22
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD--EPKGIHNLTRLILKQ 58
             PEG+D+YF+NVGG++ D V+  M     I +CG ISQYN D   P  +   T  ILK+
Sbjct: 220 LCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKE 279

Query: 59  --VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLG 116
             +  E FLV +Y   + + +  +   +K  K+   E   EGLE+A  A   + +G N+G
Sbjct: 280 RNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIG 339

Query: 117 KQVAAV 122
           KQ+  V
Sbjct: 340 KQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 79.7 bits (196), Expect = 6e-19
 Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL-KQVRM 61
           P+G D YF+NVGG+  + V+  MK  G+IA+CG IS YN   P        +++ +++RM
Sbjct: 205 PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRM 264

Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           EGF+V+ +   +  K L+ ++  +   KI Y E   EG E+  AA +G+  G NLGK + 
Sbjct: 265 EGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD---EPKGIHNLT-RLIL 56
            +P+G+D+ +E+VGG+M D  + N+ + G++ V G IS Y       P     L  +L+ 
Sbjct: 203 EYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLA 262

Query: 57  KQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAE--GLESALAARVGLFSGRN 114
           K   + GF +  Y  L P+ L+ ++   +  K+V   D     GLES   A   L+SG+N
Sbjct: 263 KSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKN 322

Query: 115 LGKQV 119
           +GK V
Sbjct: 323 IGKVV 327

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 4   EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRME 62
            G+D+  + VG    L+  L  ++ GG++ V G+     +  P     L  L+LK++ + 
Sbjct: 58  RGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTIL 112

Query: 63  GFLVSDYNHLYPKFLEMII 81
           G L       + + LE++ 
Sbjct: 113 GSLGGGREE-FEEALELLA 130

Length = 131

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 8   IYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVS 67
           I+F+ VGG +   +L+ M  G  + V G +S   LDEP    +   LI K   +EGF ++
Sbjct: 215 IFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG-KLDEPI---DPVDLIFKNKSIEGFWLT 270

Query: 68  DY 69
            +
Sbjct: 271 TW 272

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
            G+D+  E+VG    +  L ++  GG++  CG  + Y   E     +L  +  +Q+ + G
Sbjct: 234 RGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY---EAPI--DLRHVFWRQLSILG 288

Query: 64  -FLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
             + +         L+  +  +   K+  + D+   LE A  A   L S    GK V
Sbjct: 289 STMGTKAE------LDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIV 339

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.85
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.83
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.8
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.77
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	99.77
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	99.75
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.72
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.69
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.68
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.67
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.67
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.66
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.66
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.66
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.65
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.64
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.63
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.63
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.6
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.59
PLN02827	378	Alcohol dehydrogenase-like	99.56
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.56
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.55
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.55
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.54
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.54
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.53
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.53
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.53
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.52
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.51
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.49
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.48
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.47
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.45
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.44
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.44
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.44
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.43
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.43
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.43
PLN02740	381	Alcohol dehydrogenase-like	99.43
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.43
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.42
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.42
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.42
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.41
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.4
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.4
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.4
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.38
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.38
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.37
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.37
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.36
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.36
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.35
PTZ00354	334	alcohol dehydrogenase; Provisional	99.34
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.33
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.33
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.33
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.33
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.31
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.31
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.31
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.31
PRK10083	339	putative oxidoreductase; Provisional	99.3
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.29
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.29
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.28
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.28
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.28
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.28
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.28
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.28
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.27
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.26
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.26
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.26
PLN02702	364	L-idonate 5-dehydrogenase	99.26
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.24
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.24
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.24
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.23
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.23
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.22
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.22
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.22
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.22
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.21
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.2
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.2
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.19
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.19
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.19
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.19
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.18
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.18
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.17
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.17
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.16
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.16
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.16
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.16
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.15
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.14
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.12
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.12
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.12
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.12
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.11
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.11
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.11
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.1
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.09
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.09
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.07
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.07
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.06
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.06
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.03
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.03
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	98.96
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	98.95
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	98.85
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	98.74
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	98.58
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.48
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	98.03
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.4
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.21
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	92.87
PF00044	151	Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase,	92.43
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	89.36
PTZ00434	361	cytosolic glyceraldehyde 3-phosphate dehydrogenase	89.13
PLN03096	395	glyceraldehyde-3-phosphate dehydrogenase A; Provis	86.43
PLN02358	338	glyceraldehyde-3-phosphate dehydrogenase	86.25
TIGR00438	188	rrmJ cell division protein FtsJ.	85.41
TIGR01534	327	GAPDH-I glyceraldehyde-3-phosphate dehydrogenase,	84.99
PRK15425	331	gapA glyceraldehyde-3-phosphate dehydrogenase A; P	84.89
PRK13535	336	erythrose 4-phosphate dehydrogenase; Provisional	84.13
PRK08955	334	glyceraldehyde-3-phosphate dehydrogenase; Validate	83.5
PRK07403	337	glyceraldehyde-3-phosphate dehydrogenase; Reviewed	83.46
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	82.7
PTZ00023	337	glyceraldehyde-3-phosphate dehydrogenase; Provisio	82.49
PRK07729	343	glyceraldehyde-3-phosphate dehydrogenase; Validate	82.37
PLN02237	442	glyceraldehyde-3-phosphate dehydrogenase B	81.36
PF01234	256	NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I	81.29
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	80.21

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.85  E-value=2.2e-20  Score=122.01  Aligned_cols=124  Identities=48%  Similarity=0.794  Sum_probs=108.9

Q ss_pred             CCCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC-CCCcccHHHHHhccceeeeeee-cccccchHHHHH
Q 035717            1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-PKGIHNLTRLILKQVRMEGFLV-SDYNHLYPKFLE   78 (125)
Q Consensus         1 ~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   78 (125)
                      +||.|+|+.||++|++.+++.+..|+.+||++.+|..+.+|..+ +..+..+..++.+++++.|+.+ ..+....++..+
T Consensus       215 a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~  294 (340)
T COG2130         215 ACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALR  294 (340)
T ss_pred             HCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHH
Confidence            58999999999999999999999999999999999999887653 3345566677888999999998 455555668999


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++..|+.+|+|+...+..=.||.+++||..+-++++.||+|+++.+
T Consensus       295 ~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         295 ELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             HHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            9999999999999887777899999999999999999999998764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=123.46  Aligned_cols=123  Identities=67%  Similarity=1.032  Sum_probs=98.1

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|..+......+....+...++.+++++.|++.+.+.....+.++++++
T Consensus       226 ~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~  305 (348)
T PLN03154        226 PEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR  305 (348)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence            45899999999998899999999999999999975432100000112445677889999998765443334567889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ++++|++++.+..+|+|+++++||+.+++++..||+||++.+|
T Consensus       306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            9999999988777799999999999999999999999999775

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.80  E-value=4.8e-19  Score=115.53  Aligned_cols=125  Identities=66%  Similarity=1.161  Sum_probs=113.9

Q ss_pred             CCCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            1 CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         1 ~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++|+|+|+.||.+|+..+++.+..|+.+||++.+|..+.+|.+.+....++...+.|++++.|+.+..+.+..++.++.+
T Consensus       219 ~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l  298 (343)
T KOG1196|consen  219 CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFL  298 (343)
T ss_pred             hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHH
Confidence            57999999999999999999999999999999999999888766654557778889999999999888888889999999


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ..++++|+|+...+..-.|+..++|+.-|.++++.||.++.+..|
T Consensus       299 ~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  299 LPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             HHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            999999999998888789999999999999999999999998755

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.77  E-value=7.1e-19  Score=104.15  Aligned_cols=107  Identities=26%  Similarity=0.237  Sum_probs=71.2

Q ss_pred             CCceeeEEEeCCc--hHHH-HHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc--cchHHH
Q 035717            2 FPEGIDIYFENVG--GKML-DAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN--HLYPKF   76 (125)
Q Consensus         2 ~~~g~Dvv~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   76 (125)
                      .++++|+|||++|  ++.+ ..++++| ++|+++.++. .          ........+...+....+....  ....+.
T Consensus        16 ~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (127)
T PF13602_consen   16 GPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRLKGRSIRYSFLFSVDPNAIRAEA   83 (127)
T ss_dssp             TTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHHHCHHCEEECCC-H--HHHHHHH
T ss_pred             CCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhhcccceEEEEEEecCCCchHHHH
Confidence            3679999999999  7665 7788888 9999999873 1          0111111222333333222111  124566


Q ss_pred             HHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           77 LEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        77 ~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++.+++++|+++|.+..+|+++++.+||+++++++..||+||
T Consensus        84 l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   84 LEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             HHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            99999999999999999988999999999999999999999987

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.77  E-value=4.5e-18  Score=109.10  Aligned_cols=118  Identities=17%  Similarity=0.194  Sum_probs=96.1

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccc---hHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHL---YPKFLEM   79 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   79 (125)
                      ++|||+++|++|.+++..++.||++.|.+|.+|..++     ...++++..+..+++.+..-.+..|.+.   ......+
T Consensus       213 gKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~r  287 (336)
T KOG1197|consen  213 GKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVAR  287 (336)
T ss_pred             CCCceeeeccccchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHH
Confidence            6799999999999999999999999999999998764     2334566667777777655433333221   2234567


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      +..++.+|.+++.+..+|||+++.+|+..+++..+.||+++.+.+|
T Consensus       288 l~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  288 LFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             HHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            8889999999999999999999999999999999999999998765

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=99.75  E-value=2.2e-17  Score=110.75  Aligned_cols=109  Identities=23%  Similarity=0.266  Sum_probs=94.7

Q ss_pred             eeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHHHH
Q 035717            6 IDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHIK   85 (125)
Q Consensus         6 ~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   85 (125)
                      +|+++|+++..+++.++++|+++|+++.+|....    .+....+...++.+++++.|+..++..+     +++++++..
T Consensus       230 ~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~~~d-----~~e~l~f~~  300 (339)
T COG1064         230 ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGTRAD-----LEEALDFAA  300 (339)
T ss_pred             CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCCHHH-----HHHHHHHHH
Confidence            8999999996689999999999999999998631    1222345667889999999999887766     999999999


Q ss_pred             cCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           86 WAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        86 ~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +|+++|.+...++++|+++||++|++++..||+||++.
T Consensus       301 ~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         301 EGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             hCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999998655999999999999999999999999875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.72  E-value=3e-16  Score=106.54  Aligned_cols=120  Identities=63%  Similarity=1.040  Sum_probs=92.8

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|..+...........+...+..+++++.+++...+.....+.++++++
T Consensus       219 ~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  298 (338)
T cd08295         219 PNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSG  298 (338)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHH
Confidence            35899999999998899999999999999999865432110000112334566778888887665544334567889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++....+|+++++.+|++.+++++..||+++++
T Consensus       299 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         299 YIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            9999999987666799999999999999998899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.69  E-value=6.4e-16  Score=104.31  Aligned_cols=120  Identities=43%  Similarity=0.734  Sum_probs=91.9

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCC-CcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPK-GIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|..+..+..... .......+..+++++.+++...+.....+.+++++
T Consensus       209 ~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  288 (329)
T cd08294         209 PDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLL  288 (329)
T ss_pred             CCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHH
Confidence            46899999999998899999999999999999864322111110 12233456678888888765443233456788999


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++....+|+++++++|++.+.+++..||+++++
T Consensus       289 ~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         289 KWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999999987656699999999999999999899999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.68  E-value=1.5e-15  Score=102.65  Aligned_cols=118  Identities=39%  Similarity=0.649  Sum_probs=90.1

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCC-CCcccHHHHHhccceeeeeeecccc-cchHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEP-KGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   80 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|..+..+.... ........+..+++++.+++...+. ....+.++++
T Consensus       205 ~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  284 (325)
T TIGR02825       205 PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKEL  284 (325)
T ss_pred             CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHH
Confidence            4589999999999888999999999999999987542211001 1111233456678888887654332 2235678899


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++++|++++....+|+++++++|++.+++++..||+|+
T Consensus       285 ~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv  324 (325)
T TIGR02825       285 LKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV  324 (325)
T ss_pred             HHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEe
Confidence            9999999999887777999999999999999998999986

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.67  E-value=1.3e-15  Score=103.13  Aligned_cols=114  Identities=26%  Similarity=0.351  Sum_probs=89.8

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (125)
                      +|+|+|||++|++++..++++|+++|+++.+|..++    .+....+...+..+.+.+.|+..... ++...+.++++.+
T Consensus       210 ~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~  285 (326)
T COG0604         210 KGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFD  285 (326)
T ss_pred             CCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHH
Confidence            489999999999999999999999999999998663    11223345667778888888765433 2345677899999


Q ss_pred             HHHcCceeeeeecccchhHH--HHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESA--LAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+++.+..+|+++|.  ..++..+. ++..||+||++
T Consensus       286 ~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~-~~~~GKvvl~~  326 (326)
T COG0604         286 LLASGKLKPVIDRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV  326 (326)
T ss_pred             HHHcCCCcceeccEechhhhHHHHHHHHcc-cCCcceEEEeC
Confidence            99999999999988999995  44455444 58899999974

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.67  E-value=8.2e-16  Score=105.94  Aligned_cols=107  Identities=18%  Similarity=0.154  Sum_probs=87.8

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|+. .+..++++++++|+++.+|....     + ..++...++.+++++.|++.+..     ..+.+++++
T Consensus       242 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-----~-~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l  310 (375)
T PLN02178        242 TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-----P-LDLPIFPLVLGRKMVGGSQIGGM-----KETQEMLEF  310 (375)
T ss_pred             CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-----C-CccCHHHHHhCCeEEEEeCccCH-----HHHHHHHHH
Confidence            689999999976 68999999999999999986431     1 23355567788999999875432     348889999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++|++++.+. +|+|+|+++||+.+++++..||+|+++.
T Consensus       311 ~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gkvvi~~~  349 (375)
T PLN02178        311 CAKHKIVSDIE-LIKMSDINSAMDRLAKSDVRYRFVIDVA  349 (375)
T ss_pred             HHhCCCcccEE-EEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence            99999998764 5999999999999999988899999873

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.66  E-value=1.7e-15  Score=103.68  Aligned_cols=108  Identities=18%  Similarity=0.165  Sum_probs=88.4

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|. ..+..++++++++|+++.+|....      ...++...++.++.++.|++.+..     ..+++++++
T Consensus       244 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~  312 (357)
T PLN02514        244 SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKVITGSFIGSM-----KETEEMLEF  312 (357)
T ss_pred             CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcEEEEEecCCH-----HHHHHHHHH
Confidence            68999999995 578899999999999999997531      123445567788999999876443     248889999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++|++.+.+. +|+++|+.+||+.+++++..||++|.++.
T Consensus       313 ~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        313 CKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             HHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            99999987664 69999999999999999888999998753

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.66  E-value=2e-15  Score=102.00  Aligned_cols=113  Identities=22%  Similarity=0.319  Sum_probs=90.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccccc-chHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNH-LYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   82 (125)
                      +|+|++||++|+......+++++++|+++.+|..+..+    ....+...++.+++++.+++...+.. ...+.++++++
T Consensus       211 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (324)
T cd08291         211 LNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKK  286 (324)
T ss_pred             CCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHH
Confidence            58999999999988888999999999999998754311    11134455678899999988655422 23566888899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++ |.+++.+..+|+++|+.+||+++.+++..||++|.
T Consensus       287 ~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         287 LVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            988 99998888789999999999999999889999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=102.44  Aligned_cols=116  Identities=14%  Similarity=0.091  Sum_probs=87.1

Q ss_pred             ceee-EEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGID-IYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~D-vv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .++| ++|||+|+. .+..++++++++|+++.+|.....   .......+..++.+++++.|++.+.......+.+++++
T Consensus       227 ~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  303 (347)
T PRK10309        227 LRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS  303 (347)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHH
Confidence            4788 999999974 789999999999999999975421   01111122356778999999876432111234588899


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++.+  .+..+|+|+|+++|++.+.+++..||+++.+
T Consensus       304 ~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        304 RLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            9999999863  4555699999999999999988889999975

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.65  E-value=2.4e-15  Score=103.10  Aligned_cols=107  Identities=17%  Similarity=0.130  Sum_probs=85.6

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|.. .++.++++++++|+++.+|....     + ..++...++.++..+.|++.+..     ..+++++++
T Consensus       247 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-----~-~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l  315 (360)
T PLN02586        247 TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-----P-LELPIFPLVLGRKLVGGSDIGGI-----KETQEMLDF  315 (360)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-----C-CccCHHHHHhCCeEEEEcCcCCH-----HHHHHHHHH
Confidence            689999999974 68899999999999999986431     1 12344556667777777765432     348899999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++|++++.+. +|+|+|+++||+.+.+++..||+++.+.
T Consensus       316 i~~g~i~~~~~-~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        316 CAKHNITADIE-LIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             HHhCCCCCcEE-EEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            99999997664 6999999999999999988899999863

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.64  E-value=2.1e-15  Score=101.46  Aligned_cols=107  Identities=16%  Similarity=0.226  Sum_probs=83.5

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+||||+|+. .++.++++++++|+++.+|....     + ..++...++.+++++.+...+.     .+.++++++
T Consensus       199 ~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~  267 (308)
T TIGR01202       199 RDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE-----P-VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRE  267 (308)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC-----C-cccccchhhhcceEEEEecccc-----hhHHHHHHH
Confidence            5799999999985 58999999999999999997431     1 1233445667888888764322     234899999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++|++.+.  +..+|+|+|+++||+.+.+++..+|++|+
T Consensus       268 l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       268 LIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            9999999874  44459999999999998877777899874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.63  E-value=6.3e-15  Score=100.40  Aligned_cols=106  Identities=14%  Similarity=0.106  Sum_probs=85.5

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|+. .+..++++++++|+++.+|....      ...+++..++.+++++.|++...      ..+++++++
T Consensus       235 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~------~~~~~~~~l  302 (343)
T PRK09880        235 YFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRFT------EEFNTAVSW  302 (343)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeecc------ccHHHHHHH
Confidence            599999999974 68899999999999999996431      12345566778899999876421      248899999


Q ss_pred             HHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++|++++.  +..+|+++|+++|++.+.+++..||++|.+
T Consensus       303 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        303 LANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            999999863  445699999999999999887789999874

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.63  E-value=1.1e-14  Score=99.02  Aligned_cols=120  Identities=36%  Similarity=0.586  Sum_probs=84.2

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCC-Cccc--HHHH-HhccceeeeeeecccccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPK-GIHN--LTRL-ILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|..+..+...+. ....  ...+ ..++++..++....+.....+.++
T Consensus       222 ~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (345)
T cd08293         222 PEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA  301 (345)
T ss_pred             CCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence            46899999999998889999999999999999864321110010 0111  1111 123444444433233333456788


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++++|++++....+++++++++|++.+.+++..||+|+++
T Consensus       302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            89999999999987666679999999999999998899999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.60  E-value=1.4e-14  Score=99.67  Aligned_cols=112  Identities=13%  Similarity=0.112  Sum_probs=87.0

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.|+|++||++|. ..+..++++++++|+++.+|.....    ....++...++.+++++.|++.+.+.  ....+++++
T Consensus       257 ~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~  330 (371)
T cd08281         257 GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYL  330 (371)
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHH
Confidence            3479999999986 5788999999999999999875321    11233555678899999998765432  234578889


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++.+|++++.  +..+|+++|+++||+.+++++..+|+|+
T Consensus       331 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         331 ALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             HHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            99999999864  4445999999999999999988877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.59  E-value=9.6e-15  Score=97.31  Aligned_cols=112  Identities=16%  Similarity=0.122  Sum_probs=85.8

Q ss_pred             CCceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            2 FPEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++.|+|++|||+|. ..++++++++.++|+.+.+|.....    .....+..++... .+++|++++....  +..+-++
T Consensus       251 T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~l  323 (366)
T COG1062         251 TDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRL  323 (366)
T ss_pred             cCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHHeecc-ceEEEEeecCCcc--ccchhHH
Confidence            56799999999996 5799999999999999999985421    1122344444444 8899998865421  2247888


Q ss_pred             HHHHHcCceeeeeecc--cchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           81 IPHIKWAKIVYIEDTA--EGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++.+|++......+  ++|+|+++||+.|++++.. |.||.
T Consensus       324 v~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         324 VDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             HHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            9999999999876554  9999999999999998765 55554

>PLN02827 Alcohol dehydrogenase-like

Probab=99.56  E-value=6.8e-14  Score=96.55  Aligned_cols=113  Identities=18%  Similarity=0.175  Sum_probs=86.9

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|++||++|.. .+..++++++++ |+++.+|....    .+... ....++.+++++.|++.+.+.  ....++++
T Consensus       261 ~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~----~~~~~-~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~  333 (378)
T PLN02827        261 GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA----KPEVS-AHYGLFLSGRTLKGSLFGGWK--PKSDLPSL  333 (378)
T ss_pred             CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC----Ccccc-ccHHHHhcCceEEeeecCCCc--hhhhHHHH
Confidence            34799999999975 689999999998 99999997532    11111 113466789999998765442  12347889


Q ss_pred             HHHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           81 IPHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++++|++++  .+..+|+++|+.+|++.+++++. +|+||.+.
T Consensus       334 ~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        334 VDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             HHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            99999999998  45666999999999999998876 69999764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.56  E-value=8.3e-14  Score=94.63  Aligned_cols=107  Identities=21%  Similarity=0.151  Sum_probs=82.9

Q ss_pred             ceeeEEEeCCchHH-HHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKM-LDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+.. +..++++++++|+++.+|....     ... .....++.+++++.|++....     +.++++++
T Consensus       230 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~-~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  298 (339)
T cd08239         230 AGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-----LTI-EVSNDLIRKQRTLIGSWYFSV-----PDMEECAE  298 (339)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----ccc-CcHHHHHhCCCEEEEEecCCH-----HHHHHHHH
Confidence            47999999999764 5789999999999999987432     111 122346678999999875432     24888999


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++  .+..+|+++|+++|++++++++ .||++|.+
T Consensus       299 ~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         299 FLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            999999875  3455599999999999998875 69999863

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.55  E-value=1.2e-13  Score=93.77  Aligned_cols=106  Identities=18%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++++.| +..+..++++++++|+++.+|....    . ...++...++.+++++.+++....     ..+.++++
T Consensus       222 ~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~----~-~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  291 (329)
T TIGR02822       222 EPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT----D-TPPLNYQRHLFYERQIRSVTSNTR-----ADAREFLE  291 (329)
T ss_pred             ccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc----c-CCCCCHHHHhhCCcEEEEeecCCH-----HHHHHHHH
Confidence            46888888776 4578999999999999999997421    1 112344556678888888764322     34788899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++|++++. ..+|+|+|+++||+.+.+++..||+||
T Consensus       292 l~~~g~i~~i-~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       292 LAAQHGVRVT-THTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHhCCCeeE-EEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            9999999864 456999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.55  E-value=1.5e-13  Score=94.14  Aligned_cols=111  Identities=14%  Similarity=0.158  Sum_probs=84.5

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|++||++|+ ..+..++++++++|+++.+|....    ......+...++.+++++.+.+.....  ....++++++
T Consensus       244 ~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~  317 (358)
T TIGR03451       244 FGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP----DMTLELPLLDVFGRGGALKSSWYGDCL--PERDFPMLVD  317 (358)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----CceeeccHHHHhhcCCEEEEeecCCCC--cHHHHHHHHH
Confidence            479999999996 578899999999999999997432    111223445667788999988653221  2345888999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++|++++.  +..+|+++|+.+||+.+++++.. |++|.
T Consensus       318 l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       318 LYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            9999999864  45569999999999999988765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.54  E-value=1.1e-13  Score=94.48  Aligned_cols=108  Identities=18%  Similarity=0.134  Sum_probs=83.0

Q ss_pred             ceee----EEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHH
Q 035717            4 EGID----IYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         4 ~g~D----vv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|+|    ++|||+|+. .++.++++++++|+++.+|....      ...++...++.++.++.|.+.+.     ...+.
T Consensus       236 ~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~  304 (349)
T TIGR03201       236 RGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLMAFHARALGNWGCP-----PDRYP  304 (349)
T ss_pred             CCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHhhcccEEEEEecCC-----HHHHH
Confidence            3665    899999975 57789999999999999997532      11234455666778888876432     23488


Q ss_pred             HHHHHHHcCceeee-eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAKIVYI-EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~i~~~-~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++++|++++. ...+|+|+|+++|++.+.+++..||+++++
T Consensus       305 ~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       305 AALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            99999999999763 223599999999999999998889998863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.54  E-value=7.3e-14  Score=104.84  Aligned_cols=118  Identities=17%  Similarity=0.179  Sum_probs=96.6

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .+|||.|+++...+.++++++||+.+|||..+|-....+     ..+.-+..+.+|.++.|+.+....+-..+.|.++..
T Consensus      1623 GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSq-----NspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~ 1697 (2376)
T KOG1202|consen 1623 GRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQ-----NSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAA 1697 (2376)
T ss_pred             CCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceeccc-----CCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHH
Confidence            469999999999999999999999999999999754221     122345677899999999887776555667778777


Q ss_pred             HHHc----CceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           83 HIKW----AKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        83 l~~~----g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ++++    |.++|....+|+-.++++||+.|.+++..||+|+.+.+|
T Consensus      1698 Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1698 LVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             HHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence            7665    567777777899999999999999999999999998654

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.53  E-value=1.5e-13  Score=95.74  Aligned_cols=111  Identities=14%  Similarity=0.076  Sum_probs=85.1

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|++||++|. ..+..++++++++|+++.++.....   ....+++...+..+++++.|++....     ..++++++
T Consensus       256 ~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  327 (410)
T cd08238         256 QGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLNFYNVHYNNTHYVGTSGGNT-----DDMKEAID  327 (410)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---CccccccHHHhhhcCcEEEEeCCCCH-----HHHHHHHH
Confidence            479999999984 6789999999999998877542210   01123455567788999999764322     34888999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++.+|++++.  +..+|+|+|+++|++.+. ++..||++|.++
T Consensus       328 li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         328 LMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             HHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            9999999984  455699999999999999 677899999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.53  E-value=3.6e-13  Score=90.06  Aligned_cols=114  Identities=19%  Similarity=0.199  Sum_probs=89.0

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHh--ccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL--KQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++|+++|++|+.....++++++++|+++.+|....     .....+...+..  ++.++.+++... .....+.++.+
T Consensus       190 ~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  263 (305)
T cd08270         190 GAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARL  263 (305)
T ss_pred             CCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHH
Confidence            3479999999999888999999999999999986431     111223333333  588888887654 22345678899


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++|++.+.+..+++++++++|++.+.+++..||+++++
T Consensus       264 ~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         264 LGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999999977556699999999999999998889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.53  E-value=9.9e-14  Score=94.55  Aligned_cols=107  Identities=18%  Similarity=0.188  Sum_probs=78.7

Q ss_pred             eeeEEEeCCch----HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            5 GIDIYFENVGG----KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         5 g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+|||++|+    ..+..++++++++|+++.+|....     + ..++...++.+++++.|++.+..     ..++++
T Consensus       222 g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-----~-~~~~~~~~~~k~~~i~g~~~~~~-----~~~~~~  290 (341)
T cd08237         222 AVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-----P-VPINTRMVLEKGLTLVGSSRSTR-----EDFERA  290 (341)
T ss_pred             CCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-----C-cccCHHHHhhCceEEEEecccCH-----HHHHHH
Confidence            68999999995    368899999999999999996431     1 23345567789999999764322     347889


Q ss_pred             HHHHHcC-----ceeeeeecccch---hHHHHHHHHHhcCCCcCeEEEEec
Q 035717           81 IPHIKWA-----KIVYIEDTAEGL---ESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g-----~i~~~~~~~~~l---~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++.+|     .+++.+..+|++   +++.+|++.+.++ ..||+||.++
T Consensus       291 ~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         291 VELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             HHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            9999998     455555556887   4666666666554 6799999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.52  E-value=2.1e-13  Score=91.84  Aligned_cols=113  Identities=19%  Similarity=0.254  Sum_probs=88.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----ccchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----NHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~   78 (125)
                      +|+|++||++|+.....++++++++|+++.+|....     .....+....+.+++++.++.....     +....+.++
T Consensus       207 ~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (324)
T cd08292         207 APISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIA  281 (324)
T ss_pred             CCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHH
Confidence            589999999999888999999999999999986421     1112344445678999998876432     122356788


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++.+|.+.+.....|+++++.+|++.+.++...||++++
T Consensus       282 ~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         282 ELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            9999999999986655569999999999999988888998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.51  E-value=3.5e-13  Score=92.00  Aligned_cols=106  Identities=19%  Similarity=0.209  Sum_probs=84.0

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+..++++++++|+++.+|..+.      ....+...+..+++++.+++.+..     +.++++++
T Consensus       240 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  308 (351)
T cd08233         240 GGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSICYTR-----EDFEEVID  308 (351)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEeccCc-----chHHHHHH
Confidence            369999999985 578999999999999999997541      123455667788999999865432     34899999


Q ss_pred             HHHcCceee--eeecccchhHH-HHHHHHHhcCCCc-CeEEE
Q 035717           83 HIKWAKIVY--IEDTAEGLESA-LAARVGLFSGRNL-GKQVA  120 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvi  120 (125)
                      ++++|++++  .+..+|+++|+ ++||+.+.+++.. ||+||
T Consensus       309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         309 LLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             HHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            999999964  34556999996 7999999988864 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.49  E-value=5.4e-13  Score=90.10  Aligned_cols=118  Identities=50%  Similarity=0.872  Sum_probs=88.7

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|+++|++|+..+..++++++++|+++.+|..............+...++.++.++.++....+.....+.+.++++
T Consensus       212 ~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (329)
T cd05288         212 PDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAK  291 (329)
T ss_pred             cCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHH
Confidence            46799999999998899999999999999999864421110000012344556788888887654433334567888999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++|.+++....+++++++.++++.+.+++..||+++
T Consensus       292 ~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         292 WLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            99999998765556999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.48  E-value=4.2e-13  Score=91.85  Aligned_cols=108  Identities=16%  Similarity=0.088  Sum_probs=79.8

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCccc----HHHHHhccceeeeeeecccccchHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHN----LTRLILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      .++|+|||++|.. .+..++++++++|+++.+|.....    ....++    ...++.+++++.|++.....     .++
T Consensus       237 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-----~~~  307 (355)
T cd08230         237 GEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLVLGNKALVGSVNANKR-----HFE  307 (355)
T ss_pred             CCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHhhcCcEEEEecCCchh-----hHH
Confidence            4799999999974 689999999999999999975431    011112    24567789999998654332     367


Q ss_pred             HHHHHHHcCc------eeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAK------IVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~------i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++.++.      +++.+..+|+++|+++||+.+.++.  +|++|++
T Consensus       308 ~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         308 QAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            7778887766      4555566799999999999987654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.47  E-value=9.9e-13  Score=89.54  Aligned_cols=109  Identities=22%  Similarity=0.313  Sum_probs=87.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +++|++||++|+..+..++++++++|+++.+|....     .....+...++.++.++.++...     ..+.+++++++
T Consensus       242 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l  311 (350)
T cd08274         242 EPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLG-----TREVFRRLVRY  311 (350)
T ss_pred             CCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecC-----CHHHHHHHHHH
Confidence            579999999999889999999999999999986421     11233445556788888887642     23458889999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +.++++++.....|+++++.+|++.+.++...||+++++
T Consensus       312 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         312 IEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            999999876555699999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.45  E-value=1.9e-12  Score=89.70  Aligned_cols=107  Identities=16%  Similarity=0.192  Sum_probs=84.3

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHI   84 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   84 (125)
                      |+|+++|++|+..+..++++++++|+++.+|.....    . ...+...+..++.++.+.+.+.+     +.+.++++++
T Consensus       285 g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~-~~~~~~~l~~~~~~i~g~~~~~~-----~~~~~~~~~~  354 (393)
T cd08246         285 DPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY----N-HTYDNRYLWMRQKRIQGSHFAND-----REAAEANRLV  354 (393)
T ss_pred             CCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC----C-CCCcHHHHhhheeEEEecccCcH-----HHHHHHHHHH
Confidence            799999999988889999999999999999864321    1 12234455667778877755432     3478889999


Q ss_pred             HcCceeeeeecccchhHHHHHHHHHhcC-CCcCeEEEE
Q 035717           85 KWAKIVYIEDTAEGLESALAARVGLFSG-RNLGKQVAA  121 (125)
Q Consensus        85 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~  121 (125)
                      +++.+.+....+|+++++++|++.+.++ +..||+++.
T Consensus       355 ~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         355 MKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            9999987655669999999999999988 788999875

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.44  E-value=4.4e-12  Score=85.38  Aligned_cols=114  Identities=18%  Similarity=0.176  Sum_probs=89.0

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+.....++++++++|+++.+|.....    .. ..+...++.+++++.++...... ....+.++++++
T Consensus       210 ~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08244         210 GGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE----WT-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA  284 (324)
T ss_pred             CCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC----CC-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHH
Confidence            4799999999988889999999999999999874321    11 22334456788888887654322 234567888999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++.+.+.....|+++++.+|++.+.+++..||+++++
T Consensus       285 ~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         285 EAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999876555699999999999999998899999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=6.2e-13  Score=88.10  Aligned_cols=106  Identities=17%  Similarity=0.152  Sum_probs=87.7

Q ss_pred             eEEEeCCc---hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            7 DIYFENVG---GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         7 Dvv~d~~g---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      |.++|++.   ...++.++++++++|++|.+|....      ....+...+..+++++.|+.++...+     .++++++
T Consensus       248 dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~vG~~ke-----t~E~Ldf  316 (360)
T KOG0023|consen  248 DGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIVGSRKE-----TQEALDF  316 (360)
T ss_pred             cCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeeccccHHH-----HHHHHHH
Confidence            44444443   2368899999999999999998652      22345566788899999999887766     8999999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +.+|.+++++.. .+++++++||++|++++..+|.||++..
T Consensus       317 ~a~~~ik~~IE~-v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  317 VARGLIKSPIEL-VKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             HHcCCCcCceEE-EehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            999999998887 6999999999999999999999998753

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.44  E-value=1.4e-12  Score=88.68  Aligned_cols=106  Identities=19%  Similarity=0.146  Sum_probs=85.1

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+. ....++++++++|+++.+|....     . ...+...++.+++++.+++....     +.++++++
T Consensus       231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~  299 (337)
T cd05283         231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE-----P-LPVPPFPLIFGRKSVAGSLIGGR-----KETQEMLD  299 (337)
T ss_pred             CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC-----C-CccCHHHHhcCceEEEEecccCH-----HHHHHHHH
Confidence            5799999999987 48899999999999999987532     1 12344555678899998775432     35888899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++|++.+.. ..|+++++++|++.+++++..||+|++
T Consensus       300 ~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         300 FAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            99999998754 459999999999999999989999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.43  E-value=2.3e-12  Score=88.27  Aligned_cols=109  Identities=18%  Similarity=0.146  Sum_probs=79.4

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|++||++|+ ..+..++++++++|+++.+|.....    .........++.+++++.+++.+...     .++++++
T Consensus       248 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  318 (361)
T cd08231         248 RGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLTIIGVHNYDPS-----HLYRAVR  318 (361)
T ss_pred             CCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccEEEEcccCCch-----hHHHHHH
Confidence            589999999986 5688999999999999999865311    11122333467788999888654322     2666777


Q ss_pred             HHHcC--ce--eeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWA--KI--VYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g--~i--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++.++  .+  ...+..+|+++|+++|++++++++ .+|++|++
T Consensus       319 ~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         319 FLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             HHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence            77776  33  334455699999999999998876 48999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.43  E-value=3.6e-12  Score=88.55  Aligned_cols=110  Identities=20%  Similarity=0.223  Sum_probs=85.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +|+|++|||+|+..+..++++++++|+++.+|.....+     ...+...+..++.++.+......     ..+++++++
T Consensus       279 ~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  348 (398)
T TIGR01751       279 EDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYN-----HDYDNRYLWMRQKRIQGSHFANL-----REAWEANRL  348 (398)
T ss_pred             CCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCC-----CCcCHHHHhhcccEEEccccCcH-----HHHHHHHHH
Confidence            57999999999888999999999999999998754211     12234445556667766654332     236788999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++.+.+.+..++++++++++++.+.+++..||+|+++.
T Consensus       349 l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       349 VAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             HHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            9999998776666999999999999999998999999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.43  E-value=6.1e-12  Score=84.82  Aligned_cols=113  Identities=24%  Similarity=0.303  Sum_probs=85.8

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (125)
                      .++|+++|++|++.+..++++++++|+++.+|....    . ....+...++.+++++.++..... .....+.++.+.+
T Consensus       210 ~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T TIGR02823       210 ERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG----P-DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLAT  284 (323)
T ss_pred             CCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCC----C-CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHH
Confidence            468999999999889999999999999999987532    1 112233445578889888764322 2233456778888


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++..+.+.+.. ..|+++++++|++.+.+++..||+++++
T Consensus       285 ~~~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       285 DLKPRNLESIT-REITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HhhcCCCcCce-eeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            88889887643 3699999999999999999899999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PLN02740 Alcohol dehydrogenase-like

Probab=99.43  E-value=3.8e-12  Score=88.00  Aligned_cols=111  Identities=14%  Similarity=0.137  Sum_probs=82.0

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|+|++||++|+ ..+..++++++++ |+++.+|.....    ....+.... +.+++++.|++.+.+..  ...+.+++
T Consensus       267 ~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~~~~~  339 (381)
T PLN02740        267 GGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPME-LFDGRSITGSVFGDFKG--KSQLPNLA  339 (381)
T ss_pred             CCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHH-HhcCCeEEEEecCCCCc--HHHHHHHH
Confidence            379999999996 5789999999996 999999975321    111222222 34688999887654431  23478899


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++.+|++++.  +..+|+|+|+++|++.+.+++. .|++|.+
T Consensus       340 ~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        340 KQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             HHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            99999998763  4456999999999999988765 5998863

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.43  E-value=4e-12  Score=86.34  Aligned_cols=113  Identities=22%  Similarity=0.242  Sum_probs=88.1

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----ccchHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----NHLYPKFLEM   79 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   79 (125)
                      ++|++||++|+......+++++++|+++.+|.....     ....+...++.+++++.+......     +......+++
T Consensus       221 ~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (341)
T cd08290         221 RPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEE  295 (341)
T ss_pred             CceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHH
Confidence            799999999988888899999999999999864321     112233345778899998875432     2233457889


Q ss_pred             HHHHHHcCceeeeeeccc---chhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIEDTAE---GLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++.+|.+.+....++   +++++.+|++.+.++...||+|+.+
T Consensus       296 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         296 LAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            999999999987655456   9999999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=3.1e-12  Score=84.96  Aligned_cols=108  Identities=19%  Similarity=0.182  Sum_probs=87.1

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      .+|++|||+|.+ +++.++.+++.+|++++.|...      ....++......|++.+.|...+....     +..++++
T Consensus       242 ~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g~fry~~~~-----y~~ai~l  310 (354)
T KOG0024|consen  242 QPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRGSFRYCNGD-----YPTAIEL  310 (354)
T ss_pred             CCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeeeeeeecccc-----HHHHHHH
Confidence            489999999965 7999999999999988887633      234566777888999999987654433     8889999


Q ss_pred             HHcCceeeeeecc--cchhHHHHHHHHHhcCCC-cCeEEEEec
Q 035717           84 IKWAKIVYIEDTA--EGLESALAARVGLFSGRN-LGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~-~gkvvi~~~  123 (125)
                      +++|++.+...++  |+++++.+||+.+..+.. .-|++|..+
T Consensus       311 i~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  311 VSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             HHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            9999999775554  999999999999998763 348888754

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.42  E-value=4.7e-12  Score=85.24  Aligned_cols=113  Identities=16%  Similarity=0.212  Sum_probs=88.0

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----ccchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----NHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~   78 (125)
                      +++|+++|++|+......+++++++|+++.+|.....     ....+...+..+++++.++....+     +....+.++
T Consensus       206 ~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05282         206 AGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFA  280 (323)
T ss_pred             CCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHH
Confidence            5899999999988888899999999999999864321     112233444448899888876543     223456788


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++++|.+.+.....|+++++++|++.+.+++..||++++
T Consensus       281 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         281 EVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            9999999999987655569999999999999988888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.42  E-value=2.6e-12  Score=87.17  Aligned_cols=106  Identities=15%  Similarity=0.141  Sum_probs=83.7

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++|+++|++| ...+..++++++++|+++.+|....      ...++...++.+++++.++..+.     ...++++++
T Consensus       227 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~  295 (333)
T cd08296         227 GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALDSEDTLK  295 (333)
T ss_pred             CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHHHHHHHH
Confidence            36899999986 5678899999999999999987541      11234445668899999976332     234778888


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++++++.+ .+|+++|+.+|++.+.+++..||+|++
T Consensus       296 ~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         296 FSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            88999988764 359999999999999999989999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.41  E-value=3.6e-12  Score=87.26  Aligned_cols=109  Identities=22%  Similarity=0.201  Sum_probs=84.7

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeee-cccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLV-SDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   81 (125)
                      .|+|++|||+|.. .+.+++++++++|+++.+|.....    .. ..+...++.+++++.|.+. .....     +++++
T Consensus       237 ~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~----~~-~~~~~~~~~kel~l~gs~~~~~~~~-----~~~~~  306 (350)
T COG1063         237 RGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE----DI-PLPAGLVVSKELTLRGSLRPSGRED-----FERAL  306 (350)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc----cC-ccCHHHHHhcccEEEeccCCCCccc-----HHHHH
Confidence            4799999999964 589999999999999999986531    10 3455678889999999853 22223     88899


Q ss_pred             HHHHcCceeeeee--cccchhHHHHHHHHHhcCCC-cCeEEEEe
Q 035717           82 PHIKWAKIVYIED--TAEGLESALAARVGLFSGRN-LGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  122 (125)
                      +++.+|++.+...  ..++++|+++||+.+.+.+. .-|+++.+
T Consensus       307 ~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         307 DLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999998643  33789999999999998543 45888753

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.40  E-value=7e-12  Score=84.46  Aligned_cols=113  Identities=22%  Similarity=0.278  Sum_probs=84.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+..+..++++++++|+++.+|.....    +. ......++.+++++.++...... ....+.++.+.+
T Consensus       212 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05280         212 ARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----EL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLAT  286 (325)
T ss_pred             CCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----cc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHH
Confidence            5799999999998899999999999999999874321    11 22333344688888887654432 223456677777


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++..+... .+..+|+++++++|++++.+++..||+++++
T Consensus       287 ~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         287 EWKPDLLE-IVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHhcCCcc-ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            77777433 4555699999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.40  E-value=2.2e-12  Score=87.96  Aligned_cols=120  Identities=20%  Similarity=0.149  Sum_probs=83.2

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeec----ccccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVS----DYNHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   78 (125)
                      ..|||+||||+|+.++..+..+++.+|+...++........... .-.+..+........+.+-.    .+....++.++
T Consensus       223 ~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  301 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKL-DDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLK  301 (347)
T ss_pred             CCCccEEEECCCCCccccchhhhccCCceEEEEecccccccccc-ccchhhhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence            46899999999998888999999999987777654321111000 00000011111111111111    12234567899


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      .+.+++++|++++.+...||++++.+|++++.+++..||+++.+.
T Consensus       302 ~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  302 ALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            999999999999999999999999999999999999999999875

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.40  E-value=7.8e-12  Score=84.36  Aligned_cols=114  Identities=20%  Similarity=0.274  Sum_probs=79.8

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+..+..++++++++|+++.+|....    .. ...+...++.+++++.+++.... .....+.++.+..
T Consensus       212 ~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (326)
T cd08289         212 QRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG----GE-VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT  286 (326)
T ss_pred             CCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCC----CC-CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh
Confidence            579999999999889999999999999999987532    11 12223445578899988754322 1122344455544


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      .+..+.+...+..+|+++++++|++.+.+++..||+++++
T Consensus       287 ~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         287 DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            4432333333455599999999999999998899999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.38  E-value=9.3e-12  Score=85.57  Aligned_cols=109  Identities=18%  Similarity=0.188  Sum_probs=79.9

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+|++||++|+ ..+..++++++++ |+++.+|.....     ....+...+.. ++++.|++.+.+.  ....+.+++
T Consensus       253 ~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~  324 (365)
T cd08277         253 GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLV  324 (365)
T ss_pred             CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHH
Confidence            579999999995 5678999999885 999999875321     11223334443 7888888765542  123478889


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++++..  .+..+|+++|+++|++.+++++ ..|++++
T Consensus       325 ~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         325 SKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             HHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence            9999998764  3455699999999999998877 4688874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.38  E-value=1.2e-11  Score=83.81  Aligned_cols=109  Identities=24%  Similarity=0.293  Sum_probs=84.3

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHI   84 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   84 (125)
                      ++|+++|++|+.....++++++++|+++.+|.....    ..........+.+++++.+.+.     ...+.++++++++
T Consensus       225 ~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  295 (334)
T PRK13771        225 GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHIS-----ATKRDVEEALKLV  295 (334)
T ss_pred             CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecC-----CCHHHHHHHHHHH
Confidence            689999999998889999999999999999874321    1101223334567788877642     1244588999999


Q ss_pred             HcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           85 KWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        85 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++|.+++.....|+++++++|++.+.++...||+++++
T Consensus       296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        296 AEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            99999876556699999999999999888889999875

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.37  E-value=1.5e-11  Score=84.69  Aligned_cols=110  Identities=15%  Similarity=0.110  Sum_probs=81.2

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.++|++||++|+. .+..++++++++ |+++.+|.....    .....+...+ .+++++.|++...+.  ....++++
T Consensus       255 ~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~  327 (369)
T cd08301         255 GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNL  327 (369)
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHH-hcCCeEEEEecCCCC--hHHHHHHH
Confidence            34799999999865 688899999996 999999975421    1112232233 468999998765442  23457889


Q ss_pred             HHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           81 IPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++.+|.+++.  +..+|+|+|+++|++.+.+++. .|++|
T Consensus       328 ~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         328 VEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             HHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence            999999988753  4455999999999999998875 48876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.37  E-value=1.3e-11  Score=84.86  Aligned_cols=110  Identities=19%  Similarity=0.202  Sum_probs=83.7

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+. ....++++++++|+++.+|.....    .....+...++.+++++.+++...    ..+.++++++
T Consensus       255 ~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  326 (367)
T cd08263         255 RGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVG  326 (367)
T ss_pred             CCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHH
Confidence            5799999999987 788999999999999999864321    111234444556778877753211    1356888999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++.+.+.  ....|+++++.+|++.+++++..||+||+
T Consensus       327 ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         327 LAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            9999999874  33459999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.36  E-value=1.7e-11  Score=84.44  Aligned_cols=111  Identities=17%  Similarity=0.177  Sum_probs=78.5

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|+|||++|+ ..+..++++++++ |+++.+|.....    .........+. ++.++.+++.+.+.  ....+.++
T Consensus       254 ~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~  326 (368)
T cd08300         254 DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKL  326 (368)
T ss_pred             CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHH
Confidence            3479999999997 4789999999886 999999875310    11111222222 34566666554332  23457889


Q ss_pred             HHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           81 IPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++|++++.  +..+|+|+|+++||+.+.+++. .|++|+
T Consensus       327 ~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         327 VEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             HHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            999999999864  4556999999999999988764 588863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.36  E-value=1.2e-11  Score=84.37  Aligned_cols=108  Identities=20%  Similarity=0.251  Sum_probs=83.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|. ..+..++++|+++|+++.+|..+..      ...+...+..++.++.+.+....     +.+.++++
T Consensus       242 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~  310 (350)
T cd08240         242 GGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGSL-----EELRELVA  310 (350)
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCCH-----HHHHHHHH
Confidence            379999999984 6789999999999999999865421      11223334457788887765432     45788899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+.+.....|+++++.+|++.+.+++..||+++++
T Consensus       311 ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         311 LAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             HHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            9999998876555699999999999999988889999863

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.35  E-value=9.5e-12  Score=86.39  Aligned_cols=114  Identities=15%  Similarity=0.112  Sum_probs=77.1

Q ss_pred             ceeeEEEeCCchH---------------HHHHHHHhhccCCEEEEEccccccCCCCC-------CCcccHHHHHhcccee
Q 035717            4 EGIDIYFENVGGK---------------MLDAVLINMKIGGQIAVCGMISQYNLDEP-------KGIHNLTRLILKQVRM   61 (125)
Q Consensus         4 ~g~Dvv~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~   61 (125)
                      +|+|++||++|.+               .+++++++++++|+++.+|..........       ...+.......+++++
T Consensus       253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i  332 (393)
T TIGR02819       253 PEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSF  332 (393)
T ss_pred             CCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceE
Confidence            4799999999974               69999999999999999998531100000       0011122233444555


Q ss_pred             eeeeecccccchHHHHHHHHHHHHcCceeee--ee-cccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           62 EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYI--ED-TAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      .+...     ...+.+.++++++++|++++.  +. .+|+|+|+++||+.+.+++ .+|++|++.
T Consensus       333 ~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       333 HTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             EeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence            54211     111234678999999998864  33 4599999999999998874 589999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.34  E-value=5.1e-11  Score=80.52  Aligned_cols=118  Identities=23%  Similarity=0.298  Sum_probs=88.2

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccccc-----chHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNH-----LYPKFL   77 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~   77 (125)
                      .+++|++||++|+..+..++++++++|+++.+|.....    .....+...+..++.++.++.......     ...+.+
T Consensus       208 ~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T PTZ00354        208 EKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE  283 (334)
T ss_pred             CCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence            35899999999998899999999999999999854321    111134445556667888876543221     123556


Q ss_pred             HHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           78 EMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++++++++.+.+.....+++++++++++.+.+++..||+++...+
T Consensus       284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            78889999999987655569999999999999988878999997643

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.33  E-value=3.6e-11  Score=81.22  Aligned_cols=109  Identities=27%  Similarity=0.289  Sum_probs=86.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +++|+++|++|+.....++++++++|+++.+|.....     ........++.+++++.++....     .+.+.+++++
T Consensus       228 ~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l  297 (336)
T cd08276         228 RGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQFEAMNRA  297 (336)
T ss_pred             CCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHHHHHHHHH
Confidence            5899999999988889999999999999999864421     11224455678899999887543     3458888899


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++.+.+.....|++++++++++.+.++...||+++++
T Consensus       298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999988876555699999999999999888889998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.33  E-value=5.1e-11  Score=79.61  Aligned_cols=114  Identities=18%  Similarity=0.163  Sum_probs=85.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc---ccchHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY---NHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   80 (125)
                      +++|+++||+|+.....++++++++|+++.+|.....     ....+...+..+++++.+.....+   +....+.+.++
T Consensus       204 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (320)
T cd05286         204 RGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAEL  278 (320)
T ss_pred             CCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHH
Confidence            5799999999988888999999999999999864321     111223333367777766543222   22345667888


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++.++.+.+.....|+++++++|++++.++...||+++++
T Consensus       279 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         279 FDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999998876555699999999999999988889999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.33  E-value=5e-11  Score=80.59  Aligned_cols=119  Identities=34%  Similarity=0.609  Sum_probs=86.6

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC-CC--C-cccHHHHHhccceeeeeeecccccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-PK--G-IHNLTRLILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ++++|++||++|+.....++++++++|+++.+|......... ..  . .......+.+++++.++....+.....+.+.
T Consensus       205 ~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
T cd08250         205 PKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLD  284 (329)
T ss_pred             CCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHH
Confidence            357999999999988999999999999999998654210000 00  0 0011234667888888765433222456788


Q ss_pred             HHHHHHHcCceeeeee--cccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           79 MIIPHIKWAKIVYIED--TAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++++|.+.+...  .+++++++++|++++.+++..||++++
T Consensus       285 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         285 RLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            8999999999987542  348999999999999988888998863

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.33  E-value=4.1e-11  Score=82.52  Aligned_cols=111  Identities=18%  Similarity=0.143  Sum_probs=77.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|+|++||++|+ ..+..++++++++ |+++.+|.....    .........+. ++..+.+++.+...  ....+.+++
T Consensus       254 ~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~  326 (368)
T TIGR02818       254 GGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQLV-TGRVWRGSAFGGVK--GRTELPGIV  326 (368)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHHh-ccceEEEeeccCCC--cHHHHHHHH
Confidence            479999999996 4688999999886 999999974310    11112222233 34456666543221  123588899


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++.+|++++.  +..+|+|+|+++|++.+++++. .|++|++
T Consensus       327 ~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       327 EQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            99999998753  4556999999999999988754 6998864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.31  E-value=5e-11  Score=81.04  Aligned_cols=109  Identities=16%  Similarity=0.125  Sum_probs=83.9

Q ss_pred             CceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|+++|+.+ +.....++++++++|+++.+|....     .....+...+..++.++.+.....     .+.+++++
T Consensus       232 ~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  301 (341)
T cd08297         232 GGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLVGT-----RQDLQEAL  301 (341)
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEeccCC-----HHHHHHHH
Confidence            357999999665 5678899999999999999986431     111234445567888888754322     34588899


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++.+.+.+ ..|+++++++|++.+.++...||+++++
T Consensus       302 ~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         302 EFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            999999998644 4589999999999999988899999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.31  E-value=5.1e-11  Score=80.67  Aligned_cols=107  Identities=24%  Similarity=0.322  Sum_probs=83.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|. ..+..++++|+++|+++.+|....      ....+...+..++..+.+.+...     .+.++++++
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  299 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGGT-----PEDLPEVLD  299 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccCC-----HHHHHHHHH
Confidence            579999999985 578899999999999999986431      11234455667777777765322     345888999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+.+. ...++++++.++++.+.+++..||+|+++
T Consensus       300 ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         300 LIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999876 34599999999999999999899999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.31  E-value=3.6e-11  Score=81.65  Aligned_cols=106  Identities=22%  Similarity=0.205  Sum_probs=82.3

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++|+++|++|+ .....++++++++|+++.+|....       ...+...++.+++++.+.....     .+.++++++
T Consensus       234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  301 (340)
T cd05284         234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWGT-----RAELVEVVA  301 (340)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEeccc-----HHHHHHHHH
Confidence            479999999996 678899999999999999986431       1122333456788888865432     235788899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+++... .|+++++++|++.+++++..||+++.+
T Consensus       302 ~l~~g~l~~~~~-~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         302 LAESGKVKVEIT-KFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHhCCCCcceE-EEeHHHHHHHHHHHHcCCccceEEecC
Confidence            999999886443 489999999999999998889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.31  E-value=4.9e-11  Score=81.51  Aligned_cols=111  Identities=16%  Similarity=0.119  Sum_probs=78.0

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH--HHHHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL--TRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++|+++|++|+ ..+..++++++++|+++.+|.....    .....+.  .....+..++.+.+....    .+.++++
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~  305 (351)
T cd08285         234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHKTINGGLCPGG----RLRMERL  305 (351)
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccccEEEEeecCCc----cccHHHH
Confidence            579999999996 4789999999999999999875421    1011111  112234455555432221    2348889


Q ss_pred             HHHHHcCceeee---eecccchhHHHHHHHHHhcCC-CcCeEEEEe
Q 035717           81 IPHIKWAKIVYI---EDTAEGLESALAARVGLFSGR-NLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~~---~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  122 (125)
                      ++++++|++++.   ...+|+++++++|++++++++ ..+|++|.+
T Consensus       306 ~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         306 ASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            999999999982   333489999999999999876 468998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10083 putative oxidoreductase; Provisional

Probab=99.30  E-value=7.1e-11  Score=80.23  Aligned_cols=108  Identities=10%  Similarity=0.033  Sum_probs=79.9

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|+ ..+..++++++++|+++.+|....     + ...+......+++++.+...      ..+.+++++++
T Consensus       228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  295 (339)
T PRK10083        228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-----P-SEIVQQGITGKELSIFSSRL------NANKFPVVIDW  295 (339)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-ceecHHHHhhcceEEEEEec------ChhhHHHHHHH
Confidence            45799999995 578999999999999999987431     1 12233344456666665432      23458889999


Q ss_pred             HHcCceeee--eecccchhHHHHHHHHHhcCC-CcCeEEEEecC
Q 035717           84 IKWAKIVYI--EDTAEGLESALAARVGLFSGR-NLGKQVAAVAS  124 (125)
Q Consensus        84 ~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~  124 (125)
                      +++|.+.+.  +..+|+++++++|++.+.++. ..+|+++++.+
T Consensus       296 ~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        296 LSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             HHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            999999873  455699999999999998653 56899998754

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.29  E-value=5.4e-11  Score=80.20  Aligned_cols=104  Identities=15%  Similarity=0.149  Sum_probs=78.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+..++++++++|+++..+....      ....+...+..++.++.+.+...        ++++++
T Consensus       213 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~  278 (319)
T cd08242         213 GGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------FAPALR  278 (319)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------HHHHHH
Confidence            579999999987 468899999999999998765321      12234445566777887765321        778889


Q ss_pred             HHHcCcee--eeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIV--YIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|+++  +.+..+|+++++.+|++.+++++ .+|++|++
T Consensus       279 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         279 LLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            99999994  44455699999999999998766 58999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.29  E-value=4.5e-11  Score=82.81  Aligned_cols=109  Identities=16%  Similarity=0.126  Sum_probs=81.7

Q ss_pred             ceeeEEEeCCchH----------------------HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhcccee
Q 035717            4 EGIDIYFENVGGK----------------------MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM   61 (125)
Q Consensus         4 ~g~Dvv~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (125)
                      +++|++||++|++                      .+..++++++++|+++.+|.....     ....+...++.+++++
T Consensus       253 ~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i  327 (386)
T cd08283         253 RGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT-----VNKFPIGAAMNKGLTL  327 (386)
T ss_pred             CCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC-----cCccCHHHHHhCCcEE
Confidence            3799999999753                      578899999999999999875421     1122333456778888


Q ss_pred             eeeeecccccchHHHHHHHHHHHHcCceeee--eecccchhHHHHHHHHHhcCC-CcCeEEEEe
Q 035717           62 EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYI--EDTAEGLESALAARVGLFSGR-NLGKQVAAV  122 (125)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  122 (125)
                      .+...     ...+.++++++++++|++.+.  ...+|+++++.+|++.+.++. ..+|++|++
T Consensus       328 ~~~~~-----~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         328 RMGQT-----HVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             EeccC-----CchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            77632     124568889999999999864  334599999999999998876 468999853

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.28  E-value=9.9e-11  Score=79.10  Aligned_cols=109  Identities=24%  Similarity=0.358  Sum_probs=84.8

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +++|++++++|+..+...+++++++|+++.+|.....     ....+....+.+++++.+.....     ...+.+++++
T Consensus       234 ~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  303 (342)
T cd08266         234 RGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAELDEALRL  303 (342)
T ss_pred             CCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHHHHHHHH
Confidence            4799999999998889999999999999999864421     11223334466778887765432     2357888999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++.+.+.....|+++++++|++.+.++...||+++++
T Consensus       304 l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         304 VFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999998876556699999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.28  E-value=1.1e-10  Score=78.42  Aligned_cols=111  Identities=18%  Similarity=0.176  Sum_probs=81.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHH--HhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRL--ILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|+++|++|+..+..++++++++|+++.+|......   ..........  ..+++++.++.....   ....+++++
T Consensus       207 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  280 (320)
T cd08243         207 GGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELF  280 (320)
T ss_pred             CCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhhh---hHHHHHHHH
Confidence            57999999999988999999999999999998643211   0001111111  245666666543221   234688899


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++++.+++.....|+++++++|++.+.++...||+++
T Consensus       281 ~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         281 DFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            999999998765556999999999999998888889876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.28  E-value=9.9e-11  Score=79.65  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=83.9

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++||+|. ..+..++++|+++|+++.+|.....   .......+..++.++.++.+++.........+.++++++
T Consensus       226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (343)
T cd08236         226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALD  302 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHH
Confidence            469999999975 5688999999999999999864311   111122344556788999888764332233566888999


Q ss_pred             HHHcCcee--eeeecccchhHHHHHHHHHhc-CCCcCeEEE
Q 035717           83 HIKWAKIV--YIEDTAEGLESALAARVGLFS-GRNLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvi  120 (125)
                      ++++|.+.  +.....+++++++++++.+.+ +...||+|+
T Consensus       303 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         303 LLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            99999986  334455999999999999998 666788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.28  E-value=1.4e-10  Score=78.76  Aligned_cols=107  Identities=20%  Similarity=0.207  Sum_probs=81.0

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+...+++|+++|+++.+|....     . ...+...++.+++++.++..      ..+.++++++
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  297 (339)
T cd08232         230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG-----P-VPLPLNALVAKELDLRGSFR------FDDEFAEAVR  297 (339)
T ss_pred             CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-ccCcHHHHhhcceEEEEEec------CHHHHHHHHH
Confidence            469999999995 578899999999999999986331     1 11233334567777777642      2235788999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+++.  +..+|+++++++|++.+.+++..||+|+++
T Consensus       298 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         298 LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            9999998643  345599999999999999888889999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.28  E-value=5.5e-11  Score=78.05  Aligned_cols=114  Identities=18%  Similarity=0.239  Sum_probs=90.0

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc------cchHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN------HLYPKFLE   78 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~   78 (125)
                      .+-..|||+||.+.....+.|..+|++|-+|+.+.+     +.+.+...++++.+.++|+|+..|.      +...+..+
T Consensus       233 ~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkq-----Pv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~  307 (354)
T KOG0025|consen  233 RPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQ-----PVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMID  307 (354)
T ss_pred             CceEEEeccCchhHHHHHHHHhcCceEEEecCccCC-----CcccccchheeccceeeeeeeeehhhccCCcHHHHHHHH
Confidence            467789999999888889999999999999998742     2344566789999999999997764      22346778


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCC-CcCeEEEEec
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGR-NLGKQVAAVA  123 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~  123 (125)
                      ++.++++.|++..+.....+|++...|++...+.. ..||-+|.+.
T Consensus       308 ~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  308 ELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             HHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            89999999999988777788988888887766543 3367777653

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.28  E-value=6.3e-11  Score=80.55  Aligned_cols=107  Identities=18%  Similarity=0.182  Sum_probs=79.3

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+..++++++++|+++.+|.....   .   .........++.++.++....     .+.+.++++
T Consensus       232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  300 (341)
T cd08262         232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES---D---NIEPALAIRKELTLQFSLGYT-----PEEFADALD  300 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC---C---ccCHHHHhhcceEEEEEeccc-----HHHHHHHHH
Confidence            479999999997 4788899999999999999875321   1   111222245667776543221     235788999


Q ss_pred             HHHcCceeeee--ecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYIE--DTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++|.+.+..  ...|+++++++|++.+.+++..||+|++
T Consensus       301 l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         301 ALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            99999998642  3459999999999999999888999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.27  E-value=2.2e-10  Score=77.36  Aligned_cols=120  Identities=23%  Similarity=0.252  Sum_probs=87.6

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCC-----------CcccHHHHHhccceeeeeeeccc--
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPK-----------GIHNLTRLILKQVRMEGFLVSDY--   69 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--   69 (125)
                      ++++|+++|++|+.....++++++++|+++.+|.....+.....           .......++.+++++.++.....  
T Consensus       204 ~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (337)
T cd08275         204 PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE  283 (337)
T ss_pred             CCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh
Confidence            45799999999998888999999999999999865421110000           01122345677888888754321  


Q ss_pred             -ccchHHHHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           70 -NHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        70 -~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                       .......+.+++++++++.+.+.....|++++++++++.+.++...||+++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         284 ERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             ChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence             11233567889999999998876556699999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.26  E-value=1e-10  Score=79.59  Aligned_cols=108  Identities=18%  Similarity=0.143  Sum_probs=80.4

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+. .+..++++++++|+++.+|.....+    ...........+++.+.+++...     .+.++++++
T Consensus       233 ~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~  303 (343)
T cd08235         233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITITGSYAAS-----PEDYKEALE  303 (343)
T ss_pred             cCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEEEEEecCC-----hhhHHHHHH
Confidence            4699999999964 7889999999999999998643211    11223344556677776654322     235788899


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++.+.+  .+...|+++++.+|++++.+++ .||+|++
T Consensus       304 l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         304 LIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            999999873  3445599999999999999988 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.26  E-value=1.4e-10  Score=78.87  Aligned_cols=109  Identities=19%  Similarity=0.250  Sum_probs=80.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++|||+|+ ..++.++++++++|+++.+|....    .  .......+..+++++.+++....    .+.+.++++
T Consensus       231 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~--~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~  300 (341)
T PRK05396        231 EGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG----D--MAIDWNKVIFKGLTIKGIYGREM----FETWYKMSA  300 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC----C--CcccHHHHhhcceEEEEEEccCc----cchHHHHHH
Confidence            589999999885 568899999999999999986431    1  11234556677888887653222    233667888


Q ss_pred             HHHcC-ceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           83 HIKWA-KIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        83 l~~~g-~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++++ ++.+.+...++++++.+|++.+.+++ .||++++++
T Consensus       301 ~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        301 LLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             HHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            89888 45444555689999999999998876 799998753

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.26  E-value=3e-10  Score=76.77  Aligned_cols=114  Identities=17%  Similarity=0.042  Sum_probs=78.8

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccce-eeeeeecc---cccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR-MEGFLVSD---YNHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~   79 (125)
                      +|+|+++||+|+.....++++++++|+++.+|..+..     ....+...+..++.. ........   ......+.+.+
T Consensus       208 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (327)
T PRK10754        208 KKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE  282 (327)
T ss_pred             CCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHH
Confidence            5799999999998888999999999999999875421     111122222222211 11111111   11223456778


Q ss_pred             HHHHHHcCceeeee--ecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIE--DTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++|.+++..  ..+|+++++++|++.++++...||++|.+
T Consensus       283 ~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        283 LFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            89999999998653  34599999999999999998899999863

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.26  E-value=1.6e-10  Score=79.38  Aligned_cols=107  Identities=21%  Similarity=0.223  Sum_probs=80.6

Q ss_pred             CceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|++||++| ...+..++++++++|+++.+|....     . ..........+++++.+++...      ..+++++
T Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~  319 (364)
T PLN02702        252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVDVVGVFRYR------NTWPLCL  319 (364)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccEEEEeccCh------HHHHHHH
Confidence            357999999999 4678999999999999999986431     1 1223445667888888876422      2478889


Q ss_pred             HHHHcCceee--eeecc--cchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           82 PHIKWAKIVY--IEDTA--EGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~--~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++++++.+  .+..+  ++++++++|++.+.+++..+|+++.
T Consensus       320 ~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        320 EFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            9999999853  23444  4558999999999988888999985

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.24  E-value=1.7e-10  Score=78.49  Aligned_cols=107  Identities=20%  Similarity=0.132  Sum_probs=80.9

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|++||++|+ .....++++++++|+++.+|.....     .........+.+++++.+...     ...+.++++++
T Consensus       234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  303 (344)
T cd08284         234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRC-----PVRSLFPELLP  303 (344)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecC-----CcchhHHHHHH
Confidence            579999999995 5788999999999999999875421     112233445667777765421     23456889999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++.+.+.  ...+|+++++++|++.+.+++. ||+|++
T Consensus       304 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         304 LLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            9999998863  3445899999999999998777 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.24  E-value=1.8e-10  Score=79.21  Aligned_cols=112  Identities=17%  Similarity=0.220  Sum_probs=82.4

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|+++|++|. ..+..++++++++|+++.+|.....    .....+...+..+++++.+++....  ...+.+++++
T Consensus       252 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  325 (365)
T cd08278         252 GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLI  325 (365)
T ss_pred             CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHH
Confidence            4589999999985 5789999999999999999874311    1122344455578888888764332  1245678899


Q ss_pred             HHHHcCceee-eeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           82 PHIKWAKIVY-IEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        82 ~l~~~g~i~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++|++.+ .....|+++++++|++.+++++.. |++|+
T Consensus       326 ~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         326 ELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             HHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            9999999865 233459999999999999887643 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.24  E-value=2.3e-10  Score=77.92  Aligned_cols=109  Identities=19%  Similarity=0.225  Sum_probs=79.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+...+++++++|+++.+|....    ..... ....++.+++++.+++..    ...+.+.++++
T Consensus       229 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~----~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  299 (340)
T TIGR00692       229 EGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPG----KVTID-FTNKVIFKGLTIYGITGR----HMFETWYTVSR  299 (340)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCC----Ccccc-hhhhhhhcceEEEEEecC----CchhhHHHHHH
Confidence            579999999885 568889999999999999987431    11111 122455667777765421    22345788999


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++  .+...++++++.++++.+.+++ .||+++++
T Consensus       300 ~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       300 LIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             HHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence            999999973  3445599999999999999876 49999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.23  E-value=1.7e-10  Score=76.62  Aligned_cols=112  Identities=17%  Similarity=0.169  Sum_probs=84.2

Q ss_pred             CCceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHH
Q 035717            2 FPEGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEM   79 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +-.|+|+.|||+|. +.+.+++.++..+ |+-|.+|....    ........+. +.++.++.|..++.+..  .+.+-.
T Consensus       259 TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----~~~i~~~p~~-l~~GR~~~Gs~FGG~K~--~~~iP~  331 (375)
T KOG0022|consen  259 TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----GQEISTRPFQ-LVTGRTWKGSAFGGFKS--KSDIPK  331 (375)
T ss_pred             hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----Ccccccchhh-hccccEEEEEecccccc--hhhhhH
Confidence            45799999999997 4688999999887 99999998542    1122233333 44578888887776532  234677


Q ss_pred             HHHHHHcCceeeeeecc--cchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           80 IIPHIKWAKIVYIEDTA--EGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++.+.++++.....++  ++++++++||+.|++++.. |-|+.
T Consensus       332 lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  332 LVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             HHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            78888999999876665  8999999999999998866 66664

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.23  E-value=1.5e-10  Score=79.07  Aligned_cols=105  Identities=18%  Similarity=0.123  Sum_probs=78.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHH-HhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRL-ILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|++||++|+ ..+..++++++++|+++.+|....     . ....+..+ ..+++++.+++...      ..+++++
T Consensus       242 ~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~  309 (350)
T cd08256         242 YGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-----P-VTVDWSIIGDRKELDVLGSHLGP------YCYPIAI  309 (350)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-----C-CccChhHhhcccccEEEEeccCc------hhHHHHH
Confidence            479999999995 568889999999999999986431     1 11222222 24567777765432      2478889


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++|.+++.  +..+|+++++++|++.+++++..+|+++
T Consensus       310 ~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         310 DLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            99999999874  4455999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.22  E-value=2.1e-10  Score=78.09  Aligned_cols=109  Identities=20%  Similarity=0.132  Sum_probs=79.5

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+ ..+..++++++++|+++.+|.....    .. .......+.+++++.+.....     .+.++++++
T Consensus       235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  304 (347)
T cd05278         235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP----DP-LPLLGEWFGKNLTFKTGLVPV-----RARMPELLD  304 (347)
T ss_pred             CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC----cc-cCccchhhhceeEEEeeccCc-----hhHHHHHHH
Confidence            579999999997 5789999999999999999854321    10 001112235667766653221     456889999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCC-cCeEEEEe
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRN-LGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  122 (125)
                      ++++|.+.+.  ....|+++++++|++++..++. .+|+++++
T Consensus       305 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         305 LIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             HHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            9999999864  3345899999999999988776 68988763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.22  E-value=2.2e-10  Score=77.35  Aligned_cols=107  Identities=27%  Similarity=0.347  Sum_probs=81.1

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHI   84 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   84 (125)
                      ++|++++++|......++++++++|+++.+|.....    . ..........++.++.+...     ...+.++++++++
T Consensus       226 ~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  295 (332)
T cd08259         226 GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD----P-APLRPGLLILKEIRIIGSIS-----ATKADVEEALKLV  295 (332)
T ss_pred             CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC----C-cCCCHHHHHhCCcEEEEecC-----CCHHHHHHHHHHH
Confidence            689999999988889999999999999999864321    0 11122223346666666532     1245588899999


Q ss_pred             HcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           85 KWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        85 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++|.+.+.....|+++++++|++.+.+++..||++++
T Consensus       296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         296 KEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            9999987666669999999999999998888998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.22  E-value=3.7e-10  Score=75.53  Aligned_cols=112  Identities=24%  Similarity=0.352  Sum_probs=84.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----ccchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----NHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~   78 (125)
                      +++|+++|++|+.....++++++++|+++.+|..+..+     ...+...++.+++++.++.....     .......+.
T Consensus       207 ~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (323)
T cd05276         207 RGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFRE  281 (323)
T ss_pred             CCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHH
Confidence            57999999999888889999999999999998644211     12233444568888888765432     111345677


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++.+++.++.+.+.....|+++++++|++.+.+++..||+++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         282 HVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            888999999998765556999999999999998887888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.22  E-value=2.9e-10  Score=77.50  Aligned_cols=105  Identities=19%  Similarity=0.243  Sum_probs=78.3

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++|||+|+. .++.++++++++|+++.+|....     . ...+......+++.+.+++...      +.++++++
T Consensus       233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  300 (343)
T cd05285         233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----E-VTLPLSAASLREIDIRGVFRYA------NTYPTAIE  300 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-CccCHHHHhhCCcEEEEeccCh------HHHHHHHH
Confidence            4699999999976 78899999999999999986331     1 1223334556677777654322      45788899


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCC-CcCeEEE
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGR-NLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi  120 (125)
                      +++++.+.+  ....+|+++++.+|++++.+++ ..+|++|
T Consensus       301 ~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         301 LLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            999998753  3344599999999999999874 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.21  E-value=2.4e-10  Score=77.86  Aligned_cols=109  Identities=12%  Similarity=0.113  Sum_probs=82.8

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|+ .....++++++++|+++.+|.......   ....+...++.+++++.+.....     ...+++++++
T Consensus       233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l  304 (345)
T cd08260         233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSHGMP-----AHRYDAMLAL  304 (345)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCCcCC-----HHHHHHHHHH
Confidence            79999999984 678899999999999999987542110   01234444557778888765422     3458889999


Q ss_pred             HHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           84 IKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        84 ~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++|.+.+.  +...++++++++|++.+++++..||+|++
T Consensus       305 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         305 IASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            999998864  34458999999999999999889998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.20  E-value=3.5e-10  Score=76.87  Aligned_cols=108  Identities=14%  Similarity=0.122  Sum_probs=81.2

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+ ..+..++++++++|+++.+|....     + .......+..+++++.+..     ....+.++++++
T Consensus       226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  294 (337)
T cd08261         226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG-----P-VTFPDPEFHKKELTILGSR-----NATREDFPDVID  294 (337)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-----C-CccCHHHHHhCCCEEEEec-----cCChhhHHHHHH
Confidence            469999999986 578899999999999999986431     1 1223334455667766542     123456888999


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcC-CCcCeEEEEe
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSG-RNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~  122 (125)
                      ++++|.+++  .....++++++.+|++.+.++ ...+|+|+++
T Consensus       295 l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         295 LLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            999999987  555569999999999999987 4778999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.20  E-value=6e-10  Score=74.71  Aligned_cols=111  Identities=15%  Similarity=0.025  Sum_probs=82.5

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+++||+|+ .....++++++++|+++.+|....    . ....+......++.++.++..... ....+.++++++
T Consensus       197 ~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  270 (312)
T cd08269         197 AGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD----G-PRPVPFQTWNWKGIDLINAVERDP-RIGLEGMREAVK  270 (312)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC----C-CcccCHHHHhhcCCEEEEecccCc-cchhhHHHHHHH
Confidence            579999999985 468899999999999999986431    1 112233445667777777643322 234567899999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCC-cCeEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRN-LGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi  120 (125)
                      ++++|.+.+.  ...+|+++++++|++.+.+++. .+|+++
T Consensus       271 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         271 LIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            9999999863  3455999999999999998854 588876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.19  E-value=3.1e-10  Score=77.27  Aligned_cols=108  Identities=12%  Similarity=0.026  Sum_probs=78.4

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhcc--CCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeec-------ccccc
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKI--GGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVS-------DYNHL   72 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~   72 (125)
                      ++++|+++|++|+ ..+..+++++++  +|+++.+|......            ....+.....+...       ..+..
T Consensus       219 ~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
T cd08249         219 GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREF  286 (339)
T ss_pred             CCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccccccc
Confidence            4679999999998 788999999999  99999998643210            01112222222211       12223


Q ss_pred             hHHHHHHHHHHHHcCceeeeeecccc--hhHHHHHHHHHhcCC-CcCeEEEEe
Q 035717           73 YPKFLEMIIPHIKWAKIVYIEDTAEG--LESALAARVGLFSGR-NLGKQVAAV  122 (125)
Q Consensus        73 ~~~~~~~~~~l~~~g~i~~~~~~~~~--l~~~~~a~~~~~~~~-~~gkvvi~~  122 (125)
                      ....++++.++++++++.+.....++  ++++++|++.+.+++ ..||+|+++
T Consensus       287 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         287 GEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             hHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            34568889999999999986545577  999999999999988 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.19  E-value=8.4e-10  Score=73.90  Aligned_cols=113  Identities=26%  Similarity=0.333  Sum_probs=84.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccccc----chHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNH----LYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (125)
                      +++|+++|++|+.....++++++++|+++.+|....     ............+++++.++....+..    ...+.+++
T Consensus       207 ~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (323)
T cd08241         207 RGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAE  281 (323)
T ss_pred             CCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHH
Confidence            479999999998888899999999999999986431     111112223456788888876543321    23467888


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +++++.++.+.+.....|+++++.++++.+.++...||++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         282 LFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            999999999876655569999999999999988888898864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.19  E-value=9.7e-10  Score=73.72  Aligned_cols=114  Identities=23%  Similarity=0.347  Sum_probs=86.4

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-----cchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-----HLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~   78 (125)
                      +++|+++|++|+.....++++++++|+++.+|.....+    . ..+...++.+++++.++......     ....+.+.
T Consensus       207 ~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T TIGR02824       207 KGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRK----A-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELRE  281 (325)
T ss_pred             CCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCc----C-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHH
Confidence            47999999999888889999999999999998643211    1 22344445789999987654321     11345667


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++++.+.+.....|++++++++++.+.++...||+++++
T Consensus       282 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       282 HVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            78899999998866555599999999999999888889998863

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.19  E-value=7e-11  Score=70.02  Aligned_cols=72  Identities=22%  Similarity=0.405  Sum_probs=57.6

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|+||||+| +..++.++++++++|+++.+|....     .....+...++.+++++.|++.+..     +.++++++
T Consensus        57 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  126 (130)
T PF00107_consen   57 RGVDVVIDCVGSGDTLQEAIKLLRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGSP-----EDFQEALQ  126 (130)
T ss_dssp             SSEEEEEESSSSHHHHHHHHHHEEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGGH-----HHHHHHHH
T ss_pred             ccceEEEEecCcHHHHHHHHHHhccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCCH-----HHHHHHHH
Confidence            48999999999 7789999999999999999998651     2335577888999999999987652     23666666


Q ss_pred             HHH
Q 035717           83 HIK   85 (125)
Q Consensus        83 l~~   85 (125)
                      ++.
T Consensus       127 ~la  129 (130)
T PF00107_consen  127 LLA  129 (130)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.18  E-value=7.3e-10  Score=75.08  Aligned_cols=110  Identities=18%  Similarity=0.084  Sum_probs=82.4

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc---cc----chHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY---NH----LYPK   75 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~   75 (125)
                      +++|+++|++|+ ..+..++++++++|+++.+|...        ...+...+..+++++.+.++...   ..    ...+
T Consensus       216 ~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T cd08252         216 EPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHE  287 (336)
T ss_pred             CCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHH
Confidence            579999999995 67899999999999999998532        11222333467788877654321   11    2346


Q ss_pred             HHHHHHHHHHcCceeeeee---cccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           76 FLEMIIPHIKWAKIVYIED---TAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        76 ~~~~~~~l~~~g~i~~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      .++++++++.+|.+.+...   ..++++++++|++.+.++...||++++
T Consensus       288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         288 ILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            7889999999999997532   237999999999999998888998863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05281 TDH Threonine dehydrogenase

Probab=99.18  E-value=5.1e-10  Score=76.25  Aligned_cols=109  Identities=20%  Similarity=0.196  Sum_probs=78.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+ .....++++|+++|+++.+|....    ..... .......++.++.++....    ..+.+.++++
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  300 (341)
T cd05281         230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG----PVDID-LNNLVIFKGLTVQGITGRK----MFETWYQVSA  300 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC----Ccccc-cchhhhccceEEEEEecCC----cchhHHHHHH
Confidence            589999999986 467899999999999999986432    01011 1112455667776654211    2234778899


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|.+.+  .+...++++++++|++.+.+++ .||+++++
T Consensus       301 ~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         301 LLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             HHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            999999864  3334589999999999999988 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.17  E-value=3.8e-10  Score=77.94  Aligned_cols=114  Identities=18%  Similarity=0.109  Sum_probs=80.2

Q ss_pred             CceeeEEEeCCchH------------HHHHHHHhhccCCEEEEEccccccCCCC-------CCCcccHHHHHhccceeee
Q 035717            3 PEGIDIYFENVGGK------------MLDAVLINMKIGGQIAVCGMISQYNLDE-------PKGIHNLTRLILKQVRMEG   63 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~   63 (125)
                      ++++|+++||+|+.            .+..++++++++|+++.+|.........       ....++...+..++.++.+
T Consensus       241 ~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
T cd08282         241 PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGT  320 (375)
T ss_pred             CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEE
Confidence            35799999999875            3789999999999999888643211000       0011233444555555554


Q ss_pred             eeecccccchHHHHHHHHHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           64 FLVSDYNHLYPKFLEMIIPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ...     ...+.+.+++++++++++++.  +..+|+++++++|++.+.+++ .+|+|+++
T Consensus       321 ~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         321 GQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             ecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            321     123458888999999999874  455699999999999999888 89999853

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.17  E-value=1.3e-09  Score=73.23  Aligned_cols=114  Identities=21%  Similarity=0.368  Sum_probs=85.5

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc---ccchHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY---NHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   80 (125)
                      +++|++++++|+.....++++++++|+++.+|.... +   + ...+....+.+++++.++.+...   +......++.+
T Consensus       212 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (328)
T cd08268         212 KGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSG-E---P-TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFI  286 (328)
T ss_pred             CCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCC-C---C-CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHH
Confidence            479999999999888899999999999999986432 1   1 12233334677888877654321   23345667777


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      .+++.++.+.+.....|+++++.++++.+..+...||++++.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         287 LDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            888888988876555699999999999999888889998763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.16  E-value=1.3e-09  Score=73.28  Aligned_cols=110  Identities=25%  Similarity=0.277  Sum_probs=83.4

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc------cccchHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD------YNHLYPKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~   77 (125)
                      +++|+++|++|+.....++++++++|+++.+|....    .     .......+++++.++....      .+....+.+
T Consensus       210 ~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (326)
T cd08272         210 RGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT----H-----DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEIL  280 (326)
T ss_pred             CCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc----c-----chhhHhhhcceEEEEEcccccccccchhhHHHHH
Confidence            479999999998888889999999999999986420    1     1112235677777765432      112245678


Q ss_pred             HHHHHHHHcCceeeeee-cccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           78 EMIIPHIKWAKIVYIED-TAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      .++++++.++.+.+.+. ..|++++++++++.+.+++..||+++++
T Consensus       281 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         281 REAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            88999999999887644 6699999999999999888789999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.16  E-value=9.8e-10  Score=75.54  Aligned_cols=110  Identities=19%  Similarity=0.221  Sum_probs=80.6

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++| ...+..++++++++|+++.+|....    ......+...+..++.++.++++...  ...+.++++++
T Consensus       250 ~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  323 (363)
T cd08279         250 RGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GETVSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLD  323 (363)
T ss_pred             CCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----CcccccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHH
Confidence            57999999999 4578899999999999999986431    01112344445556777777765322  23456889999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQV  119 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv  119 (125)
                      +++++.+.+.  +..+|+++++.+|++.+.+++..+.++
T Consensus       324 l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         324 LYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            9999999863  344599999999999999877654443

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.16  E-value=1.4e-09  Score=72.84  Aligned_cols=113  Identities=24%  Similarity=0.246  Sum_probs=85.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+......+++++++|+++.+|....    .  .......++.++.++.+...+.. +....+.++++.+
T Consensus       212 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd08253         212 QGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL----R--GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAA  285 (325)
T ss_pred             CceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC----c--CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHH
Confidence            489999999998888889999999999999986431    1  11223334566777777654322 2234566788888


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++.++.+.+.....|++++++++++.+.++...||+++++
T Consensus       286 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         286 GLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            9999998876555699999999999999988889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.16  E-value=7.6e-10  Score=75.16  Aligned_cols=107  Identities=19%  Similarity=0.215  Sum_probs=80.1

Q ss_pred             eee-EEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GID-IYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~D-vv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++| +++++.++..+..++++++++|+++.+|....      ....+...+..++.++.+++.+.     .+.+++++++
T Consensus       230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l  298 (338)
T PRK09422        230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT-----RQDLEEAFQF  298 (338)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-----HHHHHHHHHH
Confidence            578 55666667789999999999999999986431      11224444556677776654322     2458889999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++|.+.+.+. .++++++++|++.+.++...||++++..
T Consensus       299 ~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        299 GAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            99999876544 4899999999999999988999998753

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.15  E-value=8e-10  Score=74.70  Aligned_cols=116  Identities=21%  Similarity=0.217  Sum_probs=79.4

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH----------HHH--Hhccceeeeeeecc--
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL----------TRL--ILKQVRMEGFLVSD--   68 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~--   68 (125)
                      ++++|+++|++|+.....++++++++|+++.+|.....+...  ..+..          ...  ..++.+..+.+...  
T Consensus       201 ~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (331)
T cd08273         201 PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGR--RSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAE  278 (331)
T ss_pred             CCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCcc--ccccchhhhhhhhhhhcceeccceeEEEeechhccc
Confidence            457999999999888899999999999999998754321100  00000          001  11222332322211  


Q ss_pred             cccchHHHHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           69 YNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        69 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      .+....+.++++++++++|.+.+....+++++++++|++.+.+++..||+|+
T Consensus       279 ~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         279 DPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            1122456788999999999998765556999999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.14  E-value=6.8e-10  Score=75.02  Aligned_cols=103  Identities=23%  Similarity=0.200  Sum_probs=75.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +++|+|+|++|+..+..++++++++|+++.+|....    . ....+...+..++.++.+...+.     ++.+.+++++
T Consensus       222 ~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l  291 (325)
T cd08264         222 KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG----G-EVKLDLSDLYSKQISIIGSTGGT-----RKELLELVKI  291 (325)
T ss_pred             CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC----C-CCccCHHHHhhcCcEEEEccCCC-----HHHHHHHHHH
Confidence            579999999998889999999999999999986421    1 12334455566677777764332     2347778888


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeE
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ  118 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  118 (125)
                      +...+  ..+..+|+++++++|++.+.+++..||+
T Consensus       292 ~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         292 AKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            86544  3344569999999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.12  E-value=2e-09  Score=72.91  Aligned_cols=107  Identities=22%  Similarity=0.244  Sum_probs=79.2

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|++||++|. ..+..++++++++|+++.+|.....    .....+...+..+++++.+.+.      ..+.+++++
T Consensus       224 ~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  293 (334)
T cd08234         224 PYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI------NPYTFPRAI  293 (334)
T ss_pred             CCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc------CHHHHHHHH
Confidence            3579999999974 5788999999999999999864320    1112233334456777777642      234588899


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++++++.+.  ....|+++++++|++++.+ ...||+|+
T Consensus       294 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         294 ALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            99999998753  3445999999999999998 77899886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.12  E-value=2.3e-09  Score=71.47  Aligned_cols=103  Identities=25%  Similarity=0.242  Sum_probs=79.6

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +++|+++|++|+.....++++++++|+++.+|....     .  . .  ....++.++....+...    .+.+.+++++
T Consensus       207 ~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~--~-~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~  272 (309)
T cd05289         207 GGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPP-----A--E-Q--AAKRRGVRAGFVFVEPD----GEQLAELAEL  272 (309)
T ss_pred             CCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCc-----c--h-h--hhhhccceEEEEEeccc----HHHHHHHHHH
Confidence            479999999999888999999999999999986431     0  0 1  23345666666544211    5678999999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++.+.+.....|+++++++|++.+.++...||+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         273 VEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            9999988765556999999999999998877788764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.12  E-value=2e-09  Score=73.43  Aligned_cols=107  Identities=20%  Similarity=0.190  Sum_probs=79.4

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++|++||++|+ ..+..++++++++|+++.+|....     . ...+...++.+++++.+....      ...++++++
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  301 (345)
T cd08286         234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-----P-VDLHLEKLWIKNITITTGLVD------TNTTPMLLK  301 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-----C-CCcCHHHHhhcCcEEEeecCc------hhhHHHHHH
Confidence            479999999985 568889999999999999986321     1 223444456788888775332      134788889


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCC--CcCeEEEEe
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGR--NLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~  122 (125)
                      ++++|.+.+.  ...+|+++++++|++.+....  ...|++|++
T Consensus       302 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         302 LVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            9999998753  345599999999999998753  345888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.12  E-value=1.7e-09  Score=74.50  Aligned_cols=110  Identities=16%  Similarity=0.178  Sum_probs=80.4

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhc-cCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMK-IGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++|+++|++|. ..+..++++++ ++|+++.+|.....    ....++...+ .++.++.|.+...+.  ..+.+.++
T Consensus       251 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~-~~~~~l~g~~~~~~~--~~~~~~~~  323 (365)
T cd05279         251 DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATLDPNDL-LTGRTIKGTVFGGWK--SKDSVPKL  323 (365)
T ss_pred             CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----CceeeCHHHH-hcCCeEEEEeccCCc--hHhHHHHH
Confidence            4689999999985 67889999999 99999999864210    1122344444 567788887654432  23457888


Q ss_pred             HHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           81 IPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++++++|.+.+.  ...+|+++++++|++.+++++. .|+++
T Consensus       324 ~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         324 VALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             HHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence            999999998864  4445899999999999987654 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.11  E-value=3.2e-09  Score=71.64  Aligned_cols=114  Identities=20%  Similarity=0.230  Sum_probs=85.5

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   81 (125)
                      +.++|.++|++|+......+.+++.+|+++.+|.....    + .......++.+++++.+++..... ....+.++.+.
T Consensus       210 ~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08288         210 KERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA----D-LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLA  284 (324)
T ss_pred             cCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC----C-CCcchhhhhccccEEEEEEeecccchhhHHHHHHHH
Confidence            34688999999987778888999999999999874210    1 112333444788999987643322 23456788888


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++.++.+.+. ...++++++++|++.+.+++..||+++++
T Consensus       285 ~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         285 RDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            99999988764 44599999999999999999899999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.11  E-value=2.6e-09  Score=72.44  Aligned_cols=109  Identities=13%  Similarity=0.123  Sum_probs=77.2

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc---c--ccch--HH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD---Y--NHLY--PK   75 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~   75 (125)
                      +++|+++|+++ +.....++++++++|+++.++...         ..+...+..+++++.+..+..   +  +...  ..
T Consensus       215 ~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (336)
T TIGR02817       215 EAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHH  285 (336)
T ss_pred             CCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHH
Confidence            57999999985 567889999999999999875311         112223344556666533321   1  1111  25


Q ss_pred             HHHHHHHHHHcCceeeeeeccc---chhHHHHHHHHHhcCCCcCeEEEE
Q 035717           76 FLEMIIPHIKWAKIVYIEDTAE---GLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        76 ~~~~~~~l~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      .++++++++.+|.+++.+...+   +++++++|++.+.+++..||+++.
T Consensus       286 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       286 LLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            6889999999999987544433   579999999999999888998875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08251 polyketide_synthase polyketide synthase

Probab=99.11  E-value=4e-10  Score=74.99  Aligned_cols=112  Identities=13%  Similarity=0.167  Sum_probs=78.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc----cccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD----YNHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   79 (125)
                      +++|+++|++++.....++++++++|+++.+|......    ....... .+.++..+....+..    .+....+.+.+
T Consensus       188 ~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (303)
T cd08251         188 RGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS-VLSNNQSFHSVDLRKLLLLDPEFIADYQAE  262 (303)
T ss_pred             CCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh-HhhcCceEEEEehHHhhhhCHHHHHHHHHH
Confidence            57999999999888889999999999999998643210    0111211 233344433332211    12234567888


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++++|.+++.....|++++++++++.+.+++..||+++
T Consensus       263 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         263 MVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            99999999988765556999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.10  E-value=1.2e-09  Score=73.46  Aligned_cols=116  Identities=15%  Similarity=0.083  Sum_probs=79.1

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc---ccchHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY---NHLYPKFLEM   79 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   79 (125)
                      ++|+|++++++|+.....++++++++|+++.+|.....    ............+++.+.+.+....   .....+.+.+
T Consensus       207 ~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
T cd08271         207 GRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA----SPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEE  282 (325)
T ss_pred             CCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC----cchhHHhhcceEEEEEecccccccchhhHHHHHHHHHH
Confidence            35799999999987777899999999999998753211    0000000111223333333322211   0234566788


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++++.+.+.....|+++++.+|++.+.++...||+++++
T Consensus       283 ~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         283 LLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            8999999999876445599999999999999888889998864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.09  E-value=1.8e-09  Score=71.42  Aligned_cols=111  Identities=18%  Similarity=0.178  Sum_probs=77.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-------cchHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-------HLYPK   75 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~   75 (125)
                      +++|++||++|. .....++++++++|+++.+|.....    .  ......+..++.++.+.......       ....+
T Consensus       158 ~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T cd08255         158 RGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK----P--LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEAR  231 (277)
T ss_pred             CCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC----c--cccHHHHHhccCeEEeecccccccccccccccccc
Confidence            579999999884 5688999999999999999875421    0  11112234455566665433211       11235


Q ss_pred             HHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcC-CCcCeEEE
Q 035717           76 FLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSG-RNLGKQVA  120 (125)
Q Consensus        76 ~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi  120 (125)
                      .++++++++++|.+.+.....|+++++++|++.++++ ....|+++
T Consensus       232 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         232 NLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            6889999999999887655569999999999999876 34456653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.09  E-value=3e-09  Score=73.74  Aligned_cols=106  Identities=19%  Similarity=0.147  Sum_probs=77.2

Q ss_pred             ceeeEEEeCCchH--HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGGK--MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+|+|+|++|+.  .+..++++++++|+++.+|....      ....+...+..+..++.+.+...    ....+.+++
T Consensus       274 ~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~  343 (384)
T cd08265         274 WGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVRRAQIVGAQGHS----GHGIFPSVI  343 (384)
T ss_pred             CCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhCceEEEEeeccC----CcchHHHHH
Confidence            5799999999963  67899999999999999986431      11223344455566777664211    123488899


Q ss_pred             HHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           82 PHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        82 ~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++|.+++.  ...+|+++++.+|++.+.++ ..||+++
T Consensus       344 ~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         344 KLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            99999999864  34459999999999997665 5788886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.07  E-value=2.7e-09  Score=72.71  Aligned_cols=106  Identities=16%  Similarity=0.182  Sum_probs=79.3

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++|+++|++|+ ..+..++++++++|+++.+|....     . ...+....+.+++++.+...     ...+.+.++++
T Consensus       236 ~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  304 (345)
T cd08287         236 VGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-----G-VELDVRELFFRNVGLAGGPA-----PVRRYLPELLD  304 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-----C-CccCHHHHHhcceEEEEecC-----CcHHHHHHHHH
Confidence            479999999985 578999999999999999876431     1 12233345677888876421     22346889999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      ++++|.+++.  +..+++++++++|++.+.+++. .|++|+
T Consensus       305 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         305 DVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             HHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence            9999999863  3445999999999999887654 499885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.07  E-value=1.6e-09  Score=73.87  Aligned_cols=118  Identities=19%  Similarity=0.104  Sum_probs=76.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCC--cccHHHHHhccceeeeee----e-cccccchHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKG--IHNLTRLILKQVRMEGFL----V-SDYNHLYPKF   76 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~   76 (125)
                      +++|++||++|+.....++++++++|+++.+|.....+......  .............+..+.    . ........+.
T Consensus       226 ~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (350)
T cd08248         226 GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSA  305 (350)
T ss_pred             CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHH
Confidence            47999999999988999999999999999998543111000000  000000111111111110    0 0001123567


Q ss_pred             HHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEE
Q 035717           77 LEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA  121 (125)
Q Consensus        77 ~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  121 (125)
                      +.++++++++|.+.+.....|+++++.+|++.+.++...+|++++
T Consensus       306 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         306 LDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            899999999999987655669999999999999988778888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.06  E-value=3.1e-09  Score=71.96  Aligned_cols=106  Identities=21%  Similarity=0.202  Sum_probs=79.8

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|+++ ......++++++++|+++.+|....     .....+...+..++.++.+.....     .+.++++++
T Consensus       224 ~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  293 (330)
T cd08245         224 GGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES-----PPFSPDIFPLIMKRQSIAGSTHGG-----RADLQEALD  293 (330)
T ss_pred             CCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC-----CccccchHHHHhCCCEEEEeccCC-----HHHHHHHHH
Confidence            47999999977 4678899999999999999986431     111112344566777777765432     245788889


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ++.++.+.+.. ..|+++++.+|++.+.+++..||+++
T Consensus       294 ll~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         294 FAAEGKVKPMI-ETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHcCCCcceE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            99999988633 45899999999999999988899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.06  E-value=2.7e-09  Score=72.97  Aligned_cols=120  Identities=18%  Similarity=0.114  Sum_probs=76.9

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhc---cCCEEEEEccccccCCCC-CCC----cccHHHHHhccceeeeeeeccc-ccc
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMK---IGGQIAVCGMISQYNLDE-PKG----IHNLTRLILKQVRMEGFLVSDY-NHL   72 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~   72 (125)
                      .+|+|++|||+|+ .....++++++   ++|+++.++.....+... +..    .......+.++.++..+..... ...
T Consensus       223 ~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (352)
T cd08247         223 QGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDP  302 (352)
T ss_pred             CCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecC
Confidence            3589999999998 57788999999   999999875322100000 000    0000011222332222211100 011


Q ss_pred             hHHHHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           73 YPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        73 ~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ..+.+.++++++.+|.+.+.....++++++++|++.+++++..||+++++
T Consensus       303 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         303 NADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            13568889999999999876556699999999999999988889999863

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>smart00829 PKS_ER Enoylreductase

Probab=99.03  E-value=5.3e-09  Score=68.91  Aligned_cols=112  Identities=16%  Similarity=0.207  Sum_probs=78.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc---cccchHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD---YNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (125)
                      +++|+++|++|+.....++++++++|+++.+|......  .  ....... +.+++++.+..+..   .+......+.++
T Consensus       174 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T smart00829      174 RGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD--N--SQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEV  248 (288)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc--c--cccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHH
Confidence            47999999999888889999999999999998643110  0  1112222 34556665554321   111234557788


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++++++.+.....|++++++++++.+..++..||+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      249 LELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            8999999987654445999999999999998877788764

Enoylreductase in Polyketide synthases.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.03  E-value=3.4e-09  Score=69.88  Aligned_cols=112  Identities=18%  Similarity=0.240  Sum_probs=80.2

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc----ccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY----NHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (125)
                      +++|+++|++|+.....++++++++|+++.+|.....+.  .  .... ..+.+++.+.++.+...    .....+.+.+
T Consensus       178 ~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd05195         178 RGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN--S--KLGM-RPFLRNVSFSSVDLDQLARERPELLRELLRE  252 (293)
T ss_pred             CCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC--C--ccch-hhhccCCeEEEEeHHHHhhhChHHHHHHHHH
Confidence            479999999998889999999999999999986432110  0  1111 12334555555433221    1223456788


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +.+++.++.+.+.....+++++++++++.+..++..||+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         253 VLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            89999999998766666899999999999998888888764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=98.96  E-value=1.7e-09  Score=72.01  Aligned_cols=90  Identities=14%  Similarity=0.275  Sum_probs=64.5

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|++||++|.. .++.++++++++|+++.+|.....    ....++...++.+++++.|++.+.     ...++++++
T Consensus       186 ~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  256 (280)
T TIGR03366       186 RGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVR  256 (280)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHH
Confidence            4799999999864 688999999999999999964311    112345667788999999976432     234888999


Q ss_pred             HHHcC--ceeee--eecccchhHH
Q 035717           83 HIKWA--KIVYI--EDTAEGLESA  102 (125)
Q Consensus        83 l~~~g--~i~~~--~~~~~~l~~~  102 (125)
                      ++.++  ++.+.  +..+|+|+|+
T Consensus       257 ~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       257 FLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHHhhCCCCCHHHHhhcccccccC
Confidence            99875  44432  3334888763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=98.95  E-value=1.2e-08  Score=69.03  Aligned_cols=105  Identities=20%  Similarity=0.127  Sum_probs=75.5

Q ss_pred             ceeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++++.+ +..++.++++++++|+++.+|....     .....+.. .+.++..+.+....     ..+.++++++
T Consensus       224 ~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~-~~~~~~~i~~~~~~-----~~~~~~~~~~  292 (329)
T cd08298         224 EPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYE-LLWGEKTIRSVANL-----TRQDGEEFLK  292 (329)
T ss_pred             CcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchh-hhhCceEEEEecCC-----CHHHHHHHHH
Confidence            47999999765 4578999999999999998874221     11112222 23455555554321     2345788999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++.+.+. ..+|+++++++|++.+.+++..||+++
T Consensus       293 l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         293 LAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            9999998874 345999999999999999888899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.85  E-value=7.7e-08  Score=64.57  Aligned_cols=110  Identities=26%  Similarity=0.185  Sum_probs=71.3

Q ss_pred             ceeeEEEeCCchH--HHHHHHHhhccCCEEEEEccccccCCCCCCCccc-HHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGGK--MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHN-LTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++|+++||+|+.  .....+..++++|+++.+|......   .....+ ..........+.....  ..  ..+.+.++
T Consensus       207 ~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~  279 (319)
T cd08267         207 EKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL---LLVLLLLPLTLGGGGRRLKFFLA--KP--NAEDLEQL  279 (319)
T ss_pred             CCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc---cccccccchhhccccceEEEEEe--cC--CHHHHHHH
Confidence            5799999999953  3334444599999999998743211   000000 0011111122222211  11  15678899


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      +++++++.+.+.....|+++++++|++.+.++...||+++
T Consensus       280 ~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         280 AELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            9999999998766666999999999999998877888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=98.74  E-value=2.7e-07  Score=63.88  Aligned_cols=111  Identities=17%  Similarity=0.171  Sum_probs=73.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhh-ccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINM-KIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|+++|++|+ ..+..++..+ +++|+++.+|.....    ........ .+.++.++.+++...+..  ...+.+++
T Consensus       259 ~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~  331 (373)
T cd08299         259 GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLV  331 (373)
T ss_pred             CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHH
Confidence            579999999996 5677767755 579999999874321    01112222 244677888887655431  22355666


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +.+.++.+++  .+..+|+++++.+|++.+.+++. .|+++++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         332 ADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             HHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            6676766543  34455999999999999987664 5887763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=98.58  E-value=4.5e-07  Score=61.11  Aligned_cols=74  Identities=22%  Similarity=0.326  Sum_probs=57.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|+++|++|+ ..+..++++|+++|+++.+|..+.     .....+...++.+++++.|++++...+     ++++++
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~  301 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSSTPAS-----WETALR  301 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCchHh-----HHHHHH
Confidence            579999999974 578899999999999999988542     112335566778999999998765443     888888


Q ss_pred             HHHcC
Q 035717           83 HIKWA   87 (125)
Q Consensus        83 l~~~g   87 (125)
                      ++++|
T Consensus       302 ~~~~~  306 (306)
T cd08258         302 LLASG  306 (306)
T ss_pred             HHhcC
Confidence            88775

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.48  E-value=1.2e-06  Score=61.35  Aligned_cols=108  Identities=13%  Similarity=0.015  Sum_probs=75.8

Q ss_pred             ceeeEEEeCCchH-HHHHH-HHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHH--H
Q 035717            4 EGIDIYFENVGGK-MLDAV-LINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLE--M   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   79 (125)
                      .++|+||+|+|.. .+... +++++++|+++.+|..        ...++...+..+++++.+...+....    .+.  +
T Consensus       256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~~~----~~~~g~  323 (413)
T cd00401         256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVDRY----ELPDGR  323 (413)
T ss_pred             cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcceE----EcCCcc
Confidence            3689999999965 46655 9999999999999852        12346666777888888876432110    133  6


Q ss_pred             HHHHHHcCce-eee--eecc-----cchh-HHHHHHHHHhcCCC-cCeEEEEec
Q 035717           80 IIPHIKWAKI-VYI--EDTA-----EGLE-SALAARVGLFSGRN-LGKQVAAVA  123 (125)
Q Consensus        80 ~~~l~~~g~i-~~~--~~~~-----~~l~-~~~~a~~~~~~~~~-~gkvvi~~~  123 (125)
                      .+.++.+|++ ...  +...     ++|+ |+.++++.+.+++. .-|+++.+.
T Consensus       324 aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         324 RIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            7899999988 322  2222     7788 99999999987653 346776654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.03  E-value=3e-05  Score=50.79  Aligned_cols=71  Identities=27%  Similarity=0.406  Sum_probs=50.6

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|+++|++|+ .....++++++++|+++.+|......     ........+.+++++.++..+.+..     +++++
T Consensus       199 ~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  268 (271)
T cd05188         199 GGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP-----PLDDLRRLLFKELTIIGSTGGTRED-----FEEAL  268 (271)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC-----CcccHHHHHhcceEEEEeecCCHHH-----HHHHH
Confidence            3579999999998 77889999999999999998754211     1112445677899999987654432     55554


Q ss_pred             HH
Q 035717           82 PH   83 (125)
Q Consensus        82 ~l   83 (125)
                      ++
T Consensus       269 ~~  270 (271)
T cd05188         269 DL  270 (271)
T ss_pred             hh
Confidence            43

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.40  E-value=0.0024  Score=42.54  Aligned_cols=104  Identities=15%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             ceeeEEEeCC------c-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHH
Q 035717            4 EGIDIYFENV------G-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKF   76 (125)
Q Consensus         4 ~g~Dvv~d~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
                      .++|+|+...      . ...+..++++|+|+|+++..+....    ..   .+  ....+...+.+........     
T Consensus       145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~----~~---~~--~~~~~~~~~~~~~~~~~~~-----  210 (272)
T PRK11873        145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR----GE---LP--EEIRNDAELYAGCVAGALQ-----  210 (272)
T ss_pred             CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc----CC---CC--HHHHHhHHHHhccccCCCC-----
Confidence            4689998533      2 2368999999999999998765431    11   11  1122222222111111111     


Q ss_pred             HHHHHHHHHcCceeee---eecccchhHHHHHHHHH--hcCCCcCeEEEE
Q 035717           77 LEMIIPHIKWAKIVYI---EDTAEGLESALAARVGL--FSGRNLGKQVAA  121 (125)
Q Consensus        77 ~~~~~~l~~~g~i~~~---~~~~~~l~~~~~a~~~~--~~~~~~gkvvi~  121 (125)
                      .+++.+++++..+...   ....+++++..++++.+  ..++..++.+..
T Consensus       211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence            3455566666433322   22337889999999998  555545555443

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.21  E-value=0.00073  Score=48.86  Aligned_cols=81  Identities=11%  Similarity=0.031  Sum_probs=52.1

Q ss_pred             ceeeEEEeCCchH------H-HHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHh-ccceeeeeeecccccchHH
Q 035717            4 EGIDIYFENVGGK------M-LDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLIL-KQVRMEGFLVSDYNHLYPK   75 (125)
Q Consensus         4 ~g~Dvv~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   75 (125)
                      +++|+||+|+|.+      . .+++++.++++|+++.+|...+.+.+   ...+...+.. +++++.|.+.  ++   ..
T Consensus       247 ~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n--~P---~~  318 (509)
T PRK09424        247 KEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTD--LP---SR  318 (509)
T ss_pred             CCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCC--Cc---hh
Confidence            4799999999852      3 48999999999999999874322111   1112223344 7888888652  22   12


Q ss_pred             HHHHHHHHHHcCceeee
Q 035717           76 FLEMIIPHIKWAKIVYI   92 (125)
Q Consensus        76 ~~~~~~~l~~~g~i~~~   92 (125)
                      ...+..+++.++.+...
T Consensus       319 ~p~~As~lla~~~i~l~  335 (509)
T PRK09424        319 LPTQSSQLYGTNLVNLL  335 (509)
T ss_pred             HHHHHHHHHHhCCccHH
Confidence            23357778887776643

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=92.87  E-value=0.13  Score=31.41  Aligned_cols=35  Identities=20%  Similarity=0.305  Sum_probs=26.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      .|+|+|+||+|. .+.+.+...++.+.+-|.++..+
T Consensus        86 ~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~  121 (149)
T smart00846       86 LGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA  121 (149)
T ss_pred             cCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence            379999999986 45556667888888888887643

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate

Probab=92.43  E-value=0.099  Score=32.00  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=26.5

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      |+|+|+||+|. .....+..+++.+.+-|.++..+
T Consensus        88 gvDiVvEcTG~f~~~~~~~~hl~~GakkViisap~  122 (151)
T PF00044_consen   88 GVDIVVECTGKFRTRENAEAHLDAGAKKVIISAPS  122 (151)
T ss_dssp             TESEEEETSSSTHSHHHHTHHHHTTESEEEESSS-
T ss_pred             cccEEEeccccceecccccccccccccceeecccc
Confidence            89999999995 45666667888888888887654

The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=89.36  E-value=0.49  Score=32.72  Aligned_cols=34  Identities=12%  Similarity=0.163  Sum_probs=28.2

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +.+.+..+++.|++.|.++..
T Consensus        88 ~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        88 LGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             cCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            4899999999975 467788889988899888764

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PTZ00434 cytosolic glyceraldehyde 3-phosphate dehydrogenase; Provisional

Probab=89.13  E-value=0.36  Score=33.76  Aligned_cols=33  Identities=24%  Similarity=0.156  Sum_probs=25.7

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+|+||+|. .+.+.+...|+.|.+-|.+..+
T Consensus       104 gvD~ViE~TG~f~t~~~a~~Hl~~GAKkViiSAP  137 (361)
T PTZ00434        104 GVDYVIESTGLFTDKLAAEGHLKGGAKKVVISAP  137 (361)
T ss_pred             CCCEEEeCceeeccHHHHhhhhhcCCCEEEECCC
Confidence            89999999994 5667788888888766666443

>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional

Probab=86.43  E-value=1.2  Score=31.72  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=27.5

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +-+.+-..++.|.+.|.+...
T Consensus       149 ~gvDiVie~TG~f~s~~~a~~hl~aGAkkV~iSap  183 (395)
T PLN03096        149 LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP  183 (395)
T ss_pred             cCCCEEEECcchhhhHHHHHHHHHCCCEEEEeCCC
Confidence            4899999999964 466777888888888888764

>PLN02358 glyceraldehyde-3-phosphate dehydrogenase

Probab=86.25  E-value=1.1  Score=31.13  Aligned_cols=35  Identities=26%  Similarity=0.223  Sum_probs=27.4

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEcccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      .|+|+||+|+|.. +.+.+-..++.|.+.|.+...+
T Consensus        94 ~gvDiVie~tG~~~s~~~a~~hl~aGak~ViiSap~  129 (338)
T PLN02358         94 AGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS  129 (338)
T ss_pred             cCCCEEEEcccchhhHHHHHHHHHCCCEEEEeCCCC
Confidence            4899999999975 4667777888888888876543

>TIGR00438 rrmJ cell division protein FtsJ

Probab=85.41  E-value=2  Score=26.92  Aligned_cols=19  Identities=26%  Similarity=0.148  Sum_probs=16.0

Q ss_pred             HHHHHHHhhccCCEEEEEc
Q 035717           17 MLDAVLINMKIGGQIAVCG   35 (125)
Q Consensus        17 ~~~~~~~~l~~~G~~v~~g   35 (125)
                      .+..+.++|+++|+++...
T Consensus       128 ~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       128 ALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             HHHHHHHHccCCCEEEEEE
Confidence            5678899999999998864

>TIGR01534 GAPDH-I glyceraldehyde-3-phosphate dehydrogenase, type I

Probab=84.99  E-value=1.6  Score=30.34  Aligned_cols=33  Identities=18%  Similarity=0.232  Sum_probs=26.7

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+||+|+|.. +-+.+...++.|.+.|.+...
T Consensus        90 gvDiVle~tG~~~s~~~a~~hl~~Gak~V~iSap  123 (327)
T TIGR01534        90 GVDIVIECTGKFRDKEKLEGHLEAGAKKVLISAP  123 (327)
T ss_pred             CCCEEEEccchhhcHHHHHHHhhCCCEEEEeCCC
Confidence            899999999975 456677788888888888754

The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model.

>PRK15425 gapA glyceraldehyde-3-phosphate dehydrogenase A; Provisional

Probab=84.89  E-value=1.4  Score=30.55  Aligned_cols=33  Identities=18%  Similarity=0.161  Sum_probs=26.6

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+||+|+|.. +-+.+-..++.|.+.|.+...
T Consensus        89 gvDiVle~tG~f~s~~~a~~hl~aGak~V~iSap  122 (331)
T PRK15425         89 GVDVVAEATGLFLTDETARKHITAGAKKVVMTGP  122 (331)
T ss_pred             CCCEEEEecchhhcHHHHHHHHHCCCEEEEeCCC
Confidence            899999999975 456677788888888888654

>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional

Probab=84.13  E-value=1.8  Score=30.13  Aligned_cols=34  Identities=12%  Similarity=0.161  Sum_probs=26.5

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +-+.+-..++.|.+.|.+...
T Consensus        90 ~gvDiVle~tG~~~s~~~a~~~l~aGAk~V~iSap  124 (336)
T PRK13535         90 LGVDVVLDCTGVYGSREDGEAHIAAGAKKVLFSHP  124 (336)
T ss_pred             cCCCEEEEccchhhhHHHHHHHHHcCCEEEEecCC
Confidence            4899999999975 455666788888788887654

>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated

Probab=83.50  E-value=1.7  Score=30.26  Aligned_cols=33  Identities=18%  Similarity=0.145  Sum_probs=26.4

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+||+|+|.. +.+.+-..+..|.+.|.+...
T Consensus        88 gvDiVle~tG~~~s~~~a~~hl~aGak~V~iSap  121 (334)
T PRK08955         88 GCDVVIEASGVMKTKALLQAYLDQGVKRVVVTAP  121 (334)
T ss_pred             CCCEEEEccchhhcHHHHHHHHHCCCEEEEECCC
Confidence            899999999975 456677788888888888654

>PRK07403 glyceraldehyde-3-phosphate dehydrogenase; Reviewed

Probab=83.46  E-value=1.8  Score=30.15  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=26.0

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+||+|+|.. +.+.+-..++.|.+.|.+...
T Consensus        90 gvDiV~e~tG~f~s~~~a~~hl~aGak~V~iSap  123 (337)
T PRK07403         90 GIDLIIESTGVFVTKEGASKHIQAGAKKVLITAP  123 (337)
T ss_pred             CCCEEEeccchhhhHHHHHHHhhCCcEEEEeCCC
Confidence            899999999964 455667788888888888654

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=82.70  E-value=2.8  Score=26.57  Aligned_cols=30  Identities=30%  Similarity=0.459  Sum_probs=21.8

Q ss_pred             ceeeEEEeCCch----HHHHHHHHhhccCCEEEE
Q 035717            4 EGIDIYFENVGG----KMLDAVLINMKIGGQIAV   33 (125)
Q Consensus         4 ~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~   33 (125)
                      ..+|.||...+.    ..+..+.++|+++|+++.
T Consensus       110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            458888875442    257778888999999875

>PTZ00023 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=82.49  E-value=1.7  Score=30.26  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=26.3

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +-+.+-..++.|.+.|.+...
T Consensus        89 ~gvDiVle~tG~~~s~~~a~~~l~aGak~V~iSap  123 (337)
T PTZ00023         89 NGVDVVCESTGVFLTKEKAQAHLKGGAKKVIMSAP  123 (337)
T ss_pred             cCCCEEEEecchhcCHHHHHHHhhCCCEEEEeCCC
Confidence            4899999999975 455666788888888888653

>PRK07729 glyceraldehyde-3-phosphate dehydrogenase; Validated

Probab=82.37  E-value=2.1  Score=29.92  Aligned_cols=34  Identities=21%  Similarity=0.329  Sum_probs=26.2

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +.+.+-..++.|.+.|.+...
T Consensus        88 ~gvDiVle~tG~f~s~~~a~~hl~aGak~V~iSap  122 (343)
T PRK07729         88 LGIDIVIEATGKFNSKEKAILHVEAGAKKVILTAP  122 (343)
T ss_pred             cCCCEEEEccchhhhHhHHHHHHHcCCeEEEeCCC
Confidence            4899999999965 456666778878888888654

>PLN02237 glyceraldehyde-3-phosphate dehydrogenase B

Probab=81.36  E-value=2.6  Score=30.47  Aligned_cols=34  Identities=21%  Similarity=0.149  Sum_probs=27.1

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+||+|+|.. +.+.+-..++.|.+.|.+...
T Consensus       164 ~gVDiViE~TG~f~s~e~a~~hl~aGAkkV~iSAP  198 (442)
T PLN02237        164 LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP  198 (442)
T ss_pred             cCCCEEEEccChhhhHHHHHHHHhCCCEEEEECCC
Confidence            4899999999964 466777788888888888743

>PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=81.29  E-value=2  Score=28.75  Aligned_cols=36  Identities=19%  Similarity=0.362  Sum_probs=24.7

Q ss_pred             CceeeEEEeCCchH-----------HHHHHHHhhccCCEEEEEcccc
Q 035717            3 PEGIDIYFENVGGK-----------MLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-----------~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      |..+|+|+-+..-+           .+....++|+|||.++.+|...
T Consensus       156 p~~~D~v~s~fcLE~a~~d~~~y~~al~ni~~lLkpGG~Lil~~~l~  202 (256)
T PF01234_consen  156 PPKFDCVISSFCLESACKDLDEYRRALRNISSLLKPGGHLILAGVLG  202 (256)
T ss_dssp             -SSEEEEEEESSHHHH-SSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred             ccchhhhhhhHHHHHHcCCHHHHHHHHHHHHHHcCCCcEEEEEEEcC
Confidence            44699987644322           3456667899999999998743

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A ....

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=80.21  E-value=1.3  Score=23.75  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=21.3

Q ss_pred             ceeeEEEeCCch-------HHHHHHHHhhccCCEEEE
Q 035717            4 EGIDIYFENVGG-------KMLDAVLINMKIGGQIAV   33 (125)
Q Consensus         4 ~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~   33 (125)
                      +-+|+|+....-       ..+..+.+.|+|+|+++.
T Consensus        59 ~sfD~v~~~~~~~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   59 NSFDVVFSNSVLHHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             T-EEEEEEESHGGGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccccccccceeeccCHHHHHHHHHHHcCcCeEEeC
Confidence            468888754332       247889999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	125
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-49
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-44
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		2e-20
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		3e-16
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		7e-14
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		8e-14
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		2e-13
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		2e-13
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-10
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		8e-10
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-07
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-07
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		3e-07

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  191 bits (484), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 106/124 (85%)
Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRM 61
           FP+GIDIYFENVGGKMLDAVL+NMK+ G+IAVCGMISQYNL++ +G+HNL  LI K++RM
Sbjct: 220 FPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRM 279
Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EGFLV DY HLYPK+LEM+IP IK  K+VY+ED A GLESA  A VGLFSGRN+GKQV  
Sbjct: 280 EGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVM 339
Query: 122 VASE 125
           V+ E
Sbjct: 340 VSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 100/125 (80%)
Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
           CFP GIDIYFENVGGKMLDAVL+NM + G+IAVCGMISQYNL+  +G+HNL+ +I K+ R
Sbjct: 221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR 280
Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           ++GF+VSD+   Y KFLE ++PHI+  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct: 281 IQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340
Query: 121 AVASE 125
            VA E
Sbjct: 341 VVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEP-KGIHNLTRLILKQVRM 61
           P+GID++F+NVGG++LD VL  +    +I +CG ISQYN  E  +G  N   L++ + RM
Sbjct: 216 PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARM 275
Query: 62  EGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAA 121
           EG +V DY   +P+ L+ +   +   K+   ED  EGLE+     + LFSG N GK V  
Sbjct: 276 EGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLK 335
Query: 122 V 122
           V
Sbjct: 336 V 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYN-LDEPKGIHNLTRLILKQVRM 61
           P+G D YF+NVGG+ L+ VL  MK  G+IA+CG IS YN +D+     +   +I KQ+R+
Sbjct: 212 PDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRI 271
Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           EGF+V  +   +  K L  ++  +   KI Y E   +G E+  AA + + +G NLGK V
Sbjct: 272 EGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 330

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQ-VRM 61
           P+G D YF+NVGG+  + V+  MK  G+IA+CG IS YN   P        +++ Q +RM
Sbjct: 228 PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRM 287
Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           E F+V  +      K L+ ++  +   KI Y E   EG E+  AA +G+  G NLGK +
Sbjct: 288 EAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTI 346

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQ-VRM 61
           P+G D YF+NVGG+  + V+  MK  G+IA+CG IS YN   P        +++ Q +RM
Sbjct: 207 PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRM 266
Query: 62  EGFLVSDYN-HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
           E F+V  +      K L+ ++  +   KI Y E   EG E+  AA +G+  G NLGK +
Sbjct: 267 EAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTI 325

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD--EPKGIHNLTRLILKQ-- 58
           P G+D+YF+NVGG + D V+  M     I +CG ISQYN D   P  +      I K+  
Sbjct: 223 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERN 282
Query: 59  VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ 118
           +  E FLV +Y   +   +  +    K  K+   E    GLE+  AA   + +G N+GKQ
Sbjct: 283 ITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQ 342
Query: 119 VAAVASE 125
           +  ++ E
Sbjct: 343 IVCISEE 349

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD--EPKGIHNLTRLILKQ-- 58
           P G+D+YF+NVGG + D V+  M     I +CG ISQYN D   P  +      I K+  
Sbjct: 228 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERN 287
Query: 59  VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ 118
           +  E FLV +Y   +   +  +    K  K+   E    GLE+  AA   + +G N+GKQ
Sbjct: 288 ITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQ 347
Query: 119 VAAVASE 125
           +  ++ E
Sbjct: 348 IVCISEE 354

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD--EPKGIHNLTRLILKQ-- 58
           P G+D+YF+NVGG + +AV+  M     I +CG ISQY+ D   P  +      I K+  
Sbjct: 224 PGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERN 283
Query: 59  VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ 118
           +  E F V +Y   +   +  +    K  K+   E  A+GLE+   A   + +G N+GKQ
Sbjct: 284 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQ 343
Query: 119 VAAVASE 125
           +  ++ +
Sbjct: 344 IVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLD--EPKGIHNLTRLILKQ-- 58
           P G+D+YF+NVGG + + V+        I +CG ISQYN D   P  +      I K+  
Sbjct: 234 PGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERN 293
Query: 59  VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ 118
           +  E F V +Y   +   +  +    K  K+   E  A+GLE+   A     +G N+GKQ
Sbjct: 294 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQ 353
Query: 119 VAAVASE 125
           +  ++ +
Sbjct: 354 IVCISED 360

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL------TRLI 55
           +PEG+D+ +E+VGG M D  +  +   G++ V G IS Y    P G+  +       +L+
Sbjct: 228 YPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLL 285
Query: 56  LKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAE--------GLESALAARV 107
            K   ++GF ++ Y   Y   +  ++       +V   D  +        GLES   A  
Sbjct: 286 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVN 345
Query: 108 GLFSGRNLGKQV 119
            ++ G+N GK V
Sbjct: 346 YMYMGKNTGKIV 357

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL------TRLI 55
           +PEG+D+ +E+VGG M D  +  +   G++ V G IS Y    P G+  +       +L+
Sbjct: 236 YPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLL 293
Query: 56  LKQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAE--------GLESALAARV 107
            K   ++GF ++ Y   Y   +  ++       +V   D  +        GLES   A  
Sbjct: 294 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVN 353
Query: 108 GLFSGRNLGKQV 119
            ++ G+N GK V
Sbjct: 354 YMYMGKNTGKIV 365

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 2   FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL------TRLI 55
           +PEG+D+ +E+VGG M D  +  +   G++ V G IS Y    P G+  +       +L+
Sbjct: 207 YPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLL 264
Query: 56  LKQVRMEGFL----VSDYNHLYPKFLEMIIPHIKWAKI----VYIEDTAEGLESALAARV 107
            K   ++GF     +S Y       LEM +      ++    +  E    GLES   A  
Sbjct: 265 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVN 324
Query: 108 GLFSGRNLGKQV 119
            ++ G+N GK V
Sbjct: 325 YMYMGKNTGKIV 336

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	6e-63
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-55
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	2e-55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-34
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	4e-07
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	4e-07
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	6e-06
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-04
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-04
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	4e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  194 bits (495), Expect = 6e-63
 Identities = 80/125 (64%), Positives = 100/125 (80%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
           CFP GIDIYFENVGGKMLDAVL+NM + G+IAVCGMISQYNL+  +G+HNL+ +I K+ R
Sbjct: 221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR 280

Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVA 120
           ++GF+VSD+   Y KFLE ++PHI+  KI Y+ED A+GLE A  A VGLF G+N+GKQV 
Sbjct: 281 IQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340

Query: 121 AVASE 125
            VA E
Sbjct: 341 VVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  175 bits (446), Expect = 1e-55
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 2/121 (1%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEP-KGIHNLTRLILKQV 59
             P+G D YF+NVGG+ L+ VL  MK  G+IA+CG IS YN  +      +   +I KQ+
Sbjct: 210 ASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQL 269

Query: 60  RMEGFLVSDY-NHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQ 118
           R+EGF+V  +   +  K L  ++  +   KI Y E   +G E+  AA + + +G NLGK 
Sbjct: 270 RIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKA 329

Query: 119 V 119
           V
Sbjct: 330 V 330

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  175 bits (446), Expect = 2e-55
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGI----HNLTRLIL 56
             P G+D+YF+NVGG + D V+  M     I +CG ISQYN D P               
Sbjct: 226 SCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKE 285

Query: 57  KQVRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLG 116
           + +  E FLV +Y   +   +  +    K  K+   E    GLE+  AA   + +G N+G
Sbjct: 286 RNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIG 345

Query: 117 KQVAAVASE 125
           KQ+  ++ E
Sbjct: 346 KQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  120 bits (303), Expect = 3e-34
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 12/133 (9%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYN----LDEPKGIHNLTRLILKQ 58
           PEG+D+ +E+VGG M D  +  +   G++ V G IS Y     L   K      +L+ K 
Sbjct: 229 PEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKS 288

Query: 59  VRMEGFLVSDYNHLYPKFLEMIIPHIKWAKIVYIEDTA--------EGLESALAARVGLF 110
             ++GF ++ Y   Y   +  ++       +V   D           GLES   A   ++
Sbjct: 289 ASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMY 348

Query: 111 SGRNLGKQVAAVA 123
            G+N GK V  + 
Sbjct: 349 MGKNTGKIVVELP 361

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 46.4 bits (110), Expect = 4e-07
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 26/127 (20%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
              DI FE+ G       +I  + GG +  CG  S Y             L +K  ++ G
Sbjct: 305 REPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFD-----NRYLWMKLKKIVG 359

Query: 64  FLVSDYNHLYPKFLEM--------IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNL 115
              +++                  ++P +  + +  + + AE           + + R +
Sbjct: 360 SHGANHEE----QQATNRLFESGAVVPAM--SAVYPLAEAAEACRV-------VQTSRQV 406

Query: 116 GKQVAAV 122
           GK     
Sbjct: 407 GKVAVLC 413

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 46.3 bits (110), Expect = 4e-07
 Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 26/127 (20%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
           E IDI FE+ G +   A +   + GG I  C   S Y  +          L +   R+ G
Sbjct: 313 EDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIG 367

Query: 64  FLVSDYNHLYPKFLEM--------IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNL 115
              ++Y        E         I P +  +K+  +EDT +           +    + 
Sbjct: 368 SHFANYRE----AWEANRLIAKGRIHPTL--SKVYSLEDTGQAAYD-------VHRNLHQ 414

Query: 116 GKQVAAV 122
           GK     
Sbjct: 415 GKVGVLC 421

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 42.6 bits (101), Expect = 6e-06
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 9/118 (7%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
           E   I+ + V G +  A+   M    +  + G +      +   I    +LI +   +EG
Sbjct: 232 EQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDP----DATVIREPGQLIFQHKHIEG 287

Query: 64  FLVSDYNHLYP----KFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGK 117
           F +S++   +       +          +          L  A+A        +  GK
Sbjct: 288 FWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVP-AELTKPNGK 344

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
           +G D   ++ G    + V+     GG+IA+ G  S       +G      +  +Q+ + G
Sbjct: 234 KGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG-----YEGTLPFAHVFYRQLSILG 288

Query: 64  FLV---SDYNHLYPKFLE-MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQV 119
             +   S    +     E  + P +              LE+A      L   R  GK V
Sbjct: 289 STMASKSRLFPILRFVEEGKLKPVV---------GQVLPLEAAAEGHRLLEERRVFGKVV 339

Query: 120 AAVA 123
             V 
Sbjct: 340 LQVG 343

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
            G D   E  GG  L   L  +   G+I+V G++  + +  P     +  L+LK   ++G
Sbjct: 256 RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGP-----VGPLLLKSPVVQG 310

Query: 64  FLV 66
             V
Sbjct: 311 ISV 313

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 12/123 (9%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
               +    VGGK    +   +   G +   G +S     +P  I   +  I K     G
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF----QPVTI-PTSLYIFKNFTSAG 298

Query: 64  FLVSDYNHLYP----KFLEMIIPHIKWAKIVYIEDTA---EGLESALAARVGLFSGRNLG 116
           F V++            L  II   +  K+   +      +G +          +    G
Sbjct: 299 FWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDG 358

Query: 117 KQV 119
           KQ+
Sbjct: 359 KQL 361

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.8
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.8
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.78
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.77
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.76
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.76
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.74
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.74
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.74
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.74
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.74
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.73
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.73
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.73
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.72
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.72
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.72
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.72
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.72
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.72
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.71
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.71
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.7
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.7
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.69
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.69
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.69
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.69
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.69
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.69
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.69
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.69
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.68
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.68
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.68
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.68
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.68
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.67
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.67
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.67
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.67
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.67
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.67
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.66
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.66
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.66
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.66
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.65
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.65
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.64
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.64
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.64
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.63
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.63
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.61
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.61
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.6
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.6
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.6
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.6
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.6
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.59
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.59
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.59
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.57
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.57
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.47
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.46
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.41
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.8
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.39
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	94.25
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	93.93
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	90.67
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	86.14
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	85.68
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	85.18
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	84.82
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	82.31
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	81.98
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	81.76
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	81.67
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	80.28

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.80  E-value=6.9e-19  Score=118.37  Aligned_cols=120  Identities=42%  Similarity=0.715  Sum_probs=99.0

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC-CCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-PKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|++||++|++.+..++++++++|+++.+|.....+... +....+...++.+++++.|++.+.+.....+.+++++
T Consensus       216 ~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  295 (336)
T 4b7c_A          216 PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMA  295 (336)
T ss_dssp             TTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHH
T ss_pred             CCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHH
Confidence            468999999999989999999999999999999765322111 1123455567889999999987666555677899999


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++....+|+++++++||+.+.+++..||+||++
T Consensus       296 ~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          296 TWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999998888899999999999999999999999975

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.80  E-value=8.8e-19  Score=118.20  Aligned_cols=123  Identities=63%  Similarity=1.092  Sum_probs=98.2

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|+|++||++|+..+..++++++++|+++.+|.....+........+...++.+++++.|++.+.+.....+.++++++
T Consensus       223 ~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  302 (345)
T 2j3h_A          223 PNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLP  302 (345)
T ss_dssp             TTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHH
Confidence            35899999999998899999999999999999875532110011223445677889999998765544445677999999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ++++|++++.+..+|+++++++||+.+.+++..||+||.++++
T Consensus       303 l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          303 HIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             HHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             HHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            9999999987776799999999999999998899999998764

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.78  E-value=5.6e-19  Score=119.45  Aligned_cols=124  Identities=21%  Similarity=0.188  Sum_probs=88.1

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC-----------CCCcccHHHHHhccceeeeeeecccc
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-----------PKGIHNLTRLILKQVRMEGFLVSDYN   70 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (125)
                      +++|+|+||||+|++.++.++++++++|+++.+|.........           .....+...++.++.++.|++...+.
T Consensus       205 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~  284 (349)
T 4a27_A          205 SAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL  284 (349)
T ss_dssp             CTTCEEEEEEECC-------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHH
T ss_pred             cCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehhee
Confidence            4579999999999988899999999999999999753211100           00123455677788999998764321


Q ss_pred             ------cchHHHHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           71 ------HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        71 ------~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                            ....+.++++++++++|++++.+..+|+++++++|++.+.+++..||+||+++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          285 FKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             ccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence                  1236779999999999999998888899999999999999999999999998754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.77  E-value=1.9e-18  Score=116.18  Aligned_cols=117  Identities=19%  Similarity=0.207  Sum_probs=95.2

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc---cchHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN---HLYPKFLEM   79 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   79 (125)
                      ++|+|++|||+|+..++.++++++++|+++.+|....     +....+...+..+++++.++++..+.   ....+.+++
T Consensus       215 ~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (334)
T 3qwb_A          215 GKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASG-----LIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDE  289 (334)
T ss_dssp             TSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCTTC-----CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHH
T ss_pred             CCCceEEEECCChHHHHHHHHHhccCCEEEEEcCCCC-----CCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHH
Confidence            4589999999999889999999999999999997542     11233444566788999887655442   223456789


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++++|++++.+..+|+++++++||+.+.+++..||+||++++
T Consensus       290 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          290 FFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            999999999999877779999999999999999999999999863

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.76  E-value=2.1e-17  Score=111.98  Aligned_cols=122  Identities=33%  Similarity=0.508  Sum_probs=96.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCccc----HHHHHhccceeeeeeecccccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHN----LTRLILKQVRMEGFLVSDYNHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      .++|++||++|+..++.++++++++|+++.+|.........+.....    ...++.+++++.|++...+.....+.+++
T Consensus       229 ~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  308 (357)
T 2zb4_A          229 AGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQ  308 (357)
T ss_dssp             TCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHH
T ss_pred             CCCCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHH
Confidence            37999999999988999999999999999998765321111100000    14567789999998765544445677999


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      +++++++|++++....+|+++++++||+.+.+++..||+||+++++
T Consensus       309 ~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          309 LSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             HHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             HHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            9999999999988777799999999999999988889999998653

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.76  E-value=1.8e-18  Score=115.82  Aligned_cols=116  Identities=18%  Similarity=0.198  Sum_probs=95.0

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHH
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   80 (125)
                      .+.++|++||++|++.++.++++++++|+++.+|....     .....+...++.+++++.|++..... ....+.++++
T Consensus       208 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  282 (324)
T 3nx4_A          208 EKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARL  282 (324)
T ss_dssp             CCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHH
T ss_pred             cCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCC-----CCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHH
Confidence            34689999999999999999999999999999987542     11233455677899999998754432 2345678999


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++++|++++. ..+|+++++++|++.+.+++..||+||+++
T Consensus       283 ~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          283 VKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999987 666999999999999999999999999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.74  E-value=1.9e-17  Score=112.26  Aligned_cols=113  Identities=17%  Similarity=0.279  Sum_probs=91.0

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----ccchHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----NHLYPKFLEM   79 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   79 (125)
                      ++|+||||+|++....++++++++|+++.+|....    . ....+...+..+++++.|++.+.+     .....+.+++
T Consensus       240 ~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~----~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  314 (357)
T 1zsy_A          240 QPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAK----Q-PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILT  314 (357)
T ss_dssp             CCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCTT----C-CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHH
T ss_pred             CceEEEECCCcHHHHHHHHhhCCCCEEEEEecCCC----C-CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHH
Confidence            69999999999877889999999999999986432    1 123345567779999999876432     1223466899


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++|++++.+..+|+++++++|++.+.+++..||+||++
T Consensus       315 ~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          315 LCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            9999999999988767799999999999999888889999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.74  E-value=6.8e-18  Score=114.09  Aligned_cols=111  Identities=14%  Similarity=0.085  Sum_probs=91.8

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHH-hccceeeeeeecccccchHHHHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLI-LKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+|+|||++|+. .++.++++++++|+++.+|.....    +...++...++ .+++++.|++.+..     +.++++++
T Consensus       234 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  304 (348)
T 3two_A          234 ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHLGNRKVYGSLIGGI-----KETQEMVD  304 (348)
T ss_dssp             CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHTCSCEEEECCSCCH-----HHHHHHHH
T ss_pred             CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhhCCeEEEEEecCCH-----HHHHHHHH
Confidence            899999999987 899999999999999999875410    11114556666 88999999876543     34889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ++++|++++.+ .+|+++++++|++.+.+++..||+||+++++
T Consensus       305 l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          305 FSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             HHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             HHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            99999999865 4699999999999999999899999999764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.74  E-value=1.1e-17  Score=113.32  Aligned_cols=116  Identities=16%  Similarity=0.270  Sum_probs=94.4

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccc-----hHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHL-----YPKFL   77 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~   77 (125)
                      ++|+|++|||+|++.+..++++++++|+++.+|.....    .....+...++.+++++.|++...+...     ..+.+
T Consensus       233 ~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  308 (353)
T 4dup_A          233 GQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGA----VAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLL  308 (353)
T ss_dssp             SSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTTCS----EEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHH
T ss_pred             CCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecCCC----cccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHH
Confidence            45899999999999999999999999999999875421    1111455667889999999887654321     23347


Q ss_pred             HHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           78 EMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++++|++++.+..+|+++++++|++.+.+++..||+||++
T Consensus       309 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          309 SEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            889999999999998887899999999999999999999999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.74  E-value=3.6e-17  Score=109.88  Aligned_cols=119  Identities=39%  Similarity=0.608  Sum_probs=93.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC-CCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE-PKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   81 (125)
                      .++|++||++|+..+..++++++++|+++.+|.....+... +....+...++.+++++.|++.+.+. ....+.+++++
T Consensus       213 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  292 (333)
T 1v3u_A          213 DGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM  292 (333)
T ss_dssp             TCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHH
T ss_pred             CCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHH
Confidence            47999999999988999999999999999998754311000 11112455677899999998765442 33466789999


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++....+++++++++||+.+.+++..||++|++
T Consensus       293 ~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          293 KWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999988777799999999999999988889999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.74  E-value=1.6e-17  Score=115.85  Aligned_cols=111  Identities=22%  Similarity=0.189  Sum_probs=92.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +|+|+|||++|++.+..++++++++|+++.+|....     ....++...+..+++++.|++.+.+..     +.+++++
T Consensus       313 ~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~l  382 (456)
T 3krt_A          313 EDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG-----YMHEYDNRYLWMSLKRIIGSHFANYRE-----AWEANRL  382 (456)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC-----SEEEEEHHHHHHTTCEEEECCSCCHHH-----HHHHHHH
T ss_pred             CCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC-----cccccCHHHHHhcCeEEEEeccCCHHH-----HHHHHHH
Confidence            589999999999899999999999999999987542     112345566777888999987654432     5678999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++|++++.+..+|+|+++++|++.+.+++..||+||.+.+
T Consensus       383 ~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          383 IAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             HHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             HHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            99999998887789999999999999999999999998743

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.73  E-value=1.5e-17  Score=112.18  Aligned_cols=116  Identities=13%  Similarity=0.037  Sum_probs=90.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+|+|++|. ..++.++++++++|+++.+|.....   ......+...++.+++++.|++.........+.++++++
T Consensus       228 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~  304 (346)
T 4a2c_A          228 RFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASR  304 (346)
T ss_dssp             CSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHH
T ss_pred             CCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHH
Confidence            479999999995 5789999999999999999875421   111123445677899999998764433333456899999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++.  +..+|+|+|+++||+.+++++..||+||++
T Consensus       305 l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          305 LLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9999998654  555699999999999999999999999974

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.73  E-value=3e-17  Score=114.17  Aligned_cols=112  Identities=19%  Similarity=0.164  Sum_probs=92.4

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|+|++||++|+..++.++++++++|+++.+|....     ....++...++.+++++.|++.+.+.     .+.++++
T Consensus       304 g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~  373 (447)
T 4a0s_A          304 GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSG-----YLHTFDNRYLWMKLKKIVGSHGANHE-----EQQATNR  373 (447)
T ss_dssp             SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTC-----SEEEEEHHHHHHTTCEEEECCSCCHH-----HHHHHHH
T ss_pred             CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCC-----cccccCHHHHHhCCCEEEecCCCCHH-----HHHHHHH
Confidence            3589999999999889999999999999999986542     11234556677888999887654432     3678899


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++|++++.+..+|+++++++||+.+.+++..||++|.+.+
T Consensus       374 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          374 LFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             HHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             HHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            999999998887789999999999999999999999998753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.73  E-value=5.9e-18  Score=115.00  Aligned_cols=108  Identities=23%  Similarity=0.290  Sum_probs=91.0

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +|+|+||||+|+..+..++++++++|+++.+|.....     ....+...++.+++++.|++.+.     .+.+++++++
T Consensus       256 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l  325 (363)
T 3uog_A          256 RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-----RRALEDLVGA  325 (363)
T ss_dssp             CCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC-----HHHHHHHHHH
T ss_pred             CCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC-----HHHHHHHHHH
Confidence            4899999999988899999999999999999975421     12334556788999999987543     3458999999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++|++++.+..+|+++++++|++.+++++ .||+||++
T Consensus       326 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          326 VDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            999999988888899999999999999988 99999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.72  E-value=2.9e-17  Score=110.83  Aligned_cols=110  Identities=14%  Similarity=0.103  Sum_probs=90.7

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ..|+|+++|++++ ..+..++++++++|+++.+|....      ....+...++.+++++.|++.+.+.     .+++++
T Consensus       230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~~~-----~~~~~~  298 (348)
T 4eez_A          230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGSLVGTRL-----DLAEAF  298 (348)
T ss_dssp             SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEECCSCCHH-----HHHHHH
T ss_pred             CCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEEecCCHH-----HHHHHH
Confidence            3589999998876 468999999999999999987432      2234566788899999998765443     388999


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++|++++.+ .+|+|+|+++||+.+++++..||+||+++.
T Consensus       299 ~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          299 QFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             HHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             HHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            999999999865 459999999999999999999999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.72  E-value=3.2e-17  Score=109.86  Aligned_cols=114  Identities=18%  Similarity=0.164  Sum_probs=90.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhc-cceeeeeeeccc---ccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILK-QVRMEGFLVSDY---NHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~   79 (125)
                      +|+|++||++|++.+..++++++++|+++.+|....     +....+...+..+ ++.+.+..+..+   .....+.+++
T Consensus       208 ~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
T 3jyn_A          208 KKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASG-----PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADE  282 (325)
T ss_dssp             CCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTTC-----CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHH
T ss_pred             CCceEEEECCChHHHHHHHHHhcCCCEEEEEecCCC-----CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHH
Confidence            589999999999889999999999999999997542     1112344455555 566665443222   2345667789


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++|++++.+..+|+++++++||+.+.+++..||+||.+
T Consensus       283 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          283 LFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999998777799999999999999999999999974

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.72  E-value=2.8e-17  Score=110.49  Aligned_cols=116  Identities=16%  Similarity=0.110  Sum_probs=92.4

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHH-HHHhcc--ceeeeeeeccc--ccchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLT-RLILKQ--VRMEGFLVSDY--NHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~   78 (125)
                      .++|++||++|+..++.++++++++|+++.+|.....     ....+.. .++.++  +++.|++...+  +....+.++
T Consensus       213 ~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  287 (333)
T 1wly_A          213 KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSK  287 (333)
T ss_dssp             CCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHH
T ss_pred             CCCeEEEECCcHHHHHHHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHH
Confidence            4799999999998899999999999999999875421     1123444 566788  88888754221  112345789


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++++++|++++.+..+|+++++++|++.+.+++..||++|++++
T Consensus       288 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          288 CLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            9999999999998877789999999999999998888999998754

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.72  E-value=1.5e-16  Score=108.08  Aligned_cols=122  Identities=28%  Similarity=0.458  Sum_probs=94.4

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCC--CCC--cccHHHHHhccceeeeeeecccccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE--PKG--IHNLTRLILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +.|+|++|||+|+..++.++++++++|+++.+|.........  +..  ......++.+++++.|++...+.....+.++
T Consensus       229 ~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  308 (362)
T 2c0c_A          229 PEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMS  308 (362)
T ss_dssp             TTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHH
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHH
Confidence            458999999999988999999999999999998754321000  000  0112456788999999876554444466789


Q ss_pred             HHHHHHHcCceeeeee--------cccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           79 MIIPHIKWAKIVYIED--------TAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~--------~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++++++|++++.+.        ..|+++++++|++.+.+++..||+||++.+
T Consensus       309 ~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          309 HLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            9999999999998765        337999999999999988888999998754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.72  E-value=1e-17  Score=113.03  Aligned_cols=113  Identities=16%  Similarity=0.227  Sum_probs=86.2

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc----ccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY----NHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (125)
                      +|+|++|||+|++.+..++++++++|+++.+|.....     ....+...++.+++++.|++...+    +....+.+++
T Consensus       226 ~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  300 (342)
T 4eye_A          226 AGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAG  300 (342)
T ss_dssp             SCEEEEEESCC--CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHH
T ss_pred             CCceEEEECCchhHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHH
Confidence            4899999999998899999999999999999875421     111223335678999999876443    2334567899


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++| +++.+..+|+++++++|++.+.+++..||+||++
T Consensus       301 ~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          301 LEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999 9888888899999999999999999999999974

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.72  E-value=5.8e-17  Score=110.03  Aligned_cols=110  Identities=16%  Similarity=0.062  Sum_probs=88.9

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|+|||++|++ .++.++++++++|+++.+|....      ....+...+..+++++.+++.+ ..     .+++++
T Consensus       250 g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~-~~-----~~~~~~  317 (363)
T 3m6i_A          250 GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------EIQIPFMRASVREVDLQFQYRY-CN-----TWPRAI  317 (363)
T ss_dssp             SCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------CCCCCHHHHHHHTCEEEECCSC-SS-----CHHHHH
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------CccccHHHHHhcCcEEEEccCC-HH-----HHHHHH
Confidence            45899999999987 78999999999999999987432      1234566778899999998654 22     388899


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcC-CCcCeEEEEecC
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSG-RNLGKQVAAVAS  124 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~~~  124 (125)
                      +++++|++++  .+..+|+++++++||+.+.++ ...+|++|+.++
T Consensus       318 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          318 RLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            9999999954  455669999999999999987 677999999764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.72  E-value=5.3e-17  Score=109.69  Aligned_cols=114  Identities=18%  Similarity=0.102  Sum_probs=89.0

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-------ccchH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-------NHLYP   74 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~   74 (125)
                      ++|+|++|||+|+. .++.++++++++|+++.+|...        ...+...+..+++++.+.+....       .....
T Consensus       215 ~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (346)
T 3fbg_A          215 IELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHH  286 (346)
T ss_dssp             CCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHH
T ss_pred             CCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHH
Confidence            46899999999986 4799999999999999887521        12234445668888888654321       11235


Q ss_pred             HHHHHHHHHHHcCceeeeeeccc---chhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           75 KFLEMIIPHIKWAKIVYIEDTAE---GLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        75 ~~~~~~~~l~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +.++++++++++|++++.+..+|   +++++++|++.+.+++..||+||++++
T Consensus       287 ~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          287 EYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            77899999999999998876665   999999999999999999999999865

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.71  E-value=2.1e-17  Score=111.50  Aligned_cols=107  Identities=20%  Similarity=0.084  Sum_probs=74.0

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|+|||++|+. .++.++++++++|+++.+|....     + ..++...++.+++++.|++...     .+.++++++
T Consensus       237 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  305 (344)
T 2h6e_A          237 LGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-----R-VSLEAFDTAVWNKKLLGSNYGS-----LNDLEDVVR  305 (344)
T ss_dssp             CCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-----C-CCCCHHHHHHTTCEEEECCSCC-----HHHHHHHHH
T ss_pred             CCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC-----C-cccCHHHHhhCCcEEEEEecCC-----HHHHHHHHH
Confidence            4899999999987 89999999999999999987432     1 1345556778999999976432     345899999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++.+ .+|+++++++|++.+++++..||+||++
T Consensus       306 l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          306 LSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             HHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            99999999887 7799999999999999888889999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.71  E-value=5.1e-17  Score=108.73  Aligned_cols=108  Identities=21%  Similarity=0.092  Sum_probs=87.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      +|+|++|||+|++....++++++++|+++.+|....        ......+..+++++.+++...    ..+.+++++++
T Consensus       214 ~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l  281 (321)
T 3tqh_A          214 TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITA--------GRVIEVAKQKHRRAFGLLKQF----NIEELHYLGKL  281 (321)
T ss_dssp             SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTH--------HHHHHHHHHTTCEEECCCCCC----CHHHHHHHHHH
T ss_pred             cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCc--------hhhhhhhhhcceEEEEEecCC----CHHHHHHHHHH
Confidence            589999999999888999999999999999975321        111223456788888754321    24568999999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++|++++.+..+|+++++++||+.+++++..||+||+++
T Consensus       282 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          282 VSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            9999999988778999999999999999999999999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.70  E-value=2.8e-17  Score=111.10  Aligned_cols=113  Identities=16%  Similarity=0.159  Sum_probs=88.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH-HHHHhccceeeeeeecccc----cchHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL-TRLILKQVRMEGFLVSDYN----HLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~   78 (125)
                      +|+|++|||+|+..+..++++++++|+++.+|.....    + ...+. ..++.+++++.|++.+.+.    ....+.++
T Consensus       232 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~----~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (349)
T 3pi7_A          232 EQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD----A-TVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAIL  306 (349)
T ss_dssp             HCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS----C-CCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHH
T ss_pred             CCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC----C-CCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHH
Confidence            4799999999998889999999999999999865421    1 12344 5678899999998765432    22356788


Q ss_pred             HHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++++|++++.+..+|+++++++|++.+. ++..||+||++
T Consensus       307 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          307 EAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             HC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             HHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            99999999999988777899999999999554 45679999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.70  E-value=1.1e-16  Score=107.91  Aligned_cols=109  Identities=24%  Similarity=0.319  Sum_probs=89.3

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      .++|++||++|+..++.++++++++|+++.+|.....     ...++...++.+++++.|++...     .+.+++++++
T Consensus       234 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~l  303 (343)
T 2eih_A          234 KGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KSRLFPILRF  303 (343)
T ss_dssp             TCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GGGHHHHHHH
T ss_pred             CCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HHHHHHHHHH
Confidence            4899999999977899999999999999999875421     11234455678899999876332     2348899999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++|++++.+..+|+++++++|++.+++++..||++|++
T Consensus       304 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          304 VEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            999999988877799999999999999888889999986

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.69  E-value=2.2e-17  Score=110.86  Aligned_cols=115  Identities=21%  Similarity=0.285  Sum_probs=90.5

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   81 (125)
                      ..++|++|||+|++.+..++++++++|+++.+|....     .....+...++.+++++.|++..... ....+.++++.
T Consensus       215 ~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  289 (330)
T 1tt7_A          215 KQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMS  289 (330)
T ss_dssp             CCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTT
T ss_pred             cCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCC-----CccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHH
Confidence            3589999999999889999999999999999987542     11123344567889999997532222 22345678888


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++.+..+|+++++++|++.+.+++..||+||++
T Consensus       290 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          290 SDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            88999999887777799999999999999888889999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.69  E-value=1.5e-16  Score=108.16  Aligned_cols=113  Identities=12%  Similarity=0.002  Sum_probs=89.6

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-----c--cchH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-----N--HLYP   74 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~   74 (125)
                      ++|+|+||||+|+. .++.++++++++|+++.+|...         ..+...+..+++++.+++....     .  ....
T Consensus       237 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~  307 (363)
T 4dvj_A          237 LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQG  307 (363)
T ss_dssp             SCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHH
T ss_pred             CCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHH
Confidence            46899999999986 7899999999999999996421         2234445678888888654321     1  1125


Q ss_pred             HHHHHHHHHHHcCceeeeeecc---cchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           75 KFLEMIIPHIKWAKIVYIEDTA---EGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        75 ~~~~~~~~l~~~g~i~~~~~~~---~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +.++++++++++|++++.+..+   |+++++++|++.+.+++..||+||++..
T Consensus       308 ~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          308 RLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             HHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence            6789999999999999887665   4999999999999999999999999853

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.69  E-value=3.6e-16  Score=105.97  Aligned_cols=109  Identities=17%  Similarity=0.158  Sum_probs=87.6

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|+|||++|+. .++.++++++++|+++.+|....      ...++...+..+++++.|++.+  ..    .++++++
T Consensus       241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~--~~----~~~~~~~  308 (356)
T 1pl8_A          241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFRY--CN----TWPVAIS  308 (356)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCSC--SS----CHHHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEEeccc--HH----HHHHHHH
Confidence            5899999999975 68999999999999999986321      1234556678899999997643  22    2888999


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEecCC
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAVASE  125 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  125 (125)
                      ++++|++++  .+..+|+++++++||+.++++ ..||+||+++++
T Consensus       309 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          309 MLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             HHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             HHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            999999763  445569999999999999988 789999998653

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.69  E-value=1e-16  Score=108.87  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=89.9

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc----cchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN----HLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   78 (125)
                      ++|+|+||||+|+.....++++++++|+++.+|.....     ....+...+..+++++.|++...+.    ....+.++
T Consensus       243 ~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  317 (364)
T 1gu7_A          243 GGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN  317 (364)
T ss_dssp             TCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHH
T ss_pred             CCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHH
Confidence            35899999999998777899999999999999874421     1233455667789999998754321    11246689


Q ss_pred             HHHHHHHcCceeeeeecccch---hHHHHHHHHHhcCCCcCeEEEEe
Q 035717           79 MIIPHIKWAKIVYIEDTAEGL---ESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        79 ~~~~l~~~g~i~~~~~~~~~l---~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++++|++++....++++   +++++||+.+.+++..||+||++
T Consensus       318 ~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          318 QIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999876666655   59999999999888889999974

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.69  E-value=1.7e-16  Score=107.56  Aligned_cols=115  Identities=18%  Similarity=0.338  Sum_probs=90.4

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH-HHHHhccceeeeeeecccccch-----HHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL-TRLILKQVRMEGFLVSDYNHLY-----PKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~   77 (125)
                      +++|++|||+|+..+..++++++++|+++.+|.....     ....+. ..++.+++++.|++........     ...+
T Consensus       230 ~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  304 (354)
T 2j8z_A          230 AGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFT  304 (354)
T ss_dssp             SCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHH
T ss_pred             CCceEEEECCCchHHHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHH
Confidence            4799999999998899999999999999999875421     123455 5677889999998765432211     2234


Q ss_pred             HHHHHHHHcC---ceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           78 EMIIPHIKWA---KIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        78 ~~~~~l~~~g---~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++++++++|   ++++.+..+|+++++++|++.+.+++..||++|+++
T Consensus       305 ~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          305 EQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            5688999999   888887778999999999999998888899999875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.69  E-value=1.2e-16  Score=107.87  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=90.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc------ccchHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY------NHLYPKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~   77 (125)
                      +|+|++|||+|++.+..++++++++|+++.+|...         ..+...+..+++++.+++....      .....+.+
T Consensus       215 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  285 (343)
T 3gaz_A          215 QGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML  285 (343)
T ss_dssp             SCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHH
Confidence            58999999999999999999999999999998643         1233456778999988754321      12234678


Q ss_pred             HHHHHHHHcCceeeeee-cccchhHHHHHHHHHhcCCC----cCeEEEEecC
Q 035717           78 EMIIPHIKWAKIVYIED-TAEGLESALAARVGLFSGRN----LGKQVAAVAS  124 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~----~gkvvi~~~~  124 (125)
                      +++++++++|++++.+. .+|+++++++|++.+.+++.    .||++++...
T Consensus       286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            99999999999999887 57999999999999998754    6899998653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.69  E-value=1.5e-16  Score=107.15  Aligned_cols=109  Identities=15%  Similarity=0.191  Sum_probs=89.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|++||++|+ ..++.++++++++|+++.+|....      ....+...++.+++++.|++.+.     .+.++++++
T Consensus       229 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  297 (339)
T 1rjw_A          229 GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT-----RKDLQEALQ  297 (339)
T ss_dssp             SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC------CCccCHHHHHhCCcEEEEeccCC-----HHHHHHHHH
Confidence            479999999997 678999999999999999987432      12345556778899999876433     245889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++|++++.. .+|+++++++|++.+++++..||+||++++
T Consensus       298 l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          298 FAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999864 459999999999999998888999999865

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.69  E-value=3.9e-17  Score=110.22  Aligned_cols=107  Identities=17%  Similarity=0.161  Sum_probs=87.5

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|+|||++|++ .++.++++++++|+++.+|.....     ...++. .++.+++++.+++.+..     +.++++++
T Consensus       238 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~~i~g~~~~~~-----~~~~~~~~  306 (345)
T 3jv7_A          238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGASVVTPYWGTR-----SELMEVVA  306 (345)
T ss_dssp             GCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTCEEECCCSCCH-----HHHHHHHH
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCCEEEEEecCCH-----HHHHHHHH
Confidence            4899999999987 799999999999999999875421     112232 45678899988765432     45899999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++.. .+|+++++++||+.+.+++..||+||++
T Consensus       307 l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          307 LARAGRLDIHT-ETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHTTCCCCCE-EEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHcCCCceEE-EEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            99999999854 5699999999999999999999999864

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.68  E-value=2.1e-16  Score=106.44  Aligned_cols=108  Identities=16%  Similarity=0.151  Sum_probs=89.9

Q ss_pred             eeeEEEeCCc-hHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVG-GKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      |+|++||++| ...++.++++++++|+++.+|....      ....+...++.+++++.|++.+..     +.+++++++
T Consensus       232 ~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l  300 (340)
T 3s2e_A          232 GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVGTR-----SDLQESLDF  300 (340)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSCCH-----HHHHHHHHH
T ss_pred             CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecCCH-----HHHHHHHHH
Confidence            7999999998 4678999999999999999987431      123455667889999999875432     448999999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++|++++.+. +|+++++++|++.+++++..||+||++++
T Consensus       301 ~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          301 AAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999998654 47999999999999999999999999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.68  E-value=7.8e-17  Score=107.01  Aligned_cols=112  Identities=20%  Similarity=0.199  Sum_probs=87.0

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH-
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP-   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   82 (125)
                      +|+|++|| +|++.++.++++++++|+++.+|.....     ....+...++.+++++.|++...+ ....+.++++++ 
T Consensus       188 ~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~  260 (302)
T 1iz0_A          188 GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGF  260 (302)
T ss_dssp             TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHH
T ss_pred             cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhh
Confidence            47999999 9988899999999999999999875421     112334456788999999865433 223556888899 


Q ss_pred             --HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 --HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 --l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                        ++++|++++.+..+|+++++++|++.+.+++..||+++++
T Consensus       261 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          261 LLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             hHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence              9999999988777899999999999999888889999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.68  E-value=1.6e-16  Score=107.17  Aligned_cols=110  Identities=15%  Similarity=0.122  Sum_probs=87.5

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH-HHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL-TRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++|+|+|||++|+ ..++.++++++++|+++.+|....      ...++. ..++.+++++.|++...    ..+.++++
T Consensus       229 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~  298 (343)
T 2dq4_A          229 GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR----LWQTWMQG  298 (343)
T ss_dssp             SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC----TTHHHHHH
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC----CHHHHHHH
Confidence            3589999999997 678999999999999999987431      123455 56678899999976431    12458899


Q ss_pred             HHHHHcCce--eeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           81 IPHIKWAKI--VYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++++|++  ++.+..+|+++++++|++.+++++. ||+||+++
T Consensus       299 ~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          299 TALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             HHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            999999995  4555566999999999999998876 99999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.68  E-value=8e-18  Score=112.34  Aligned_cols=116  Identities=12%  Similarity=0.047  Sum_probs=75.8

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccccc---chHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNH---LYPKFLEM   79 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   79 (125)
                      ++|+|+||||+|++....++++++++|+++.+|....    ..........+..+++++.+++.+....   ...+.+++
T Consensus       197 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (315)
T 3goh_A          197 TQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIP----APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEA  272 (315)
T ss_dssp             CSCEEEEECC-------TTGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHH
T ss_pred             CCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCC----ccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHH
Confidence            5689999999999888899999999999999975321    0101101111223344444443222211   23456889


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++++|++++.+..+|+++++++||+.+.  +..||+||++++
T Consensus       273 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          273 LLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             HHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             HHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            9999999999988877899999999999998  678999999864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.68  E-value=1.1e-16  Score=109.08  Aligned_cols=110  Identities=15%  Similarity=0.162  Sum_probs=87.6

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+|||++|+. .++.++++++++|+++.+|....     +...++...++.+++++.|++.+..     +.++++++
T Consensus       256 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  325 (369)
T 1uuf_A          256 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGGI-----PETQEMLD  325 (369)
T ss_dssp             TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCCH-----HHHHHHHH
T ss_pred             cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC-----CccccCHHHHHhCCcEEEEeecCCH-----HHHHHHHH
Confidence            5899999999976 68899999999999999987532     1112345567788999999765432     35889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++|++++.+. +|+++++++|++.+.+++..||+||++++
T Consensus       326 l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          326 FCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             HHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             HHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999998765 59999999999999998888999998853

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.67  E-value=1.5e-16  Score=107.49  Aligned_cols=108  Identities=18%  Similarity=0.186  Sum_probs=89.4

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++|++||++|+. .++.++++++++|+++.+|....    .+  .++...++.+++++.|++.+.     .+.++++++
T Consensus       239 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----~~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  307 (347)
T 1jvb_A          239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA----DL--HYHAPLITLSEIQFVGSLVGN-----QSDFLGIMR  307 (347)
T ss_dssp             SCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC----CC--CCCHHHHHHHTCEEEECCSCC-----HHHHHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC----CC--CCCHHHHHhCceEEEEEeccC-----HHHHHHHHH
Confidence            4899999999986 78999999999999999987431    11  335556778899999876533     345899999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++|++++.+..+|+++++++|++.+++++..||+||++
T Consensus       308 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          308 LAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            9999999987777799999999999999988889999974

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.67  E-value=1.7e-16  Score=108.15  Aligned_cols=112  Identities=14%  Similarity=0.156  Sum_probs=87.8

Q ss_pred             CCceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            2 FPEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++.|+|+|||++|+ ..++.++++++++|+++.+|.....    .....+...++.+++++.|++.+.. .     ++++
T Consensus       250 ~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~-~-----~~~~  319 (370)
T 4ej6_A          250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFINPF-V-----HRRA  319 (370)
T ss_dssp             STTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCSCTT-C-----HHHH
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEeccChH-H-----HHHH
Confidence            34589999999994 6799999999999999999875421    1224466778889999999875432 2     7889


Q ss_pred             HHHHHcCceeee--eecccchhHHHHHHHHHhcCC-CcCeEEEEec
Q 035717           81 IPHIKWAKIVYI--EDTAEGLESALAARVGLFSGR-NLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~  123 (125)
                      ++++++|++++.  +..+|+|+++++|++.+.+++ ..+|++++++
T Consensus       320 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          320 ADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             HHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             HHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            999999999654  556699999999999998876 4578888764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.67  E-value=1.2e-16  Score=108.38  Aligned_cols=109  Identities=18%  Similarity=0.195  Sum_probs=88.4

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+|||++|+. .++.++++++++|+++.+|....     +....+.. ++.+++++.|++.+.     .+.++++++
T Consensus       243 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~-~~~~~~~i~g~~~~~-----~~~~~~~~~  311 (357)
T 2cf5_A          243 DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN-----PLQFLTPL-LMLGRKVITGSFIGS-----MKETEEMLE  311 (357)
T ss_dssp             TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS-----CCCCCHHH-HHHHTCEEEECCSCC-----HHHHHHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC-----CccccCHH-HHhCccEEEEEccCC-----HHHHHHHHH
Confidence            4799999999975 68899999999999999987442     11113444 778899999976533     235889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++|++++.+ .+|+++++++|++.+++++..||+||++++
T Consensus       312 l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          312 FCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             HHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            99999999876 469999999999999998888999999754

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.67  E-value=4.6e-16  Score=105.32  Aligned_cols=112  Identities=17%  Similarity=0.200  Sum_probs=89.1

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   82 (125)
                      +++|++||++|+..+..++++++++|+++.+|...      . ...+...++.+++++.|+++... .....+.++.+.+
T Consensus       238 ~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~~------~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~  310 (351)
T 1yb5_A          238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG------T-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA  310 (351)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS------C-EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCChHHHHHHHHhccCCCEEEEEecCC------C-CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHH
Confidence            47999999999988999999999999999998532      1 12344456788999999865332 2334566778888


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHH-HhcCCCcCeEEEEe
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVG-LFSGRNLGKQVAAV  122 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~-~~~~~~~gkvvi~~  122 (125)
                      ++++|++++.+..+|+++++++|++. +++++..||+||++
T Consensus       311 ~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          311 GMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999888778999999999998 66667789999974

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.67  E-value=1.6e-16  Score=117.05  Aligned_cols=115  Identities=18%  Similarity=0.199  Sum_probs=89.9

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   81 (125)
                      ++|+|+|||++|++.+..+++|++++||++.+|....      ..... .....+++++.++.+... +....+.+++++
T Consensus       410 g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~------~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~  482 (795)
T 3slk_A          410 GRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDV------RDPVE-VADAHPGVSYQAFDTVEAGPQRIGEMLHELV  482 (795)
T ss_dssp             SSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTC------CCHHH-HHHHSSSEEEEECCGGGGHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccccc------cCccc-ccccCCCCEEEEeeccccCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999986431      01111 122346677766654321 233467799999


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++|++++.+..+|+++++++||+.+.+++..||+||++.+
T Consensus       483 ~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          483 ELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             HHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             HHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            9999999999877779999999999999999999999999753

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.67  E-value=9.9e-16  Score=103.64  Aligned_cols=109  Identities=12%  Similarity=0.094  Sum_probs=87.3

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +|+|++||++|+. .++.++++++++|+++.+|....      ....+...+..+++++.|++.+  ..    .++++++
T Consensus       239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~--~~----~~~~~~~  306 (352)
T 1e3j_A          239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFRY--CN----DYPIALE  306 (352)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCSC--SS----CHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEEeccc--hH----HHHHHHH
Confidence            5799999999975 68999999999999999986321      1234556678899999987643  22    2888999


Q ss_pred             HHHcCceee--eeecccchhHHHHHHHHHhcCC-CcCeEEEEecC
Q 035717           83 HIKWAKIVY--IEDTAEGLESALAARVGLFSGR-NLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~  124 (125)
                      ++++|++++  .+..+|+++++++|++.+.+++ ..||+||++++
T Consensus       307 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          307 MVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             HHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            999999763  4455699999999999999887 68999998863

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.66  E-value=5.6e-16  Score=103.85  Aligned_cols=114  Identities=17%  Similarity=0.065  Sum_probs=88.7

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhc-cceeeeeeecccc---cchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILK-QVRMEGFLVSDYN---HLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~   79 (125)
                      +++|++||++|+..++.++++++++|+++.+|..+..     ...++...++.+ ++++.+.....+.   ....+.+++
T Consensus       208 ~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (327)
T 1qor_A          208 KKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE  282 (327)
T ss_dssp             CCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHH
T ss_pred             CCceEEEECCchHHHHHHHHHhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHH
Confidence            4799999999988899999999999999999875421     112344455666 6777654332221   123566899


Q ss_pred             HHHHHHcCceeeeee--cccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           80 IIPHIKWAKIVYIED--TAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++++|++++.+.  .+|+++++++|++.+.+++..||++|++
T Consensus       283 ~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          283 LFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999998877  6799999999999999988889999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.66  E-value=2.2e-16  Score=105.89  Aligned_cols=114  Identities=23%  Similarity=0.284  Sum_probs=87.7

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc-cchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN-HLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   81 (125)
                      ..++|++||++|++.+..++++++++|+++.+|..+..     ....+...++.+++++.|++..... ....+.++++.
T Consensus       214 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  288 (328)
T 1xa0_A          214 KQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLA  288 (328)
T ss_dssp             SCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHH
T ss_pred             CCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCC-----CCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHH
Confidence            35899999999998899999999999999999875421     1123344567889999987432221 22345678888


Q ss_pred             HHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           82 PHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        82 ~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++++| +++. ..+|+++++++||+.+++++..||++|+++
T Consensus       289 ~~~~~g-l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          289 GDLKPD-LERI-AQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TTTCCC-HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHHcC-Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            888888 7764 456999999999999998888899999863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.66  E-value=1.3e-15  Score=103.66  Aligned_cols=112  Identities=18%  Similarity=0.223  Sum_probs=88.2

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+|||++|+ ..++.++++++++|+++.+|.....    ....++...++.+++++.|++...+.  ..+.++++++
T Consensus       257 gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~  330 (371)
T 1f8f_A          257 GGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVR  330 (371)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHH
T ss_pred             CCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----CccccCHHHHHhCCCEEEEeCCCCCc--hHHHHHHHHH
Confidence            489999999997 5789999999999999999875421    11234555677889999998654321  2456899999


Q ss_pred             HHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           83 HIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        83 l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++|++++.  +.. |+++++++||+.+.+++. +|++|+++
T Consensus       331 l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          331 LYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             HHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             HHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            9999999864  445 999999999999988765 89999863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.66  E-value=4.5e-16  Score=105.15  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=88.5

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ++|++||++|. ..++.++++|+++|+++.+|....     .....+...++.+++++.|++...     .+.+++++++
T Consensus       238 ~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l  307 (347)
T 2hcy_A          238 GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG-----AKCCSDVFNQVVKSISIVGSYVGN-----RADTREALDF  307 (347)
T ss_dssp             CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT-----CEEEEEHHHHHHTTCEEEECCCCC-----HHHHHHHHHH
T ss_pred             CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC-----CCCCCCHHHHhhCCcEEEEccCCC-----HHHHHHHHHH
Confidence            79999999997 678999999999999999987431     112345556778999999976533     2358899999


Q ss_pred             HHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           84 IKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        84 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++|++++.. .+|+++++++|++.+++++..||+||+++
T Consensus       308 ~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          308 FARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             HHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             HHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            9999999864 36999999999999999888899999875

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.65  E-value=4.7e-16  Score=105.51  Aligned_cols=104  Identities=20%  Similarity=0.230  Sum_probs=86.2

Q ss_pred             ceeeEEEeCCchH---HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGGK---MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+|+|||++|+.   .++.++++  ++|+++.+|....     +  ..+...++.+++++.|++...     .+.++++
T Consensus       253 ~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~  318 (359)
T 1h2b_A          253 RGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVSFEGSLVGN-----YVELHEL  318 (359)
T ss_dssp             CCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCEEEECCSCC-----HHHHHHH
T ss_pred             CCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcEEEEecCCC-----HHHHHHH
Confidence            3899999999987   78888887  9999999987432     1  335556778999999976433     3458999


Q ss_pred             HHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++|++++.+ .+|+++++++|++.+++++..||+||++
T Consensus       319 ~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          319 VTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            9999999999887 7799999999999999988889999974

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.65  E-value=2.1e-16  Score=107.54  Aligned_cols=109  Identities=16%  Similarity=0.023  Sum_probs=88.9

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+|+|||++|+. .++.++++++++|+++.+|....     + ...+...++.+++++.|++.+.     .+.+.++++
T Consensus       250 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  318 (366)
T 1yqd_A          250 GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK-----P-LELPAFSLIAGRKIVAGSGIGG-----MKETQEMID  318 (366)
T ss_dssp             TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS-----C-EEECHHHHHTTTCEEEECCSCC-----HHHHHHHHH
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC-----C-CCcCHHHHHhCCcEEEEecCCC-----HHHHHHHHH
Confidence            4899999999975 68899999999999999987431     1 1245556778899999876533     234889999


Q ss_pred             HHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           83 HIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        83 l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++|++++.+ .+|+++++++|++.+.+++..||+||++++
T Consensus       319 l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          319 FAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             HHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             HHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            99999999876 469999999999999998888999998753

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.64  E-value=1.8e-15  Score=101.91  Aligned_cols=114  Identities=15%  Similarity=0.225  Sum_probs=84.5

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHH-hccceeeeeeeccc-----ccchHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLI-LKQVRMEGFLVSDY-----NHLYPKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~   77 (125)
                      +|+|++|||+|+.....++++++++|+++.+|.....       ..++..+. ..++++..++...+     .....+.+
T Consensus       212 ~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (340)
T 3gms_A          212 IGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETF  284 (340)
T ss_dssp             SCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred             CCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHH
Confidence            4899999999998878888999999999999975421       12333333 23444444443221     11235678


Q ss_pred             HHHHHHHHcCceeee-eecccchhHHHHHHHHHhcCCC-cCeEEEEecC
Q 035717           78 EMIIPHIKWAKIVYI-EDTAEGLESALAARVGLFSGRN-LGKQVAAVAS  124 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~-~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~~~  124 (125)
                      +++++++++|++++. +..+|+++++++||+.+.+++. .||++|++.+
T Consensus       285 ~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          285 RHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             HHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             HHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            999999999999974 5556999999999999999874 5999999865

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.64  E-value=4.9e-17  Score=110.34  Aligned_cols=109  Identities=15%  Similarity=0.074  Sum_probs=88.4

Q ss_pred             ceeeEEEeCCch---HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGG---KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      .|+|+|||++|+   ..++.++++++++|+++.+|....      ...++...++.+++++.|++.+.     .+.++++
T Consensus       242 ~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~  310 (360)
T 1piw_A          242 DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS-----IKELNQL  310 (360)
T ss_dssp             SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC-----HHHHHHH
T ss_pred             cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHHhCCeEEEEEecCC-----HHHHHHH
Confidence            489999999998   578899999999999999987432      00223334567889998876533     3458999


Q ss_pred             HHHHHcCceeeeeecccchhH--HHHHHHHHhcCCCcCeEEEEecC
Q 035717           81 IPHIKWAKIVYIEDTAEGLES--ALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        81 ~~l~~~g~i~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++++|++++.+ .+|++++  +++|++.+.+++..||+||++++
T Consensus       311 ~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          311 LKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             HHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            9999999999887 6699999  99999999998888999999865

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.64  E-value=3.2e-16  Score=107.05  Aligned_cols=109  Identities=21%  Similarity=0.184  Sum_probs=88.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc-ccCCCCCCCcccHHH-HHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS-QYNLDEPKGIHNLTR-LILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+|+|||++|+ ..++.++++++++|+++.+|... ..     ...++... ++.+++++.|++.+.     .+.++++
T Consensus       266 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~  335 (380)
T 1vj0_A          266 RGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD-----PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKT  335 (380)
T ss_dssp             SCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC-----CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHH
T ss_pred             CCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHH
Confidence            389999999997 58899999999999999998743 10     12334555 678899999986543     3458999


Q ss_pred             HHHHHc--CceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           81 IPHIKW--AKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~--g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      ++++++  |++++.+..+|+|+++++|++.+.+++.. |+||+++
T Consensus       336 ~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          336 VSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             HHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            999999  99987776679999999999999988877 9999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.63  E-value=3.4e-15  Score=101.87  Aligned_cols=114  Identities=17%  Similarity=0.156  Sum_probs=86.6

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|+|||++|+ ..++.++++++++ |+++.+|....    ......+...++ +++++.|++.+.+.  ..+.+.++
T Consensus       261 ~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~----~~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~  333 (378)
T 3uko_A          261 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS----GQEISTRPFQLV-TGRVWKGTAFGGFK--SRTQVPWL  333 (378)
T ss_dssp             TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHH-TTCEEEECSGGGCC--HHHHHHHH
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC----CCccccCHHHHh-cCcEEEEEEecCCC--chHHHHHH
Confidence            4589999999998 5789999999996 99999997432    111222333344 48888887654432  24568899


Q ss_pred             HHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           81 IPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ++++++|++++.  +..+|+|+++++||+.+++++.. |+||++++
T Consensus       334 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          334 VEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             HHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             HHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            999999999854  55569999999999999887754 99999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.63  E-value=1.2e-15  Score=103.08  Aligned_cols=109  Identities=17%  Similarity=0.202  Sum_probs=85.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH-HHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL-TRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+|+|||++|+ ..++.++++++++|+++.+|....      ....+. ..++.+++++.|++...    ..+.+++++
T Consensus       235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~  304 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------KVTIDFNNLIIFKALTIYGITGRH----LWETWYTVS  304 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHTTTTTCEEEECCCCC----SHHHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CcccCchHHHHhCCcEEEEecCCC----cHHHHHHHH
Confidence            489999999997 678999999999999999987432      123344 55678899999875432    134589999


Q ss_pred             HHHHcCcee--eeeecccc-hhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           82 PHIKWAKIV--YIEDTAEG-LESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        82 ~l~~~g~i~--~~~~~~~~-l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      +++++|+++  +.+..+|+ ++++++|++.+++ +..||+||+++
T Consensus       305 ~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          305 RLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            999999964  44555699 9999999999987 56899999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.61  E-value=1.2e-15  Score=104.79  Aligned_cols=114  Identities=15%  Similarity=0.177  Sum_probs=86.2

Q ss_pred             ceeeEEEeCCchH---------------HHHHHHHhhccCCEEEEEcccc-ccCCC------CCCCcccHHHHHhcccee
Q 035717            4 EGIDIYFENVGGK---------------MLDAVLINMKIGGQIAVCGMIS-QYNLD------EPKGIHNLTRLILKQVRM   61 (125)
Q Consensus         4 ~g~Dvv~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~~~~------~~~~~~~~~~~~~~~~~~   61 (125)
                      .|+|+|||++|+.               .++.++++++++|+++.+|... .....      .....++...++.+++++
T Consensus       253 ~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i  332 (398)
T 2dph_A          253 PEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRI  332 (398)
T ss_dssp             SCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEE
T ss_pred             CCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEE
Confidence            3899999999975               6899999999999999998752 10000      011133455677889998


Q ss_pred             eeeeecccccchHHHHHHHHHHHHcCcee--e--eeecccchhHHHHHHHHHhcCCCcCeEEEEec
Q 035717           62 EGFLVSDYNHLYPKFLEMIIPHIKWAKIV--Y--IEDTAEGLESALAARVGLFSGRNLGKQVAAVA  123 (125)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~--~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  123 (125)
                      .+++....     +.++++++++++|+++  +  .+..+|+|+++++||+.+.+++. ||+||+++
T Consensus       333 ~g~~~~~~-----~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~  392 (398)
T 2dph_A          333 MTGMAPVT-----NYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPH  392 (398)
T ss_dssp             ECSSCCGG-----GTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTT
T ss_pred             EEeccCcH-----HHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecC
Confidence            88653322     2378899999999998  6  34556999999999999998877 99999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.61  E-value=5e-15  Score=100.91  Aligned_cols=111  Identities=18%  Similarity=0.167  Sum_probs=83.8

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|+|||++|+ ..++.++++++++ |+++.+|....    .....++...+..++ ++.|++...+..   +.++++
T Consensus       259 ~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~~---~~~~~~  330 (373)
T 1p0f_A          259 NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPLLLLTGR-SLKGSVFGGFKG---EEVSRL  330 (373)
T ss_dssp             TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTHHHHTTC-EEEECSGGGCCG---GGHHHH
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC----CCccccCHHHhccCc-eEEeeccCCcCH---HHHHHH
Confidence            3489999999997 5789999999999 99999987432    011123444556677 888876543321   348889


Q ss_pred             HHHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++|++++  .+..+|+++++++||+.+++++ .+|++|++
T Consensus       331 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~kvvi~~  373 (373)
T 1p0f_A          331 VDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQ-GVRSIMIY  373 (373)
T ss_dssp             HHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSS-CSEEEEEC
T ss_pred             HHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCC-cceEEEeC
Confidence            99999999985  3455699999999999998776 47999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.60  E-value=5.7e-16  Score=105.01  Aligned_cols=107  Identities=14%  Similarity=0.040  Sum_probs=86.1

Q ss_pred             eeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHH----HhccceeeeeeecccccchHHHHHH
Q 035717            5 GIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRL----ILKQVRMEGFLVSDYNHLYPKFLEM   79 (125)
Q Consensus         5 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|+|||++|+. .++.++++++++|+++.+|.....     ...++...+    +.+++++.|++.+.     .+.+++
T Consensus       242 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~  311 (357)
T 2b5w_A          242 QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AFEVDAGAFHREMVLHNKALVGSVNSH-----VEHFEA  311 (357)
T ss_dssp             CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CCCCCHHHHHHHHHHTTCEEEECCCCC-----HHHHHH
T ss_pred             CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----CceecHHHHhHHHHhCCeEEEEeccCC-----HHHHHH
Confidence            899999999986 789999999999999999875421     123344555    78899999876543     345899


Q ss_pred             HHHHHHcC--c-eeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           80 IIPHIKWA--K-IVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        80 ~~~l~~~g--~-i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++++|  + +++.+..+|+++++++|++.+   +..||+||++++
T Consensus       312 ~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          312 ATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            99999999  8 577676779999999999988   357999999865

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.60  E-value=1.2e-14  Score=99.01  Aligned_cols=111  Identities=14%  Similarity=0.155  Sum_probs=84.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|+|+|||++|+ ..++.++++++++ |+++.+|....    .....++...++.++ ++.|++.+.+.  ..+.+++++
T Consensus       260 ~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~  332 (374)
T 2jhf_A          260 GGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLV  332 (374)
T ss_dssp             SCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHH
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC----CCccccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHH
Confidence            489999999997 5789999999999 99999987432    011123444566677 88887654331  245689999


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++  .+..+|+++++++|++.+++++ .+|++|++
T Consensus       333 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  374 (374)
T 2jhf_A          333 ADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE-SIRTILTF  374 (374)
T ss_dssp             HHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             HHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCC-cceEEEeC
Confidence            9999999985  3455699999999999998876 47999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.60  E-value=4e-15  Score=102.13  Aligned_cols=115  Identities=15%  Similarity=0.120  Sum_probs=85.8

Q ss_pred             ceeeEEEeCCchH----------------HHHHHHHhhccCCEEEEEccc-cccCCC------CCCCcccHHHHHhccce
Q 035717            4 EGIDIYFENVGGK----------------MLDAVLINMKIGGQIAVCGMI-SQYNLD------EPKGIHNLTRLILKQVR   60 (125)
Q Consensus         4 ~g~Dvv~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~-~~~~~~------~~~~~~~~~~~~~~~~~   60 (125)
                      .|+|+|||++|++                .++.++++++++|+++.+|.. +.....      .....+++..++.++++
T Consensus       253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
T 1kol_A          253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHS  332 (398)
T ss_dssp             SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCE
T ss_pred             CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccE
Confidence            4899999999975                689999999999999999874 211000      00112345556778888


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHcCcee---eeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           61 MEGFLVSDYNHLYPKFLEMIIPHIKWAKIV---YIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~---~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +.+...     ...+.++++++++++|+++   +.+..+|+++|+++||+.+.+++. ||+||+++.
T Consensus       333 ~~g~~~-----~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          333 FHTGQT-----PVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             EEESSC-----CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             EEeccc-----ChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence            877532     1234578899999999998   334566999999999999998877 999998753

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.60  E-value=1.1e-14  Score=99.10  Aligned_cols=112  Identities=18%  Similarity=0.226  Sum_probs=85.0

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|+|||++|+ ..++.++++++++ |+++.+|....    ......+...++.++ ++.|++.+.+.  ..+.++++
T Consensus       258 ~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~  330 (373)
T 2fzw_A          258 DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGR-TWKGTAFGGWK--SVESVPKL  330 (373)
T ss_dssp             TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHH
T ss_pred             CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC----CceeeeCHHHHhcCC-EEEEeccCCCC--cHHHHHHH
Confidence            3489999999997 5789999999999 99999987432    011123444566677 88887654321  24568999


Q ss_pred             HHHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           81 IPHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        81 ~~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      ++++++|++++  .+..+|+|+++++|++.+++++. +|++|++
T Consensus       331 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          331 VSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             HHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             HHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            99999999985  34556999999999999988764 7999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.60  E-value=4.3e-15  Score=101.24  Aligned_cols=123  Identities=6%  Similarity=-0.017  Sum_probs=87.0

Q ss_pred             CCceeeEEEeCCch-HHHHHHHHhh-ccCCEEEEEccccccCCCCCCCc---ccHHHHHhccceeeeeeeccccc----c
Q 035717            2 FPEGIDIYFENVGG-KMLDAVLINM-KIGGQIAVCGMISQYNLDEPKGI---HNLTRLILKQVRMEGFLVSDYNH----L   72 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~   72 (125)
                      ++.++|++|||+|+ ..++.+++++ +++|+++.+|.............   .....++.+++++.|++......    .
T Consensus       228 t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~  307 (371)
T 3gqv_A          228 TKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQF  307 (371)
T ss_dssp             TTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHH
T ss_pred             ccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHH
Confidence            34579999999998 5689999999 59999999986432100000011   11234567889998875443221    1


Q ss_pred             hHHHHHHHHHHHHcCceeeeeecc--cchhHHHHHHHHHhcCCCcCe-EEEEecC
Q 035717           73 YPKFLEMIIPHIKWAKIVYIEDTA--EGLESALAARVGLFSGRNLGK-QVAAVAS  124 (125)
Q Consensus        73 ~~~~~~~~~~l~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~gk-vvi~~~~  124 (125)
                      ..+.++++++++++|++++....+  |+++++++||+.+.+++..|| +|+++++
T Consensus       308 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          308 GEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            234566889999999999886655  899999999999999988885 6666644

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.59  E-value=1.7e-14  Score=98.25  Aligned_cols=110  Identities=17%  Similarity=0.156  Sum_probs=84.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|+|+|||++|+ ..++.++++++++ |+++.+|....     .....+...++.++ ++.|++.+.+.  ..+.+++++
T Consensus       261 ~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~  332 (374)
T 1cdo_A          261 GGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMV  332 (374)
T ss_dssp             SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-----CCcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHH
Confidence            479999999996 5789999999999 99999987432     11123445566677 88887654321  245689999


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++  .+..+|+|+|+++||+.+++++. +|++|++
T Consensus       333 ~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          333 KAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             HHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            9999999985  34556999999999999988764 7999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.59  E-value=1.4e-14  Score=98.71  Aligned_cols=109  Identities=17%  Similarity=0.203  Sum_probs=84.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|+|+|||++|+ ..++.++++++++ |+++.+|...     . ...++...++.++ ++.|++.+.+.  ..+.+++++
T Consensus       264 ~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~-----~-~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~  334 (376)
T 1e3i_A          264 GGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV-----D-EMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLV  334 (376)
T ss_dssp             SCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS-----S-EEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHH
T ss_pred             CCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC-----C-ccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHH
Confidence            489999999997 5789999999999 9999998722     1 1234555566777 88887643321  245689999


Q ss_pred             HHHHcCceee--eeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           82 PHIKWAKIVY--IEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        82 ~l~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +++++|++++  .+..+|+|+++++|++.+++++ .+|++|++
T Consensus       335 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          335 SDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             HHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            9999999985  3455699999999999998876 57999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.59  E-value=3.4e-15  Score=101.03  Aligned_cols=112  Identities=13%  Similarity=0.059  Sum_probs=83.3

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccH--HHHHhccceeeeeeecccccchHHHHHHH
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL--TRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+|+|||++|+ ..++.++++|+++|+++.+|.....   . ....+.  .....++.++.+++...    ....++++
T Consensus       234 ~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~---~-~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~  305 (352)
T 3fpc_A          234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG---D-NIDIPRSEWGVGMGHKHIHGGLCPG----GRLRMERL  305 (352)
T ss_dssp             CCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSC---S-EEEEETTTTGGGTBCEEEEEBCCCC----HHHHHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCC---C-ceecchhHhhhhccccEEEEeeccC----chhHHHHH
Confidence            489999999998 5799999999999999999875421   1 111111  11234677777765422    23458999


Q ss_pred             HHHHHcCceeee--eecccc-hhHHHHHHHHHhcCCC-cCeEEEEec
Q 035717           81 IPHIKWAKIVYI--EDTAEG-LESALAARVGLFSGRN-LGKQVAAVA  123 (125)
Q Consensus        81 ~~l~~~g~i~~~--~~~~~~-l~~~~~a~~~~~~~~~-~gkvvi~~~  123 (125)
                      ++++++|++++.  +..+|+ |+++++||+.+.+++. .+|+||+++
T Consensus       306 ~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          306 IDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             HHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             HHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            999999999975  445698 9999999999998654 489999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.57  E-value=3e-15  Score=101.75  Aligned_cols=109  Identities=8%  Similarity=0.060  Sum_probs=85.6

Q ss_pred             ceeeEEEeCCchH-HH-HHHHHhhccCCEEEEEccccccCCCCCCCcccHHH---HHhccceeeeeeecccccchHHHHH
Q 035717            4 EGIDIYFENVGGK-ML-DAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTR---LILKQVRMEGFLVSDYNHLYPKFLE   78 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      .|+|++||++|+. .+ +.++++++++|+++.+|....     ....++...   ++.+++++.|++.+.     .+.++
T Consensus       245 ~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~  314 (366)
T 2cdc_A          245 GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS-----GSVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQ  314 (366)
T ss_dssp             CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS-----CEEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC-----CccccChhhhHHHHhcCcEEEEecCCC-----HHHHH
Confidence            4799999999985 77 999999999999999987432     112334455   778899999875432     34589


Q ss_pred             HHHHHHHcCce------eeeeecccchhHHHHHHHH--HhcCCCcCeEEEEec
Q 035717           79 MIIPHIKWAKI------VYIEDTAEGLESALAARVG--LFSGRNLGKQVAAVA  123 (125)
Q Consensus        79 ~~~~l~~~g~i------~~~~~~~~~l~~~~~a~~~--~~~~~~~gkvvi~~~  123 (125)
                      ++++++++|++      ++.+..+|+++++++||+.  ++ ++..||+||+++
T Consensus       315 ~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~-~~~~gKvvi~~~  366 (366)
T 2cdc_A          315 QAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREK-EHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCC-CTTCCEEEEECC
T ss_pred             HHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhh-cCCceEEEEecC
Confidence            99999999994      4656667999999999999  55 567899999864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.57  E-value=4.2e-15  Score=102.29  Aligned_cols=106  Identities=11%  Similarity=0.071  Sum_probs=83.3

Q ss_pred             ceeeEEEeCCchH--HHHHHHHhh----ccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHH
Q 035717            4 EGIDIYFENVGGK--MLDAVLINM----KIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (125)
                      +|+|+|||++|+.  .+..++++|    +++|+++.+|....      ...++...+..+++++.|++.....    ..+
T Consensus       281 ~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~~----~~~  350 (404)
T 3ip1_A          281 LGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA------KIPLTGEVFQVRRAQIVGSQGHSGH----GTF  350 (404)
T ss_dssp             CCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS------CEEECHHHHHHTTCEEEECCCCCST----THH
T ss_pred             CCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC------CCcccHHHHhccceEEEEecCCCch----HHH
Confidence            4899999999987  677787888    99999999997542      1245667788899999998653322    247


Q ss_pred             HHHHHHHHcCceeee--eecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           78 EMIIPHIKWAKIVYI--EDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        78 ~~~~~l~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +++++++++| +++.  +..+|+|+++++||+.+.    .||+||++++
T Consensus       351 ~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          351 PRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             HHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             HHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            8999999999 7653  445699999999999987    5788888754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.47  E-value=8.6e-14  Score=94.89  Aligned_cols=119  Identities=17%  Similarity=0.143  Sum_probs=80.7

Q ss_pred             ceeeEEEeCCchH--HHHHHHHhhccCCEEEEEccccccCCCCCCCcccH----HHHHhccc-ee-eeeeec-ccccchH
Q 035717            4 EGIDIYFENVGGK--MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNL----TRLILKQV-RM-EGFLVS-DYNHLYP   74 (125)
Q Consensus         4 ~g~Dvv~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~~~~~-~~-~~~~~~-~~~~~~~   74 (125)
                      .|+|++|||+|+.  .+..++++++++|+++.+|.....+..........    ..++.+++ ++ .+..+. .+.....
T Consensus       247 ~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  326 (375)
T 2vn8_A          247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASG  326 (375)
T ss_dssp             CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCH
Confidence            4799999999986  35889999999999999986432100000000000    12223333 22 232221 1111234


Q ss_pred             HHHHHHHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEe
Q 035717           75 KFLEMIIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAV  122 (125)
Q Consensus        75 ~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  122 (125)
                      +.++++++++++|++++.+..+|+++++++|++.+.+++..||+||++
T Consensus       327 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          327 PCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            568999999999999988777799999999999999988889999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.46  E-value=1.4e-13  Score=110.50  Aligned_cols=116  Identities=19%  Similarity=0.219  Sum_probs=89.2

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc----cchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN----HLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   79 (125)
                      +|+|+|||++|++.+..+++|++++|+++.+|......    . ......++.+++++.+++.....    ....+.++.
T Consensus      1739 ~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~----~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~ 1813 (2512)
T 2vz8_A         1739 KGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN----N-HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSEL 1813 (2512)
T ss_dssp             CCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT----T-CEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHH
T ss_pred             CCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc----c-CcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHH
Confidence            58999999999989999999999999999998643211    0 11122346688898887654321    223455666


Q ss_pred             HHHHHHcCceeeeeecccchhHHHHHHHHHhcCCCcCeEEEEecC
Q 035717           80 IIPHIKWAKIVYIEDTAEGLESALAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      +.+++.+|.+++.+..+|+++++++|++.+.+++..||+||++++
T Consensus      1814 l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1814 LKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             HHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred             HHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence            666777899998777779999999999999999989999999854

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.41  E-value=5.7e-14  Score=95.97  Aligned_cols=113  Identities=15%  Similarity=0.139  Sum_probs=82.9

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhcc-----C-----------CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeee
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKI-----G-----------GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLV   66 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~-----~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (125)
                      +|+|++|||+|+. ..+.+++++++     +           |+++.+|..+..       +.+...++.+++++.|+++
T Consensus       239 ~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~~~~~~~~~i~g~~~  311 (379)
T 3iup_A          239 TGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFNRNFGMAWGMGGWLL  311 (379)
T ss_dssp             HCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEECCCSCSCEEEEECCH
T ss_pred             CCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------ccccccccccceEEEEEEe
Confidence            3799999999974 66888888864     4           666666653311       1112233567889999876


Q ss_pred             cccc-----cchHHHHHHHHHHHHcCceeeeeecccchhHH--HHHHHHHhcCCCcCeEEEEecC
Q 035717           67 SDYN-----HLYPKFLEMIIPHIKWAKIVYIEDTAEGLESA--LAARVGLFSGRNLGKQVAAVAS  124 (125)
Q Consensus        67 ~~~~-----~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvi~~~~  124 (125)
                      ..+.     ....+.++++.+++.+ .+++.+..+|+++++  ++|++.+.+++..||+||+++.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          312 FPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             eeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            5441     2234567888888888 588877778999999  9999999999999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.80  E-value=9.1e-09  Score=64.14  Aligned_cols=87  Identities=17%  Similarity=0.263  Sum_probs=60.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc----cccchHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD----YNHLYPKFLEM   79 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   79 (125)
                      +++|+++|++|+..+..++++++++|+++.+|......    ....+.. .+.+++++.++....    ......+.+++
T Consensus       106 ~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (198)
T 1pqw_A          106 YGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGLA-ALAKSASFSVVDLDLNLKLQPARYRQLLQH  180 (198)
T ss_dssp             CCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEGG-GGTTTCEEEECCHHHHHHHCHHHHHHHHHH
T ss_pred             CCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCChh-HhcCCcEEEEEehHHhhccCHHHHHHHHHH
Confidence            47999999999888999999999999999998754211    1112221 345777877653311    11123567899


Q ss_pred             HHHHHHcCceeeeeec
Q 035717           80 IIPHIKWAKIVYIEDT   95 (125)
Q Consensus        80 ~~~l~~~g~i~~~~~~   95 (125)
                      +++++++|++++.+..
T Consensus       181 ~~~l~~~g~l~~~~~~  196 (198)
T 1pqw_A          181 ILQHVADGKLEVLPVT  196 (198)
T ss_dssp             HHHHHHTTSSCCCCCC
T ss_pred             HHHHHHcCCccCCCCC
Confidence            9999999999986543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.39  E-value=0.0065  Score=41.24  Aligned_cols=84  Identities=11%  Similarity=-0.016  Sum_probs=48.1

Q ss_pred             eeeEEEeCCchHH-------HHHHHHhhccCCEEEEEccccccCCCC-CCCcccHHHHHhccceeeeeeec--cccc---
Q 035717            5 GIDIYFENVGGKM-------LDAVLINMKIGGQIAVCGMISQYNLDE-PKGIHNLTRLILKQVRMEGFLVS--DYNH---   71 (125)
Q Consensus         5 g~Dvv~d~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~---   71 (125)
                      ++|+|++|++.+.       ....++.++++|+++.++...+.+-+. .....+...+..+++++.+....  ..+.   
T Consensus       230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s  309 (361)
T 1pjc_A          230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTAT  309 (361)
T ss_dssp             TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHH
T ss_pred             CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHH
Confidence            6899999997543       567889999999999998643211000 00111211233456666654321  1111   


Q ss_pred             -ch-HHHHHHHHHHHHcCc
Q 035717           72 -LY-PKFLEMIIPHIKWAK   88 (125)
Q Consensus        72 -~~-~~~~~~~~~l~~~g~   88 (125)
                       .. ...+..+++++++|.
T Consensus       310 ~~~~~~~~~~l~~l~~~G~  328 (361)
T 1pjc_A          310 QALNNSTLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHhCCc
Confidence             11 344677888888884

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=94.25  E-value=0.0019  Score=45.70  Aligned_cols=103  Identities=11%  Similarity=0.045  Sum_probs=57.8

Q ss_pred             ceeeEEEeCCchHH-HH-HHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccc---eeeeee-ecccccchHHHH
Q 035717            4 EGIDIYFENVGGKM-LD-AVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQV---RMEGFL-VSDYNHLYPKFL   77 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~   77 (125)
                      .++|+|++++|... +. ..++.++++|+++.+|....        .++...+..+.+   ++.+.. ...++.     +
T Consensus       328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--------eId~~aL~~~aL~~~~I~~~ldv~~~~~-----~  394 (494)
T 3ce6_A          328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--------EIDMAGLERSGATRVNVKPQVDLWTFGD-----T  394 (494)
T ss_dssp             GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--------GBCHHHHHHTTCEEEEEETTEEEEECTT-----T
T ss_pred             hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--------ccCHHHHHHhhhccceEEEEEEEeecCC-----c
Confidence            36899999998643 44 78899999999999986321        123444444332   444422 111111     1


Q ss_pred             HHHHHHHHcCcee------eee----ecccchhHHHHHHHHHhcCCCcCeEEE
Q 035717           78 EMIIPHIKWAKIV------YIE----DTAEGLESALAARVGLFSGRNLGKQVA  120 (125)
Q Consensus        78 ~~~~~l~~~g~i~------~~~----~~~~~l~~~~~a~~~~~~~~~~gkvvi  120 (125)
                      ...+.++.+|++.      |.+    ...| ++++.++++.+.+++..++.|+
T Consensus       395 ~~~l~LL~~grlvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V~  446 (494)
T 3ce6_A          395 GRSIIVLSEGRLLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEVY  446 (494)
T ss_dssp             CCEEEEEGGGSCHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSEE
T ss_pred             chHHHHHhCCCEEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCCCCEEE
Confidence            1112344555553      111    1124 5688888888887665555443

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=93.93  E-value=0.049  Score=37.02  Aligned_cols=84  Identities=13%  Similarity=0.005  Sum_probs=42.3

Q ss_pred             eeeEEEeCCchHH-------HHHHHHhhccCCEEEEEccccccCCCCC-CCcccHHHHHhccceeeeeeec--cccc---
Q 035717            5 GIDIYFENVGGKM-------LDAVLINMKIGGQIAVCGMISQYNLDEP-KGIHNLTRLILKQVRMEGFLVS--DYNH---   71 (125)
Q Consensus         5 g~Dvv~d~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~---   71 (125)
                      ++|+|++|+|...       ....++.++++|+++.+|...+...+.. +.+.+...+..+++.+.++...  ..+.   
T Consensus       229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as  308 (369)
T 2eez_A          229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTST  308 (369)
T ss_dssp             HCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred             CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence            6899999998543       5788999999999999986432110000 0111111223456666554311  1111   


Q ss_pred             -c-hHHHHHHHHHHHHcCc
Q 035717           72 -L-YPKFLEMIIPHIKWAK   88 (125)
Q Consensus        72 -~-~~~~~~~~~~l~~~g~   88 (125)
                       . ....+..+.+++.+|.
T Consensus       309 ~~~~~~~~~~l~~l~~~g~  327 (369)
T 2eez_A          309 FALTNQTLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCh
Confidence             0 1344667778887774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=90.67  E-value=0.047  Score=37.34  Aligned_cols=33  Identities=21%  Similarity=0.245  Sum_probs=26.7

Q ss_pred             eeeEEEeCC---chHH----HHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENV---GGKM----LDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~---g~~~----~~~~~~~l~~~G~~v~~g~~   37 (125)
                      ++|+|++++   |.+.    ....++.++++|.++.++..
T Consensus       257 ~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~  296 (384)
T 1l7d_A          257 KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  296 (384)
T ss_dssp             TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecC
Confidence            689999999   5322    36789999999999999864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=86.14  E-value=0.24  Score=33.78  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=27.4

Q ss_pred             eeeEEEeCCchHH-------HHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGGKM-------LDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~~~-------~~~~~~~l~~~G~~v~~g~~   37 (125)
                      ++|+|++|++.+.       ....++.++++|+++.+|..
T Consensus       231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecC
Confidence            5899999987542       57889999999999999854

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=85.68  E-value=0.88  Score=28.48  Aligned_cols=33  Identities=15%  Similarity=0.103  Sum_probs=26.7

Q ss_pred             ceeeEEEeCCch--HHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGG--KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~--~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      .++|+|+...+.  ..+..+.++|+++|+++....
T Consensus       157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            479999987763  468899999999999988743

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=85.18  E-value=0.96  Score=27.18  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=22.9

Q ss_pred             ceeeEEE-----eCCch-------------HHHHHHHHhhccCCEEEEE
Q 035717            4 EGIDIYF-----ENVGG-------------KMLDAVLINMKIGGQIAVC   34 (125)
Q Consensus         4 ~g~Dvv~-----d~~g~-------------~~~~~~~~~l~~~G~~v~~   34 (125)
                      ..+|+|+     ++++.             ..+..+.++|+++|+++..
T Consensus        96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (196)
T 2nyu_A           96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK  144 (196)
T ss_dssp             GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            3699998     33332             2466788999999999875

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=84.82  E-value=1.1  Score=29.78  Aligned_cols=33  Identities=6%  Similarity=0.039  Sum_probs=25.5

Q ss_pred             ceeeEEEeCCch----HHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGG----KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+-....    ..++...+.|+|+|+++....
T Consensus       187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            468999865443    368899999999999997643

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=82.31  E-value=2.1  Score=25.93  Aligned_cols=33  Identities=24%  Similarity=0.252  Sum_probs=25.6

Q ss_pred             ceeeEEEeCCc----hHHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVG----GKMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g----~~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+....    ...+..+.+.|+++|+++....
T Consensus       107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            45899987654    2367889999999999998643

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=81.98  E-value=1.1  Score=26.93  Aligned_cols=33  Identities=21%  Similarity=0.206  Sum_probs=24.5

Q ss_pred             ceeeEEEeCCch----------------HHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGG----------------KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+-..+-                ..+..+.++|+++|+++....
T Consensus        92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            568998854321                368889999999999987643

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=81.76  E-value=1.9  Score=25.25  Aligned_cols=33  Identities=18%  Similarity=0.372  Sum_probs=25.1

Q ss_pred             ceeeEEEeCCch---HHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGG---KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~---~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+...+.   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            568999865543   268899999999999987643

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=81.67  E-value=0.7  Score=29.45  Aligned_cols=33  Identities=12%  Similarity=0.080  Sum_probs=25.9

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+.......+....++|+|+|+++....
T Consensus       147 ~~fD~v~~~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          147 TSMDAIIRIYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             TCEEEEEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             CceeEEEEeCChhhHHHHHHhcCCCcEEEEEEc
Confidence            469999964444568899999999999988743

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=80.28  E-value=2.4  Score=24.60  Aligned_cols=33  Identities=15%  Similarity=0.225  Sum_probs=23.8

Q ss_pred             ceeeEEEeC-----Cc-------------hHHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFEN-----VG-------------GKMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~-----~g-------------~~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ..+|+|+..     .+             ...+..+.++|+++|+++....
T Consensus        87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            468999862     22             2346788899999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	125
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	3e-10
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	9e-10
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	5e-07
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-05
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-05
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	6e-05
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	3e-04

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.7 bits (125), Expect = 3e-10
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 5   GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDE----PKGIHNLTRLILKQVR 60
           G+D+YF+NVGG + + V+  M     I +CG ISQYN D     P           + + 
Sbjct: 100 GVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNIT 159

Query: 61  MEGFLVSDYNHLYPKFLEMIIPHIK 85
            E F V +Y   +   +  +    K
Sbjct: 160 RERFTVLNYKDKFEPGILQLSQWFK 184

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 51.6 bits (122), Expect = 9e-10
 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYN-LDEPKGIHNLTRLILKQV 59
             P+G D YF+NVGG+ L+ VL  MK  G+IA+CG IS YN +D+     +   +I KQ+
Sbjct: 94  ASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQL 153

Query: 60  RMEGFLVSDY-NHLYPKFLEMIIPHIK 85
           R+EGF+V  +   +  K L  ++  + 
Sbjct: 154 RIEGFIVYRWQGDVREKALRDLMKWVL 180

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 44.2 bits (103), Expect = 5e-07
 Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 5/82 (6%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRME 62
                +    VGGK    +   +   G +   G +S   +  P         I K     
Sbjct: 105 GGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTS-----LYIFKNFTSA 159

Query: 63  GFLVSDYNHLYPKFLEMIIPHI 84
           GF V++      +     +  I
Sbjct: 160 GFWVTELLKNNKELKTSTLNQI 181

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.6 bits (91), Expect = 2e-05
 Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 3   PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRME 62
             G+D+   ++ G+ +   +  +  GG+    G    Y  D   G+  L +     V   
Sbjct: 92  GYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-DASLGLAALAKSASFSVVDL 150

Query: 63  GFLVSDYNHLYPKFLEMIIPHIKWAKI 89
              +      Y + L+ I+ H+   K+
Sbjct: 151 DLNLKLQPARYRQLLQHILQHVADGKL 177

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 39.5 bits (91), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 4   EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEG 63
           +      + VG K+L  VL  M  GG +A CG+   +          +   IL+ VR++G
Sbjct: 95  QVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFT-----LPTTVMPFILRNVRLQG 149

Query: 64  F 64
            
Sbjct: 150 V 150

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 38.3 bits (88), Expect = 6e-05
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
              +      + VGG+ L  VL  M+ GG +AV G+     +        +   IL+ V 
Sbjct: 94  LDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVP-----TTVHPFILRGVS 148

Query: 61  MEG 63
           + G
Sbjct: 149 LLG 151

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 1   CFPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVR 60
              +      + VGGK L ++L  ++ GG +AV G+     +        +   IL+ V 
Sbjct: 86  LSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVP-----ATVYPFILRGVS 140

Query: 61  MEGF 64
           + G 
Sbjct: 141 LLGI 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.53
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.52
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.44
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.34
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.33
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.3
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.3
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.28
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.28
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.27
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.15
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.14
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.13
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.12
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.11
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.06
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.05
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.04
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.02
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	98.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.83
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.83
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	98.78
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.76
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.75
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	98.73
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	98.61
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.42
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.4
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.23
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.56
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.99
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.79
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.28
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.46
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.22
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.69
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.18
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.07
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.78
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.62
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	80.95
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	80.72
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	80.2

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=1.7e-14  Score=88.32  Aligned_cols=87  Identities=31%  Similarity=0.492  Sum_probs=63.2

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCC-cc---cHHHHHhccceeeeeeecccccchHHHH
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKG-IH---NLTRLILKQVRMEGFLVSDYNHLYPKFL   77 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (125)
                      +++|+|+|||++|++.++.++++++++||++.+|..++++...+.. ..   ....+..+++++.|+.+.++.+..++.+
T Consensus        97 ~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~~~~~~~~~~~e~~  176 (187)
T d1vj1a2          97 CPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGI  176 (187)
T ss_dssp             CTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEECCGGGCGGGHHHHH
T ss_pred             hccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEeEecchHHHHHHHH
Confidence            5789999999999999999999999999999999866543322211 11   1233557889999988877777778889


Q ss_pred             HHHHHHHHcCc
Q 035717           78 EMIIPHIKWAK   88 (125)
Q Consensus        78 ~~~~~l~~~g~   88 (125)
                      +++.+++++|+
T Consensus       177 ~~l~~~i~~Gk  187 (187)
T d1vj1a2         177 LQLSQWFKEGK  187 (187)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHCcC
Confidence            99999999986

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.52  E-value=2.7e-14  Score=87.08  Aligned_cols=86  Identities=38%  Similarity=0.611  Sum_probs=69.1

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCC-CCcccHHHHHhccceeeeeeeccccc-chHHHHHH
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEP-KGIHNLTRLILKQVRMEGFLVSDYNH-LYPKFLEM   79 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (125)
                      .++|+|+|||++|++.+++++++++++|+++.+|..+.++...+ +..+++..++.+++++.|++..++.. ..++.+++
T Consensus        95 ~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~~~~~~~~~~  174 (182)
T d1v3va2          95 SPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRD  174 (182)
T ss_dssp             CTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCHHHHHHHHHH
T ss_pred             hcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccChHHHHHHHHH
Confidence            46799999999999999999999999999999997665433221 22356677889999999998777643 35678899


Q ss_pred             HHHHHHcC
Q 035717           80 IIPHIKWA   87 (125)
Q Consensus        80 ~~~l~~~g   87 (125)
                      +.+++++|
T Consensus       175 l~~~i~~G  182 (182)
T d1v3va2         175 LMKWVLEG  182 (182)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhCc
Confidence            99999887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.44  E-value=1.3e-13  Score=84.51  Aligned_cols=81  Identities=21%  Similarity=0.229  Sum_probs=65.3

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc----cchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN----HLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   78 (125)
                      +.++|++||++|++.+..++++|+++|++|.+|..+.     .+..++...++.|++++.|+++..+.    +...+.++
T Consensus       105 g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~~~  179 (189)
T d1gu7a2         105 GGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN  179 (189)
T ss_dssp             TCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHH
T ss_pred             cCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccC-----CCccCcHHHHHHCCcEEEEEEehHhhhhCHHHHHHHHH
Confidence            4679999999999999999999999999999997553     12345667788899999999776542    23457789


Q ss_pred             HHHHHHHcCc
Q 035717           79 MIIPHIKWAK   88 (125)
Q Consensus        79 ~~~~l~~~g~   88 (125)
                      ++.+++++|+
T Consensus       180 ~l~~l~~~Gk  189 (189)
T d1gu7a2         180 QIIAWYEEGK  189 (189)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHcCC
Confidence            9999999986

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.34  E-value=2.8e-12  Score=77.47  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=64.2

Q ss_pred             CCceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            2 FPEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++.|+|+||||+|.. .++.++++++++|+++.+|....    .....++...++.+++++.|++.+++.  .++.++++
T Consensus        93 t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~~g~~~--~~~~~~~~  166 (174)
T d1f8fa2          93 TDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPEL  166 (174)
T ss_dssp             TTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHH
T ss_pred             cCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEEecCCC--hHHHHHHH
Confidence            467899999999964 68999999999999999987432    112345777888999999998765542  34568999


Q ss_pred             HHHHHcCc
Q 035717           81 IPHIKWAK   88 (125)
Q Consensus        81 ~~l~~~g~   88 (125)
                      ++++++|+
T Consensus       167 ~~l~~~Gk  174 (174)
T d1f8fa2         167 VRLYQQGK  174 (174)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHcCC
Confidence            99999986

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.33  E-value=1e-12  Score=79.30  Aligned_cols=74  Identities=22%  Similarity=0.309  Sum_probs=61.6

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|+|||++|+. .++.++++++++|+++.+|...       ...++...++.+++++.|++.+++.+     +++++
T Consensus        98 ~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~~~~d-----~~~~l  165 (172)
T d1h2ba2          98 GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVGNYVE-----LHELV  165 (172)
T ss_dssp             TCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSCCHHH-----HHHHH
T ss_pred             CCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEecCHHH-----HHHHH
Confidence            56899999999975 6899999999999999998632       12456677889999999998766544     89999


Q ss_pred             HHHHcCc
Q 035717           82 PHIKWAK   88 (125)
Q Consensus        82 ~l~~~g~   88 (125)
                      +++++|+
T Consensus       166 ~l~~~GK  172 (172)
T d1h2ba2         166 TLALQGK  172 (172)
T ss_dssp             HHHHTTS
T ss_pred             HHHHcCC
Confidence            9999986

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.30  E-value=1.2e-12  Score=79.56  Aligned_cols=85  Identities=15%  Similarity=0.225  Sum_probs=63.7

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc----ccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY----NHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   78 (125)
                      ++|+|++||++|++.++.++++|+++|+++.+|..+..+.    .... ...+.+++++.++.....    +....+.++
T Consensus        92 ~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (183)
T d1pqwa_          92 GYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYAD----ASLG-LAALAKSASFSVVDLDLNLKLQPARYRQLLQ  166 (183)
T ss_dssp             TCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTT----CEEE-GGGGTTTCEEEECCHHHHHHHCHHHHHHHHH
T ss_pred             CCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCC----cccc-hHHHhCCcEEEEEEccceeccCHHHHHHHHH
Confidence            4799999999999999999999999999999997654221    1112 223467888888754332    223457789


Q ss_pred             HHHHHHHcCceeee
Q 035717           79 MIIPHIKWAKIVYI   92 (125)
Q Consensus        79 ~~~~l~~~g~i~~~   92 (125)
                      ++.+++++|+++|.
T Consensus       167 ~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         167 HILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHTTSSCCC
T ss_pred             HHHHHHHCCCCcee
Confidence            99999999999974

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.30  E-value=1.2e-12  Score=78.77  Aligned_cols=75  Identities=15%  Similarity=0.185  Sum_probs=61.5

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.++|++|||+|+. .++.++++++++|+++.+|....      ..+++...++.+++++.|++.+.+     +.+++++
T Consensus        95 ~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs~~~~~-----~d~~~~l  163 (170)
T d1jvba2          95 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGSLVGNQ-----SDFLGIM  163 (170)
T ss_dssp             TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEECCSCCH-----HHHHHHH
T ss_pred             cccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEEecCCH-----HHHHHHH
Confidence            56899999999975 68999999999999999987542      234567778899999999887554     3489999


Q ss_pred             HHHHcCc
Q 035717           82 PHIKWAK   88 (125)
Q Consensus        82 ~l~~~g~   88 (125)
                      +++++|+
T Consensus       164 ~lv~~GK  170 (170)
T d1jvba2         164 RLAEAGK  170 (170)
T ss_dssp             HHHHTTS
T ss_pred             HHHHcCC
Confidence            9999986

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=7.8e-12  Score=75.22  Aligned_cols=76  Identities=14%  Similarity=0.224  Sum_probs=61.3

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.|+|+||||+|++ .++.++++++++|+++.+|....      ...+++..++.|++++.|++.+  ..    .+++++
T Consensus        95 g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs~~~--~~----~~~~al  162 (171)
T d1pl8a2          95 GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFRY--CN----TWPVAI  162 (171)
T ss_dssp             TSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCSC--SS----CHHHHH
T ss_pred             CCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEEeCC--Hh----HHHHHH
Confidence            45899999999975 68999999999999999997542      2245677888999999998643  22    278899


Q ss_pred             HHHHcCcee
Q 035717           82 PHIKWAKIV   90 (125)
Q Consensus        82 ~l~~~g~i~   90 (125)
                      +++++|++.
T Consensus       163 ~li~~gkid  171 (171)
T d1pl8a2         163 SMLASKSVN  171 (171)
T ss_dssp             HHHHTTSCC
T ss_pred             HHHHcCCCC
Confidence            999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.28  E-value=4.5e-12  Score=76.69  Aligned_cols=82  Identities=21%  Similarity=0.222  Sum_probs=59.6

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .++|+|+|||++|++.++.++++|+++||++.+|..++.     ...++...++.|++++.|+.....+   .+...++.
T Consensus        95 ~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~Gv~~~~~~---~~~~~~~~  166 (176)
T d1xa0a2          95 DKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCP---MDLRLRIW  166 (176)
T ss_dssp             CSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCC---HHHHHHHH
T ss_pred             hccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEEEeCCcCC---HHHHHHHH
Confidence            467999999999999999999999999999999986532     2345677788999999997543322   11233333


Q ss_pred             HHHHcCceeee
Q 035717           82 PHIKWAKIVYI   92 (125)
Q Consensus        82 ~l~~~g~i~~~   92 (125)
                      +.+ .|+++|.
T Consensus       167 ~~l-ag~lkP~  176 (176)
T d1xa0a2         167 ERL-AGDLKPD  176 (176)
T ss_dssp             HHH-HTTTCCC
T ss_pred             HHH-hcccCCC
Confidence            333 3777763

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.27  E-value=9.9e-12  Score=74.61  Aligned_cols=74  Identities=12%  Similarity=0.179  Sum_probs=59.5

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.|+|+||||+|++ .++.++++++++|+++.+|....      ...+++..++.|++++.|++.+. .+     +++++
T Consensus        96 g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs~~~~-~~-----~~~ai  163 (170)
T d1e3ja2          96 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFRYC-ND-----YPIAL  163 (170)
T ss_dssp             SSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCSCS-SC-----HHHHH
T ss_pred             ccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEEECCH-HH-----HHHHH
Confidence            56899999999975 68999999999999999997542      12456777889999999986432 23     78889


Q ss_pred             HHHHcCc
Q 035717           82 PHIKWAK   88 (125)
Q Consensus        82 ~l~~~g~   88 (125)
                      +++++|+
T Consensus       164 ~li~~Gk  170 (170)
T d1e3ja2         164 EMVASGR  170 (170)
T ss_dssp             HHHHTTS
T ss_pred             HHHHcCC
Confidence            9999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=4.2e-11  Score=72.14  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=55.6

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|+|++||++|++.++.++++++++|+++.+|..+       ..+.+...++.+++++.|++++...   .+.++++++
T Consensus        95 ~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~-------~~~~~~~~~~~k~~~i~g~~~~~~~---~~~~~~~~~  164 (174)
T d1yb5a2          95 EKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSST---KEEFQQYAA  164 (174)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGCC---HHHHHHHHH
T ss_pred             cCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC-------CCCCCHHHHHHCCCEEEEEEecCCC---HHHHHHHHH
Confidence            468999999999999999999999999999998633       1234566778899999998765432   223555555


Q ss_pred             HHHc
Q 035717           83 HIKW   86 (125)
Q Consensus        83 l~~~   86 (125)
                      ++++
T Consensus       165 ~l~~  168 (174)
T d1yb5a2         165 ALQA  168 (174)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.14  E-value=1e-11  Score=74.77  Aligned_cols=62  Identities=21%  Similarity=0.275  Sum_probs=46.1

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccc
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYN   70 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (125)
                      ++|+|+|||++| +.+++++++++++|+++.+|..++.     ....+...++.|++++.|+++..+.
T Consensus        89 ~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~~~~  150 (171)
T d1iz0a2          89 WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPLL  150 (171)
T ss_dssp             TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCcChh
Confidence            468999999988 5789999999999999999975531     2234566788999999999876554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=1.4e-11  Score=73.94  Aligned_cols=76  Identities=17%  Similarity=0.284  Sum_probs=58.8

Q ss_pred             ceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHH
Q 035717            4 EGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIP   82 (125)
Q Consensus         4 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|++||++|++ .++.++++++++|+++.+|....     +...++...++.+++++.|++.+...+     ++++++
T Consensus        92 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~~~d-----~~e~l~  161 (168)
T d1uufa2          92 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGGIPE-----TQEMLD  161 (168)
T ss_dssp             TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCCHHH-----HHHHHH
T ss_pred             CCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecCHHH-----HHHHHH
Confidence            5899999999975 69999999999999999987542     222346677888999999998765443     888999


Q ss_pred             HHHcCce
Q 035717           83 HIKWAKI   89 (125)
Q Consensus        83 l~~~g~i   89 (125)
                      ++.+++|
T Consensus       162 l~a~~~I  168 (168)
T d1uufa2         162 FCAEHGI  168 (168)
T ss_dssp             HHHHHTC
T ss_pred             HHHHcCC
Confidence            9988765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.12  E-value=4.4e-11  Score=71.67  Aligned_cols=62  Identities=24%  Similarity=0.324  Sum_probs=51.7

Q ss_pred             CCceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecc
Q 035717            2 FPEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSD   68 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (125)
                      .++|+|+|||++|++.+++++++|+++|+++.+|..++     ...+.+...++.|++++.|+....
T Consensus        87 ~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g-----~~~~~~~~~l~~k~~~i~G~~~~~  148 (167)
T d1tt7a2          87 SKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVY  148 (167)
T ss_dssp             CCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSS
T ss_pred             cCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC-----CcccCCHHHHHHCCcEEEEEecCC
Confidence            46799999999999999999999999999999998653     223456677899999999975433

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.11  E-value=3.8e-11  Score=72.81  Aligned_cols=76  Identities=24%  Similarity=0.320  Sum_probs=56.2

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCccc-HHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHN-LTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|+||||+|++ .++.++++++++|+++.+|.....   .+ .+.+ ...++.|++++.|++.+...+     +.++
T Consensus        98 ~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~---~~-~~~~~~~~l~~k~l~i~G~~~~~~~~-----~~~~  168 (182)
T d1vj0a2          98 GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ---DP-VPFKVYEWLVLKNATFKGIWVSDTSH-----FVKT  168 (182)
T ss_dssp             TSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC---CC-EEECHHHHTTTTTCEEEECCCCCHHH-----HHHH
T ss_pred             CCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC---Cc-cccccHHHHHHCCcEEEEEEeCCHHH-----HHHH
Confidence            46899999999974 689999999999999999864321   11 2223 334667899999998765433     7777


Q ss_pred             HHHHHcC
Q 035717           81 IPHIKWA   87 (125)
Q Consensus        81 ~~l~~~g   87 (125)
                      +++++++
T Consensus       169 ~~~i~~~  175 (182)
T d1vj0a2         169 VSITSRN  175 (182)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHC
Confidence            7777765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.06  E-value=1.2e-11  Score=74.17  Aligned_cols=77  Identities=17%  Similarity=0.197  Sum_probs=60.2

Q ss_pred             CceeeEEEeCCchH---HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHH
Q 035717            3 PEGIDIYFENVGGK---MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEM   79 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      .+++|+++|++|..   .++.++++++++|+++.+|....      ...++...++.+++++.|++.+++.+     +++
T Consensus        89 ~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~~~~-----~~e  157 (168)
T d1piwa2          89 FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGSIKE-----LNQ  157 (168)
T ss_dssp             CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCCHHH-----HHH
T ss_pred             hcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCCHHH-----HHH
Confidence            45899999998853   37789999999999999997442      12334555678999999987765443     899


Q ss_pred             HHHHHHcCcee
Q 035717           80 IIPHIKWAKIV   90 (125)
Q Consensus        80 ~~~l~~~g~i~   90 (125)
                      +++++++|+++
T Consensus       158 ~l~li~~gkIk  168 (168)
T d1piwa2         158 LLKLVSEKDIK  168 (168)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHhCCCC
Confidence            99999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.05  E-value=1.6e-10  Score=68.92  Aligned_cols=76  Identities=13%  Similarity=0.160  Sum_probs=59.4

Q ss_pred             ceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHH
Q 035717            4 EGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPH   83 (125)
Q Consensus         4 ~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   83 (125)
                      ...|+|+++.+...+..++++++++|+++.+|....      ....+...++.+++++.|++.+..     +.+++++++
T Consensus        93 ~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~~-----~~~~~~l~l  161 (168)
T d1rjwa2          93 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGTR-----KDLQEALQF  161 (168)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCCH-----HHHHHHHHH
T ss_pred             CCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEeeCCH-----HHHHHHHHH
Confidence            355666666666789999999999999999987542      224567778899999999876543     348999999


Q ss_pred             HHcCcee
Q 035717           84 IKWAKIV   90 (125)
Q Consensus        84 ~~~g~i~   90 (125)
                      +++|+++
T Consensus       162 ~~~Gkik  168 (168)
T d1rjwa2         162 AAEGKVK  168 (168)
T ss_dssp             HHTTSCC
T ss_pred             HHhCCCC
Confidence            9999985

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=1.8e-10  Score=69.57  Aligned_cols=79  Identities=22%  Similarity=0.332  Sum_probs=59.7

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeeccc-ccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDY-NHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   81 (125)
                      ....|.++|++|++.+..++++++++|+++.+|..++.     ..+.+...++.|++++.|++.... +....+.|+++.
T Consensus        94 ~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~L~  168 (177)
T d1o89a2          94 KQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLV  168 (177)
T ss_dssp             CCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEECCSSSCCHHHHHHHHHHHH
T ss_pred             hhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEEecccCCHHHHHHHHHHHH
Confidence            35679999999999999999999999999999986542     223456678889999999765333 334456677776


Q ss_pred             HHHHc
Q 035717           82 PHIKW   86 (125)
Q Consensus        82 ~l~~~   86 (125)
                      +.+.+
T Consensus       169 ~~l~~  173 (177)
T d1o89a2         169 ADLPE  173 (177)
T ss_dssp             HHSCH
T ss_pred             Hhccc
Confidence            66544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.02  E-value=5.2e-10  Score=67.32  Aligned_cols=77  Identities=17%  Similarity=0.228  Sum_probs=56.6

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.|+|++|||+|.+ .+++++++++++ |+++.+|....      ...++...++ .+.++.|++.+.+.  ..+.+.++
T Consensus        96 ~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~-~~k~i~Gs~~Gs~~--~~~d~p~l  166 (174)
T d1e3ia2          96 AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVI-LGRSINGTFFGGWK--SVDSVPNL  166 (174)
T ss_dssp             TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHH-TTCEEEECSGGGCC--HHHHHHHH
T ss_pred             cCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHh-ccCEEEEEEeeCCC--hHHHHHHH
Confidence            57999999999975 799999999996 99999997431      1233444443 35688888765542  24567888


Q ss_pred             HHHHHcCc
Q 035717           81 IPHIKWAK   88 (125)
Q Consensus        81 ~~l~~~g~   88 (125)
                      ++++++|+
T Consensus       167 i~l~~~GK  174 (174)
T d1e3ia2         167 VSDYKNKK  174 (174)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHCcC
Confidence            99999885

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.95  E-value=5.6e-10  Score=66.53  Aligned_cols=72  Identities=15%  Similarity=0.214  Sum_probs=55.5

Q ss_pred             eeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHHHHH
Q 035717            5 GIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMIIPHI   84 (125)
Q Consensus         5 g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   84 (125)
                      +.++++++.++..++.++++++++|+++.+|....      ....+...++.+++++.|++.+++.+     ++++++++
T Consensus        94 ~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~~~d-----~~e~l~l~  162 (166)
T d1llua2          94 AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGTRAD-----LQEALDFA  162 (166)
T ss_dssp             EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCCHHH-----HHHHHHHH
T ss_pred             CcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecCHHH-----HHHHHHHH
Confidence            34555555566789999999999999999987432      23456778889999999987665433     88999999


Q ss_pred             HcC
Q 035717           85 KWA   87 (125)
Q Consensus        85 ~~g   87 (125)
                      ++|
T Consensus       163 ~~G  165 (166)
T d1llua2         163 GEG  165 (166)
T ss_dssp             HTT
T ss_pred             HCc
Confidence            887

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.83  E-value=7.2e-09  Score=62.06  Aligned_cols=81  Identities=15%  Similarity=0.166  Sum_probs=57.1

Q ss_pred             CCceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            2 FPEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      .+.|+|+|||++|.. .++.++.+++++|+++.++......   . ...+....+.++.++.|++++.+.  ..+.+.++
T Consensus        95 ~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~---~-~~~~~~~~~~~~~~i~Gs~~G~~~--~~~d~~~l  168 (176)
T d2fzwa2          95 TDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG---E-EIATRPFQLVTGRTWKGTAFGGWK--SVESVPKL  168 (176)
T ss_dssp             TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT---C-CEEECTHHHHTTCEEEECSGGGCC--HHHHHHHH
T ss_pred             cCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecccc---c-cccccHHHHHCCCEEEEEeeeCCc--HHHHHHHH
Confidence            367999999999975 5788999999998888876543211   1 112223345678899998776553  24558889


Q ss_pred             HHHHHcCc
Q 035717           81 IPHIKWAK   88 (125)
Q Consensus        81 ~~l~~~g~   88 (125)
                      ++++++|+
T Consensus       169 i~l~~~GK  176 (176)
T d2fzwa2         169 VSEYMSKK  176 (176)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHcCC
Confidence            99999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.83  E-value=8.1e-09  Score=61.94  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CCceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            2 FPEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      .++|+|++||++|.. .++.++.+++++|+.+.++.....    .........++.+++++.|++.+.+  ...+.+.++
T Consensus        95 ~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~~--~~~~~~~~l  168 (176)
T d2jhfa2          95 SNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGAIFGGF--KSKDSVPKL  168 (176)
T ss_dssp             TTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGGC--CHHHHHHHH
T ss_pred             hcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEEEEeCC--CHHHHHHHH
Confidence            357999999999975 578899999998666555543321    1112233346678999999876654  234568889


Q ss_pred             HHHHHcCc
Q 035717           81 IPHIKWAK   88 (125)
Q Consensus        81 ~~l~~~g~   88 (125)
                      ++++++|+
T Consensus       169 i~~~~~GK  176 (176)
T d2jhfa2         169 VADFMAKK  176 (176)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHCcC
Confidence            99999885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=98.78  E-value=1.9e-09  Score=64.81  Aligned_cols=80  Identities=15%  Similarity=0.067  Sum_probs=52.3

Q ss_pred             CceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|+||||+|+ ..+++++++++++|+++.+|......  ....+........++.++.+..+...    ...++++.
T Consensus        94 g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~i~g~~~~~~----r~~~e~l~  167 (174)
T d1jqba2          94 GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGD--ALLIPRVEWGCGMAHKTIKGGLCPGG----RLRAERLR  167 (174)
T ss_dssp             TSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSS--EEEEETTTTGGGTBCCEEEEBCCCCH----HHHHHHHH
T ss_pred             ccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCC--cCcCcHhHHHHHhCccEEEEecCCCC----cccHHHHH
Confidence            3589999999996 46899999999999999999754210  00001111112345677777654332    22367788


Q ss_pred             HHHHcCc
Q 035717           82 PHIKWAK   88 (125)
Q Consensus        82 ~l~~~g~   88 (125)
                      ++++.|+
T Consensus       168 ~li~~gk  174 (174)
T d1jqba2         168 DMVVYNR  174 (174)
T ss_dssp             HHHHTTS
T ss_pred             HHHHcCC
Confidence            8888875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=1e-08  Score=61.59  Aligned_cols=80  Identities=15%  Similarity=0.116  Sum_probs=53.4

Q ss_pred             CceeeEEEeCCchHHHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhc-cceeeeeeeccc---ccchHHHHH
Q 035717            3 PEGIDIYFENVGGKMLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILK-QVRMEGFLVSDY---NHLYPKFLE   78 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~   78 (125)
                      ++|+|+++|++|++++..++++++++|+++.+|.....     ....+...+..+ ++.+.+..+..+   .+...+.++
T Consensus        95 g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  169 (179)
T d1qora2          95 GKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASN  169 (179)
T ss_dssp             TCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHH
T ss_pred             CCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCC-----ccccchhhhhccceEEEEeeEEeeecCCHHHHHHHHH
Confidence            46899999999999999999999999999999875532     112233333333 333333322222   223456677


Q ss_pred             HHHHHHHcC
Q 035717           79 MIIPHIKWA   87 (125)
Q Consensus        79 ~~~~l~~~g   87 (125)
                      ++.+++++|
T Consensus       170 ~l~~lv~~G  178 (179)
T d1qora2         170 ELFSLIASG  178 (179)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHCc
Confidence            888888887

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.75  E-value=2.1e-08  Score=60.12  Aligned_cols=79  Identities=16%  Similarity=0.189  Sum_probs=55.7

Q ss_pred             CCceeeEEEeCCchH-HHHHHHHhhcc-CCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHH
Q 035717            2 FPEGIDIYFENVGGK-MLDAVLINMKI-GGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEM   79 (125)
Q Consensus         2 ~~~g~Dvv~d~~g~~-~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      .++|+|++||++|.. .+..++.++++ +|+++.+|....    ....+++.. .+.++.++.|++++.+..   +.+.+
T Consensus        94 ~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----~~~~~~~~~-~~~~~~~i~Gs~~G~~~~---~d~~~  165 (174)
T d1p0fa2          94 TNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPL-LLLTGRSLKGSVFGGFKG---EEVSR  165 (174)
T ss_dssp             TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTH-HHHTTCEEEECSGGGCCG---GGHHH
T ss_pred             cCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----ccccccCHH-HHhCCCEEEEEEeCCCCH---HHHHH
Confidence            467999999999975 67788888776 599999997442    111222322 345678999988765531   24788


Q ss_pred             HHHHHHcCc
Q 035717           80 IIPHIKWAK   88 (125)
Q Consensus        80 ~~~l~~~g~   88 (125)
                      +++++++|+
T Consensus       166 lidl~~~gK  174 (174)
T d1p0fa2         166 LVDDYMKKK  174 (174)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHcCC
Confidence            999999886

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=98.73  E-value=2.5e-08  Score=59.59  Aligned_cols=79  Identities=13%  Similarity=0.115  Sum_probs=55.0

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccCCEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIGGQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMII   81 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++|+|+++|++|+. .+..++.+++++|.++.++....     .....+....+.++.++.|++.+.+.  .++.+.+++
T Consensus        96 ~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-----~~~~~~~~~~~~~~~~i~Gs~~G~~~--~~~d~~~~i  168 (175)
T d1cdoa2          96 NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-----LHDVATRPIQLIAGRTWKGSMFGGFK--GKDGVPKMV  168 (175)
T ss_dssp             TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-----SSCEEECHHHHHTTCEEEECSGGGCC--HHHHHHHHH
T ss_pred             cCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-----CcccCccHHHHHCCcEEEEEEEeCCc--HHHHHHHHH
Confidence            46899999999975 57888888888765555443321     11123444556778999998766542  345688999


Q ss_pred             HHHHcCc
Q 035717           82 PHIKWAK   88 (125)
Q Consensus        82 ~l~~~g~   88 (125)
                      +++.+|+
T Consensus       169 ~l~~~gK  175 (175)
T d1cdoa2         169 KAYLDKK  175 (175)
T ss_dssp             HHHHTTS
T ss_pred             HHHHcCC
Confidence            9999886

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=98.61  E-value=7.9e-08  Score=58.57  Aligned_cols=81  Identities=14%  Similarity=0.179  Sum_probs=52.8

Q ss_pred             CceeeEEEeCCch----------------HHHHHHHHhhccCCEEEEEccccccCCCC-------CCCcccHHHHHhccc
Q 035717            3 PEGIDIYFENVGG----------------KMLDAVLINMKIGGQIAVCGMISQYNLDE-------PKGIHNLTRLILKQV   59 (125)
Q Consensus         3 ~~g~Dvv~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~~~~~~~~~~~~~   59 (125)
                      +.|+|++||++|.                ++++.++++++++|+++.+|.........       .....++..++.|++
T Consensus        92 g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  171 (195)
T d1kola2          92 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSH  171 (195)
T ss_dssp             SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTC
T ss_pred             CCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCceeeeHHHHHhhcc
Confidence            4589999999984                47999999999999999999754321100       001123344555666


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHcCc
Q 035717           60 RMEGFLVSDYNHLYPKFLEMIIPHIKWAK   88 (125)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~   88 (125)
                      ++.+-   ..  ...+.+.++++++.+++
T Consensus       172 ~i~~g---~~--~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         172 SFHTG---QT--PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             EEEES---SC--CHHHHHHHHHHHHHTTS
T ss_pred             eeccC---CC--chHHHHHHHHHHHHcCC
Confidence            65431   11  24455778888887764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.42  E-value=4.2e-07  Score=54.38  Aligned_cols=77  Identities=12%  Similarity=0.152  Sum_probs=51.2

Q ss_pred             CceeeEEEeCCchH-HHHHHHHhhccC-CEEEEEccccccCCCCCCCcccHHHHHhccceeeeeeecccccchHHHHHHH
Q 035717            3 PEGIDIYFENVGGK-MLDAVLINMKIG-GQIAVCGMISQYNLDEPKGIHNLTRLILKQVRMEGFLVSDYNHLYPKFLEMI   80 (125)
Q Consensus         3 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++|+|+++|++|.. ....++.++.++ |+++.+|....    .....++. ..+.++.+++|++.+....  .+.+.++
T Consensus        97 g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----~~~~~~~~-~~~~~~~~i~Gs~~G~~~~--~~dip~l  169 (176)
T d1d1ta2          97 GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----AKMLTYDP-MLLFTGRTWKGCVFGGLKS--RDDVPKL  169 (176)
T ss_dssp             TSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----TCCEEECT-HHHHTTCEEEECSGGGCCH--HHHHHHH
T ss_pred             cccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----ccccCCCH-HHHhCCCEEEEEEEeCCCc--HHHHHHH
Confidence            57999999999975 577777777655 99999997542    11112222 2455688999988765432  3456677


Q ss_pred             HHHHHc
Q 035717           81 IPHIKW   86 (125)
Q Consensus        81 ~~l~~~   86 (125)
                      ++++.+
T Consensus       170 i~~~~~  175 (176)
T d1d1ta2         170 VTEFLA  175 (176)
T ss_dssp             HHHHTT
T ss_pred             HHHHhC
Confidence            776654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.40  E-value=0.019  Score=33.55  Aligned_cols=35  Identities=20%  Similarity=0.133  Sum_probs=28.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      .++|+|+||+|. .+.+.+-.++..|.+.|.++...
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            379999999995 56777778999999999887643

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.23  E-value=0.071  Score=30.93  Aligned_cols=33  Identities=12%  Similarity=0.032  Sum_probs=25.6

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      .++|+|+||+|. ...+.+-..+..+.++|..+.
T Consensus        77 ~~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~  110 (171)
T d1cf2o1          77 DEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGG  110 (171)
T ss_dssp             HTCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             cCCCEEEEccCCCCCHHHHHHHHHcCCCEEEECC
Confidence            368999999995 456667778888888887764

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=91.56  E-value=0.038  Score=32.26  Aligned_cols=35  Identities=14%  Similarity=0.137  Sum_probs=27.5

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      .|+|+|+||+|. .+.+.+.+.|..+.+-|.+..+.
T Consensus        90 ~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          90 LKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             TTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             cccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            489999999995 45677888888888877776543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=90.99  E-value=0.039  Score=31.95  Aligned_cols=34  Identities=21%  Similarity=0.189  Sum_probs=26.6

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      |+|+|+||+|. .+.+.+...++.+.+-|.+..++
T Consensus        88 gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          88 GVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            79999999995 45677778888888777776543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.79  E-value=0.11  Score=30.28  Aligned_cols=32  Identities=13%  Similarity=0.031  Sum_probs=24.2

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEcc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      ++|+|+||+|. ...+.+-.+++.+-+++..|.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            68999999995 456666677777767777654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=90.28  E-value=0.061  Score=31.20  Aligned_cols=34  Identities=18%  Similarity=0.259  Sum_probs=26.8

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      |+|+|+||+|. .+.+.+...++.+.+-|.+..++
T Consensus        87 gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          87 GAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             TCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             CCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            79999999995 45677888898888777776543

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=89.46  E-value=0.062  Score=31.25  Aligned_cols=33  Identities=18%  Similarity=0.338  Sum_probs=25.2

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+|+||+|. .+.+.+...+..+.+-|.+..+
T Consensus        88 ~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap  121 (171)
T d3cmco1          88 GVDIVVESTGRFTKREDAAKHLEAGAKKVIISAP  121 (171)
T ss_dssp             TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CCcEEEEecCccCCHHHHHHHHhCCCceEEEecc
Confidence            79999999995 4566777788877766666543

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=89.22  E-value=0.066  Score=31.06  Aligned_cols=33  Identities=15%  Similarity=0.332  Sum_probs=25.3

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+|+||+|. .+.+.+...+..+.+-|.+..+
T Consensus        89 gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP  122 (169)
T d1hdgo1          89 GVDFVIESTGVFRNREKAELHLQAGAKKVIITAP  122 (169)
T ss_dssp             TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CCCEEEEecceeccccchhhhccCCCceEEEecc
Confidence            79999999995 4567777788887766666554

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.69  E-value=0.099  Score=30.28  Aligned_cols=35  Identities=14%  Similarity=0.218  Sum_probs=26.8

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      .|+|+|+||+|. .+.+.+...+..+.+-|.+..+.
T Consensus        88 ~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          88 AGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             TTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             cCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            489999999995 45667777888888777776543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.18  E-value=0.087  Score=30.42  Aligned_cols=34  Identities=15%  Similarity=0.175  Sum_probs=26.0

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEcccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMIS   38 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~   38 (125)
                      |+|+|+||+|. .+.+.+...+..+.+-|.+..+.
T Consensus        88 gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          88 QVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            79999999995 45667778888887767665543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=88.07  E-value=0.11  Score=30.11  Aligned_cols=34  Identities=15%  Similarity=0.226  Sum_probs=25.7

Q ss_pred             ceeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            4 EGIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         4 ~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      .|+|+|+||+|. .+.+.+..+++.+.+=|.+..+
T Consensus        85 ~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          85 AGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             GTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             cCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            489999999995 4566777888877766666543

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=87.78  E-value=0.091  Score=30.54  Aligned_cols=33  Identities=21%  Similarity=0.252  Sum_probs=24.8

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+|+||+|. .+.+.+-..|..+.+=|.+..+
T Consensus        90 gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP  123 (172)
T d1rm4a1          90 GIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAP  123 (172)
T ss_dssp             TCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSC
T ss_pred             CCCEEEecCceEccHHHHHHHHhcCCceEEeecc
Confidence            79999999995 4566777788888766666543

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.62  E-value=0.096  Score=30.93  Aligned_cols=33  Identities=18%  Similarity=0.191  Sum_probs=25.6

Q ss_pred             eeeEEEeCCch-HHHHHHHHhhccCCEEEEEccc
Q 035717            5 GIDIYFENVGG-KMLDAVLINMKIGGQIAVCGMI   37 (125)
Q Consensus         5 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~   37 (125)
                      |+|+|+||+|. .+.+.+..++..+.+-|.+..+
T Consensus       103 gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  136 (190)
T d1k3ta1         103 GVEYVIESTGLFTAKAAAEGHLRGGARKVVISAP  136 (190)
T ss_dssp             TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CCcEEEEecccccccccchhhcccCcceeeeccC
Confidence            79999999994 4566777888888777777553

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=80.72  E-value=0.37  Score=29.23  Aligned_cols=34  Identities=18%  Similarity=0.292  Sum_probs=24.4

Q ss_pred             CceeeEEEeCC-----ch----HHHHHHHHhhccCCEEEEEcc
Q 035717            3 PEGIDIYFENV-----GG----KMLDAVLINMKIGGQIAVCGM   36 (125)
Q Consensus         3 ~~g~Dvv~d~~-----g~----~~~~~~~~~l~~~G~~v~~g~   36 (125)
                      |.++|+|+-..     ..    ..+..+.++|+|+|+++.+-.
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            56789987422     21    237888999999999988643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.20  E-value=0.28  Score=29.14  Aligned_cols=30  Identities=27%  Similarity=0.409  Sum_probs=22.9

Q ss_pred             eeeEEEeCCchHH-HHHHHHhhccCCEEEEE
Q 035717            5 GIDIYFENVGGKM-LDAVLINMKIGGQIAVC   34 (125)
Q Consensus         5 g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~   34 (125)
                      .+|+|+.+.+... .+..++.|+|+|++|..
T Consensus       144 ~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         144 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             CEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             chhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            4899997666443 45678899999999873