Citrus Sinensis ID: 035721
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 308 | 2.2.26 [Sep-21-2011] | |||||||
| Q99685 | 303 | Monoglyceride lipase OS=H | yes | no | 0.860 | 0.874 | 0.287 | 4e-18 | |
| O35678 | 303 | Monoglyceride lipase OS=M | yes | no | 0.860 | 0.874 | 0.258 | 5e-14 | |
| Q55EQ3 | 937 | Uncharacterized abhydrola | no | no | 0.740 | 0.243 | 0.263 | 3e-13 | |
| Q8R431 | 303 | Monoglyceride lipase OS=R | yes | no | 0.860 | 0.874 | 0.250 | 8e-13 | |
| O34705 | 259 | Phospholipase YtpA OS=Bac | yes | no | 0.720 | 0.857 | 0.225 | 1e-09 | |
| P28321 | 313 | Monoglyceride lipase OS=S | yes | no | 0.801 | 0.789 | 0.236 | 1e-07 | |
| O94305 | 378 | Putative monoglyceride li | yes | no | 0.743 | 0.605 | 0.245 | 3e-06 | |
| P07000 | 340 | Lysophospholipase L2 OS=E | N/A | no | 0.415 | 0.376 | 0.256 | 0.0005 | |
| P59588 | 340 | Lysophospholipase L2 OS=E | yes | no | 0.415 | 0.376 | 0.256 | 0.0005 |
| >sp|Q99685|MGLL_HUMAN Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 10/275 (3%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
++ N+ G LF ++W P K L + V HG GE S + A + A DH
Sbjct: 21 HLVNADGQYLFCRYWKPTGTPKAL--IFVSHG-AGEHSGRYEELARMLMGLDLLVFAHDH 77
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154
GHG S+G + D + V D + DS + + P LP FL S+GGAIA+ +
Sbjct: 78 VGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY-PGLPVFLLGHSMGGAIAILTAAERP 136
Query: 155 GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV-PTWRVVPTRGSLPMVSFKEEWKR 213
G + G++L + + + + + L V LV P + P S V + + +
Sbjct: 137 GHFAGMVLISPLVLANPESATTFKV--LAAKVLNLVLPNLSLGPIDSS---VLSRNKTEV 191
Query: 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
+ S P A + ++LL ++ ++ VP L+ G D +CD L
Sbjct: 192 DIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLM 251
Query: 274 KRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ A S+DKTL IY G +H L E E VF E+
Sbjct: 252 ELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEI 286
|
Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain (By similarity). Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|O35678|MGLL_MOUSE Monoglyceride lipase OS=Mus musculus GN=Mgll PE=1 SV=1 | Back alignment and function description |
|---|
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 10/275 (3%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
++ N+ G LF ++W P K L + V HG GE A + A DH
Sbjct: 21 HLVNADGQYLFCRYWKPSGTPKAL--IFVSHG-AGEHCGRYDELAHMLKGLDMLVFAHDH 77
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154
GHG S+G + D V D + D+ + + PD+P FL S+GGAI++ + +
Sbjct: 78 VGHGQSEGERMVVSDFQVFVRDVLQHVDTIQKDY-PDVPIFLLGHSMGGAISILVAAERP 136
Query: 155 GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL-PMVSFKEEWKR 213
+ G++L + P L A L+ T G + V + + +
Sbjct: 137 TYFSGMVLISPLV-----LANPESASTLKVLAAKLLNFVLPNMTLGRIDSSVLSRNKSEV 191
Query: 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
L S P A + ++LL ++ + +P L+ G D +CD L
Sbjct: 192 DLYNSDPLVCRAGLKVCFGIQLLNAVARVERAMPRLTLPFLLLQGSADRLCDSKGAYLLM 251
Query: 274 KRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ + S+DKTL +Y G +H L E E V E+
Sbjct: 252 ESSRSQDKTLKMYEGAYHVLHRELPEVTNSVLHEV 286
|
Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q55EQ3|Y9086_DICDI Uncharacterized abhydrolase domain-containing protein DDB_G0269086 OS=Dictyostelium discoideum GN=DDB_G0269086 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 30/258 (11%)
Query: 49 WTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108
WTP K + + ++HG GE S + FA+ G A D +GHG S G+ H P
Sbjct: 21 WTP--KVKPIATVTMIHGL-GEHSGRYEHVFSRFAEQGIKVNAFDQRGHGISSGVRGHSP 77
Query: 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168
L ++D + D+P F+Y S GG +AL+ L++K + A C
Sbjct: 78 SLEQSLKD----IQLIASTAETDVPHFIYGHSFGGCLALHYNLKKKDH------HPAGCI 127
Query: 169 ISQKF-KPPWPLEHLLFT----VAWLVPTWRVV----PTRGSLPMVSFKEEWKRKLALSS 219
++ KP + + + + L+P+W + PT S E + KL +
Sbjct: 128 VTSPLIKPAIKVSGVKLSMGNLLGGLMPSWTISNSIDPTLISKDSAVVNEYKQDKLVHNK 187
Query: 220 PRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279
+A+ + +L+ DL +F + P+L+ H DD + P ++ Y R S
Sbjct: 188 ISLGMAKWMLQRSEQLI----DLAPQF---DTPLLLVHANDDKITCPKASQQFYDRVPST 240
Query: 280 -DKTLSIYPGMWHQLIGE 296
DKTL ++ M+H++ E
Sbjct: 241 VDKTLKLWENMYHEVHNE 258
|
Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8R431|MGLL_RAT Monoglyceride lipase OS=Rattus norvegicus GN=Mgll PE=1 SV=1 | Back alignment and function description |
|---|
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 114/275 (41%), Gaps = 10/275 (3%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
++ N+ G LF ++W P K L + V HG GE A + + A DH
Sbjct: 21 HLVNADGQYLFCRYWKPSGTPKAL--IFVSHG-AGEHCGRYDELAQMLKRLDMLVFAHDH 77
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154
GHG S+G + D V D + ++ + + P++P FL S+GGAI++ +
Sbjct: 78 VGHGQSEGERMVVSDFQVFVRDLLQHVNTVQKDY-PEVPVFLLGHSMGGAISILAAAERP 136
Query: 155 GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL-PMVSFKEEWKR 213
+ G+IL + P L A L+ + G + V + + +
Sbjct: 137 THFSGMILISPLI-----LANPESASTLKVLAAKLLNFVLPNISLGRIDSSVLSRNKSEV 191
Query: 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
L S P A + ++LL ++ + +P L+ G D +CD L
Sbjct: 192 DLYNSDPLICHAGVKVCFGIQLLNAVSRVERAMPRLTLPFLLLQGSADRLCDSKGAYLLM 251
Query: 274 KRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ + S+DKTL +Y G +H L E E V E+
Sbjct: 252 ESSPSQDKTLKMYEGAYHVLHKELPEVTNSVLHEI 286
|
Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O34705|PLBAC_BACSU Phospholipase YtpA OS=Bacillus subtilis (strain 168) GN=ytpA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 31/253 (12%)
Query: 58 LGVLCVVHG---FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114
+ V+ ++HG + G W++++ + SG+ D G G + HI +
Sbjct: 10 VAVIVIIHGASEYHGRYKWLIEM----WRSSGYHVVMGDLPGQGTTTRARGHIRSFQEYI 65
Query: 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AWDGLILNGAMCGISQKF 173
++ ++ D R DLP FL S+GG +A+ +Q+ G+IL+ G+ K
Sbjct: 66 DEVDAWIDKART---FDLPVFLLGHSMGGLVAIEWVKQQRNPRITGIILSSPCLGLQIKV 122
Query: 174 KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATAL 233
L V + P+ + V + S+ M + E+ + + + R +
Sbjct: 123 NKALDLASKGLNV--IAPSLK-VDSGLSIDMATRNED-----VIEADQNDSLYVRKVS-- 172
Query: 234 ELLRVSRDLQGRFEE--------VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285
+R R+L E ++VP+L+ GDD + D V + + AS +K
Sbjct: 173 --VRWYRELLKTIESAMVPTEAFLKVPLLVMQAGDDKLVDKTMVIKWFNGVASHNKAYRE 230
Query: 286 YPGMWHQLIGEPE 298
+ G++H++ EPE
Sbjct: 231 WEGLYHEIFNEPE 243
|
Phospholipase involved in the biosynthesis of the antibiotic bacilysocin. It probably catalyzes the hydrolysis of the 2-sn-acyl moiety of phosphatidylglycerol to produce bacilysocin (lysophosphatidylglycerol). Is also able to catalyze the hydrolysis reaction of one acyl bond in phosphatidylcholine in vitro (actual cleavage point is unknown), resulting in lysophosphatidylcholine. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P28321|MGLL_YEAST Monoglyceride lipase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJU3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 15/262 (5%)
Query: 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF-SDGLVAHIPDLNPVVEDA 117
G + ++HGF GE + I + +G+ + D +G G S G + D V D
Sbjct: 41 GRVLLIHGF-GEYTKIQFRLMDHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDL 99
Query: 118 ISFFDSFRAR-HAPDLPAFLYSESLGGAIALYITL--RQKGAWDGLILNGAMCGISQKFK 174
F + + A +P F++ S+GG I L + K G I +G + +
Sbjct: 100 EHFVEKNLSECKAKGIPLFMWGHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTM 159
Query: 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLA-------LSSPRRPVARP 227
P + + +A +P R+ T L ++ + ++ L L R +
Sbjct: 160 YNKPTQIIAPLLAKFLPRVRI-DTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDF 218
Query: 228 RAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP 287
A + +Q F + + P++I HG DD + DP E+ + S DK L +YP
Sbjct: 219 MQRGAKLYKNENNYIQKNFAK-DKPVIIMHGQDDTINDPKGSEKFIQDCPSADKELKLYP 277
Query: 288 GMWHQLIG-EPEENVELVFGEM 308
G H + E ++ VF +M
Sbjct: 278 GARHSIFSLETDKVFNTVFNDM 299
|
Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Controls inactivation of the signaling lipid N-palmitoylethanolamine (PEA). Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O94305|MGLL_SCHPO Putative monoglyceride lipase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC5E4.05c PE=1 SV=1 | Back alignment and function description |
|---|
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 40/269 (14%)
Query: 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFS--- 100
L+T+ WT + K + + +HGF + + L ++ D +G G S
Sbjct: 4 LYTKDWTDVK-DKPVARVVFIHGFGEHVNAYPEFFEALNERN-IEVYTFDQRGFGHSRKG 61
Query: 101 --------DGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALY--IT 150
G PDL+ + RA +LP FL+ S+GG +AL I+
Sbjct: 62 GPKKQGCTGGWSLVFPDLD---------YQILRASDT-ELPLFLWGHSMGGGLALRYGIS 111
Query: 151 LRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210
+ G+I M +P + L L V+ + P + S +
Sbjct: 112 GTHRHKLAGVIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNFLFDSDVQS-------QH 164
Query: 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV------PMLICHGGDDVVC 264
R A++ +R P ++ L S L + +E+ P+LI HG DD V
Sbjct: 165 ITRDEAVN--QRLQDDPLVSSVGSLQVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNVT 222
Query: 265 DPACVEELYKRAASKDKTLSIYPGMWHQL 293
+E Y+ A +KDKT YPG +H L
Sbjct: 223 CSDSSKEFYENAGTKDKTYQSYPGFYHSL 251
|
Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P07000|PLDB_ECOLI Lysophospholipase L2 OS=Escherichia coli (strain K12) GN=pldB PE=4 SV=4 | Back alignment and function description |
|---|
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 86 GFATCAIDHQGHGFSDGLVA-----HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES 140
GF IDH+G G S L+A H+ N V+D +F+ + P ++ + S
Sbjct: 81 GFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAFWQQ-EVQPGPWRKRYILAHS 139
Query: 141 LGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHLLFTVAWLVPT- 192
+GGAI+ R G D + L M GI + W H F + + T
Sbjct: 140 MGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTG 199
Query: 193 -WRVVPTRGSLPMVSFKEEWKRKL 215
WR +P ++ + ++ ++R L
Sbjct: 200 RWRALPFAINV-LTHSRQRYRRNL 222
|
Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 5 |
| >sp|P59588|PLDB_ECOL6 Lysophospholipase L2 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=pldB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 86 GFATCAIDHQGHGFSDGLVA-----HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES 140
GF IDH+G G S L+A H+ N V+D +F+ + P ++ + S
Sbjct: 81 GFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAFWQQ-EVQPGPWRKRYILAHS 139
Query: 141 LGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHLLFTVAWLVPT- 192
+GGAI+ R G D + L M GI + W H F + + T
Sbjct: 140 MGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTG 199
Query: 193 -WRVVPTRGSLPMVSFKEEWKRKL 215
WR +P ++ + ++ ++R L
Sbjct: 200 RWRALPFAINV-LTHSRQRYRRNL 222
|
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 308 | ||||||
| 147855038 | 1395 | hypothetical protein VITISV_036229 [Viti | 0.993 | 0.219 | 0.788 | 1e-145 | |
| 224113027 | 331 | predicted protein [Populus trichocarpa] | 0.990 | 0.921 | 0.769 | 1e-143 | |
| 225449056 | 329 | PREDICTED: monoglyceride lipase [Vitis v | 0.993 | 0.930 | 0.788 | 1e-142 | |
| 15239709 | 330 | esterase/lipase/thioesterase family prot | 1.0 | 0.933 | 0.763 | 1e-142 | |
| 356535645 | 325 | PREDICTED: uncharacterized abhydrolase d | 0.993 | 0.941 | 0.768 | 1e-141 | |
| 224097929 | 338 | mtn21-like protein [Populus trichocarpa] | 1.0 | 0.911 | 0.758 | 1e-141 | |
| 357443267 | 325 | Monoglyceride lipase [Medicago truncatul | 0.993 | 0.941 | 0.768 | 1e-140 | |
| 297807987 | 326 | esterase/lipase/thioesterase family prot | 1.0 | 0.944 | 0.750 | 1e-140 | |
| 449449352 | 333 | PREDICTED: monoglyceride lipase-like [Cu | 0.993 | 0.918 | 0.759 | 1e-139 | |
| 449487195 | 333 | PREDICTED: monoglyceride lipase-like [Cu | 0.993 | 0.918 | 0.753 | 1e-138 |
| >gi|147855038|emb|CAN82378.1| hypothetical protein VITISV_036229 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 272/308 (88%), Gaps = 2/308 (0%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HPVAEANEQS FGSL+P EFYARHSV+HSSEYITNSRG++LFTQ WTPLPP K +G L
Sbjct: 2 VHPVAEANEQSPFGSLSPSEFYARHSVTHSSEYITNSRGMKLFTQSWTPLPPTKIIGTLA 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VVHGFTGESSW +QLTAV F K+GFATCAIDHQGHGFSDGLVAHIPD+NPVV+D I+FFD
Sbjct: 62 VVHGFTGESSWFLQLTAVHFTKAGFATCAIDHQGHGFSDGLVAHIPDINPVVDDCIAFFD 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQKFKPPWPLE 180
SFRARHA LP+FLYSESLGGAIAL ITLR+ + WDGL+LNGAMCGIS KFKPPWPLE
Sbjct: 122 SFRARHAXSLPSFLYSESLGGAIALLITLRRGPSRPWDGLVLNGAMCGISPKFKPPWPLE 181
Query: 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR 240
H LF +A +VPTWRVVPTRG+LP +SFK EWKR LAL+SPRRPVARPRAATA ELLRV R
Sbjct: 182 HFLFLLAAVVPTWRVVPTRGALPQLSFKVEWKRNLALASPRRPVARPRAATAQELLRVCR 241
Query: 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEEN 300
++Q R+ EVEVP L+ HG DDVVCDPACVEELY+RA SKDKTL IYP M HQL+GEP+EN
Sbjct: 242 EIQNRYGEVEVPFLVVHGADDVVCDPACVEELYRRAPSKDKTLKIYPDMIHQLVGEPDEN 301
Query: 301 VELVFGEM 308
VELVFG++
Sbjct: 302 VELVFGDI 309
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113027|ref|XP_002316366.1| predicted protein [Populus trichocarpa] gi|222865406|gb|EEF02537.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/308 (76%), Positives = 271/308 (87%), Gaps = 3/308 (0%)
Query: 4 HPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCV 63
HPVAEANEQS FG+L+P EFYA+H V+HSSEYITNSRG +LFTQWWTPLPP+KT+G + V
Sbjct: 5 HPVAEANEQSPFGTLSPTEFYAKHQVTHSSEYITNSRGFKLFTQWWTPLPPSKTIGCVAV 64
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL---VAHIPDLNPVVEDAISF 120
VHGFTGESSW +QLT++LFA+ GF+ CAIDHQGHGFSDGL + HIPD+NPVVED +
Sbjct: 65 VHGFTGESSWFIQLTSILFAQKGFSVCAIDHQGHGFSDGLDNLMYHIPDINPVVEDCTQY 124
Query: 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180
F +FR HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS KFKPPWPLE
Sbjct: 125 FKTFRENHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISAKFKPPWPLE 184
Query: 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR 240
HLLF VA +VPTWRVVPTRGSLP VSFKEEWK KLA +SP+R RPRAATA EL+RV +
Sbjct: 185 HLLFVVAAVVPTWRVVPTRGSLPEVSFKEEWKAKLAFASPKRVAMRPRAATAFELIRVCK 244
Query: 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEEN 300
+LQGRF EV+VP+L+ HGGDD+VCDPAC +EL++RAAS D+TL IYPGMWHQL+GE EEN
Sbjct: 245 ELQGRFGEVDVPLLVVHGGDDMVCDPACAKELFERAASTDRTLKIYPGMWHQLVGESEEN 304
Query: 301 VELVFGEM 308
V LVFG++
Sbjct: 305 VNLVFGDI 312
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449056|ref|XP_002274887.1| PREDICTED: monoglyceride lipase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 273/308 (88%), Gaps = 2/308 (0%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HPVAEANEQS FGSL+P EFYARHSV+HSSEYITNSRG++LFTQ WTPLPP K +G L
Sbjct: 2 VHPVAEANEQSPFGSLSPSEFYARHSVTHSSEYITNSRGMKLFTQSWTPLPPTKIIGTLA 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VVHGFTGESSW +QLTAV F K+GFATCAIDHQGHGFSDGLVAHIPD+NPVV+D I+FFD
Sbjct: 62 VVHGFTGESSWFLQLTAVHFTKAGFATCAIDHQGHGFSDGLVAHIPDINPVVDDCIAFFD 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQKFKPPWPLE 180
SFRARHAP LP+FLYSESLGGAIAL ITLR+ + WDGL+LNGAMCGIS KFKPPWPLE
Sbjct: 122 SFRARHAPSLPSFLYSESLGGAIALLITLRRGPSRPWDGLVLNGAMCGISPKFKPPWPLE 181
Query: 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR 240
H LF +A +VPTWRVVPTRG+LP +SFK EWKR LAL+SPRRPVARPRAATA ELLRV R
Sbjct: 182 HFLFLLAAVVPTWRVVPTRGALPQLSFKVEWKRNLALASPRRPVARPRAATAQELLRVCR 241
Query: 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEEN 300
++Q R+ E+EVP L+ HG DDVVCDPACVEELY+RA SKDKTL IYP M HQL+GEP+EN
Sbjct: 242 EIQNRYGEMEVPFLVVHGADDVVCDPACVEELYRRAPSKDKTLKIYPDMIHQLVGEPDEN 301
Query: 301 VELVFGEM 308
VELVFG++
Sbjct: 302 VELVFGDI 309
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15239709|ref|NP_197430.1| esterase/lipase/thioesterase family protein [Arabidopsis thaliana] gi|17380668|gb|AAL36164.1| putative phospholipase [Arabidopsis thaliana] gi|21554372|gb|AAM63479.1| phospholipase-like protein [Arabidopsis thaliana] gi|23397199|gb|AAN31882.1| putative phospholipase [Arabidopsis thaliana] gi|26983896|gb|AAN86200.1| putative phospholipase [Arabidopsis thaliana] gi|332005298|gb|AED92681.1| esterase/lipase/thioesterase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/309 (76%), Positives = 275/309 (88%), Gaps = 1/309 (0%)
Query: 1 MPIHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGV 60
M +HP+++ANE + FGSLT DEFYA+HSVSHSS +ITN RGL+LFTQWW+PLPP K +G+
Sbjct: 1 MGLHPISDANEHNPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGI 60
Query: 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120
+ VVHGFTGESSW +QLT++LFAKSGF TCAIDHQGHGFSDGL+AHIPD+NPVV+D ISF
Sbjct: 61 IAVVHGFTGESSWFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISF 120
Query: 121 FDSFRARHAP-DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
FD FR+R P DLP FLYSESLGGAIALYI+LRQ+G WDGLILNGAMCGIS KFKPPWPL
Sbjct: 121 FDDFRSRQTPSDLPCFLYSESLGGAIALYISLRQRGVWDGLILNGAMCGISDKFKPPWPL 180
Query: 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS 239
EHLLF VA L+PTWRV+PTRGS+P VSFKE WKRKLA++SPRR VA+PRAATA EL+RV
Sbjct: 181 EHLLFVVANLIPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVAKPRAATAYELIRVC 240
Query: 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299
+DLQGRFEEVEVP+LI HGG DVVCD ACVEEL++RA S+DKT+ IYP +WHQ+IGE EE
Sbjct: 241 KDLQGRFEEVEVPLLIVHGGGDVVCDVACVEELHRRAISEDKTIKIYPELWHQMIGESEE 300
Query: 300 NVELVFGEM 308
V+LV+G+M
Sbjct: 301 KVDLVYGDM 309
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535645|ref|XP_003536355.1| PREDICTED: uncharacterized abhydrolase domain-containing protein DDB_G0269086-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/307 (76%), Positives = 274/307 (89%), Gaps = 1/307 (0%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HP+AEANE+S FG LTP+EFYA HSVSH SE++TN RGL+LFTQWWTPLPP +G L
Sbjct: 2 VHPIAEANEESPFGKLTPEEFYAHHSVSHGSEFVTNPRGLKLFTQWWTPLPPKTIIGTLA 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VVHG+TGESSW++QLTAV FAK+GFATCA+DHQGHGFSDGLVAHIPD+NPVV+D I+FF+
Sbjct: 62 VVHGYTGESSWLLQLTAVHFAKAGFATCALDHQGHGFSDGLVAHIPDINPVVDDCITFFE 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGA-WDGLILNGAMCGISQKFKPPWPLEH 181
+FR+R P LP+FLY+ESLGGAIAL ITLR++ W G+ILNGAMCGIS KFKPPWPLEH
Sbjct: 122 NFRSRFDPSLPSFLYAESLGGAIALLITLRRREMLWSGVILNGAMCGISAKFKPPWPLEH 181
Query: 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241
L VA ++PTWRVVPTRGS+P VSFK EWKR+LAL+SPRR VARPRAATA ELLR+ R+
Sbjct: 182 FLSVVAAVIPTWRVVPTRGSIPEVSFKVEWKRRLALASPRRTVARPRAATAQELLRICRE 241
Query: 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENV 301
LQGR+EEVEVP+L+ HGGDDVVCDPACVEEL+ RAASKDKTL IYPGMWHQ++GEPEENV
Sbjct: 242 LQGRYEEVEVPLLVAHGGDDVVCDPACVEELHARAASKDKTLKIYPGMWHQMVGEPEENV 301
Query: 302 ELVFGEM 308
ELVFG+M
Sbjct: 302 ELVFGDM 308
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097929|ref|XP_002311094.1| mtn21-like protein [Populus trichocarpa] gi|222850914|gb|EEE88461.1| mtn21-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/311 (75%), Positives = 269/311 (86%), Gaps = 3/311 (0%)
Query: 1 MPIHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGV 60
M HPVAEAN+QS FG+L+P EFYA+H V+H+SEYITNSRGL+LFTQWWTPLPP KT+G
Sbjct: 1 MVQHPVAEANDQSPFGTLSPSEFYAKHQVTHNSEYITNSRGLKLFTQWWTPLPPTKTIGC 60
Query: 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL---VAHIPDLNPVVEDA 117
+ VVHGFTGESSW VQLT++LFAK GF CAIDHQGHGFSDGL + HIPD+NPVVED
Sbjct: 61 VAVVHGFTGESSWFVQLTSILFAKHGFVVCAIDHQGHGFSDGLDNLIYHIPDINPVVEDC 120
Query: 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177
+ +F +FR AP+LPAFLYSESLGGAIALYITLRQ+GAWDGLILNGAMCGIS KFKPPW
Sbjct: 121 MRYFKTFRETRAPNLPAFLYSESLGGAIALYITLRQRGAWDGLILNGAMCGISAKFKPPW 180
Query: 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR 237
PLEHLLF VA +VPTW V+PTRGS+P +SFKEEWKRKL +SP R RPRAATA EL+R
Sbjct: 181 PLEHLLFVVAAVVPTWSVIPTRGSIPELSFKEEWKRKLGCASPGRVTMRPRAATAYELMR 240
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEP 297
V ++LQGRFEEV+VP+L+ HGGDDVVCDPA +ELY+RAAS DKTL +Y GMWHQLIGEP
Sbjct: 241 VCKELQGRFEEVDVPLLVVHGGDDVVCDPASAKELYERAASADKTLKMYSGMWHQLIGEP 300
Query: 298 EENVELVFGEM 308
EENV LVFG+M
Sbjct: 301 EENVNLVFGDM 311
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357443267|ref|XP_003591911.1| Monoglyceride lipase [Medicago truncatula] gi|355480959|gb|AES62162.1| Monoglyceride lipase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/307 (76%), Positives = 270/307 (87%), Gaps = 1/307 (0%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HP+AEAN+ S FG+LTP+EFY RHSV+H+SE+ITNSRGL+LFTQWW P PP K +G L
Sbjct: 2 VHPIAEANDHSPFGTLTPEEFYTRHSVTHASEFITNSRGLKLFTQWWIPNPPTKLIGTLA 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VVHG+TGESSW VQL+AV FAK+GFATCAIDHQGHGFSDGL+AHIPD+NPVV+D ISFF+
Sbjct: 62 VVHGYTGESSWTVQLSAVYFAKAGFATCAIDHQGHGFSDGLIAHIPDVNPVVDDCISFFE 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AWDGLILNGAMCGISQKFKPPWPLEH 181
SFR+R LP+FLYSESLGGAIAL ITLR+ G W+GLILNGAMCG+S KFKPPWPLEH
Sbjct: 122 SFRSRFDSSLPSFLYSESLGGAIALLITLRRGGLPWNGLILNGAMCGVSDKFKPPWPLEH 181
Query: 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241
L A ++PTWRVVPTRGS+P VSFKEEWKRKLA++SP+R VARPRAATA ELLR+ R+
Sbjct: 182 FLSLAAAVIPTWRVVPTRGSIPDVSFKEEWKRKLAIASPKRTVARPRAATAQELLRICRE 241
Query: 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENV 301
LQGRFEEV+VP L HGGDD+VCDPACVEELY RA SKDKTL IY GMWHQL+GEPEENV
Sbjct: 242 LQGRFEEVDVPFLAVHGGDDIVCDPACVEELYSRAGSKDKTLKIYDGMWHQLVGEPEENV 301
Query: 302 ELVFGEM 308
ELVFG+M
Sbjct: 302 ELVFGDM 308
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297807987|ref|XP_002871877.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297317714|gb|EFH48136.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/309 (75%), Positives = 275/309 (88%), Gaps = 1/309 (0%)
Query: 1 MPIHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGV 60
M +HP+++A+E + FGSLT DEFYA+HSVSHSS +ITN RGL+LFTQWW+PLPP K +G+
Sbjct: 1 MGLHPISDADEHNPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGI 60
Query: 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120
+ VVHGFTGE+SW +QLT++LFAKSGF TCAIDHQGHGFSDGL+AHIPD+NPVV+D ISF
Sbjct: 61 IAVVHGFTGETSWFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISF 120
Query: 121 FDSFRARHAP-DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
FD FR+R +P DLP FLYSESLGGAIALYI+LRQ+G WDGLILNGAMCGIS KFKPPWPL
Sbjct: 121 FDDFRSRQSPSDLPCFLYSESLGGAIALYISLRQRGVWDGLILNGAMCGISDKFKPPWPL 180
Query: 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS 239
EHLLF VA L+PTWRV+PTRGS+P VSFKE WKRKLA++SPRR VARPRAATA EL+RV
Sbjct: 181 EHLLFVVANLIPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVARPRAATAYELIRVC 240
Query: 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299
+DLQ RFEEVEVP+LI HGG DV+CD ACVEEL++RA S+DKT+ IYP +WHQ+IGE E+
Sbjct: 241 KDLQERFEEVEVPLLIVHGGGDVICDVACVEELHRRAISEDKTIKIYPELWHQMIGESED 300
Query: 300 NVELVFGEM 308
V+LV+G+M
Sbjct: 301 KVDLVYGDM 309
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449449352|ref|XP_004142429.1| PREDICTED: monoglyceride lipase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/312 (75%), Positives = 268/312 (85%), Gaps = 6/312 (1%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HPV +A+EQS FGSLT DEFYARHSV+H SE+ITNSRGL+LFTQWW P PP +G++
Sbjct: 2 VHPVEDADEQSPFGSLTADEFYARHSVTHGSEFITNSRGLKLFTQWWIPQPPVNPIGIIG 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+VHGFTGE+SW +QLTAV F K+GF TCAIDHQGHGFS+GL+ HIPD+NPVVED ISFFD
Sbjct: 62 IVHGFTGETSWFIQLTAVHFTKAGFITCAIDHQGHGFSEGLLYHIPDINPVVEDCISFFD 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGA------WDGLILNGAMCGISQKFKPP 176
SFR RHAP LP+FLYSESLGGAIAL ITLRQK W+G++LNGAMCGIS KFKPP
Sbjct: 122 SFRERHAPSLPSFLYSESLGGAIALLITLRQKSTTENSRPWNGVVLNGAMCGISPKFKPP 181
Query: 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL 236
WPLEH L A L+PTWRVVPTRGS+P VSFK +WKRKLA +SPRR V RPRAATA EL+
Sbjct: 182 WPLEHFLSLAAALLPTWRVVPTRGSIPDVSFKVDWKRKLATASPRRVVTRPRAATAQELM 241
Query: 237 RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE 296
RV R+LQ RFEEVEVP+LI HGGDDV+CDPACVEELY+RA SKDKTL IYPGMWHQLIGE
Sbjct: 242 RVCRELQERFEEVEVPLLISHGGDDVICDPACVEELYRRATSKDKTLKIYPGMWHQLIGE 301
Query: 297 PEENVELVFGEM 308
P+ENVELVFG+M
Sbjct: 302 PKENVELVFGDM 313
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449487195|ref|XP_004157524.1| PREDICTED: monoglyceride lipase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/312 (75%), Positives = 268/312 (85%), Gaps = 6/312 (1%)
Query: 3 IHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLC 62
+HPV +A+E+S FGSLT DEFYARHSV+H S++ITNSRGL+LFTQWW P PP +G++
Sbjct: 2 VHPVEDADERSPFGSLTADEFYARHSVTHGSKFITNSRGLKLFTQWWIPQPPVNPIGIIG 61
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+VHGFTGE+SW +QLTAV F K+GF TCAIDHQGHGFS+GL+ HIPD+NPVVED ISFFD
Sbjct: 62 IVHGFTGETSWFIQLTAVHFTKAGFITCAIDHQGHGFSEGLLYHIPDINPVVEDCISFFD 121
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGA------WDGLILNGAMCGISQKFKPP 176
SFR RHAP LP+FLYSESLGGAIAL ITLRQK W+G++LNGAMCGIS KFKPP
Sbjct: 122 SFRERHAPSLPSFLYSESLGGAIALLITLRQKSTTENSRPWNGVVLNGAMCGISPKFKPP 181
Query: 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL 236
WPLEH L A L+PTWRVVPTRGS+P VSFK +WKRKLA +SPRR V RPRAATA EL+
Sbjct: 182 WPLEHFLSLAAALLPTWRVVPTRGSIPDVSFKVDWKRKLATASPRRVVTRPRAATAQELM 241
Query: 237 RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE 296
RV R+LQ RFEEVEVP+LI HGGDDV+CDPACVEELY+RA SKDKTL IYPGMWHQLIGE
Sbjct: 242 RVCRELQERFEEVEVPLLISHGGDDVICDPACVEELYRRATSKDKTLKIYPGMWHQLIGE 301
Query: 297 PEENVELVFGEM 308
P+ENVELVFG+M
Sbjct: 302 PKENVELVFGDM 313
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 308 | ||||||
| TAIR|locus:2150245 | 330 | AT5G19290 "AT5G19290" [Arabido | 1.0 | 0.933 | 0.728 | 2.2e-128 | |
| TAIR|locus:2147790 | 327 | AT5G14980 "AT5G14980" [Arabido | 0.990 | 0.932 | 0.700 | 6.9e-118 | |
| TAIR|locus:2197369 | 324 | AT1G11090 [Arabidopsis thalian | 0.951 | 0.904 | 0.385 | 9.9e-55 | |
| TAIR|locus:2039822 | 317 | AT2G39410 [Arabidopsis thalian | 0.896 | 0.870 | 0.369 | 3.8e-46 | |
| TAIR|locus:2039677 | 317 | AT2G39420 "AT2G39420" [Arabido | 0.902 | 0.876 | 0.355 | 2.1e-45 | |
| TAIR|locus:2081710 | 348 | AT3G62860 "AT3G62860" [Arabido | 0.892 | 0.790 | 0.35 | 2.1e-45 | |
| TAIR|locus:2043278 | 351 | AT2G47630 "AT2G47630" [Arabido | 0.899 | 0.789 | 0.35 | 2.2e-43 | |
| TAIR|locus:2039812 | 311 | AT2G39400 [Arabidopsis thalian | 0.899 | 0.890 | 0.339 | 4e-42 | |
| TAIR|locus:2100701 | 312 | AT3G55180 "AT3G55180" [Arabido | 0.905 | 0.894 | 0.333 | 8.4e-42 | |
| TAIR|locus:2031427 | 382 | AT1G77420 "AT1G77420" [Arabido | 0.886 | 0.714 | 0.355 | 5.9e-41 |
| TAIR|locus:2150245 AT5G19290 "AT5G19290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
Identities = 225/309 (72%), Positives = 263/309 (85%)
Query: 1 MPIHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGV 60
M +HP+++ANE + FGSLT DEFYA+HSVSHSS +ITN RGL+LFTQWW+PLPP K +G+
Sbjct: 1 MGLHPISDANEHNPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGI 60
Query: 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120
+ VVHGFTGESSW +QLT++LFAKSGF TCAIDHQGHGFSDGL+AHIPD+NPVV+D ISF
Sbjct: 61 IAVVHGFTGESSWFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISF 120
Query: 121 FDSFRARHAP-DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
FD FR+R P DLP FLYSESLGGAIALYI+LRQ+G WDGLILNGAMCGIS KFKPPWPL
Sbjct: 121 FDDFRSRQTPSDLPCFLYSESLGGAIALYISLRQRGVWDGLILNGAMCGISDKFKPPWPL 180
Query: 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSXXXXXXXXXXXXXLELLRVS 239
EHLLF VA L+PTWRV+PTRGS+P VSFKE WKRKLA++S EL+RV
Sbjct: 181 EHLLFVVANLIPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVAKPRAATAYELIRVC 240
Query: 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299
+DLQGRFEEVEVP+LI HGG DVVCD ACVEEL++RA S+DKT+ IYP +WHQ+IGE EE
Sbjct: 241 KDLQGRFEEVEVPLLIVHGGGDVVCDVACVEELHRRAISEDKTIKIYPELWHQMIGESEE 300
Query: 300 NVELVFGEM 308
V+LV+G+M
Sbjct: 301 KVDLVYGDM 309
|
|
| TAIR|locus:2147790 AT5G14980 "AT5G14980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 218/311 (70%), Positives = 251/311 (80%)
Query: 1 MPIHPVAEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPL--PPAKTL 58
M +HPV+EAN S FGSL+ EFY+RHSV+HSS Y+TN GL+LFTQWWTPL PP L
Sbjct: 1 MGLHPVSEANASSPFGSLSAAEFYSRHSVTHSSAYVTNPTGLKLFTQWWTPLNRPP---L 57
Query: 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
G++ VVHGFTGESSW +QLT+VLFAKSG+ TCAIDHQGHGFSDGL AHIP++N +V+D I
Sbjct: 58 GLIAVVHGFTGESSWFLQLTSVLFAKSGYLTCAIDHQGHGFSDGLTAHIPNINLIVDDCI 117
Query: 119 SFFDSFRARHAPD-LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177
SFFD FR RHA LPAFLYSESLGGAIALYITLRQK W+GLIL+GAMC IS KFKPPW
Sbjct: 118 SFFDDFRKRHASSFLPAFLYSESLGGAIALYITLRQKHQWNGLILSGAMCSISHKFKPPW 177
Query: 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSXXXXXXXXXXXXXLELLR 237
PL+HLL A L+PTWRVVPTRGS+ VSFKE WKRKLA ++ EL+R
Sbjct: 178 PLQHLLTLAATLIPTWRVVPTRGSIAGVSFKEPWKRKLAYANPNRTVGKPRAATAYELVR 237
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEP 297
V DLQ RFEEVEVP++I HG DDVVCDPA VEELY+R +S+DKT+ IYPGMWHQLIGE
Sbjct: 238 VCEDLQNRFEEVEVPLMIVHGRDDVVCDPASVEELYRRCSSRDKTIKIYPGMWHQLIGES 297
Query: 298 EENVELVFGEM 308
EENV+LVFG++
Sbjct: 298 EENVDLVFGDV 308
|
|
| TAIR|locus:2197369 AT1G11090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 114/296 (38%), Positives = 171/296 (57%)
Query: 11 EQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGE 70
E + +G + ++++ + S + T+ RGL LFT+ W P + G++ +VHG+ +
Sbjct: 9 EINFWGETSEEDYFNLKGIIGSKSFFTSPRGLNLFTRSWLPSSSSPPRGLIFMVHGYGND 68
Query: 71 SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA- 129
SW Q T + A+ GFA A+D +GHG SDG+ A++P ++ VV+D ISFF+S +
Sbjct: 69 VSWTFQSTPIFLAQMGFACFALDIEGHGRSDGVRAYVPSVDLVVDDIISFFNSIKQNPKF 128
Query: 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189
LP FL+ ES+GGAI L I +DG +L MC IS K +P WP++ L ++
Sbjct: 129 QGLPRFLFGESMGGAICLLIQFADPLGFDGAVLVAPMCKISDKVRPKWPVDQFLIMISRF 188
Query: 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEV 249
+PTW +VPT L S K E K+ +A + +ELLRV+ L + ++V
Sbjct: 189 LPTWAIVPTEDLLEK-SIKVEEKKPIAKRNPMRYNEKPRLGTVMELLRVTDYLGKKLKDV 247
Query: 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELV 304
+P +I HG D V DP ELY+ A SKDKTL IY GM H ++ GEP++N+E+V
Sbjct: 248 SIPFIIVHGSADAVTDPEVSRELYEHAKSKDKTLKIYDGMMHSMLFGEPDDNIEIV 303
|
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| TAIR|locus:2039822 AT2G39410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 105/284 (36%), Positives = 160/284 (56%)
Query: 29 VSHSSEYITNSRGLRLFTQWWTPLP-PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF 87
+ + +I N+RG +LFT W P + L LC HG+ E S + TA K+GF
Sbjct: 8 IKYEESFIKNTRGFKLFTCRWLPTNREPRALVFLC--HGYGMECSITMNSTARRLVKAGF 65
Query: 88 ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIA 146
A +D++GHG SDGL A+I + + +V+D + + + R F+ ES+GGA+
Sbjct: 66 AVYGMDYEGHGKSDGLSAYISNFDRLVDDVSTHYTAICEREENKWKMRFMLGESMGGAVV 125
Query: 147 LYITLRQKGAWDGLILNGAMCGISQKFKP-PWPLEHLLFTVAWLVPTWRVVPTRGSLPMV 205
L + + WDG IL MC I+++ KP P+ + L ++ ++P W+++P++ + +
Sbjct: 126 LLLGRKNPDFWDGAILVAPMCKIAEEMKPSPFVISILTKLIS-IIPKWKIIPSQDIIE-I 183
Query: 206 SFKEEWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265
S+KE RK + ELLR+S DL+ R +EV +P L+ HG DD V D
Sbjct: 184 SYKEPEIRKQVRENPLCSKGRPRLKTAYELLRISNDLEKRLQEVSLPFLVLHGDDDKVTD 243
Query: 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
A +ELYK A S DKTL +YPGMWH L+ GE EN+E+VF ++
Sbjct: 244 KAVSQELYKVALSADKTLKLYPGMWHGLLTGETPENIEIVFADV 287
|
|
| TAIR|locus:2039677 AT2G39420 "AT2G39420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 101/284 (35%), Positives = 159/284 (55%)
Query: 28 SVSHSSEYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQLTAVLFAKSG 86
++ + +I N+RG++LFT W P K L +C HG+ E S + TA K+G
Sbjct: 7 NIKYEESFIKNTRGMKLFTCKWVPAKQEPKALVFIC--HGYAMECSITMNSTARRLVKAG 64
Query: 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAI 145
FA ID++GHG SDGL A++P+ + +V+D + + S + FL ES+GGA+
Sbjct: 65 FAVYGIDYEGHGKSDGLSAYVPNFDHLVDDVSTHYTSICEKEENKGKMRFLLGESMGGAV 124
Query: 146 ALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMV 205
L + ++ WDG +L MC I+++ KP + +L ++ ++P+W+++P + +
Sbjct: 125 LLLLHRKKPQFWDGAVLVAPMCKIAEEMKPSPLVISILAKLSGVIPSWKIIPGQDIIE-T 183
Query: 206 SFKEEWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265
+FK+ RK + ELLRVS DL+ R EV +P ++ HG DD V D
Sbjct: 184 AFKQPEIRKQVRENPYCYKGRPRLKTAYELLRVSTDLEKRLNEVSLPFIVLHGEDDKVTD 243
Query: 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
A +LY+ A+S DKT +YPGMWH L+ GE EN+E VF ++
Sbjct: 244 KAVSRQLYEVASSSDKTFKLYPGMWHGLLYGETPENIETVFADI 287
|
|
| TAIR|locus:2081710 AT3G62860 "AT3G62860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 98/280 (35%), Positives = 156/280 (55%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATC 90
+ EYI NSR + LF W P + L LC HG+ E S ++ + A +G+A
Sbjct: 8 YEEEYIKNSRDVELFACRWLPSSSPRALVFLC--HGYGMECSSFMRECGIRLASAGYAVF 65
Query: 91 AIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYI 149
+D++GHG S G +I + +V D ++ S A+ + FLY ES+GGA+AL +
Sbjct: 66 GMDYEGHGRSKGARCYIKKFSNIVNDCFDYYTSISAQEEYKEKGRFLYGESMGGAVALLL 125
Query: 150 TLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKE 209
+ W+G +L MC IS+K KP + +LL V ++P W++VPT+ + +FK+
Sbjct: 126 HKKDPSFWNGALLVAPMCKISEKVKPHPVVINLLTRVEDIIPKWKIVPTKDVID-AAFKD 184
Query: 210 EWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269
KR+ ++ LE+LR S DL+ E+ +P + HG D+V DP
Sbjct: 185 PVKREEIRNNKLIYQDKPRLKTALEMLRTSMDLEDTLHEITLPFFVLHGEADIVTDPEIS 244
Query: 270 EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
+ L+++A+++DKT+ +YPGMWH L GEP+ NV+LVF ++
Sbjct: 245 KALFEKASTRDKTIKLYPGMWHGLTSGEPDANVDLVFADI 284
|
|
| TAIR|locus:2043278 AT2G47630 "AT2G47630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 98/280 (35%), Positives = 154/280 (55%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATC 90
+ EY+ NSRG+ LF W P + ++ + HG+ E S ++ + A +G+A
Sbjct: 8 YHEEYVRNSRGVELFACRWIPSSSSSPKALVFLCHGYGMECSDSMKECGIRLASAGYAVF 67
Query: 91 AIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYI 149
+D++GHG S G +I VV D ++ S A+ D FLY ES+GGA+ L +
Sbjct: 68 GMDYEGHGRSMGSRCYIKKFANVVNDCYDYYTSICAQEEYMDKGRFLYGESMGGAVTLLL 127
Query: 150 TLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKE 209
+ W+G IL MC IS+K KP + +LL V ++P W++VPT+ + +FK+
Sbjct: 128 HKKDPLFWNGAILVAPMCKISEKVKPHPIVINLLTRVEEIIPKWKIVPTKDVID-AAFKD 186
Query: 210 EWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269
KR+ ++ LE+LR S +L+ E+ +P + HG D V DP
Sbjct: 187 LVKREEVRNNKLIYQDKPRLKTALEMLRTSMNLEDTLHEITMPFFVLHGEADTVTDPEVS 246
Query: 270 EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
+ LY++A+++DKTL +YPGMWH L GEP+ NV+LVF ++
Sbjct: 247 KALYEKASTRDKTLKLYPGMWHALTSGEPDCNVDLVFADI 286
|
|
| TAIR|locus:2039812 AT2G39400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 96/283 (33%), Positives = 152/283 (53%)
Query: 29 VSHSSEYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF 87
V + +++ NSRG++LFT W P+ K L LC HG+ ESS + A A +GF
Sbjct: 2 VMYEEDFVLNSRGMKLFTCVWKPVKQEPKALLFLC--HGYAMESSITMNSAATRLANAGF 59
Query: 88 ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIA 146
A +D++GHG S+GL +I + + +V+D + + + R FL ES+GGA+
Sbjct: 60 AVYGMDYEGHGKSEGLNGYISNFDDLVDDVSNHYSTICEREENKGKMRFLLGESMGGAVV 119
Query: 147 LYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206
L + ++ WDG +L MC ++ + KP + +L +A +PTW++VP + ++
Sbjct: 120 LLLARKKPDFWDGAVLVAPMCKLADEIKPHPVVISILIKLAKFIPTWKIVPGNDIID-IA 178
Query: 207 FKEEWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266
KE R + +LL VS DL+ +V +P ++ HG DD V D
Sbjct: 179 IKEPHIRNQVRENKYCYKGRPRLNTAYQLLLVSLDLEKNLHQVSIPFIVLHGEDDKVTDK 238
Query: 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
+ + LY+ A+S DKT +YP MWH L+ GE EN E+VFG++
Sbjct: 239 SISKMLYEVASSSDKTFKLYPKMWHALLYGETNENSEIVFGDI 281
|
|
| TAIR|locus:2100701 AT3G55180 "AT3G55180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 94/282 (33%), Positives = 151/282 (53%)
Query: 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFA 88
V + +Y++NSRG++LFT W + ++ + HG+ ESS + TAV A +GF+
Sbjct: 2 VMYKEDYVSNSRGIQLFTCSWKQEEQQEPKALIFLCHGYAMESSITMSSTAVRLANAGFS 61
Query: 89 TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSF-RARHAPDLPAFLYSESLGGAIAL 147
+D++GHG S GL ++ + +V+D S + S FL ES+GGA+ L
Sbjct: 62 VYGMDYEGHGKSGGLNGYVKKFDDLVQDVSSHYSSICELEENKGKMRFLMGESMGGAVVL 121
Query: 148 YITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207
+ ++ WDG +L MC +++ KP + L + +PTW++VP+ + V+F
Sbjct: 122 LLERKKPNFWDGAVLVAPMCKLAEDIKPHPMVISFLTKLTRFIPTWKIVPSNDIID-VAF 180
Query: 208 KEEWKRKLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267
KE RK + +LL VS DL+ ++V +P ++ HG DD V D
Sbjct: 181 KETHIRKQVRDNEYCYKGRPRLKTAHQLLMVSLDLEKNLDQVSMPFIVLHGEDDKVTDKN 240
Query: 268 CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
+ LY+ A+S DKT +YP MWH L+ GE EN+E+VF ++
Sbjct: 241 VSKLLYEVASSSDKTFKLYPNMWHGLLYGESPENLEIVFSDI 282
|
|
| TAIR|locus:2031427 AT1G77420 "AT1G77420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 98/276 (35%), Positives = 147/276 (53%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
Y NS+G +F + W P + +C HG+ ++ A A G+ AIDH
Sbjct: 97 YERNSKGEDIFCKSWLPKSGDEIKAAVCFCHGYGSTCTFFFDGIAKQIAGFGYGVYAIDH 156
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR-HAPDLPAFLYSESLGGAIALYITLRQ 153
G G SDGL HIP + + ++AI F + R +LP FL +S+GGA+AL I L++
Sbjct: 157 PGFGLSDGLHGHIPSFDDLADNAIEQFTKMKGRSELRNLPRFLLGQSMGGAVALKIHLKE 216
Query: 154 KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213
AWDGLIL MC IS+ KPP + L ++ L P ++ P R L F++ KR
Sbjct: 217 PQAWDGLILVAPMCKISEDVKPPPLVLKTLILMSTLFPKAKLFPKR-DLSDFFFRDLSKR 275
Query: 214 KLALSSXXXXXXXXXXXXXLELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
KL +ELL +RD++ + ++V +P+LI HG D V DP + L+
Sbjct: 276 KLCEYDVICYDDQTRLKTAVELLNATRDIEMQVDKVSLPLLILHGDTDKVTDPTVSKFLH 335
Query: 274 KRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308
K A S+DKTL +YPG +H ++ G+ +EN+ V ++
Sbjct: 336 KHAVSQDKTLKLYPGGYHCILEGDTDENIFTVINDI 371
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_X002025 | hypothetical protein (331 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.31260002 | Predicted protein (138 aa) | • | 0.451 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 308 | |||
| PLN02298 | 330 | PLN02298, PLN02298, hydrolase, alpha/beta fold fam | 1e-100 | |
| PLN02385 | 349 | PLN02385, PLN02385, hydrolase; alpha/beta fold fam | 2e-70 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 7e-32 | |
| PLN02652 | 395 | PLN02652, PLN02652, hydrolase; alpha/beta fold fam | 3e-30 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 4e-19 | |
| pfam12146 | 80 | pfam12146, Hydrolase_4, Putative lysophospholipase | 4e-19 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-12 | |
| TIGR01607 | 332 | TIGR01607, PST-A, Plasmodium subtelomeric family ( | 4e-10 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-09 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-04 | |
| PRK10749 | 330 | PRK10749, PRK10749, lysophospholipase L2; Provisio | 6e-04 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 8e-04 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 0.003 |
| >gnl|CDD|165939 PLN02298, PLN02298, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = e-100
Identities = 126/304 (41%), Positives = 181/304 (59%), Gaps = 3/304 (0%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
A E +G +E+YA + S + T+ RGL LFT+ W P + ++ +VHG
Sbjct: 8 ATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHG 67
Query: 67 FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126
+ + SW Q TA+ A+ GFA A+D +GHG S+GL A++P+++ VVED +SFF+S +
Sbjct: 68 YGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQ 127
Query: 127 RHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185
R LP FLY ES+GGAI L I L +DG +L MC IS K +PPWP+ +L
Sbjct: 128 REEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTF 187
Query: 186 VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245
VA +PT +VPT L S K K+ +A +P R +PR T +ELLRV+ L +
Sbjct: 188 VARFLPTLAIVPT-ADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKK 246
Query: 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELV 304
++V +P ++ HG DVV DP LY+ A S+DKT+ IY GM H L+ GEP+EN+E+V
Sbjct: 247 LKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIV 306
Query: 305 FGEM 308
++
Sbjct: 307 RRDI 310
|
Length = 330 |
| >gnl|CDD|215216 PLN02385, PLN02385, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 221 bits (565), Expect = 2e-70
Identities = 96/273 (35%), Positives = 159/273 (58%), Gaps = 4/273 (1%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
Y NSRG+ +F++ W P ++ +C HG+ ++ + A A SG+ A+D+
Sbjct: 65 YEVNSRGVEIFSKSWLP-ENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDY 123
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ 153
G G S+GL +IP + +V+D I + + LP+FL+ +S+GGA+AL + L+Q
Sbjct: 124 PGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ 183
Query: 154 KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213
AWDG IL MC I+ PP + +L +A L+P ++VP + L ++F++ KR
Sbjct: 184 PNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQK-DLAELAFRDLKKR 242
Query: 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
K+A + +PR TA+ELLR +++++ + EEV +P+LI HG D V DP+ + LY
Sbjct: 243 KMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLY 302
Query: 274 KRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305
++A+S DK L +Y +H ++ GEP+E + V
Sbjct: 303 EKASSSDKKLKLYEDAYHSILEGEPDEMIFQVL 335
|
Length = 349 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 7e-32
Identities = 85/289 (29%), Positives = 120/289 (41%), Gaps = 27/289 (9%)
Query: 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93
Y T + G RL + W P K GV+ +VHG GE S + A A GF A+D
Sbjct: 12 GYFTGADGTRLRYRTWAAPEPPK--GVVVLVHGL-GEHSGRYEELADDLAARGFDVYALD 68
Query: 94 HQGHGFS-DGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152
+GHG S G H+ V+D +F ++ P LP FL S+GG IAL R
Sbjct: 69 LRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPD-PGLPVFLLGHSMGGLIALLYLAR 127
Query: 153 QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK 212
DGL+L+ + L+ L R+ P LP+ S E
Sbjct: 128 YPPRIDGLVLSSPA------LGLGGAILRLILARLALKLLGRIRP---KLPVDSNLLEGV 178
Query: 213 RKLALSSPRRPVARPRAATAL-----------ELLRVSRDLQGRFEE-VEVPMLICHGGD 260
LS VA A + L R R + +P+L+ GGD
Sbjct: 179 LTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGD 238
Query: 261 D-VVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
D VV + + ++RA S DK L + PG +H+L+ EP+ E V ++
Sbjct: 239 DRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDI 287
|
Length = 298 |
| >gnl|CDD|215352 PLN02652, PLN02652, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 3e-30
Identities = 87/278 (31%), Positives = 129/278 (46%), Gaps = 35/278 (12%)
Query: 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95
+R LF + W P + G+L ++HG S + L + GF A+D
Sbjct: 115 FYGARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFAKQLTS-CGFGVYAMDWI 172
Query: 96 GHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL--RQ 153
GHG SDGL ++P L+ VVED +F + R+ + P +P FL+ S GGA+ L
Sbjct: 173 GHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN-PGVPCFLFGHSTGGAVVLKAASYPSI 231
Query: 154 KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213
+ +G++L + + KP P+ V + P + +V P FK KR
Sbjct: 232 EDKLEGIVLTSP----ALRVKPAHPI------VGAVAPIFSLV-----APRFQFKGANKR 276
Query: 214 KLALSSPRRPVA------RP-------RAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260
+ +S R P A P R T E+LR+S L F+ V VP ++ HG
Sbjct: 277 GIPVS--RDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTA 334
Query: 261 DVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298
D V DP ++LY AAS+ K + +Y G H L+ EPE
Sbjct: 335 DRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPE 372
|
Length = 395 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 4e-19
Identities = 58/277 (20%), Positives = 113/277 (40%), Gaps = 11/277 (3%)
Query: 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCA 91
S+ + N ++ ++W P+ K L + + HG GE S + A + G +
Sbjct: 1 SANCMFNLDNDYIYCKYWKPITYPKAL--VFISHG-AGEHSGRYEELAENISSLGILVFS 57
Query: 92 IDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151
DH GHG S+G I D V D + + ++ + P +P FL S+G I++
Sbjct: 58 HDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTY-PGVPVFLLGHSMGATISILAAY 116
Query: 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211
+ + +IL + + L+ ++ P S M E +
Sbjct: 117 KNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDM---DEVY 173
Query: 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271
K + P + +A A ++L+ + ++ +++ P+LI G ++ + D +
Sbjct: 174 KYQ---YDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYY 230
Query: 272 LYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ A ++ + IY G H L E +E + V E+
Sbjct: 231 FMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEI 266
|
Length = 276 |
| >gnl|CDD|221442 pfam12146, Hydrolase_4, Putative lysophospholipase | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 4e-19
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFS 100
GL+LF + W P V+ +VHG GE S A A G+A A DH+GHG S
Sbjct: 1 GLKLFYRRWLP-AGPPPKAVVVLVHGG-GEHSGRYAELAEELAAQGYAVYAYDHRGHGRS 58
Query: 101 DGLVAHIPDLNPVVEDAISFFD 122
G H+P + V+D +F +
Sbjct: 59 PGKRGHVPSFDDYVDDLDTFVE 80
|
This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. Length = 80 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 3e-12
Identities = 55/239 (23%), Positives = 73/239 (30%), Gaps = 62/239 (25%)
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123
+HG G S+ + A A G+ A D GHG SDG L D + D+
Sbjct: 4 LHGAGG-SAESWRPLAEALAA-GYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALLDA 61
Query: 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183
P L SLGGA+AL R+ GL+L
Sbjct: 62 LGLG-----PVVLVGHSLGGAVALAAAARRPERVAGLVLISPP----------------- 99
Query: 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATA--LELLRVSRD 241
L +A AA L + D
Sbjct: 100 ---------------------------------LRDLEELLAADAAALLALLRAALLDAD 126
Query: 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE-PEE 299
L+ + VP+L+ HG DD + P L + L + PG H E PEE
Sbjct: 127 LREALARLTVPVLVIHGEDDPLVPPEAARRLAEA--LPGAELVVLPGAGHLPHLEHPEE 183
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|162444 TIGR01607, PST-A, Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 4e-10
Identities = 68/329 (20%), Positives = 106/329 (32%), Gaps = 75/329 (22%)
Query: 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG---------------------------- 69
N GL L T W +G++ ++HG
Sbjct: 4 NKDGLLLKTYSWIV---KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYY 60
Query: 70 --ESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG---LVAHIPDLNPVVEDAISFFD-- 122
+ SWI F K+G++ +D QGHG SDG L HI + +V D I + +
Sbjct: 61 IYKDSWIEN-----FNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRI 115
Query: 123 -----------------SFRARHAPDLPAFLYSESLGGAIALYI--------TLRQKGAW 157
LP ++ S+GG IAL + K
Sbjct: 116 NDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNI 175
Query: 158 DGLILNGAMCGISQKFKP-PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF-KEEWKRKL 215
G I M I + ++ V + RV PT + + K + +
Sbjct: 176 KGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMS--RVFPTFRISKKIRYEKSPYVNDI 233
Query: 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEV--EVPMLICHGGDDVVCDPACVEELY 273
R A EL++ + L + + ++P+L H D VC Y
Sbjct: 234 IKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFY 293
Query: 274 KRAASKDKTLSIYPGMWHQLIGEP-EENV 301
+ + +K L M H + EP E V
Sbjct: 294 NKLSISNKELHTLEDMDHVITIEPGNEEV 322
|
This model represents a paralogous family of genes in Plasmodium falciparum and Plasmodium yoelii which are closely related to various phospholipases and lysophospholipases of plants as well as generally being related to the alpha/beta-fold superfamily of hydrolases. These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. Length = 332 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.7 bits (138), Expect = 1e-09
Identities = 56/254 (22%), Positives = 78/254 (30%), Gaps = 25/254 (9%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HGF G SS W + + + A D +GHG SD L+ +D + D
Sbjct: 27 LHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD---PAGYSLSAYADDLAALLD 83
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ----------- 171
+ L S+GGA+AL + LR GL+L G
Sbjct: 84 ALGLE-----KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138
Query: 172 ----KFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARP 227
A L + + + L ++ A
Sbjct: 139 APLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR 198
Query: 228 RAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP 287
A L + RDL+ + VP LI HG DD V A D L + P
Sbjct: 199 ADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARR-LAAALPNDARLVVIP 257
Query: 288 GMWHQLIGEPEENV 301
G H E E
Sbjct: 258 GAGHFPHLEAPEAF 271
|
Length = 282 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 17/104 (16%)
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
++HG G A A G+ A+D+ GHG S G PD +
Sbjct: 4 LLHGA-GGDPEAYAPLARALASRGYNVVAVDYPGHGASLGA----PDA-----------E 47
Query: 123 SFRARHAPDL-PAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165
+ A D L SLGG +AL + R ++L
Sbjct: 48 AVLADAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAG 91
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|182697 PRK10749, PRK10749, lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 85 SGFATCAIDHQGHGFSDGLVA-----HIPDLNPVVEDAISFFDS------FRARHAPDLP 133
G+ IDH+G G S L+ H+ N V+D +F+ +R R
Sbjct: 80 LGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKR------ 133
Query: 134 AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183
+ + S+GGAI R G +D + L M GI P W +L
Sbjct: 134 -YALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRIL 181
|
Length = 330 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 8e-04
Identities = 37/186 (19%), Positives = 56/186 (30%), Gaps = 15/186 (8%)
Query: 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIA 146
F A D +G G S + +D ++ L S+GG IA
Sbjct: 1 FDVIAFDLRGFGRSS---PPKDFADYRFDDLAEDLEALL-DALGLDKVNLVGHSMGGLIA 56
Query: 147 LYITLRQKGAWDGLILNGAM--CGISQKFKPPWPLEHLLF--TVAWLVPT-------WRV 195
L + L+L G + G+S P L LL L +
Sbjct: 57 LAYAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIK 116
Query: 196 VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255
P VS + +L +A + D ++++VP LI
Sbjct: 117 QFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLI 176
Query: 256 CHGGDD 261
G DD
Sbjct: 177 IWGDDD 182
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.003
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 226 RPRAATALELL-RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLS 284
PR A+ L D ++ VP+LI HG D V P E L L
Sbjct: 79 DPRVKAAVVLAAGDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAA-LPGPAELV 137
Query: 285 IYPGMWH 291
+ G H
Sbjct: 138 VIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.98 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.94 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.93 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.93 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.93 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.93 | |
| PRK10566 | 249 | esterase; Provisional | 99.92 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.92 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.91 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.9 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.9 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.9 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.89 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.89 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.89 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.89 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.89 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.87 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.85 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.85 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.85 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.84 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.84 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.84 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.83 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.83 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.82 | |
| PLN00021 | 313 | chlorophyllase | 99.82 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.82 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.82 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.81 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.8 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.79 | |
| PRK10115 | 686 | protease 2; Provisional | 99.79 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.78 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.78 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.78 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.77 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.77 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.76 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.75 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.74 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.74 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.73 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.71 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.71 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.7 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.7 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.68 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.68 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.66 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.66 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.65 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.64 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.63 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.6 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.58 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.58 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.58 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.58 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.57 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.57 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.56 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.55 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.55 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.51 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.49 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.49 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.46 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.44 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.43 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.41 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.4 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.4 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.4 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.39 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.39 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.39 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.36 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.36 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.34 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.33 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.3 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.3 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.26 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.21 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.2 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.2 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.17 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.15 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.14 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.13 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.13 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.11 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.09 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 99.06 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.06 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.04 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.03 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.02 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.0 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.96 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.95 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.94 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.91 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.88 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.87 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.86 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.78 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.76 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.73 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.73 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.7 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.67 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.66 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.66 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.65 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.65 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 98.64 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.61 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.6 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.49 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.49 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.44 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.4 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.39 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.39 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.29 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.26 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.17 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 98.16 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 98.16 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 98.15 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.12 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.09 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.03 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.01 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.97 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.97 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.94 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.87 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.86 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.81 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.81 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.76 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.67 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.62 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.54 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.5 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.44 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.42 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 97.4 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 97.4 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.32 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.26 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.18 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.08 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.97 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 96.87 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 96.83 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.82 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 96.78 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.69 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 96.55 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.5 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.26 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 96.22 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.09 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.0 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 95.8 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 95.7 | |
| PLN02408 | 365 | phospholipase A1 | 95.66 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.63 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.57 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.43 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 95.39 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 95.34 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.34 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 95.33 | |
| PLN02847 | 633 | triacylglycerol lipase | 95.23 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.23 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.93 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.92 | |
| PLN02761 | 527 | lipase class 3 family protein | 94.74 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 94.73 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 94.52 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 94.52 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.45 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 93.59 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 93.37 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 93.04 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 92.83 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 92.2 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 91.98 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 91.84 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 91.47 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 91.06 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 88.94 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 88.89 | |
| ) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor" target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF06309">PF06309 | 127 | Torsin: Torsin; InterPro: IPR010448 This family co | 87.34 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 86.58 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 86.27 | |
| COG3340 | 224 | PepE Peptidase E [Amino acid transport and metabol | 85.31 |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-46 Score=273.59 Aligned_cols=298 Identities=50% Similarity=0.853 Sum_probs=274.7
Q ss_pred cccCccCCCCcccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeE
Q 035721 10 NEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFAT 89 (308)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v 89 (308)
...++|..+..++++...++.....++++.+|.++....|.|..+.+++..|+++||++..+.+.++.++..|+..||.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v 85 (313)
T KOG1455|consen 6 NRRSLAGELSEEEYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAV 85 (313)
T ss_pred cCcccccccchhhhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeE
Confidence 34566778888888888888889999999999999999999977657789999999999998777889999999999999
Q ss_pred EEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 90 CAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 90 ~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|++|||.|++...+..+++..++|+...++.+..+.. .+.+..++||||||.+++.++.++|+..+|+|+++|.+.
T Consensus 86 ~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 86 YAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 9999999999999988888999999999999998766544 777999999999999999999999999999999999999
Q ss_pred CCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCC
Q 035721 169 ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE 248 (308)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (308)
..+...+.......+..+..++|+|...+.. ......+++++.+.....++..+...+++++..++++...++.+.+.+
T Consensus 166 i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~-d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~ 244 (313)
T KOG1455|consen 166 ISEDTKPHPPVISILTLLSKLIPTWKIVPTK-DIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE 244 (313)
T ss_pred cCCccCCCcHHHHHHHHHHHhCCceeecCCc-cccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999977777 788999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|.+++||+.|.+++++.++.+++...+.+.++.+|||.-|.++ .++++..+.|+.+|
T Consensus 245 vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI 305 (313)
T KOG1455|consen 245 VTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDI 305 (313)
T ss_pred ccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHH
Confidence 9999999999999999999999999999888999999999999999 68888787777653
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=273.37 Aligned_cols=301 Identities=41% Similarity=0.745 Sum_probs=212.7
Q ss_pred cCCCCCccc-CccCCCCcccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHH
Q 035721 4 HPVAEANEQ-SLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLF 82 (308)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l 82 (308)
|+...+.++ ..|...+.++++...++..+..++...||.+|+|+.|.+....+++++|||+||++.+..+.+..++..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L 83 (330)
T PLN02298 4 MSDHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFL 83 (330)
T ss_pred cCCCCCCCCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHH
Confidence 334444444 3477788889998889999999999999999999999876432457899999999876554567788889
Q ss_pred HHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEE
Q 035721 83 AKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLI 161 (308)
Q Consensus 83 ~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 161 (308)
.++||+|+++|+||||.|++......+++.+++|+.++++.+..... ...+++|+||||||.+++.++.++|++|+++|
T Consensus 84 ~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lv 163 (330)
T PLN02298 84 AQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAV 163 (330)
T ss_pred HhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEE
Confidence 98999999999999999986555445788899999999999986421 34589999999999999999999999999999
Q ss_pred EeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH
Q 035721 162 LNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241 (308)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
+++|...........+.............+........ ..................++..+..................
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PLN02298 164 LVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTA-DLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDY 242 (330)
T ss_pred EecccccCCcccCCchHHHHHHHHHHHHCCCCccccCC-CcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHH
Confidence 99997654432222222222223333333332211111 11111111122222222233333333334444444444344
Q ss_pred hhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 242 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
....+.++++|+|+++|++|.++|++.++.+++.++.+++++++++++||.++ ++|+...+.+.
T Consensus 243 ~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~ 307 (330)
T PLN02298 243 LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVR 307 (330)
T ss_pred HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHH
Confidence 55678899999999999999999999999999988656799999999999999 88876544443
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=272.14 Aligned_cols=274 Identities=35% Similarity=0.660 Sum_probs=196.8
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
++.+++.++.+.+|.+|+|..|+|.++ .++++|||+||++++...+|+.+++.|+++||+|+++|+||||.|++.....
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 136 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS-RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYI 136 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC-CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCc
Confidence 455667778889999999999998654 4689999999999887656788999999889999999999999998765544
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+++++++|+.++++.+..... ...+++|+||||||.+++.++.++|++++++|+++|....................+
T Consensus 137 ~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T PLN02385 137 PSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILL 216 (349)
T ss_pred CCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHH
Confidence 5888999999999998875421 344799999999999999999999999999999998765443222222222333333
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
....+........ .+....+.+.............+...........++....+....+.++++|+|+++|++|.++++
T Consensus 217 ~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 217 ANLLPKAKLVPQK-DLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHCCCceecCCC-ccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 3333332221111 122222222222111111122222233444445555544556677889999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
+.++.+++.+..+++++++++++||.++ ++|+++.+.
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~ 333 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQ 333 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHH
Confidence 9999999988656789999999999999 899874333
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=235.05 Aligned_cols=261 Identities=18% Similarity=0.274 Sum_probs=175.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++...||.+|+|+.|.|.. .++++|+++||+++++. .|..+++.|.++||+|+++|+||||.|++......++.+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~--~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT--YPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eeecCCCCEEEEEeccCCC--CCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 5667899999999998853 45788888899998877 67899999999999999999999999986443333556667
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh-hCCCc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW-LVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 193 (308)
+|+.+.++.+.... ...+++++|||+||.+|+.++.++|++++++|+++|...... ............. ..+..
T Consensus 81 ~d~~~~l~~~~~~~-~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 155 (276)
T PHA02857 81 RDVVQHVVTIKSTY-PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA----VPRLNLLAAKLMGIFYPNK 155 (276)
T ss_pred HHHHHHHHHHHhhC-CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc----ccHHHHHHHHHHHHhCCCC
Confidence 77777777665432 345899999999999999999999999999999998654211 1111111111111 11111
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.... ........+.........++....................+....+.++++|+++++|++|.++|++.++.+.
T Consensus 156 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 156 IVGK---LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred ccCC---CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH
Confidence 0000 0001111111112222223322222222333333333334556678899999999999999999999999999
Q ss_pred HHhcCCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 274 KRAASKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 274 ~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
+.+. +++++.+++++||.++ +.+ +++.+.+.++
T Consensus 233 ~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 233 QHAN-CNREIKIYEGAKHHLHKETDEVKKSVMKEIETW 269 (276)
T ss_pred HHcc-CCceEEEeCCCcccccCCchhHHHHHHHHHHHH
Confidence 8875 3689999999999999 655 3455555554
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=235.71 Aligned_cols=270 Identities=28% Similarity=0.452 Sum_probs=189.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
.....+...+|..+++..|.|..+ +++++||++||++++.. .|..+++.|.++||+|+++|+||||.|++......++
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~-~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 187 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG-EMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSL 187 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC-CCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCH
Confidence 455667788888999999988654 45789999999988766 5688999999999999999999999998865555577
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
+.+++|+.++++.+.... +..+++++||||||.+++.++. +| ++++++|+.+|....... ............
T Consensus 188 ~~~~~Dl~~~l~~l~~~~-~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~l~~ 262 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSEN-PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAPIFS 262 (395)
T ss_pred HHHHHHHHHHHHHHHHhC-CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHHHHH
Confidence 888999999999998763 4458999999999999998765 55 479999999987543321 111111112222
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
...+.+...... ........++........++.........................+.++++|+|+++|++|.++|++
T Consensus 263 ~~~p~~~~~~~~-~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~ 341 (395)
T PLN02652 263 LVAPRFQFKGAN-KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPL 341 (395)
T ss_pred HhCCCCcccCcc-cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHH
Confidence 233332221111 1111112222222222233333332333334344444434456678899999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc-C-CchhhHHHhhhcC
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI-G-EPEENVELVFGEM 308 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~-~~~~~~~~i~~~i 308 (308)
.++.+++.+.+++++++++++++|.++ + +++++.+.+.++|
T Consensus 342 ~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL 384 (395)
T PLN02652 342 ASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWM 384 (395)
T ss_pred HHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHH
Confidence 999999987655689999999999997 5 7888988888764
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=230.60 Aligned_cols=270 Identities=16% Similarity=0.227 Sum_probs=178.7
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-----c
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-----H 106 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~ 106 (308)
++.++...+|.+++|..+++.. ++++||++||++++.. .|..++..|.++||+|+++|+||||.|+.... .
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~---~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPH---HDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCC---CCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 5567778899999999998753 3678999999988776 45678888888999999999999999975321 2
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..+++++++|+.++++.+.... +..+++++||||||.+++.++.++|++++++|+++|........ ............
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~-~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~~ 184 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPG-PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNWA 184 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHHH
Confidence 2478899999999998875432 34589999999999999999999999999999999876543211 111111111111
Q ss_pred hhhC---CCcccc----cCCCCCCCcccccH----HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 187 AWLV---PTWRVV----PTRGSLPMVSFKEE----WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 187 ~~~~---~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
.... ...... .............. .....+..++.........................+.++++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 1110 000000 00000011111111 112223333322121223333444433333445667889999999
Q ss_pred EeeCCCcccChHHHHHHHHHhcC-----CCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 256 CHGGDDVVCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
++|++|.+++++.++.+++.++. +++++++++|+||.++ |.+ +.+.+.+.++
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~f 325 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDF 325 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHH
Confidence 99999999999999988887732 3568999999999999 665 3455555544
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=227.23 Aligned_cols=266 Identities=28% Similarity=0.422 Sum_probs=206.2
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-CccccCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-GLVAHIP 108 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~ 108 (308)
...+.++...||..++|..|.+..+ ++.+||++||++.+...| ..++..|..+||.|+++|+||||.|. +...+..
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~--~~g~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEP--PKGVVVLVHGLGEHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCC--CCcEEEEecCchHHHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 3456688899999999999987754 348999999999988755 67999999999999999999999998 6666666
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
++.++.+|+.++++.+.... ...+++++||||||.|++.++.+++.+++++|+.+|.......................
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~-~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPD-PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred hHHHHHHHHHHHHHHHhccC-CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 79999999999999998643 66799999999999999999999999999999999987765300011111111222223
Q ss_pred hCCCccccc--CCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH-HhhhhcCCCCcceEEEeeCCCcccC
Q 035721 189 LVPTWRVVP--TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR-DLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 189 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
..+.+.... ..........+++.....+..++..........+......... ........+++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 333333222 1113455667788888999999987777777777776666644 3344467789999999999999999
Q ss_pred -hHHHHHHHHHhcCCCCcEEEecCCcccccCCchh
Q 035721 266 -PACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299 (308)
Q Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 299 (308)
.+...++.+....+++++++++|+.|.++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 244 NVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR 278 (298)
T ss_pred CcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch
Confidence 7999999999888889999999999999944443
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=229.53 Aligned_cols=253 Identities=16% Similarity=0.106 Sum_probs=165.9
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
...+|.+++|..++.++ .+++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.+.. .++++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~plvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGKE---GLTPLLIFNGIGANLE-LVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred eccCCcEEEEEEecCCC---CCCcEEEEeCCCcchH-HHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 35588899997753222 2568999999998887 67889999976 49999999999999986543 3689999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC-CCccc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV-PTWRV 195 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (308)
+.++++.++.+ +++|+||||||.+++.+|.++|++|+++|++++................. ....... .....
T Consensus 81 ~~~~i~~l~~~-----~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (276)
T TIGR02240 81 AARMLDYLDYG-----QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM-ASPRRYIQPSHGI 154 (276)
T ss_pred HHHHHHHhCcC-----ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh-cCchhhhcccccc
Confidence 99999998766 99999999999999999999999999999999876432111100000000 0000000 00000
Q ss_pred ccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 196 VPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.... ......+ .++........... ............... .+....+.++++|+++++|++|++++++..+.+.
T Consensus 155 ~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 155 HIAP-DIYGGAFRRDPELAMAHASKVR---SGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred chhh-hhccceeeccchhhhhhhhhcc---cCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 0000 0000000 01111101000000 000111111111110 1123447889999999999999999999999999
Q ss_pred HHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 274 KRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 274 ~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+ ++++++++++ ||+++ ++|+++++.+.+++
T Consensus 231 ~~~--~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl 263 (276)
T TIGR02240 231 WRI--PNAELHIIDD-GHLFLITRAEAVAPIIMKFL 263 (276)
T ss_pred HhC--CCCEEEEEcC-CCchhhccHHHHHHHHHHHH
Confidence 988 6789999985 99999 99999999988763
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=230.35 Aligned_cols=255 Identities=19% Similarity=0.162 Sum_probs=166.7
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc------ccCCCc
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV------AHIPDL 110 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~ 110 (308)
.+.+|.+++|...+++ .++|||+||+++++. .|+.+.+.|+++ |+|+++|+||||.|+.+. ...+++
T Consensus 13 ~~~~~~~i~y~~~G~~-----~~~vlllHG~~~~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 13 WRWKGYNIRYQRAGTS-----GPALVLVHGFGGNAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred EEEcCeEEEEEEcCCC-----CCeEEEECCCCCChh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 3457889999886532 468999999999887 778999999887 899999999999998653 134689
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
+++++|+.++++.+..+ +++++||||||.+++.+|.++|++|+++|++++....................+....
T Consensus 86 ~~~a~~l~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGD-----PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred HHHHHHHHHHHHHhcCC-----CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 99999999999998776 9999999999999999999999999999999985422111111111111111111000
Q ss_pred CCcc-----cccCC-----CC-----CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcce
Q 035721 191 PTWR-----VVPTR-----GS-----LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPM 253 (308)
Q Consensus 191 ~~~~-----~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~ 253 (308)
.... ..... .. +................. ............+... .......+.++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRP---GLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhc---cCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 0000 00000 00 000000000011111100 0000011111111110 011234577899999
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|+|++|.+++.+.++.+.+.. +++++++++++||+++ ++|+++++.|.+++
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPELVNPLIESFV 291 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 99999999999999888877765 5689999999999999 99999999988764
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=226.14 Aligned_cols=251 Identities=18% Similarity=0.094 Sum_probs=158.7
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVEDAISF 120 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~ 120 (308)
.+++|...+.+ .+|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. ..++++++++|+.++
T Consensus 34 ~~i~y~~~G~~----~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~ 108 (302)
T PRK00870 34 LRMHYVDEGPA----DGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSW 108 (302)
T ss_pred EEEEEEecCCC----CCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 57888776543 2568999999988876 67899999988899999999999999976542 236889999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
+++++.+ +++++||||||.+++.++.++|++|+++|++++.......... .......... ...+.........
T Consensus 109 l~~l~~~-----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~ 181 (302)
T PRK00870 109 FEQLDLT-----DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP-DAFWAWRAFS-QYSPVLPVGRLVN 181 (302)
T ss_pred HHHcCCC-----CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch-HHHhhhhccc-ccCchhhHHHHhh
Confidence 9988765 9999999999999999999999999999999875322110000 0000000000 0000000000000
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH---------HHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHH
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALE---------LLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
......... .....+.................. ...........+.++++|+++|+|++|.+++... +.
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 182 GGTVRDLSD-AVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred ccccccCCH-HHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 000000000 001111000000000000000000 0001122334578899999999999999999766 77
Q ss_pred HHHHhcCCCCc---EEEecCCccccc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKT---LSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~---~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+.++ +++ +.+++++||+++ ++|+++++.+.++|
T Consensus 260 ~~~~~~--~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 260 LQKRIP--GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred HHhhcc--cccccceeeecCCCccchhhChHHHHHHHHHHH
Confidence 888874 444 889999999999 99999999988764
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=223.37 Aligned_cols=256 Identities=13% Similarity=0.081 Sum_probs=163.6
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
.+.+|.+++|..++. +++|||+||++++.. .|+.+++.|.++ ++|+++|+||||.|+.+.. .++.+++++|
T Consensus 12 ~~~~g~~i~y~~~G~------g~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~d 82 (295)
T PRK03592 12 VEVLGSRMAYIETGE------GDPIVFLHGNPTSSY-LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARY 82 (295)
T ss_pred EEECCEEEEEEEeCC------CCEEEEECCCCCCHH-HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHH
Confidence 355888999988762 367999999998876 778999999887 6999999999999987654 3689999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC-CCccc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV-PTWRV 195 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (308)
+.+++++++.+ +++++|||+||.+|+.++.++|++|+++|++++....................+.... .....
T Consensus 83 l~~ll~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 83 LDAWFDALGLD-----DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHHHhCCC-----CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 99999998776 9999999999999999999999999999999984332111000000111111111000 00000
Q ss_pred ccCC---CCCCCc----ccccHHHHHHHhhCCCCCCC-cchHHHH---------HHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 196 VPTR---GSLPMV----SFKEEWKRKLALSSPRRPVA-RPRAATA---------LELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 196 ~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
.... ...... .+.... ...+......... ....... ........+....+.++++|+++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 236 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEE-MAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINA 236 (295)
T ss_pred cchhhHHhhcccCcccccCCHHH-HHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEec
Confidence 0000 000000 011111 1111100000000 0000000 00001112234557889999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.++++....++..... +++++++++++||+++ ++|+++++.+.+++
T Consensus 237 ~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 237 EPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred cCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 9999996655555544432 5789999999999999 99999999988764
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=211.18 Aligned_cols=264 Identities=19% Similarity=0.147 Sum_probs=172.3
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
-+..+.+.+|.+++|..-++++ .|+|+++||++.... .|+.....|+.+||+|+++|+||+|.|+.+.. ..|++
T Consensus 22 ~~hk~~~~~gI~~h~~e~g~~~----gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 22 ISHKFVTYKGIRLHYVEGGPGD----GPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred cceeeEEEccEEEEEEeecCCC----CCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 4456667788888887765544 799999999998766 67999999999999999999999999999877 67899
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc----------h--
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW----------P-- 178 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~----------~-- 178 (308)
..++.|+..++++++.+ +++++||+||+.+|+.+|..+|++|+++|+++...... ...+.. .
T Consensus 97 ~~l~~di~~lld~Lg~~-----k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p-~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK-----KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNP-KLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred HHHHHHHHHHHHHhccc-----eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCc-ccchhhhhccccCccceeE
Confidence 99999999999999987 99999999999999999999999999999998766511 000000 0
Q ss_pred -------hhh-----hHHHhhhhCCCcccc-----cCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH
Q 035721 179 -------LEH-----LLFTVAWLVPTWRVV-----PTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241 (308)
Q Consensus 179 -------~~~-----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
... ....+...+...... +...... .........+.+........-...+.....+.+....
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCc-cchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 000 000000000000000 0000000 0000011111111111100001111222222222111
Q ss_pred hhhhcCCCCcceEEEeeCCCcccChHHHH-HHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 242 LQGRFEEVEVPMLICHGGDDVVCDPACVE-ELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 242 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
....+.++++|+++++|+.|.+.+..... .+.+.++. ..+.++++|+||+++ ++|+++++.++++|
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQEKPQEVNQAILGFI 317 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCcccccccCHHHHHHHHHHHH
Confidence 23446788999999999999999877433 34444421 238899999999999 99999999998764
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=220.02 Aligned_cols=265 Identities=23% Similarity=0.341 Sum_probs=191.6
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-HH------------------------HHHHHHHHHcCCeEE
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-IV------------------------QLTAVLFAKSGFATC 90 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-~~------------------------~~~~~~l~~~g~~v~ 90 (308)
+.+.||.+|++..|.+++ ++.+|+++||++.+... +. ..+++.|.++||.|+
T Consensus 2 ~~~~~g~~l~~~~~~~~~---~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN---AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred ccCCCCCeEEEeeeeccC---CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE
Confidence 456799999999998753 48899999999988762 11 357899999999999
Q ss_pred EecCCCCcCCCCc---cccCCCcchHHHHHHHHHHHHHHh------------------cCC-CCCEEEEEechhhHHHHH
Q 035721 91 AIDHQGHGFSDGL---VAHIPDLNPVVEDAISFFDSFRAR------------------HAP-DLPAFLYSESLGGAIALY 148 (308)
Q Consensus 91 ~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~~~~~------------------~~~-~~~~~l~G~S~Gg~~a~~ 148 (308)
++|+||||.|.+. .....+++++++|+..+++.+... ... ..+++++||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9999999999864 233347889999999999987651 002 568999999999999999
Q ss_pred HHHhcCC--------CccEEEEeCCcCCCCcCCCC-----CchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 149 ITLRQKG--------AWDGLILNGAMCGISQKFKP-----PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 149 ~a~~~p~--------~v~~~vl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++.++++ .++++|+++|.......... ......+...+..+.+...... ......++...+.
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~ 233 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK-----KIRYEKSPYVNDI 233 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC-----ccccccChhhhhH
Confidence 9876542 58999999987643211100 1112223333344444332211 1122344555666
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC--CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEV--EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
+..++.......+..+...+..........+..+ ++|+|+++|++|.+++++.++.+++.+..+++++.++++++|.+
T Consensus 234 ~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i 313 (332)
T TIGR01607 234 IKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVI 313 (332)
T ss_pred HhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCC
Confidence 7777777666667777777777665555556666 79999999999999999999999888765678999999999999
Q ss_pred c-CC-chhhHHHhhhcC
Q 035721 294 I-GE-PEENVELVFGEM 308 (308)
Q Consensus 294 ~-~~-~~~~~~~i~~~i 308 (308)
+ +. ++++.+.+.++|
T Consensus 314 ~~E~~~~~v~~~i~~wL 330 (332)
T TIGR01607 314 TIEPGNEEVLKKIIEWI 330 (332)
T ss_pred ccCCCHHHHHHHHHHHh
Confidence 9 53 577878777764
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=231.24 Aligned_cols=259 Identities=18% Similarity=0.160 Sum_probs=163.8
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH-HHHHHH---HcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL-TAVLFA---KSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
+.+.+|.+++|...+|.++ +.+++|||+||++++.. +|.. +.+.|. +++|+|+++|+||||.|+.+....++++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDN-KAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eEeeCCeEEEEEEecCCCC-CCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 3345668999999888764 44689999999998877 5553 445555 3689999999999999987654456888
Q ss_pred hHHHHHH-HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 112 PVVEDAI-SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 112 ~~~~d~~-~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
++++++. .+++.++.. +++++||||||.+++.++.++|++|+++|++++......... ............ .
T Consensus 258 ~~a~~l~~~ll~~lg~~-----k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~--~~~~~~~~~~~~-~ 329 (481)
T PLN03087 258 EHLEMIERSVLERYKVK-----SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGV--QATQYVMRKVAP-R 329 (481)
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccch--hHHHHHHHHhcc-c
Confidence 8888884 777777655 999999999999999999999999999999998544321110 000000000000 0
Q ss_pred CCcccccCCCCCCCc------------ccccHHHHHH----HhhCCC---------CCCCcchHHHHHHHHHH----H-H
Q 035721 191 PTWRVVPTRGSLPMV------------SFKEEWKRKL----ALSSPR---------RPVARPRAATALELLRV----S-R 240 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~~~----~-~ 240 (308)
..+...... ..... .......... ...... .............+... . .
T Consensus 330 ~~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 330 RVWPPIAFG-ASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDG 408 (481)
T ss_pred ccCCccccc-hhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhh
Confidence 000000000 00000 0000000000 000000 00000000011001100 0 1
Q ss_pred HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 241 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
.......++++|+++++|++|.++|++..+.+++.+ +++++++++++||+++ ++|+++++.+.++
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 112233468999999999999999999999999999 7899999999999977 7899999988765
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=226.71 Aligned_cols=257 Identities=16% Similarity=0.199 Sum_probs=161.6
Q ss_pred CCc-EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 40 RGL-RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 40 ~g~-~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
+|. +++|...++.+..+..|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 455 999988776422224578999999998876 67888999976 699999999999999876544568899999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH-hcCCCccEEEEeCCcCCCCcCCCC-Cchhhh---hHHHhhhhCCC-
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITL-RQKGAWDGLILNGAMCGISQKFKP-PWPLEH---LLFTVAWLVPT- 192 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~- 192 (308)
++++.+..+ +++++||||||.+++.++. .+|++|+++|++++.......... ...... ...........
T Consensus 147 ~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 147 DFLEEVVQK-----PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHhcCC-----CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999988766 9999999999999998887 479999999999986433211100 000000 00000000000
Q ss_pred -cc---cccC--C--------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEE
Q 035721 193 -WR---VVPT--R--------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 193 -~~---~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i 256 (308)
.. .... . ..+................ . ................ ..+....+.++++|+|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG-P--ADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh-h--ccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 00 0000 0 0000000000111111100 0 0000111111111110 011234567899999999
Q ss_pred eeCCCcccChHH-----HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 257 HGGDDVVCDPAC-----VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 257 ~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++|.++|++. .+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 999999998763 23344445 6799999999999999 99999999988764
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=220.33 Aligned_cols=233 Identities=13% Similarity=0.110 Sum_probs=152.4
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
+|||+||++.+.. .|+.+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+... .+++++||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD----HKVILVGH 79 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC----CCEEEEec
Confidence 5999999998776 778999999888899999999999999865444468899999999999987541 29999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc--ccC-CCCCCCcccccHHHHHHH
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV--VPT-RGSLPMVSFKEEWKRKLA 216 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~ 216 (308)
||||.+++.++.++|++|+++|++++......... ..............+.. ... ..................
T Consensus 80 SmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 80 SIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII----SPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred CcchHHHHHHHHhCchheeEEEEEccccCCCCCCc----cHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 99999999999999999999999998532111100 00000000000000000 000 000000000000000000
Q ss_pred hhCCC--------CCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 217 LSSPR--------RPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 217 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
..... ........... ....+....+..+++|+++++|++|.++|++..+.+.+.+ ++++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~ 229 (255)
T PLN02965 156 YNQSPLEDYTLSSKLLRPAPVRAF----QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLED 229 (255)
T ss_pred hcCCCHHHHHHHHHhcCCCCCcch----hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecC
Confidence 00000 00000000000 0001222345578999999999999999999999999998 6789999999
Q ss_pred Cccccc-CCchhhHHHhhhc
Q 035721 289 MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~ 307 (308)
+||+++ ++|+++++.|.++
T Consensus 230 ~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 230 SDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred CCCchhhcCHHHHHHHHHHH
Confidence 999999 9999999988765
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=215.89 Aligned_cols=248 Identities=14% Similarity=0.130 Sum_probs=161.2
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
++.|...++.+. ..+|+|||+||++++.. .|..++..|.+ +|+|+++|+||||.|..... ++++++++|+.++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 2 KLNIRAQTAQNP-HNNSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLD 76 (255)
T ss_pred cceeeeccCCCC-CCCCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHH
Confidence 355666555433 56899999999998877 66888999976 59999999999999987544 588999999999999
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC--C
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR--G 200 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 200 (308)
.+..+ +++++||||||.+++.++.++|++|+++|++++.+..... .. ............... ..... .
T Consensus 77 ~l~~~-----~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~-~~~~~~~~~~~~~~~-~~~~~~~~ 146 (255)
T PRK10673 77 ALQIE-----KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RR-HDEIFAAINAVSEAG-ATTRQQAA 146 (255)
T ss_pred HcCCC-----ceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hh-hHHHHHHHHHhhhcc-cccHHHHH
Confidence 88665 8999999999999999999999999999999764322110 00 001111111000000 00000 0
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCC
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKD 280 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 280 (308)
...................................... ....+.++++++|+++|+|++|..++.+..+.+.+.+ ++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~ 223 (255)
T PRK10673 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQ 223 (255)
T ss_pred HHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CC
Confidence 00000000111111111111000000011111111111 1112346778999999999999999999999998888 68
Q ss_pred CcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 281 KTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 281 ~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++.+++++||+++ ++|+++++.+.++|
T Consensus 224 ~~~~~~~~~gH~~~~~~p~~~~~~l~~fl 252 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPDAVLRAIRRYL 252 (255)
T ss_pred cEEEEeCCCCCeeeccCHHHHHHHHHHHH
Confidence 99999999999999 99999999988764
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=214.96 Aligned_cols=257 Identities=16% Similarity=0.126 Sum_probs=166.7
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+.+.+|.+++|...++.+ .++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.+....+++++++
T Consensus 9 ~~~~~~~~~~~~~~~g~~~----~~~vv~~hG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTA----GPLLLLLHGTGASTH-SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred ceeeECCEEEEEEecCCCC----CCeEEEEcCCCCCHH-HHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHH
Confidence 3446688899998765432 578999999998877 66888999976 59999999999999987665456899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh--hhCCC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA--WLVPT 192 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 192 (308)
+|+.++++.+..+ +++++||||||.+++.++.++|++++++|++++........... .......... .....
T Consensus 83 ~~l~~~i~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 83 EDLSALCAAEGLS-----PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGT-LFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHHHHHHHcCCC-----CceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccc-ccchhhHhhhhcccchH
Confidence 9999999877655 89999999999999999999999999999998754322111100 0000000000 00000
Q ss_pred cccc-cCCCCCCCcccc------cHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 193 WRVV-PTRGSLPMVSFK------EEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 193 ~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
.... ............ +......+.... ............... .......++++++|+++++|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLI---RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHhh---cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 0000 000000000000 000000000000 000000001111100 0112345678899999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++..+.+.+.+ ++++++.++++||+++ ++|+++++.|.+++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 9999999998887 6789999999999999 99999999998764
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=214.47 Aligned_cols=242 Identities=19% Similarity=0.159 Sum_probs=149.7
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+|. + .|+|||+||+++++. .|+.+.+.|.++ |+|+++|+||||.|.... .++++++++++.+
T Consensus 4 ~~y~~~G~--g---~~~ivllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~---- 70 (256)
T PRK10349 4 IWWQTKGQ--G---NVHLVLLHGWGLNAE-VWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ---- 70 (256)
T ss_pred cchhhcCC--C---CCeEEEECCCCCChh-HHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----
Confidence 55665542 1 346999999998887 778999999765 999999999999997543 2456555555442
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh-hhhCCCcc--c-ccC-
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV-AWLVPTWR--V-VPT- 198 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~~~- 198 (308)
+.. ++++++||||||.+++.+|.++|++|+++|++++..................... ........ . ...
T Consensus 71 ~~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 71 QAP-----DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred cCC-----CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 222 3999999999999999999999999999999988544321111011100111000 00000000 0 000
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPV-ARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
.......... ............... ............. ..+..+.+.++++|+++++|++|.++|.+.++.+.+.+
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i- 222 (256)
T PRK10349 146 LQTMGTETAR-QDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW- 222 (256)
T ss_pred HHHccCchHH-HHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-
Confidence 0000000000 000000000000000 0001111111111 12445667889999999999999999999988888888
Q ss_pred CCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 278 SKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 278 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+++++++++++||+++ ++|+++++.+.++
T Consensus 223 -~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~ 252 (256)
T PRK10349 223 -PHSESYIFAKAAHAPFISHPAEFCHLLVAL 252 (256)
T ss_pred -CCCeEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 6899999999999999 9999999988764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=216.18 Aligned_cols=255 Identities=13% Similarity=0.098 Sum_probs=159.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
+++...++ ..+|.+++|...+. +++|||+||++.+.. .|+.+.+.|.+ +|+|+++|+||||.|+.+....+
T Consensus 12 ~~~~~~~~-~~~~~~i~y~~~G~------~~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 12 YPFESRWF-DSSRGRIHYIDEGT------GPPILLCHGNPTWSF-LYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred ccccceEE-EcCCcEEEEEECCC------CCEEEEECCCCccHH-HHHHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc
Confidence 33444455 45777999987652 467999999987655 67888899876 59999999999999987654446
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh-
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA- 187 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (308)
+.+++++++.++++++... +++++||||||.+++.++..+|++|+++|++++....... ...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-----~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~ 153 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLD-----RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT----LAMKAFSRVMSS 153 (286)
T ss_pred CHHHHHHHHHHHHHHhCCC-----CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc----hhHHHHHHHhcc
Confidence 7888899999998887655 8999999999999999999999999999998775321100 00000000000
Q ss_pred -----hhCCCccc-ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH-H---H-HH---HHHhhhhcCC--CCc
Q 035721 188 -----WLVPTWRV-VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE-L---L-RV---SRDLQGRFEE--VEV 251 (308)
Q Consensus 188 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~---~~~~~~~~~~--i~~ 251 (308)
........ ............ .......+. . ............ . . .. ..+....+.+ +++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T PRK03204 154 PPVQYAILRRNFFVERLIPAGTEHRP-SSAVMAHYR-A---VQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTK 228 (286)
T ss_pred ccchhhhhhhhHHHHHhccccccCCC-CHHHHHHhc-C---CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCC
Confidence 00000000 000000000000 000111110 0 000001111000 0 0 00 0111111111 289
Q ss_pred ceEEEeeCCCcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 252 PMLICHGGDDVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|+++|+|++|.++++. ..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 229 PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 229 PTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9999999999988655 467788888 6899999999999999 99999999998774
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=212.80 Aligned_cols=251 Identities=16% Similarity=0.181 Sum_probs=161.9
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+++.. ..+|+|||+||++++.. +|..+++.|.+ +|+|+++|+||||.|.......++++++++++.++++.
T Consensus 1 ~~~~~~~~~~--~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 1 MHYELHGPPD--ADAPVVVLSSGLGGSGS-YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CEEEEecCCC--CCCCEEEEEcCCCcchh-HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 3567776533 34789999999998887 66788888865 69999999999999987655556889999999999988
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCC
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLP 203 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (308)
++.. +++++||||||.+++.++.++|++++++|++++......... .........+.................
T Consensus 77 ~~~~-----~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 77 LNIE-----RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--RCFDVRIALLQHAGPEAYVHAQALFLY 149 (257)
T ss_pred hCCC-----cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH--HHHHHHHHHHhccCcchhhhhhhhhhc
Confidence 7665 899999999999999999999999999999987544321100 000000001100000000000000000
Q ss_pred Cccccc---HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCC
Q 035721 204 MVSFKE---EWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKD 280 (308)
Q Consensus 204 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 280 (308)
...+.. ............................ ..+....+.++++|+++++|++|.++|++.++.+.+.+ ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~ 226 (257)
T TIGR03611 150 PADWISENAARLAADEAHALAHFPGKANVLRRINALE-AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PN 226 (257)
T ss_pred cccHhhccchhhhhhhhhcccccCccHHHHHHHHHHH-cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--CC
Confidence 000000 0000000000000000001100000000 12233557788999999999999999999999999888 67
Q ss_pred CcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 281 KTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 281 ~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++.++++||+++ ++|+++++.+.++|
T Consensus 227 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 255 (257)
T TIGR03611 227 AQLKLLPYGGHASNVTDPETFNRALLDFL 255 (257)
T ss_pred ceEEEECCCCCCccccCHHHHHHHHHHHh
Confidence 89999999999999 99999999988764
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=215.05 Aligned_cols=266 Identities=15% Similarity=0.105 Sum_probs=169.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc--
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-- 105 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 105 (308)
++++........+|.+++|...++.+ +++|||+||++++.. .|+.+++.|.+ +|+|+++|+||||.|+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~~----~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~ 174 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSNN----NPPVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY 174 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCCC----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccc
Confidence 44445555667889999998876532 578999999998876 67889999976 69999999999999987643
Q ss_pred -cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 106 -HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 106 -~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
..++++++++++.++++.+..+ +++++|||+||.+++.++.++|++|+++|++++.........+ .....+..
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l~~~-----~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~~~~ 248 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDELKSD-----KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSEFSN 248 (383)
T ss_pred cccCCHHHHHHHHHHHHHHhCCC-----CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-HHHHHHHH
Confidence 2468999999999999998876 9999999999999999999999999999999986432110001 00100000
Q ss_pred H-hhhhCCCcccccCCCCCC--CcccccHHHHHHHhhCCCCCCC-cchHHHHHHHHHH-----HHHhhhhc--CCCCcce
Q 035721 185 T-VAWLVPTWRVVPTRGSLP--MVSFKEEWKRKLALSSPRRPVA-RPRAATALELLRV-----SRDLQGRF--EEVEVPM 253 (308)
Q Consensus 185 ~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~--~~i~~P~ 253 (308)
. ................+. ............+......... ............. ..+....+ .++++|+
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPv 328 (383)
T PLN03084 249 FLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPI 328 (383)
T ss_pred HHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCE
Confidence 0 000000000000000000 0000001111111111000000 0001111111100 00111111 3679999
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++|++|.+++.+.++.+++.. +.++.+++++||+++ ++|+++++.|.+++
T Consensus 329 LiI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl 381 (383)
T PLN03084 329 TVCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCGEELGGIISGIL 381 (383)
T ss_pred EEEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCHHHHHHHHHHHh
Confidence 99999999999998888887763 689999999999999 99999999998764
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=215.60 Aligned_cols=254 Identities=17% Similarity=0.160 Sum_probs=164.6
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+.+.+|.+++|...++ +++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+++... ++.+.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~------g~~vvliHG~~~~~~-~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a 139 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE------GLPIVLIHGFGASAF-HWRYNIPELAK-KYKVYALDLLGFGWSDKALIE-YDAMVWR 139 (354)
T ss_pred eEEEECCEEEEEEEcCC------CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCcccc-cCHHHHH
Confidence 33355688899877542 356999999998866 67888888976 599999999999999876543 6888889
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC--------chhhh-hHHH
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP--------WPLEH-LLFT 185 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--------~~~~~-~~~~ 185 (308)
+++.++++.+..+ +++++|||+||.+++.+|.++|++|+++|++++........... ..... ....
T Consensus 140 ~~l~~~i~~~~~~-----~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 140 DQVADFVKEVVKE-----PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHHhccC-----CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 9999999988766 99999999999999999999999999999998764432211100 00000 0000
Q ss_pred h----hhhCCCcccccCC----------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH------HHHhhhh
Q 035721 186 V----AWLVPTWRVVPTR----------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV------SRDLQGR 245 (308)
Q Consensus 186 ~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 245 (308)
. ............. ..+......+........... ............... ..+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPA---ADPNAGEVYYRLMSRFLFNQSRYTLDSL 291 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcc---cCCchHHHHHHHHHHHhcCCCCCCHHHH
Confidence 0 0000000000000 000000000011111110000 000111111111111 0123345
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++|+|++|.+++.+.++.+.+.+ ++.+++++ ++||+++ ++|+++++.|.+++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHHHHHHHHHHH
Confidence 7889999999999999999999999999888 67899999 5999999 99999999998864
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=212.69 Aligned_cols=250 Identities=19% Similarity=0.116 Sum_probs=152.9
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHH---HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ---LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
|.+++|...+ ..|+|||+||++++.. .|. .....|.+.||+|+++|+||||.|+............++|+
T Consensus 19 ~~~~~y~~~g------~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 91 (282)
T TIGR03343 19 NFRIHYNEAG------NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91 (282)
T ss_pred ceeEEEEecC------CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHH
Confidence 4567777543 1467999999987765 333 23455667789999999999999986532211222467889
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc--
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV-- 195 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 195 (308)
.++++.+..+ +++++||||||.+++.++.++|++++++|++++.......... ...... ............
T Consensus 92 ~~~l~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 164 (282)
T TIGR03343 92 KGLMDALDIE-----KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAP-MPMEGI-KLLFKLYAEPSYET 164 (282)
T ss_pred HHHHHHcCCC-----CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccccc-CchHHH-HHHHHHhcCCCHHH
Confidence 9998888766 9999999999999999999999999999999875321110000 000000 000000000000
Q ss_pred --ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH----HHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 196 --VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL----RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
........................... ............ ....+....++++++|+++++|++|.+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 165 LKQMLNVFLFDQSLITEELLQGRWENIQR--QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHhhCccCcccCcHHHHHhHHHHhhc--CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 000000000000000000000000000 000000000000 001223345778999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 270 EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+++.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 243 ~~~~~~~--~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 243 LKLLWNM--PDAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred HHHHHhC--CCCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 9999988 6899999999999999 99999999988764
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=215.68 Aligned_cols=258 Identities=18% Similarity=0.157 Sum_probs=157.3
Q ss_pred cCCCcEEEEEEecCCCC---CCCcceEEEEccCCCccchHH-HHHHHHH-------HHcCCeEEEecCCCCcCCCCcccc
Q 035721 38 NSRGLRLFTQWWTPLPP---AKTLGVLCVVHGFTGESSWIV-QLTAVLF-------AKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~-~~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
+.+|.+++|..+++.+. .+..|+|||+||++++...|+ ..+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 46788999998875320 011578999999998876343 2455444 135699999999999999865331
Q ss_pred ------CCCcchHHHHHHHHH-HHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 107 ------IPDLNPVVEDAISFF-DSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 107 ------~~~~~~~~~d~~~~l-~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
.++++++++++.+++ ++++.+ +++ ++||||||.+|+.++.++|++|+++|++++....... ....
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~-----~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~--~~~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK-----HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG--RNWM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC-----ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH--HHHH
Confidence 357788888887754 666655 775 8999999999999999999999999999875321110 0000
Q ss_pred hhhh-HHHhhhhCCCcccccCCCCCCCccc----------------------ccHH-HHHHHhhCCCCCCCcchHHHHHH
Q 035721 179 LEHL-LFTVAWLVPTWRVVPTRGSLPMVSF----------------------KEEW-KRKLALSSPRRPVARPRAATALE 234 (308)
Q Consensus 179 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
.... ....... ..+.... . ....... .... ............. .........
T Consensus 199 ~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 274 (360)
T PRK06489 199 WRRMLIESIRND-PAWNNGN-Y-TTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV-TADANDFLY 274 (360)
T ss_pred HHHHHHHHHHhC-CCCCCCC-C-CCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh-hcCHHHHHH
Confidence 0000 0001000 0000000 0 0000000 0000 0000000000000 000111111
Q ss_pred HHHH--HHHhhhhcCCCCcceEEEeeCCCcccChHHH--HHHHHHhcCCCCcEEEecCC----cccccCCchhhHHHhhh
Q 035721 235 LLRV--SRDLQGRFEEVEVPMLICHGGDDVVCDPACV--EELYKRAASKDKTLSIYPGM----WHQLIGEPEENVELVFG 306 (308)
Q Consensus 235 ~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~i~~ 306 (308)
.... ..+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ +++++++++++ ||.++++|+++++.|.+
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~e~P~~~~~~i~~ 352 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTTGSAKFWKAYLAE 352 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccccCHHHHHHHHHH
Confidence 1111 1234556889999999999999999998875 7788888 68999999996 99988999999998887
Q ss_pred cC
Q 035721 307 EM 308 (308)
Q Consensus 307 ~i 308 (308)
++
T Consensus 353 FL 354 (360)
T PRK06489 353 FL 354 (360)
T ss_pred HH
Confidence 64
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-31 Score=207.72 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=159.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCCcchHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVV 114 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 114 (308)
.+.+|..+.|...++.+ .+++|||+||++++...+|..+...+.+.||+|+++|+||+|.|..+... .+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 7 ITVDGGYHLFTKTGGEG---EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred ecCCCCeEEEEeccCCC---CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 45566677787765432 26789999998776665777777777766999999999999999865433 25788999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc-
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW- 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 193 (308)
+|+.++++.++.+ +++++|||+||.+++.++.++|++++++|++++....... ..........+....
T Consensus 84 ~~~~~~~~~~~~~-----~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~ 152 (288)
T TIGR01250 84 DELEEVREKLGLD-----KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEY------VKELNRLRKELPPEVR 152 (288)
T ss_pred HHHHHHHHHcCCC-----cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHH------HHHHHHHHhhcChhHH
Confidence 9999998887665 8999999999999999999999999999999875432110 000000000000000
Q ss_pred ---ccccCCCCCCCcccccHHHHHHHhhCCCC-CCCcchHHHH--------HHH-----------HHHHHHhhhhcCCCC
Q 035721 194 ---RVVPTRGSLPMVSFKEEWKRKLALSSPRR-PVARPRAATA--------LEL-----------LRVSRDLQGRFEEVE 250 (308)
Q Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~i~ 250 (308)
........+....... ............ .......... ... .....+....+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 231 (288)
T TIGR01250 153 AAIKRCEASGDYDNPEYQE-AVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIK 231 (288)
T ss_pred HHHHHHHhccCcchHHHHH-HHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccC
Confidence 0000000000000000 000000000000 0000000000 000 000012334567889
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++++|++|.+ +++..+.+.+.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 232 ~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 232 VPTLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred CCEEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 9999999999985 667888888877 6789999999999999 99999999998764
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=184.13 Aligned_cols=224 Identities=19% Similarity=0.186 Sum_probs=167.8
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+.+|+|+||+.|+.. ..+.+.+.|.++||.|+++.+||||......-. .+.++|.+|+.+..+++... ....|.++
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~--gy~eI~v~ 90 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEA--GYDEIAVV 90 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHc--CCCeEEEE
Confidence 467999999999998 558999999999999999999999987643333 48899999999999999976 77899999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH-HHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE-WKRKLA 216 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 216 (308)
|.||||.+++.+|..+| ++++|.++++....... .....++.+.... .+..-.+. .....+
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~---~iie~~l~y~~~~-------------kk~e~k~~e~~~~e~ 152 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR---IIIEGLLEYFRNA-------------KKYEGKDQEQIDKEM 152 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCcccccch---hhhHHHHHHHHHh-------------hhccCCCHHHHHHHH
Confidence 99999999999999998 89999999876643221 1122222222110 00000111 111111
Q ss_pred hhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc--
Q 035721 217 LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-- 294 (308)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-- 294 (308)
... ..........+.....+....+..|..|+++++|++|+.+|.+.+..+++.+...+.++.+++++||.+.
T Consensus 153 ~~~-----~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D 227 (243)
T COG1647 153 KSY-----KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLD 227 (243)
T ss_pred HHh-----hcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecc
Confidence 111 1112334445555556777888999999999999999999999999999999877899999999999998
Q ss_pred CCchhhHHHhhhcC
Q 035721 295 GEPEENVELVFGEM 308 (308)
Q Consensus 295 ~~~~~~~~~i~~~i 308 (308)
.+.+.+.+.|+.++
T Consensus 228 ~Erd~v~e~V~~FL 241 (243)
T COG1647 228 KERDQVEEDVITFL 241 (243)
T ss_pred hhHHHHHHHHHHHh
Confidence 67788888887764
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=193.22 Aligned_cols=271 Identities=20% Similarity=0.178 Sum_probs=160.9
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
...+++...+....++..+......+.. ..+.++|++||+|.+...|+ .-.+.|++ .++|+++|++|+|.|+.+.-
T Consensus 60 ~~~v~~~~~~v~i~~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~-~Nf~~La~-~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 60 SVPVPYSKKYVRIPNGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFF-RNFDDLAK-IRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred hcCCCcceeeeecCCCceeEEEeecccc--cCCCcEEEEeccchhHHHHH-Hhhhhhhh-cCceEEecccCCCCCCCCCC
Confidence 3456666777777777776665555443 45889999999999888454 44567777 59999999999999988653
Q ss_pred cCC---CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC-C------CC
Q 035721 106 HIP---DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK-F------KP 175 (308)
Q Consensus 106 ~~~---~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~------~~ 175 (308)
... ....+++-++++.... +-++.+|+|||+||++|..||.+||++|+.|||++|....... . .+
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~-----~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKM-----GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHc-----CCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 311 1223334444443333 4449999999999999999999999999999999998654432 1 11
Q ss_pred CchhhhhHHHhhhhCCCcccccCCCCCCCcccc---cHH--------HHHH-HhhCCCCCCCcchHHHHHHHHH-----H
Q 035721 176 PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK---EEW--------KRKL-ALSSPRRPVARPRAATALELLR-----V 238 (308)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~ 238 (308)
..+..........+.+........ .+...... ... ..+. ...-.......++.......+. +
T Consensus 211 ~~w~~~~~~~~~~~nPl~~LR~~G-p~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~A 289 (365)
T KOG4409|consen 211 PEWYKALFLVATNFNPLALLRLMG-PLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWA 289 (365)
T ss_pred hHHHhhhhhhhhcCCHHHHHHhcc-ccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchh
Confidence 111111111111111100000000 00000000 000 0000 0000011122222222222111 1
Q ss_pred HHHhhhhcCCCC--cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 239 SRDLQGRFEEVE--VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 239 ~~~~~~~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
...+.+.+..++ ||+++|+|++|.+ +.....++...+....++.++++++||.++ ++|+.|++.|.+.
T Consensus 290 r~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~ 360 (365)
T KOG4409|consen 290 RRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEE 360 (365)
T ss_pred hhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHH
Confidence 234455555554 9999999999965 455555555554445699999999999999 9999999998764
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=211.26 Aligned_cols=258 Identities=10% Similarity=0.018 Sum_probs=153.7
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH---HHHHHcCCeEEEecCCCCcCCCCccc--cCCCcch
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA---VLFAKSGFATCAIDHQGHGFSDGLVA--HIPDLNP 112 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~ 112 (308)
+.+|.+++|..+++... ...|+||++||++++.. +|..+. +.|..++|+|+++|+||||.|+.+.. ..++++.
T Consensus 22 ~~~~~~l~y~~~G~~~~-~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 99 (339)
T PRK07581 22 TLPDARLAYKTYGTLNA-AKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAAR 99 (339)
T ss_pred CcCCceEEEEecCccCC-CCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCC
Confidence 45688999999886421 12467777788776655 444332 35655679999999999999986532 1234443
Q ss_pred -----HHHHHHH----HHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhh
Q 035721 113 -----VVEDAIS----FFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182 (308)
Q Consensus 113 -----~~~d~~~----~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 182 (308)
+++|+.+ ++++++.. + ++|+||||||++|+.+|.++|++|+++|++++........ .......
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~lgi~-----~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~--~~~~~~~ 172 (339)
T PRK07581 100 FPHVTIYDNVRAQHRLLTEKFGIE-----RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHN--FVFLEGL 172 (339)
T ss_pred CCceeHHHHHHHHHHHHHHHhCCC-----ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHH--HHHHHHH
Confidence 5677765 55566665 8 5799999999999999999999999999998754321100 0000000
Q ss_pred HHHhhhhCCCccccc--------------------------CCCCCCCccccc-HHHHHHHhhCCCCCCCcchHHHHHHH
Q 035721 183 LFTVAWLVPTWRVVP--------------------------TRGSLPMVSFKE-EWKRKLALSSPRRPVARPRAATALEL 235 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
...+.. .+.+.... ............ ..........................
T Consensus 173 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (339)
T PRK07581 173 KAALTA-DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWT 251 (339)
T ss_pred HHHHHh-CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHH
Confidence 000000 00000000 000000000000 00000000000000000111111100
Q ss_pred HH------H---HHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC-Cccccc-CCchhhHHHh
Q 035721 236 LR------V---SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG-MWHQLI-GEPEENVELV 304 (308)
Q Consensus 236 ~~------~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~i 304 (308)
.. . ..+....++++++|+|+|+|++|..+|++.++.+.+.+ ++++++++++ +||..+ ++++.+...|
T Consensus 252 ~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 252 WQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred hhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHHHHHHH
Confidence 00 0 01344567889999999999999999999999999888 6799999999 999999 9999999888
Q ss_pred hhc
Q 035721 305 FGE 307 (308)
Q Consensus 305 ~~~ 307 (308)
.++
T Consensus 330 ~~~ 332 (339)
T PRK07581 330 DAA 332 (339)
T ss_pred HHH
Confidence 765
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=205.56 Aligned_cols=243 Identities=18% Similarity=0.195 Sum_probs=157.2
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+++.+ .+|+||++||++.+.. .|..+++.|. .||+|+++|+||||.|+.... .++++++++|+.++++.
T Consensus 2 ~~~~~~g~~~---~~~~li~~hg~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 2 LHYRLDGAAD---GAPVLVFINSLGTDLR-MWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDH 75 (251)
T ss_pred ceEEeecCCC---CCCeEEEEcCcccchh-hHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 5666665432 3789999999988877 6688888886 579999999999999976543 35888999999999988
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh-----hHHHhhhhCCCcccccC
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH-----LLFTVAWLVPTWRVVPT 198 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 198 (308)
+..+ +++++|||+||.+++.+|.++|++++++|++++................ ...........+. .
T Consensus 76 ~~~~-----~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 147 (251)
T TIGR02427 76 LGIE-----RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWF-T-- 147 (251)
T ss_pred hCCC-----ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHc-c--
Confidence 7655 8999999999999999999999999999999875432211000000000 0000000000000 0
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS 278 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 278 (308)
. .+.. ........+...... .............. ..+....+.++++|+++++|++|.+++.+..+.+.+.+
T Consensus 148 ~-~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-- 219 (251)
T TIGR02427 148 P-GFRE---AHPARLDLYRNMLVR-QPPDGYAGCCAAIR-DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-- 219 (251)
T ss_pred c-cccc---CChHHHHHHHHHHHh-cCHHHHHHHHHHHh-cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--
Confidence 0 0000 000000000000000 00000000000010 12233556788999999999999999999999888888
Q ss_pred CCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 279 KDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++.++++++++||+++ ++|+++.+.+.+++
T Consensus 220 ~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred CCceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 5789999999999999 99999998887764
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=212.37 Aligned_cols=260 Identities=15% Similarity=0.105 Sum_probs=160.2
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch----------HHHHHH---HHHHHcCCeEEEecCCC--CcCCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW----------IVQLTA---VLFAKSGFATCAIDHQG--HGFSDG 102 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~ 102 (308)
..+|.+|+|..+++.+. ..+++|||+||++++... +|+.++ ..|..++|+|+++|+|| ||.|..
T Consensus 12 ~~~~~~~~y~~~g~~~~-~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNA-ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred ccCCceEEEEeccccCC-CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 45788999999987432 235789999999987632 467665 25555679999999999 565543
Q ss_pred c----cc-------cCCCcchHHHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 103 L----VA-------HIPDLNPVVEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 103 ~----~~-------~~~~~~~~~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
. .. ..++++++++|+.++++.++.. + ++++||||||.+++.++.++|++|+++|++++.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-----QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-----CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCC
Confidence 1 11 1357889999999999988766 7 9999999999999999999999999999999865432
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCC-CCCccc-----------cc-HHHHHHHhhCCCC---------------
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS-LPMVSF-----------KE-EWKRKLALSSPRR--------------- 222 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~-~~~~~~~~~~~~~--------------- 222 (308)
.... .........+... ..+........ ...... .. .............
T Consensus 166 ~~~~--~~~~~~~~~~~~~-~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 166 AWCI--AFNEVQRQAILAD-PNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred HHHH--HHHHHHHHHHHhC-CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 1100 0000000000000 00000000000 000000 00 0000000000000
Q ss_pred ------------CCCcchHHHHHHHHHHH------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEE
Q 035721 223 ------------PVARPRAATALELLRVS------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLS 284 (308)
Q Consensus 223 ------------~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 284 (308)
................. .+..+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++++++
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCc
Confidence 00000000000111110 1124667889999999999999999999999999999 455554
Q ss_pred -----EecCCccccc-CCchhhHHHhhhcC
Q 035721 285 -----IYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 285 -----~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++||.++ ++|+++++.|.+++
T Consensus 321 v~~~~i~~~~GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred eEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 5678999999 99999999998764
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=200.58 Aligned_cols=232 Identities=20% Similarity=0.174 Sum_probs=146.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+|||+||++++.. .|..+.+.|.+ +|+|+++|+||+|.|..... ++++++++++.+.+ ..+++++
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~---------~~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA---------PDPAIWL 70 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC---------CCCeEEE
Confidence 478999999998887 67889999975 59999999999999876432 35555555554432 2399999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC-chhhhhHH-HhhhhCCCcc-----cccCCCCCCCcccccH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP-WPLEHLLF-TVAWLVPTWR-----VVPTRGSLPMVSFKEE 210 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 210 (308)
||||||.+++.++.++|++++++|++++........... ........ .......... ..... .+... ....
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~ 148 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ-TLGTP-TARQ 148 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH-HhcCC-ccch
Confidence 999999999999999999999999998865432211100 00000010 0000000000 00000 00000 0000
Q ss_pred HHHHHHhhCCCCCCCc--chHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 211 WKRKLALSSPRRPVAR--PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
.... ........... ............ .+....+.++++|+++++|++|.+++++..+.+.+.+ ++++++++++
T Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 224 (245)
T TIGR01738 149 DARA-LKQTLLARPTPNVQVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAK 224 (245)
T ss_pred HHHH-HHHHhhccCCCCHHHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCC
Confidence 0000 00000000000 111111111111 2334567889999999999999999999999888888 6899999999
Q ss_pred Cccccc-CCchhhHHHhhhcC
Q 035721 289 MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~i 308 (308)
+||+++ ++|+++++.|.++|
T Consensus 225 ~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 225 AAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCccccCHHHHHHHHHhhC
Confidence 999999 99999999999876
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=187.90 Aligned_cols=237 Identities=14% Similarity=0.108 Sum_probs=161.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIP 108 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~ 108 (308)
..+..+.+.||.+|+.++..|++. ..+.++||++||++++.. .+..+++.|+++||.|+.+|+||+ |.|++.... .
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~ 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-F 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-C
Confidence 455678889999999988888632 246789999999999765 467999999999999999999987 999775443 2
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+......|+.+++++++.. +..++.|+||||||.+|+..|... +++++|+.+|......... . .+..
T Consensus 87 t~s~g~~Dl~aaid~lk~~--~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~------~---~~~~ 153 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR--GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLE------R---ALGY 153 (307)
T ss_pred cccccHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHH------H---hhhc
Confidence 5555689999999999876 567899999999999997777643 3999999999766431110 0 0000
Q ss_pred hCCCcccccCCC--CCCCcccc-cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 189 LVPTWRVVPTRG--SLPMVSFK-EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 189 ~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
....+....... .+...... ..........+.. ......+.++++++|+|+|||++|.+||
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~----------------~~~s~i~~~~~l~~PvLiIHG~~D~lVp 217 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWD----------------TLDSTINKMKGLDIPFIAFTANNDSWVK 217 (307)
T ss_pred ccccCcccccccccccccccccHHHHHHHHHhcCcc----------------ccccHHHHHhhcCCCEEEEEcCCCCccC
Confidence 000000000000 00000000 0000000000000 0011224456778999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCcccccCCch
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 298 (308)
++.++.+++.+++.++++++++|++|.+.+++-
T Consensus 218 ~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~~~ 250 (307)
T PRK13604 218 QSEVIDLLDSIRSEQCKLYSLIGSSHDLGENLV 250 (307)
T ss_pred HHHHHHHHHHhccCCcEEEEeCCCccccCcchH
Confidence 999999999986567999999999999987764
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=202.63 Aligned_cols=220 Identities=27% Similarity=0.349 Sum_probs=150.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|+.... ..++++++++|+.++++.+..+ +++++||
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-----KVILVGH 73 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-----SEEEEEE
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-----ccccccc
Confidence 799999999986 6788999995 799999999999999998653 2357888999999999988775 9999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC---CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHH
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK---PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLA 216 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (308)
|+||.+++.++.++|++|+++|++++......... ...................... . ..............
T Consensus 74 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASR----F-FYRWFDGDEPEDLI 148 (228)
T ss_dssp THHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----H-HHHHHTHHHHHHHH
T ss_pred ccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccc----c-cccccccccccccc
Confidence 99999999999999999999999999764321100 0000000000000000000000 0 00000000001111
Q ss_pred hhCCCCCCCcchHHHHHHHHH---HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 217 LSSPRRPVARPRAATALELLR---VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
.. .......... ...+....++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 149 RS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFL 217 (228)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTH
T ss_pred cc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCcc
Confidence 00 1111222221 224555677888999999999999999988999998888 689999999999999
Q ss_pred c-CCchhhHHH
Q 035721 294 I-GEPEENVEL 303 (308)
Q Consensus 294 ~-~~~~~~~~~ 303 (308)
+ ++|++++++
T Consensus 218 ~~~~p~~~~~a 228 (228)
T PF12697_consen 218 FLEQPDEVAEA 228 (228)
T ss_dssp HHHSHHHHHHH
T ss_pred HHHCHHHHhcC
Confidence 9 999998764
|
... |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=200.77 Aligned_cols=246 Identities=17% Similarity=0.155 Sum_probs=155.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.+|.++.|.. |. +.+|+|||+||++.+.. .|..+.+.|.+.||+|+++|+||||.|.......++++++++++.
T Consensus 4 ~~~~~~~~~~--~~---~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~ 77 (273)
T PLN02211 4 ENGEEVTDMK--PN---RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLI 77 (273)
T ss_pred cccccccccc--cc---CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHH
Confidence 4677777754 32 34789999999998876 778999999888999999999999988654433358888899999
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh---hhhCCC---
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV---AWLVPT--- 192 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--- 192 (308)
++++.+.. ..+++++||||||.++..++.++|++|+++|++++........ ......... ......
T Consensus 78 ~~i~~l~~----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~ 149 (273)
T PLN02211 78 DFLSSLPE----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ----TDEDMKDGVPDLSEFGDVYEL 149 (273)
T ss_pred HHHHhcCC----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC----HHHHHhccccchhhhccceee
Confidence 88887642 1399999999999999999999999999999998753211100 000000000 000000
Q ss_pred -cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH-----HHH--HHhhhhcCCC-CcceEEEeeCCCcc
Q 035721 193 -WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL-----RVS--RDLQGRFEEV-EVPMLICHGGDDVV 263 (308)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~i-~~P~l~i~g~~D~~ 263 (308)
+...... ..................+. ............ ... .+..+...++ ++|+++|.|++|..
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ 224 (273)
T PLN02211 150 GFGLGPDQ-PPTSAIIKKEFRRKILYQMS----PQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHV 224 (273)
T ss_pred eeccCCCC-CCceeeeCHHHHHHHHhcCC----CHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCC
Confidence 0000000 00000010110111100000 000000000000 000 0111223345 78999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
+|++.++.+.+.+ ++.+++.++ +||.++ ++|+++++.|.+
T Consensus 225 ip~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 225 VKPEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred CCHHHHHHHHHhC--CccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 9999999999988 567899997 899999 999999988875
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=210.86 Aligned_cols=255 Identities=15% Similarity=0.061 Sum_probs=154.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-----------HHHHHHH---HHHHcCCeEEEecCCCCcCCCCc
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-----------IVQLTAV---LFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
..+|.+++|..+|+.+ . ++||+||+.++... +|..+.+ .|...+|+|+++|+||||.|...
T Consensus 42 ~~~~~~l~y~~~G~~~----~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~ 116 (343)
T PRK08775 42 GLEDLRLRYELIGPAG----A-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV 116 (343)
T ss_pred CCCCceEEEEEeccCC----C-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC
Confidence 4478899999887522 2 36777666655542 5677775 56444699999999999988432
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
.++.+++++|+.++++.++.+. .++++||||||++|+.+|.++|++|+++|++++....... ........
T Consensus 117 ---~~~~~~~a~dl~~ll~~l~l~~----~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~~~~~ 186 (343)
T PRK08775 117 ---PIDTADQADAIALLLDALGIAR----LHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAWRALQ 186 (343)
T ss_pred ---CCCHHHHHHHHHHHHHHcCCCc----ceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHHHHHH
Confidence 2477889999999999987751 3579999999999999999999999999999986432110 00000000
Q ss_pred HHhhhhCCCcccccCC----CCCCCcccccHH-HHHHHhhCCCCCC-------------------CcchHHHHHHHHHHH
Q 035721 184 FTVAWLVPTWRVVPTR----GSLPMVSFKEEW-KRKLALSSPRRPV-------------------ARPRAATALELLRVS 239 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 239 (308)
................ .......+.... ....+........ ...............
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 0000000000000000 000000000000 0000000000000 000000011111110
Q ss_pred HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC-Cccccc-CCchhhHHHhhhcC
Q 035721 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG-MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 240 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~~i 308 (308)
......+.++++|+|+++|++|.++|++..+.+.+.+. ++++++++++ +||.++ ++|+++++.|.+++
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL 336 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDRIDAILTTAL 336 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHHHHHHHHHHH
Confidence 01122467899999999999999999999999888874 4789999985 999999 99999999988764
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=201.27 Aligned_cols=230 Identities=19% Similarity=0.190 Sum_probs=140.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+|||+||++++.. .|+.+.+.| + +|+|+++|+||||.|+.+.. .+++++++|+.++++.+..+ +++++
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~~-----~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNIL-----PYWLV 71 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCCC-----CeEEE
Confidence 568999999998886 778999988 3 59999999999999987554 37889999999999987665 99999
Q ss_pred EechhhHHHHHHHHhcCCC-ccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC----CCCCCcccccHHH
Q 035721 138 SESLGGAIALYITLRQKGA-WDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR----GSLPMVSFKEEWK 212 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 212 (308)
||||||.+|+.++.++|++ |++++++++.......................+.......... ...... ......
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNAEQR 150 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCccHH
Confidence 9999999999999999764 9999999876433211000000000000000000000000000 000000 000000
Q ss_pred HHHHhhCCCCCCCcchHHHHHHHH--HHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 213 RKLALSSPRRPVARPRAATALELL--RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
...... ..... ........... ....+..+.+.++++|+++++|++|..+. .+.+. .++++++++++|
T Consensus 151 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i~~~g 220 (242)
T PRK11126 151 QQLVAK-RSNNN-GAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVIPNAG 220 (242)
T ss_pred HHHHHh-cccCC-HHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEeCCCC
Confidence 000000 00000 00000000000 00013345678899999999999998552 22333 268999999999
Q ss_pred cccc-CCchhhHHHhhhcC
Q 035721 291 HQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 291 H~~~-~~~~~~~~~i~~~i 308 (308)
|+++ ++|+++++.|.+++
T Consensus 221 H~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 221 HNAHRENPAAFAASLAQIL 239 (242)
T ss_pred CchhhhChHHHHHHHHHHH
Confidence 9999 99999999987754
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=207.27 Aligned_cols=262 Identities=13% Similarity=0.058 Sum_probs=159.1
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch------------HHHHHHH---HHHHcCCeEEEecCCCC-cCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW------------IVQLTAV---LFAKSGFATCAIDHQGH-GFSD 101 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~-G~s~ 101 (308)
+.+|.+++|..+|..++ ..+|+|||+||++++... +|..++. .|...+|+|+++|++|+ |.|.
T Consensus 29 ~~~~~~~~y~~~G~~~~-~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 29 VLPPVELAYETYGTLNA-DRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CcCCceEEEEeccccCC-CCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 34677889999985432 236899999999998762 3666652 34345799999999983 5443
Q ss_pred Cccc-------------cCCCcchHHHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 102 GLVA-------------HIPDLNPVVEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 102 ~~~~-------------~~~~~~~~~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+.. ..++++++++++.+++++++.. + ++++||||||.+++.++.++|++|+++|++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT-----RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC-----CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 3210 1368999999999999998876 7 5899999999999999999999999999999865
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccC--------------------------------CCCCCCcc--------c
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPT--------------------------------RGSLPMVS--------F 207 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~--------~ 207 (308)
....... .........+.. .+.+..... ........ .
T Consensus 183 ~~~~~~~--~~~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~ 259 (379)
T PRK00175 183 RLSAQNI--AFNEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEF 259 (379)
T ss_pred ccCHHHH--HHHHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccc
Confidence 4321100 000000000000 000000000 00000000 0
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC-
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVS-------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK- 279 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~- 279 (308)
................................ .++.+.+.+|++|+|+|+|++|.++|++.++.+.+.+++.
T Consensus 260 ~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~ 339 (379)
T PRK00175 260 QVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAG 339 (379)
T ss_pred hHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcC
Confidence 00000000000000000000011111111110 1245667899999999999999999999999999999431
Q ss_pred -CCcEEEec-CCccccc-CCchhhHHHhhhcC
Q 035721 280 -DKTLSIYP-GMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 -~~~~~~~~-~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++++++ ++||.++ ++|+++++.|.+++
T Consensus 340 ~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL 371 (379)
T PRK00175 340 ADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFL 371 (379)
T ss_pred CCeEEEEeCCCCCchhHhcCHHHHHHHHHHHH
Confidence 13777775 8999999 99999999888763
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=206.53 Aligned_cols=264 Identities=15% Similarity=0.133 Sum_probs=161.0
Q ss_pred cccccceeEEcCCCcEEEEEEecCC--CCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPL--PPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~--~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+.++...+.+.||..+.+.++.+. .....+|+||++||+++++. .|+..++..+.++||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 4556777889999998887655421 11234789999999987764 25566777777889999999999999997643
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC--ccEEEEeCCcCCCCcC---CCCCc--
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQK---FKPPW-- 177 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~---~~~~~-- 177 (308)
... ....+++|+.++++++.... +..+++++||||||.+++.++.+++++ |.++++++++...... .....
T Consensus 148 ~~~-~~~~~~~Dl~~~i~~l~~~~-~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~ 225 (388)
T PLN02511 148 PQF-YSASFTGDLRQVVDHVAGRY-PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNN 225 (388)
T ss_pred cCE-EcCCchHHHHHHHHHHHHHC-CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHH
Confidence 322 34567899999999999864 445899999999999999999999987 8888888775543100 00000
Q ss_pred h-hhhhHHHhhhhCCCccc--ccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 178 P-LEHLLFTVAWLVPTWRV--VPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 178 ~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
. ...+...+......... ......+..... ......+................ .++.. .+....+.+|++|+
T Consensus 226 ~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~---~yy~~-~s~~~~L~~I~vPt 301 (388)
T PLN02511 226 VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD---AYYSN-SSSSDSIKHVRVPL 301 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH---HHHHH-cCchhhhccCCCCe
Confidence 0 00011111111110000 000000000000 00000000000000000111111 11111 22345688999999
Q ss_pred EEEeeCCCcccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 254 LICHGGDDVVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
|+|+|++|++++.+.. ....+.. +++++++++++||..+ +.|+.
T Consensus 302 LiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 302 LCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred EEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCC
Confidence 9999999999987654 3344445 7899999999999999 88865
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=198.17 Aligned_cols=268 Identities=26% Similarity=0.259 Sum_probs=163.0
Q ss_pred ceeEEcCCCc-EEEEEEecCCC-----CCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCc-CCCCcc
Q 035721 33 SEYITNSRGL-RLFTQWWTPLP-----PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHG-FSDGLV 104 (308)
Q Consensus 33 ~~~~~~~~g~-~l~~~~~~~~~-----~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G-~s~~~~ 104 (308)
...+....|. ++...+++... ....+++||++|||+++.. .|+.+...|.++ |+.|+++|++|+| .|..+.
T Consensus 27 ~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~ 105 (326)
T KOG1454|consen 27 STSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR 105 (326)
T ss_pred ceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCCCCCC
Confidence 3344444453 55555555441 1135899999999999665 778888888776 5999999999999 555566
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEE---EeCCcCCCCcCCCCC--chh
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLI---LNGAMCGISQKFKPP--WPL 179 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~~--~~~ 179 (308)
...|+..++++.+..++...... +++++|||+||.+|+.+|+.+|+.|+++| ++++.....+..... ...
T Consensus 106 ~~~y~~~~~v~~i~~~~~~~~~~-----~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 106 GPLYTLRELVELIRRFVKEVFVE-----PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCceehhHHHHHHHHHHHhhcCc-----ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 66678888888888887777666 89999999999999999999999999999 555543322211000 000
Q ss_pred hhhHHHhhhhCCCcccccCC---CCCCCccc---ccHH-HHHHHhhCCCC-----CCCcchHHHHHHHHHHHHHhhhhcC
Q 035721 180 EHLLFTVAWLVPTWRVVPTR---GSLPMVSF---KEEW-KRKLALSSPRR-----PVARPRAATALELLRVSRDLQGRFE 247 (308)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (308)
...........+.....+.. ..+..... .+.. ........... .......................+.
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 00111111111110000000 00000000 0000 00000000000 0000000000000000012233456
Q ss_pred CCC-cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 248 EVE-VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 248 ~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++. +|+++++|++|+++|.+.+..+.+.+ +++++++++++||.++ +.|+++++.+..+|
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 665 99999999999999999999999988 7999999999999999 99999999988764
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=194.95 Aligned_cols=240 Identities=22% Similarity=0.241 Sum_probs=145.6
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHH-HHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVED-AISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~~~~~~~~~~~~~ 135 (308)
+|+||++||++++.. .|..+.+.|+ +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+..+ +++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 73 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-----PFF 73 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-----eEE
Confidence 368999999998887 6689999998 789999999999999976543 33466777777 55565555443 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---hHHHhhhh-CCCccc-ccCCCCCCCcccccH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH---LLFTVAWL-VPTWRV-VPTRGSLPMVSFKEE 210 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 210 (308)
++|||+||.+++.++.++|++|++++++++................ ....+... ...... ......+........
T Consensus 74 l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T TIGR03695 74 LVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPP 153 (251)
T ss_pred EEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCCh
Confidence 9999999999999999999999999999886543321110000000 00000000 000000 000000000000001
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
............. ............. ...+....+.++++|+++++|++|..++ +..+.+.+.. ++++++++++
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~~~~~ 229 (251)
T TIGR03695 154 EQRQALRAKRLAN-NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PNLTLVIIAN 229 (251)
T ss_pred HHhHHHHHhcccc-cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CCCcEEEEcC
Confidence 1111111110000 0011111111100 0112234467889999999999998763 5566666666 6789999999
Q ss_pred Cccccc-CCchhhHHHhhhcC
Q 035721 289 MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~i 308 (308)
+||+++ ++|+++++.+.++|
T Consensus 230 ~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 230 AGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred CCCCcCccChHHHHHHHHHHh
Confidence 999999 99999999888764
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-28 Score=196.51 Aligned_cols=251 Identities=18% Similarity=0.085 Sum_probs=142.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch----HHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP----VVEDAI 118 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~----~~~d~~ 118 (308)
.+++..+.++ ..+|+|||+||++++.. .|....+.|.+. |+|+++|+||||.|+.+.....+.++ +++++.
T Consensus 93 ~~~~~~~~~~---~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 93 FINTVTFDSK---EDAPTLVMVHGYGASQG-FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFE 167 (402)
T ss_pred eEEEEEecCC---CCCCEEEEECCCCcchh-HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHH
Confidence 5555544332 24789999999998776 445667888764 99999999999999765322112222 334444
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh----hHH-Hhhhh----
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH----LLF-TVAWL---- 189 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~-~~~~~---- 189 (308)
++++.+. ..+++++||||||.+++.++.++|++|+++|+++|................ ... .....
T Consensus 168 ~~~~~l~-----~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 168 EWRKAKN-----LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHHcC-----CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 5544443 339999999999999999999999999999999886433221110000000 000 00000
Q ss_pred -CCCcccccCC----------------CCCCCcccccHHHHH--HHhhCCCCCCCcchHHHHHHHH-----HHHHHhhhh
Q 035721 190 -VPTWRVVPTR----------------GSLPMVSFKEEWKRK--LALSSPRRPVARPRAATALELL-----RVSRDLQGR 245 (308)
Q Consensus 190 -~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 245 (308)
.+........ ............... .+.... .............. ....+....
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHT--LAAKASGELCLKYIFSFGAFARKPLLES 320 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHh--hcCCCchHHHHHHhccCchhhcchHhhh
Confidence 0000000000 000000000000000 000000 00000000000000 011344556
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.++++|+++|+|++|.+.+ .....+.+... ..+++++++++||+++ ++|++|++.|.++
T Consensus 321 l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~ 381 (402)
T PLN02894 321 ASEWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYA 381 (402)
T ss_pred cccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHH
Confidence 78899999999999998765 55666666553 3589999999999999 9999999998764
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=194.89 Aligned_cols=250 Identities=16% Similarity=0.147 Sum_probs=150.1
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
...++...+|.+++|..+++++ .++|||+||++++.. .+ .+...+...+|+|+++|+||||.|+.... ..++.
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~----~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 78 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD----GKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTT 78 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC----CCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 3457777889999998876432 457999999877654 32 34445555689999999999999986542 23466
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC------CCchhhhhHH
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK------PPWPLEHLLF 184 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~ 184 (308)
+++++|+..++++++.. +++++||||||.+++.++.++|++++++|++++......... ..........
T Consensus 79 ~~~~~dl~~l~~~l~~~-----~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (306)
T TIGR01249 79 WDLVADIEKLREKLGIK-----NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQ 153 (306)
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHH
Confidence 78888998888887665 899999999999999999999999999999987644221000 0000000000
Q ss_pred HhhhhCCCccc-ccCCCCCCCcccc-cHH----HHHH---Hhh-CCCCC-----C--CcchHHHHHHHH----HH-----
Q 035721 185 TVAWLVPTWRV-VPTRGSLPMVSFK-EEW----KRKL---ALS-SPRRP-----V--ARPRAATALELL----RV----- 238 (308)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~----~~~~---~~~-~~~~~-----~--~~~~~~~~~~~~----~~----- 238 (308)
......+.... ......+....+. ... .... ... ..... . ..+......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T TIGR01249 154 RFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFL 233 (306)
T ss_pred HHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchh
Confidence 00000000000 0000000000000 000 0000 000 00000 0 001111111110 00
Q ss_pred --HHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 239 --SRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 239 --~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.......+.++ ++|+++++|++|.++|.+.++.+++.+ +++++++++++||.++
T Consensus 234 ~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 234 DVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF 290 (306)
T ss_pred cCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC
Confidence 01133455667 699999999999999999999999998 6789999999999997
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=191.18 Aligned_cols=241 Identities=12% Similarity=0.048 Sum_probs=156.0
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+.+.+...+...+|.+|.+..+.|... .+.|+||++||+++....+|..+++.|+++||.|+++|+||+|.|......
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~-~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~- 242 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGD-GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT- 242 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCC-CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-
Confidence 445677788888888899988888643 567888888887765444667788999999999999999999998653211
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+.. ....++++++..... +..+++++|||+||.+++.+|..+|++++++|++++...... .............
T Consensus 243 ~d~~---~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~--~~~~~~~~~p~~~ 317 (414)
T PRK05077 243 QDSS---LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLL--TDPKRQQQVPEMY 317 (414)
T ss_pred ccHH---HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhh--cchhhhhhchHHH
Confidence 1222 222455566654422 556999999999999999999999999999999998653110 0000000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhc-CCCCcceEEEeeCCCccc
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRF-EEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~i~~P~l~i~g~~D~~~ 264 (308)
...+.. .. .... .+ .......+... ......+ .++++|+|+|+|++|.++
T Consensus 318 ~~~la~-~l-----g~~~---~~-------------------~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 318 LDVLAS-RL-----GMHD---AS-------------------DEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHH-Hh-----CCCC---CC-------------------hHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCC
Confidence 000000 00 0000 00 00000000000 0001112 578999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|++.++.+.+.. ++.++++++++ ++ +.++++.+.+.++|
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e~~~~~~~~i~~wL 409 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYRNFDKALQEISDWL 409 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccCCHHHHHHHHHHHH
Confidence 999999888777 68899999986 34 78888888887653
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=196.29 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=153.3
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
..++.+++|..++++ +.++|||+||++++.. .|..+.+.|... |+|+++|+||||.|...... .+++++++++
T Consensus 115 ~~~~~~i~~~~~g~~----~~~~vl~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~ 187 (371)
T PRK14875 115 RIGGRTVRYLRLGEG----DGTPVVLIHGFGGDLN-NWLFNHAALAAG-RPVIALDLPGHGASSKAVGA-GSLDELAAAV 187 (371)
T ss_pred eEcCcEEEEecccCC----CCCeEEEECCCCCccc-hHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHHH
Confidence 345677887765542 2578999999998887 567888888765 99999999999999654333 4788888888
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch--------hhhhHHHhhhh
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP--------LEHLLFTVAWL 189 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 189 (308)
..+++.+... +++++|||+||.+++.+|.++|+++.++|++++....... ..... ...+...+...
T Consensus 188 ~~~~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 188 LAFLDALGIE-----RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-NGDYIDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHHHHhcCCc-----cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-chhHHHHhhcccchhHHHHHHHHH
Confidence 8888776544 8999999999999999999999999999999876432210 00000 00000000000
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHH-HH---HHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALEL-LR---VSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
... ....... ........................ .. ...+....+.++++|+++++|++|.++|
T Consensus 262 ~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp 329 (371)
T PRK14875 262 FAD-----------PALVTRQ-MVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP 329 (371)
T ss_pred hcC-----------hhhCCHH-HHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC
Confidence 000 0000000 000000000000000000000000 00 0123334567889999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++..+.+. .++++.+++++||+++ ++|+++++.|.+++
T Consensus 330 ~~~~~~l~-----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 368 (371)
T PRK14875 330 AAHAQGLP-----DGVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368 (371)
T ss_pred HHHHhhcc-----CCCeEEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 87665432 4689999999999999 99999999887764
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=190.54 Aligned_cols=261 Identities=15% Similarity=0.095 Sum_probs=154.9
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.+......+.+.||..+.+.+........++|+||++||++++.. .+...+++.|.++||+|+++|+||||.+......
T Consensus 28 ~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 28 LFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred CCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 345556678889998877654322222245789999999987744 2556789999999999999999999987543222
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC--ccEEEEeCCcCCCCcCC---CCC--chh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQKF---KPP--WPL 179 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~---~~~--~~~ 179 (308)
.+. ....+|+..+++.+.... +..+++++||||||.+++.++.++++. +.++|+++++....... ... ...
T Consensus 108 ~~~-~~~~~D~~~~i~~l~~~~-~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~ 185 (324)
T PRK10985 108 IYH-SGETEDARFFLRWLQREF-GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVY 185 (324)
T ss_pred eEC-CCchHHHHHHHHHHHHhC-CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHH
Confidence 122 234688888888887653 456899999999999988888877644 88999998865432110 000 000
Q ss_pred hh-hHHHhhhhCCC-cccccCCCCCCC-cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEE
Q 035721 180 EH-LLFTVAWLVPT-WRVVPTRGSLPM-VSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 180 ~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 256 (308)
.. +...+...... ............ .........+.......... .......++.. .+..+.++++++|+++|
T Consensus 186 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~-~~~~~~l~~i~~P~lii 261 (324)
T PRK10985 186 QRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQ-CSALPLLNQIRKPTLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHH-CChHHHHhCCCCCEEEE
Confidence 00 00011100000 000000000000 00000000000000000001 11112222222 22346678999999999
Q ss_pred eeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CC
Q 035721 257 HGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 296 (308)
+|++|++++++....+.+.. +++++++++++||+.+ +.
T Consensus 262 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred ecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCC
Confidence 99999999988777776555 6789999999999998 53
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=220.60 Aligned_cols=239 Identities=18% Similarity=0.182 Sum_probs=150.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-------ccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-------AHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
.+++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|.... ...++++.+++++.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC--
Confidence 3679999999999987 678899999764 999999999999997542 12357788889999998887655
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh---hhHHHh-----hhhCCCcccccCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE---HLLFTV-----AWLVPTWRVVPTRGS 201 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~ 201 (308)
+++++||||||.+++.++.++|++|+++|++++............... .....+ ..+...+... .
T Consensus 1446 ---~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~ 1518 (1655)
T PLN02980 1446 ---KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSG----E 1518 (1655)
T ss_pred ---CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccH----H
Confidence 999999999999999999999999999999987544321110000000 000000 0000000000 0
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 279 (308)
+.......+.......... ................ ...+..+.+.++++|+|+|+|++|..++ +.++++.+.+++.
T Consensus 1519 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1519 LWKSLRNHPHFNKIVASRL-LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HhhhhccCHHHHHHHHHHH-hcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0000000011110000000 0000001111111100 0123446688999999999999999874 6677777776431
Q ss_pred ----------CCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 280 ----------DKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 ----------~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+++++++++||+++ ++|+++++.|.+++
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL 1636 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFL 1636 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 258999999999999 99999999988764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-25 Score=170.05 Aligned_cols=252 Identities=14% Similarity=0.057 Sum_probs=151.2
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc---chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES---SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
..+|.++....+.|.+. .++.||++||++... ...+..+++.|+++||.|+++|+||||.|.+.. .+++++.
T Consensus 8 ~~~~~~l~g~~~~p~~~--~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~ 82 (274)
T TIGR03100 8 SCEGETLVGVLHIPGAS--HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGID 82 (274)
T ss_pred EcCCcEEEEEEEcCCCC--CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHH
Confidence 35577888888877653 355777777755321 113467889999999999999999999987542 3677888
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
+|+.++++.+.....+..+++++|||+||.+++.++.. +++|+++|+++|........... ..... ..........
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~ 158 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS-RIRHY--YLGQLLSADF 158 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH-HHHHH--HHHHHhChHH
Confidence 99999999987642123479999999999999999765 46899999999874422111111 11010 0000000000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCC--CCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH---
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRP--VARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV--- 269 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--- 269 (308)
.. .+......-......+......+ ........ ....++...+..+++|+++++|.+|...+ ...
T Consensus 159 ~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~ 228 (274)
T TIGR03100 159 WR----KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSV 228 (274)
T ss_pred HH----HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHh
Confidence 00 00000000000000011000000 00000000 02234455667779999999999998863 222
Q ss_pred ---HHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhcC
Q 035721 270 ---EELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGEM 308 (308)
Q Consensus 270 ---~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~i 308 (308)
..+.+.+..++++++.+++++|++. ..++++.+.|.+++
T Consensus 229 ~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL 272 (274)
T TIGR03100 229 LGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWL 272 (274)
T ss_pred ccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHH
Confidence 4445545446899999999999995 44588888887764
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-26 Score=195.19 Aligned_cols=260 Identities=18% Similarity=0.155 Sum_probs=152.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcch
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNP 112 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~ 112 (308)
..+...+|.+|+|..+++.+ .|+|||+||++++.. .|..+.+.| ..||+|+++|+||||.|+... ...+++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~----~~~ivllHG~~~~~~-~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD----RPTVVLVHGYPDNHE-VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLAR 78 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC----CCeEEEEcCCCchHH-HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHH
Confidence 34556789999999886532 678999999998876 678899999 557999999999999998643 23468999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCCCCc-----CCCCCchhhhhHHH
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCGISQ-----KFKPPWPLEHLLFT 185 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~-----~~~~~~~~~~~~~~ 185 (308)
+++|+..+++.+... .+++++||||||.+++.++.+. ++++..++.+++...... ..............
T Consensus 79 ~a~dl~~~i~~l~~~----~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (582)
T PRK05855 79 LADDFAAVIDAVSPD----RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA 154 (582)
T ss_pred HHHHHHHHHHHhCCC----CcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH
Confidence 999999999988654 2599999999999998887762 344555544443211000 00000000000000
Q ss_pred hhhhCCCccc----ccC-CCCCCCcccccHHHHHHHhhCCCCCCCcchH-------HHHHHHHHH---HHHhhhhcCCCC
Q 035721 186 VAWLVPTWRV----VPT-RGSLPMVSFKEEWKRKLALSSPRRPVARPRA-------ATALELLRV---SRDLQGRFEEVE 250 (308)
Q Consensus 186 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~i~ 250 (308)
.......+.. ... ........... ................... ......... ..........++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 155 LGQLLRSWYIYLFHLPVLPELLWRLGLGR-AWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHhhhHHHHHHhCCCCcHHHhccchhh-HHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 0000000000 000 00000000000 0000000000000000000 000000000 011122345689
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+|+++|+|++|.+++++..+.+.+.+ ++.++++++ +||+++ ++|+++.+.|.++
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 288 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQVLAAAVAEF 288 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhHHHHHHHHH
Confidence 99999999999999999988888776 567888776 799999 9999998888765
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=167.04 Aligned_cols=257 Identities=19% Similarity=0.160 Sum_probs=167.4
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
.++.|..+.........|+++++||+.++.. -|+.+...|+.. +..|+++|.|.||.|+..... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 4566666522222356899999999999997 678999999876 789999999999999887665 688999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhh-HHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGG-AIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR 199 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (308)
++..+... ...++.++|||||| .+++..+...|+.+..+|+++-.+..... ...........+.............
T Consensus 113 i~~v~~~~-~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~--~~~e~~e~i~~m~~~d~~~~~~~~r 189 (315)
T KOG2382|consen 113 IDGVGGST-RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGR--SYGEYRELIKAMIQLDLSIGVSRGR 189 (315)
T ss_pred HHHccccc-ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCc--ccchHHHHHHHHHhccccccccccH
Confidence 99886321 22399999999999 77888888899999999988765541111 1111111111111111110000000
Q ss_pred ----CCCCCcccccHHHHHHHhhCCC------CCCCcchHHHHHHHHHH--HHHhhhhc--CCCCcceEEEeeCCCcccC
Q 035721 200 ----GSLPMVSFKEEWKRKLALSSPR------RPVARPRAATALELLRV--SRDLQGRF--EEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 200 ----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~l~i~g~~D~~~~ 265 (308)
..+.. ...+....+....+.. .......+.....++.. ...+...+ .....||+++.|.++..++
T Consensus 190 ke~~~~l~~-~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 190 KEALKSLIE-VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHHHHHHH-HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 00000 1111112222222221 11111122233333322 12222333 5568999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
.+.-.++.+.+ ++++++.++++||+++ |+|+++.+.|.++
T Consensus 269 ~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~~~~~i~~F 309 (315)
T KOG2382|consen 269 DEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEEFIESISEF 309 (315)
T ss_pred hhHHHHHHHhc--cchheeecccCCceeecCCHHHHHHHHHHH
Confidence 99999998888 7899999999999999 9999999998875
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=176.78 Aligned_cols=261 Identities=13% Similarity=0.037 Sum_probs=159.1
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccc------------hHHHHHHH---HHHHcCCeEEEecCCCCcCCC---
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS------------WIVQLTAV---LFAKSGFATCAIDHQGHGFSD--- 101 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~--- 101 (308)
...+|.|..||..+. ...++||++|++++++. .||..++- .|-...|.||++|..|-|.|.
T Consensus 39 ~~~~~~Y~t~G~ln~-~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 39 PDVQMGYETYGTLNR-AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred CCceEEEEeccccCC-CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 457899999998665 44689999999988542 24554432 243345999999999876521
Q ss_pred ----C-----c--------cccCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 102 ----G-----L--------VAHIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 102 ----~-----~--------~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
+ + .-..++++++++++.+++++++.. ++. ++||||||++++.+|.++|++|+++|++
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~-----~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA-----RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC-----CceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 1 0 112257889999999999988876 776 9999999999999999999999999999
Q ss_pred CCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC-CCCCc-----------ccc-cHHHHHHHhhC-----------
Q 035721 164 GAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG-SLPMV-----------SFK-EEWKRKLALSS----------- 219 (308)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~-~~~~~~~~~~~----------- 219 (308)
++......... ..........+ ..-+.+....... .-... ... ..+........
T Consensus 193 a~~~~~~~~~~-~~~~~~~~~ai-~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~ 270 (389)
T PRK06765 193 IGNPQNDAWTS-VNVLQNWAEAI-RLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKV 270 (389)
T ss_pred ecCCCCChhHH-HHHHHHHHHHH-HhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccc
Confidence 87544221100 00000000000 0111110000000 00000 000 00000000000
Q ss_pred -------------CCCCCCcchHHHHHHHHHHHH---------HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 220 -------------PRRPVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 220 -------------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
............+..+.+... ++.+.+.++++|+++|+|++|.++|++.++.+.+.++
T Consensus 271 ~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp 350 (389)
T PRK06765 271 STLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQ 350 (389)
T ss_pred cchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 000000000111111111111 3455677899999999999999999999999999885
Q ss_pred C--CCCcEEEecC-Cccccc-CCchhhHHHhhhcC
Q 035721 278 S--KDKTLSIYPG-MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 278 ~--~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~~i 308 (308)
. ++++++++++ +||..+ ++|+++.+.|.+++
T Consensus 351 ~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL 385 (389)
T PRK06765 351 KQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFL 385 (389)
T ss_pred hcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHH
Confidence 3 3689999985 999999 99999999888764
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=155.54 Aligned_cols=215 Identities=17% Similarity=0.209 Sum_probs=161.2
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHH-HcCCeEEEecCCCCcCCCCcc
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~ 104 (308)
..+++++...+.+.|..++...+...++ +.|+++++||..|+.... -..+..+- .-+..|+.+++||+|.|.+.+
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp 124 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSEGSP 124 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecccC---CCceEEEEccCCCcccch-hhHHHHHHHHcCceEEEEEeeccccCCCCc
Confidence 3488999999999999999987776443 599999999999998733 34555443 447899999999999999865
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
. -+.+.-|..++++++..+.. +..+++++|.|+||.+|+.+|++..+++.++|+-+++...+....+-...
T Consensus 125 s----E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p---- 196 (300)
T KOG4391|consen 125 S----EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP---- 196 (300)
T ss_pred c----ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc----
Confidence 3 34456688889999988765 78899999999999999999999999999999999876653221110000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
...+.+ .... .+........+...+.|.|++.|.+|.+
T Consensus 197 -~~~k~i------------~~lc-----------------------------~kn~~~S~~ki~~~~~P~LFiSGlkDel 234 (300)
T KOG4391|consen 197 -FPMKYI------------PLLC-----------------------------YKNKWLSYRKIGQCRMPFLFISGLKDEL 234 (300)
T ss_pred -chhhHH------------HHHH-----------------------------HHhhhcchhhhccccCceEEeecCcccc
Confidence 000000 0000 0000111233446688999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+||..++++++.+++...++..+|++.|+-.
T Consensus 235 VPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 235 VPPVMMRQLYELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred CCcHHHHHHHHhCchhhhhheeCCCCccCce
Confidence 9999999999999888899999999999866
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=157.60 Aligned_cols=237 Identities=19% Similarity=0.170 Sum_probs=157.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
...+|..|.|..++..+. .|++++|.-++....|.+....|.+. .+.++++|.||+|.|.++.... ..+-+.+
T Consensus 26 v~vng~ql~y~~~G~G~~-----~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~ 99 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGPN-----YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMK 99 (277)
T ss_pred eeecCceeeeeecCCCCc-----eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHH
Confidence 356899999999886543 58999998877654455544444332 4899999999999998876652 4444444
Q ss_pred ---HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 116 ---DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 116 ---d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
+...+++.++.+ ++.++|+|-||..|+..|+++++.|..+|+.++......... .....++...++.+.
T Consensus 100 Da~~avdLM~aLk~~-----~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~---ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLE-----PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA---MAFKGIRDVNKWSAR 171 (277)
T ss_pred hHHHHHHHHHHhCCC-----CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH---HHHhchHHHhhhhhh
Confidence 444555555555 999999999999999999999999999999888655442211 011111111111111
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH------HHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS------RDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
.+..... .+....+...+ ....+..... .-.+..+++++||++|++|++|++++.
T Consensus 172 ~R~P~e~-~Yg~e~f~~~w------------------a~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~ 232 (277)
T KOG2984|consen 172 GRQPYED-HYGPETFRTQW------------------AAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGD 232 (277)
T ss_pred hcchHHH-hcCHHHHHHHH------------------HHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCC
Confidence 1110000 00011111111 1111111111 123456889999999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..+.-+.... +.+++.+.|.++|.++ ..+++|+..+.+++
T Consensus 233 ~hv~fi~~~~--~~a~~~~~peGkHn~hLrya~eFnklv~dFl 273 (277)
T KOG2984|consen 233 PHVCFIPVLK--SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFL 273 (277)
T ss_pred CCccchhhhc--ccceEEEccCCCcceeeechHHHHHHHHHHH
Confidence 8888777777 6799999999999999 99999999988764
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=177.38 Aligned_cols=276 Identities=13% Similarity=0.097 Sum_probs=168.4
Q ss_pred ccccccccccceeEEcCCCcEEEEEEecCCC---CCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecC
Q 035721 23 FYARHSVSHSSEYITNSRGLRLFTQWWTPLP---PAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~---~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~ 94 (308)
+....+++.++..+++.||..|...+..+.. +..++|+|+++||+++++..|. +.++..|+++||+|+++|+
T Consensus 36 ~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~ 115 (395)
T PLN02872 36 LIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNV 115 (395)
T ss_pred HHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccc
Confidence 3455689999999999999999987764332 1134689999999987766321 3566778899999999999
Q ss_pred CCCcCCCCc-------cc-cCCCcchHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEE
Q 035721 95 QGHGFSDGL-------VA-HIPDLNPVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLIL 162 (308)
Q Consensus 95 ~G~G~s~~~-------~~-~~~~~~~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl 162 (308)
||++.|.+. .. ..+++++++ .|+.++++++... ...+++++|||+||.+++.++ .+|+ +|+.+++
T Consensus 116 RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~--~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~ 192 (395)
T PLN02872 116 RGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI--TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAAL 192 (395)
T ss_pred cccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc--cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHH
Confidence 998866331 11 124677777 7999999998754 346999999999999998555 5665 6888999
Q ss_pred eCCcCCCCcCCCCCchhhhhHH----HhhhhCCCcccccCCCCCCC----cccc-------------------cHHHHHH
Q 035721 163 NGAMCGISQKFKPPWPLEHLLF----TVAWLVPTWRVVPTRGSLPM----VSFK-------------------EEWKRKL 215 (308)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~-------------------~~~~~~~ 215 (308)
++|.........+. ...+.. .+...+....+.+.. .... ..+. +......
T Consensus 193 l~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 193 LCPISYLDHVTAPL--VLRMVFMHLDQMVVAMGIHQLNFRS-DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred hcchhhhccCCCHH--HHHHHHHhHHHHHHHhcCceecCCc-HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 99876543211111 000000 000001100000000 0000 0000 0000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHH----------------------HHhhhhcCCC--CcceEEEeeCCCcccChHHHHH
Q 035721 216 ALSSPRRPVARPRAATALELLRVS----------------------RDLQGRFEEV--EVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
+... .....+.+....+.... ....-.++++ ++|+++++|++|.+++++.++.
T Consensus 270 ~~~~---~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~ 346 (395)
T PLN02872 270 YLEY---EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH 346 (395)
T ss_pred HHhc---CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH
Confidence 0000 00001111111111100 0111135666 5899999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCccc---cc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKTLSIYPGMWHQ---LI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~---~~-~~~~~~~~~i~~~i 308 (308)
+.+.++. .++++.++++||. .. +.|+++.+.|++++
T Consensus 347 l~~~Lp~-~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL 386 (395)
T PLN02872 347 TLAELPS-KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFF 386 (395)
T ss_pred HHHHCCC-ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHH
Confidence 9999853 3688899999995 34 77888888887753
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=161.36 Aligned_cols=197 Identities=21% Similarity=0.180 Sum_probs=124.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc-------chHHHHHHHHHHHHHHhc
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL-------NPVVEDAISFFDSFRARH 128 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-------~~~~~d~~~~l~~~~~~~ 128 (308)
++.|+||++||++++.. .+..+++.|+++||.|+++|+||+|.+...... ..+ ....+|+.++++++....
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999999988876 567899999999999999999999976432111 111 123466777777776543
Q ss_pred C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccc
Q 035721 129 A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207 (308)
Q Consensus 129 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (308)
. +.++++++|||+||.+++.++.++|+....++++++... ..... ...+.. . ....
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~-----~--~~~~-- 159 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----------TSLAR---TLFPPL-----I--PETA-- 159 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----------HHHHH---Hhcccc-----c--cccc--
Confidence 2 567999999999999999999988863333444433110 00000 000000 0 0000
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCC----CCc
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASK----DKT 282 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 282 (308)
..... .......... .+....+.++ ++|+|+++|++|.+++++.++.+.+.++.. +++
T Consensus 160 ~~~~~----------------~~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~ 222 (249)
T PRK10566 160 AQQAE----------------FNNIVAPLAE-WEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLT 222 (249)
T ss_pred ccHHH----------------HHHHHHHHhh-cChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceE
Confidence 00000 0000000000 1122334555 689999999999999999999999988542 367
Q ss_pred EEEecCCccccc
Q 035721 283 LSIYPGMWHQLI 294 (308)
Q Consensus 283 ~~~~~~~gH~~~ 294 (308)
++.++++||.+.
T Consensus 223 ~~~~~~~~H~~~ 234 (249)
T PRK10566 223 CLWEPGVRHRIT 234 (249)
T ss_pred EEecCCCCCccC
Confidence 888999999876
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=169.18 Aligned_cols=256 Identities=13% Similarity=0.012 Sum_probs=149.7
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCccchH----HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH-HHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGESSWI----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE-DAIS 119 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-d~~~ 119 (308)
....+.+......+++||++||+..+...+ ++.+++.|.++||+|+++|++|+|.|+.. .++++++. ++.+
T Consensus 49 ~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~ 124 (350)
T TIGR01836 49 VLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDK 124 (350)
T ss_pred EEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHH
Confidence 333455543323456799999975443211 35799999999999999999999976532 36677764 4788
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---hHHHhhh--hCCCcc
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH---LLFTVAW--LVPTWR 194 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~ 194 (308)
+++.+.... +..+++++||||||.+++.++..+|++++++|+++++..+............ ....... .++...
T Consensus 125 ~v~~l~~~~-~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 203 (350)
T TIGR01836 125 CVDYICRTS-KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGEL 203 (350)
T ss_pred HHHHHHHHh-CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHH
Confidence 888887654 5568999999999999999999999999999999988765432110000000 0000000 000000
Q ss_pred -------cccCCCCCCC------cccccHHHHHHHhh--CCCCCCCcchHHHHHHHHHHH---HH----------hhhhc
Q 035721 195 -------VVPTRGSLPM------VSFKEEWKRKLALS--SPRRPVARPRAATALELLRVS---RD----------LQGRF 246 (308)
Q Consensus 195 -------~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~ 246 (308)
..+.. .... ....++.....+.. ...............++.... .. ....+
T Consensus 204 ~~~~f~~l~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l 282 (350)
T TIGR01836 204 LNLTFLMLKPFS-LGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDL 282 (350)
T ss_pred HHHHHHhcCcch-hhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccH
Confidence 00000 0000 00011111100000 000000011111222222111 00 01235
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
.++++|+++++|++|.++|++.++.+.+.+++.+.++++++ +||... .++ +++...+.++
T Consensus 283 ~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~w 346 (350)
T TIGR01836 283 KNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKW 346 (350)
T ss_pred HhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHH
Confidence 67899999999999999999999999999865567788887 789887 443 5666666654
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-23 Score=149.94 Aligned_cols=213 Identities=18% Similarity=0.179 Sum_probs=155.2
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
.+.....+..|..+....+.+... ..+++++.||...+.... ..+...|.. -+++|+.+|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~--~~~~lly~hGNa~Dlgq~-~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE--- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEA--AHPTLLYSHGNAADLGQM-VELFKELSIFLNCNVVSYDYSGYGRSSGKPSE--- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCccc--cceEEEEcCCcccchHHH-HHHHHHHhhcccceEEEEecccccccCCCccc---
Confidence 344556677777776666666543 468999999996665523 234444444 2699999999999999987643
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
....+|+.++.++++...++.++++++|+|+|+..++.+|.+.| ++++||.+|.........+
T Consensus 109 -~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~-------------- 171 (258)
T KOG1552|consen 109 -RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFP-------------- 171 (258)
T ss_pred -ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhcc--------------
Confidence 35678999999999988534689999999999999999999998 9999999996542211100
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
..... ..-+ . ....+..+.+++|+|++||++|.+++....
T Consensus 172 --~~~~~---------~~~d-----~------------------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg 211 (258)
T KOG1552|consen 172 --DTKTT---------YCFD-----A------------------------FPNIEKISKITCPVLIIHGTDDEVVDFSHG 211 (258)
T ss_pred --CcceE---------Eeec-----c------------------------ccccCcceeccCCEEEEecccCceeccccc
Confidence 00000 0000 0 111355678899999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 270 EELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
.++++.++. ..+..++.|+||.-.+...++.+.+.++
T Consensus 212 ~~Lye~~k~-~~epl~v~g~gH~~~~~~~~yi~~l~~f 248 (258)
T KOG1552|consen 212 KALYERCKE-KVEPLWVKGAGHNDIELYPEYIEHLRRF 248 (258)
T ss_pred HHHHHhccc-cCCCcEEecCCCcccccCHHHHHHHHHH
Confidence 999999964 3688999999999886555566665543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=143.61 Aligned_cols=145 Identities=30% Similarity=0.449 Sum_probs=115.8
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
+||++||++++.. .+..+++.|+++||.|+.+|+|++|.+.. ..++.++++.+.....+..+++++||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDG-----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHH-----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccch-----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 5899999999876 56899999999999999999999998722 12445555544221115679999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhC
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSS 219 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (308)
|+||.+++.++.+. .+++++|++++...
T Consensus 69 S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~--------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PRVKAVVLLSPYPD--------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-TTESEEEEESESSG---------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-cceeEEEEecCccc---------------------------------------------------
Confidence 99999999999988 68999999998200
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccc
Q 035721 220 PRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQ 292 (308)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 292 (308)
.+.+.+.++|+++++|++|..++++..+.+++.++ .+.+++++++++|+
T Consensus 97 -----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 13345667799999999999999999999999996 46899999999995
|
... |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-22 Score=140.57 Aligned_cols=234 Identities=20% Similarity=0.273 Sum_probs=149.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
.+....+.++....... .+..++|++||+-++.. .+...++..|.+.|+.++.+|++|.|+|.+.-.+ ......
T Consensus 14 vi~n~~ne~lvg~lh~t----gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~e 88 (269)
T KOG4667|consen 14 VIPNSRNEKLVGLLHET----GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTE 88 (269)
T ss_pred EeccCCCchhhcceecc----CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccccch
Confidence 34444454544433222 23678999999988765 3456789999999999999999999999886554 255666
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++|+..+++++... ...--+++|||-||.+++.++.++++ ++-+|.+++......... .+.....+.++..- ..+
T Consensus 89 adDL~sV~q~~s~~--nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-eRlg~~~l~~ike~-Gfi 163 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNS--NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-ERLGEDYLERIKEQ-GFI 163 (269)
T ss_pred HHHHHHHHHHhccC--ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-hhhcccHHHHHHhC-Cce
Confidence 79999999999865 22233589999999999999999987 888888877544321110 00111111111100 000
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC--CcceEEEeeCCCcccChHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV--EVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
...+....+.. ....... +.+...++.+...+| +||||-++|..|.++|.+.+.+
T Consensus 164 d~~~rkG~y~~---------------------rvt~eSl--mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake 220 (269)
T KOG4667|consen 164 DVGPRKGKYGY---------------------RVTEESL--MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE 220 (269)
T ss_pred ecCcccCCcCc---------------------eecHHHH--HHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH
Confidence 00000000000 0001111 111113444444445 8999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCcccccCCchhhHHH
Q 035721 272 LYKRAASKDKTLSIYPGMWHQLIGEPEENVEL 303 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 303 (308)
+++.+ ++.++.++||+.|....+..+....
T Consensus 221 fAk~i--~nH~L~iIEgADHnyt~~q~~l~~l 250 (269)
T KOG4667|consen 221 FAKII--PNHKLEIIEGADHNYTGHQSQLVSL 250 (269)
T ss_pred HHHhc--cCCceEEecCCCcCccchhhhHhhh
Confidence 99999 6789999999999998444434433
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-22 Score=149.57 Aligned_cols=263 Identities=16% Similarity=0.143 Sum_probs=161.0
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
..+.+....+.++||..+-..+..++.. ..+|.||++||+.|++. .|.+.+.+.+.++||.|+++++|||+.+.....
T Consensus 45 ~~~~~~re~v~~pdg~~~~ldw~~~p~~-~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 45 PKVAYTRERLETPDGGFIDLDWSEDPRA-AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred cccccceEEEEcCCCCEEEEeeccCccc-cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4566677788999998877766665433 56789999999987764 577899999999999999999999999876433
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCCcC---CCCCch--
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQK---FKPPWP-- 178 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~---~~~~~~-- 178 (308)
..+. ..+.+|+..++++++... .+.++..+|.|+||.+...+..+..+ .+.+.+.++.+..+... ....+.
T Consensus 124 ~~yh-~G~t~D~~~~l~~l~~~~-~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 124 RLYH-SGETEDIRFFLDWLKARF-PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLR 201 (345)
T ss_pred ceec-ccchhHHHHHHHHHHHhC-CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhh
Confidence 3322 333599999999998865 78899999999999655555544332 34555555544332110 011111
Q ss_pred --hhhhHHHhhhhCCCcccccCCCCCCCcc-cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 179 --LEHLLFTVAWLVPTWRVVPTRGSLPMVS-FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
...+...+.+........... ...... ..-........-+.........+....++++. ....+.+++|.+|+++
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~-~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~-aSs~~~L~~Ir~PtLi 279 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEP-SLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ-ASSLPLLPKIRKPTLI 279 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCc-ccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh-ccccccccccccceEE
Confidence 111111111111110000000 000000 00000011111122222222334444455544 3345778999999999
Q ss_pred EeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C
Q 035721 256 CHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G 295 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 295 (308)
|++.+|++++++..-...... ++++.+..-+.+||.-+ .
T Consensus 280 i~A~DDP~~~~~~iP~~~~~~-np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEML-NPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred EecCCCCCCChhhCCcchhcC-CCceEEEeecCCceEEecc
Confidence 999999999987766655533 37899999999999988 5
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-24 Score=166.14 Aligned_cols=210 Identities=19% Similarity=0.211 Sum_probs=129.7
Q ss_pred CeEEEecCCCCcCCCC---ccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 87 FATCAIDHQGHGFSDG---LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 87 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
|+|+++|+||+|.|++ .....++.+++++++..+++.++.+ +++++||||||.+++.++.++|++|+++|++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-----KINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-----SEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-----CeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 6899999999999996 4445568888999999999988877 8999999999999999999999999999999
Q ss_pred CCcC----CCCcCCCCC-chhhhhHHHhhh-hCCCcccccCCCCCC--CcccccH----HHHHHHhhCCCCCCCcchHHH
Q 035721 164 GAMC----GISQKFKPP-WPLEHLLFTVAW-LVPTWRVVPTRGSLP--MVSFKEE----WKRKLALSSPRRPVARPRAAT 231 (308)
Q Consensus 164 ~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (308)
++.. ......... ............ ......... . ... ....... .....................
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLL-G-RWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhh-h-hhhhheeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 9852 100000000 000000000000 000000000 0 000 0000000 000000000000000000000
Q ss_pred H---HHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 232 A---LELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 232 ~---~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
. ........+....+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||+.+ ++|+++.+.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0 01111123445667889999999999999999999999988888 6799999999999999 99999988775
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-21 Score=159.16 Aligned_cols=247 Identities=11% Similarity=0.028 Sum_probs=145.6
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH-H
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE-D 116 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-d 116 (308)
.+....|.|......+++||++||+..... .+ +.+++.|.++||+|+++|++|+|.+.... ++++++. +
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~ 247 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDG 247 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHH
Confidence 455555666654345789999999875543 33 37999999999999999999999885532 3445553 4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHH----HHHHhc-CCCccEEEEeCCcCCCCcCCCCCchh-hhhHHHhhhh-
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIAL----YITLRQ-KGAWDGLILNGAMCGISQKFKPPWPL-EHLLFTVAWL- 189 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 189 (308)
+.+.++.+.... +..+++++|||+||.++. .++... +++|++++++++...+........+. ......+...
T Consensus 248 i~~al~~v~~~~-g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 248 VIAALEVVEAIT-GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHHHHhc-CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 666666665432 455899999999999852 345555 78899999999987765422111110 0011111111
Q ss_pred -----CCCcccccCCCCCCC--cccccHHHHHHHhhCCC-------CC---CCcchHHHHHHHHHHH---H---------
Q 035721 190 -----VPTWRVVPTRGSLPM--VSFKEEWKRKLALSSPR-------RP---VARPRAATALELLRVS---R--------- 240 (308)
Q Consensus 190 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~---~--------- 240 (308)
++........ .+.+ ....+.... .+..... .+ ..........++++.. .
T Consensus 327 ~~~G~lpg~~m~~~F-~~lrp~~l~w~~~v~-~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v 404 (532)
T TIGR01838 327 GGGGYLDGRQMAVTF-SLLRENDLIWNYYVD-NYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEV 404 (532)
T ss_pred HhcCCCCHHHHHHHH-HhcChhhHHHHHHHH-HHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEE
Confidence 1110000000 0000 000000000 0111000 00 0111222222222111 0
Q ss_pred -HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 241 -DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 241 -~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
+....+.+|++|+++++|++|.++|++.+..+.+.+ ++.+.++++++||..+ ++|..
T Consensus 405 ~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 405 CGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCCC
Confidence 112357789999999999999999999999998888 4678889999999999 87753
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=150.94 Aligned_cols=264 Identities=17% Similarity=0.147 Sum_probs=165.8
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCC-----CCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcC
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPP-----AKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
...+.++...+++.||..+.+.+..+... ....|+||++||+.+++. .+.+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 34667888999999999999988755443 135799999999987764 577888999999999999999999999
Q ss_pred CCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCcCCC--CcCCC
Q 035721 100 SDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLILNGAMCGI--SQKFK 174 (308)
Q Consensus 100 s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~--~~~~~ 174 (308)
+.-.....++ ..+.+|+.+++++++.++ +..++..+|.||||++.+.|..+..+ .+.++++++|+-.+ .....
T Consensus 168 ~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~-P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 168 SKLTTPRLFT-AGWTEDLREVVNHIKKRY-PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CccCCCceee-cCCHHHHHHHHHHHHHhC-CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHh
Confidence 8765444333 345799999999999988 77899999999999999999987654 35666666665432 11111
Q ss_pred CCchhhhhHHH----hhhhCCCccc-ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC
Q 035721 175 PPWPLEHLLFT----VAWLVPTWRV-VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV 249 (308)
Q Consensus 175 ~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 249 (308)
........... +.......+. ............+....++..........+... ..++++. ......+.+|
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~-aSs~~~v~~I 321 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKK-ASSSNYVDKI 321 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhh-cchhhhcccc
Confidence 11001111111 1111111110 000000011111111122221111111222222 2223332 2345668899
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CC
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 296 (308)
++|+++|++.+|+++|.+. ....+...++++-+++-..+||.-+ +.
T Consensus 322 ~VP~L~ina~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 322 KVPLLCINAADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccEEEEecCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 9999999999999998753 3333333447888888889999988 55
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.9e-22 Score=143.78 Aligned_cols=183 Identities=15% Similarity=0.071 Sum_probs=116.8
Q ss_pred ceEEEEccCCCccchHH-HHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 59 GVLCVVHGFTGESSWIV-QLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~-~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
|+||++||++++...+. ..+.+.+.+. +|+|+++|+||++ ++.++++.++++.+..+ +++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-----~~~ 64 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-----PLG 64 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-----CeE
Confidence 57999999999887332 2355666553 6999999999985 24567777777765554 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++|||+||.+++.+|.++|. .+|+++|..... . .+......... . ..........
T Consensus 65 lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~---------~----~~~~~~~~~~~-~---~~~~~~~~~~----- 119 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFML---PAVVVNPAVRPF---------E----LLTDYLGENEN-P---YTGQQYVLES----- 119 (190)
T ss_pred EEEECHHHHHHHHHHHHcCC---CEEEECCCCCHH---------H----HHHHhcCCccc-c---cCCCcEEEcH-----
Confidence 99999999999999999983 467888854311 0 11111110000 0 0000000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccC
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 295 (308)
....+... .+. ..+. ..+|+++++|++|.++|++.+.++++. ++.++++|++|.+..
T Consensus 120 --------------~~~~d~~~--~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f~~ 176 (190)
T PRK11071 120 --------------RHIYDLKV--MQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAFVG 176 (190)
T ss_pred --------------HHHHHHHh--cCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcchhh
Confidence 00000000 011 1133 677889999999999999999999885 356788999999862
Q ss_pred CchhhHHHhhhc
Q 035721 296 EPEENVELVFGE 307 (308)
Q Consensus 296 ~~~~~~~~i~~~ 307 (308)
. ++..+.+.++
T Consensus 177 ~-~~~~~~i~~f 187 (190)
T PRK11071 177 F-ERYFNQIVDF 187 (190)
T ss_pred H-HHhHHHHHHH
Confidence 2 6667776664
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=171.17 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=157.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCc--ceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc-
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTL--GVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL- 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~--~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 103 (308)
-...+...+...||.+|++..+.|.+..+.+ |+||++||.+.... +.+....+.|+.+||.|+.+++||.+.-...
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 3456778889999999999999997764333 89999999874433 2345678889999999999999976542211
Q ss_pred --cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 104 --VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 104 --~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.....--....+|+.+.++.+..... +.+++.|.|+|+||++++..+...| ++++.+...+...........
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~---- 516 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGES---- 516 (620)
T ss_pred HHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcccc----
Confidence 11101223346788888886655433 7789999999999999999999988 677777666643311100000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
...+. .........+. . ....+.. ........++++|+|+|||++
T Consensus 517 ---------~~~~~------~~~~~~~~~~~----------~---------~~~~~~~-~sp~~~~~~i~~P~LliHG~~ 561 (620)
T COG1506 517 ---------TEGLR------FDPEENGGGPP----------E---------DREKYED-RSPIFYADNIKTPLLLIHGEE 561 (620)
T ss_pred ---------chhhc------CCHHHhCCCcc----------c---------ChHHHHh-cChhhhhcccCCCEEEEeecC
Confidence 00000 00000000000 0 0000000 122244678999999999999
Q ss_pred CcccChHHHHHHHHHhc--CCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 261 DVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
|..|+.+++.++.+.+. +.+++++++|+.||.+. ++.....+.++++
T Consensus 562 D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~ 612 (620)
T COG1506 562 DDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDW 612 (620)
T ss_pred CccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHH
Confidence 99999999999999986 35689999999999988 4444455555544
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=144.06 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=138.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
+..|.++++||++.+.- .|..++..|..+ ..+|+++|+||||++........+.+.+++|+.++++.+-.+ ...++
T Consensus 72 t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge--~~~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE--LPPQI 148 (343)
T ss_pred CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc--CCCce
Confidence 56899999999887665 667888888765 567889999999999887776679999999999999988765 66789
Q ss_pred EEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCCCCcCC---------CCCchhhhhHHHhhhhCCCcccccCCCCCC
Q 035721 135 FLYSESLGGAIALYITLR--QKGAWDGLILNGAMCGISQKF---------KPPWPLEHLLFTVAWLVPTWRVVPTRGSLP 203 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (308)
++|||||||.||.+.|.. -|. +.|+++++-.-+..-.. ..+.........+.+........ ...
T Consensus 149 ilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~R----n~~ 223 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLR----NRD 223 (343)
T ss_pred EEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccc----ccc
Confidence 999999999999887764 354 88999887643211000 00000000000111100000000 000
Q ss_pred CcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCc
Q 035721 204 MVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKT 282 (308)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 282 (308)
.....-+....... .-..+.....+.....+...+ ..+...+-...+|-++|....|..-.--..-+ .+ -..+
T Consensus 224 SArVsmP~~~~~~~-eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLtiGQ----MQ-Gk~Q 297 (343)
T KOG2564|consen 224 SARVSMPSQLKQCE-EGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLTIGQ----MQ-GKFQ 297 (343)
T ss_pred cceEecchheeecc-CCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcceeeee----ec-ccee
Confidence 00000000000000 000111111222222222221 22334455678898888888776432111111 12 2468
Q ss_pred EEEecCCccccc-CCchhhHHHhhhc
Q 035721 283 LSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 283 ~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.+++.+||+.+ +.|..++..+..+
T Consensus 298 ~~vL~~~GH~v~ED~P~kva~~~~~f 323 (343)
T KOG2564|consen 298 LQVLPLCGHFVHEDSPHKVAECLCVF 323 (343)
T ss_pred eeeecccCceeccCCcchHHHHHHHH
Confidence 999999999999 8898888877643
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=148.86 Aligned_cols=129 Identities=24% Similarity=0.313 Sum_probs=103.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
++....| .+....+.|.+. .++++||++||++++.. ..|..+++.|+++||.|+++|+||||.|.+.... .+++
T Consensus 4 ~l~~~~g-~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~ 80 (266)
T TIGR03101 4 FLDAPHG-FRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWD 80 (266)
T ss_pred EecCCCC-cEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHH
Confidence 4555555 455555655543 45789999999986432 3567789999999999999999999999765443 4677
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+++|+..+++.+... +..+++++||||||.+++.++.++|++++++|+++|...
T Consensus 81 ~~~~Dv~~ai~~L~~~--~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQ--GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHHHhc--CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 8899999999888765 556999999999999999999999999999999998644
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-21 Score=142.91 Aligned_cols=176 Identities=17% Similarity=0.130 Sum_probs=120.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc----------cCC---CcchHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA----------HIP---DLNPVVEDAISFFD 122 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----------~~~---~~~~~~~d~~~~l~ 122 (308)
+++++||++||++++.. .|..+++.|...++.+..++.+|...+..... ... ++.+..+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999987 56789999987766666666666533211100 000 11222334444555
Q ss_pred HHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCC
Q 035721 123 SFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS 201 (308)
Q Consensus 123 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
.+..+.+ +..+++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-------------------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-------------------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------------
Confidence 5544433 5568999999999999999999999878888876652110
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--C
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--K 279 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~ 279 (308)
.. .......|+++++|++|+++|.+.++++.+.+.. .
T Consensus 141 ~~-----------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 141 LP-----------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred cc-----------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00 0011357999999999999999999999888853 3
Q ss_pred CCcEEEecCCccccc-CCchhhHHHhh
Q 035721 280 DKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 280 ~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
++++++++++||.+. +.-+...+.+.
T Consensus 180 ~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 180 DVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 568899999999998 65555554443
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-21 Score=143.55 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=123.8
Q ss_pred HHHHHHHHHcCCeEEEecCCCCcCCCCcccc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHH
Q 035721 76 QLTAVLFAKSGFATCAIDHQGHGFSDGLVAH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
......|+++||.|+.+|+||.+........ ...-...++|+.++++++..... +..++.++|+|+||.+++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 3456788899999999999998754332111 11223457899999999987755 7789999999999999999999
Q ss_pred hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHH
Q 035721 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAAT 231 (308)
Q Consensus 152 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
++|++++++|..++............. + ............. .
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~----------------------------~----~~~~~~~~~~~~~---~--- 125 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDI----------------------------Y----TKAEYLEYGDPWD---N--- 125 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCC----------------------------H----HHGHHHHHSSTTT---S---
T ss_pred ccceeeeeeeccceecchhcccccccc----------------------------c----ccccccccCccch---h---
Confidence 999999999999987654322110000 0 0000000000000 0
Q ss_pred HHHHHHHHHHhhhhcCC--CCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc--CCchhhHHHhh
Q 035721 232 ALELLRVSRDLQGRFEE--VEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI--GEPEENVELVF 305 (308)
Q Consensus 232 ~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~--~~~~~~~~~i~ 305 (308)
...+.. ......+.+ +++|+|+++|++|..||++.+..+++.+.. .+++++++|++||.+. +......+.++
T Consensus 126 -~~~~~~-~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~ 203 (213)
T PF00326_consen 126 -PEFYRE-LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERIL 203 (213)
T ss_dssp -HHHHHH-HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHH
T ss_pred -hhhhhh-hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHH
Confidence 000111 111233444 789999999999999999999999988853 3589999999999665 44444555555
Q ss_pred hc
Q 035721 306 GE 307 (308)
Q Consensus 306 ~~ 307 (308)
++
T Consensus 204 ~f 205 (213)
T PF00326_consen 204 DF 205 (213)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-19 Score=163.08 Aligned_cols=122 Identities=13% Similarity=0.124 Sum_probs=85.3
Q ss_pred EEEEEEecCCCC----CCCcceEEEEccCCCccchHHHH-----HHHHHHHcCCeEEEecCCCCcCCCCcccc-CCCcch
Q 035721 43 RLFTQWWTPLPP----AKTLGVLCVVHGFTGESSWIVQL-----TAVLFAKSGFATCAIDHQGHGFSDGLVAH-IPDLNP 112 (308)
Q Consensus 43 ~l~~~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~ 112 (308)
.+..+.|.|... ...+++|||+||+..+.. .|+. +.+.|.++||+|+++|+ |.++.+... ..++.+
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 344445555432 134689999999987776 5554 47899999999999994 566554332 235555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGIS 170 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~ 170 (308)
++..+.+.++.+... ...+++++||||||.+++.++..+ +++|+++|++++...+.
T Consensus 124 ~i~~l~~~l~~v~~~--~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~ 180 (994)
T PRK07868 124 HVVALSEAIDTVKDV--TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTL 180 (994)
T ss_pred HHHHHHHHHHHHHHh--hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccC
Confidence 555555555554433 334899999999999999988755 56899999988876543
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.5e-19 Score=128.98 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=152.8
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+..+||-+||.+|+.. .++.+.+.|.+.|.+++.+++||+|.+++.....++-.+...-+.++++.+.... +++
T Consensus 33 s~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~----~~i 107 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKG----KLI 107 (297)
T ss_pred CCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCC----ceE
Confidence 34679999999999887 5689999999999999999999999999988877888888999999999998875 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++|||.||-.|+.++..+| ..++++++|..........+........++...++... .+......
T Consensus 108 ~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~-------------~~~i~~~~ 172 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFI-------------INAIMYFY 172 (297)
T ss_pred EEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHH-------------HHHHHHHH
Confidence 9999999999999999996 67999999875544333332222222223222222210 00000001
Q ss_pred HhhCCCCC-CCcchHHHHHHHHH----HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC------------
Q 035721 216 ALSSPRRP-VARPRAATALELLR----VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS------------ 278 (308)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------ 278 (308)
+...-... ...........+.. ......+.+.+-++|+++++|.+|.++..+...+++....+
T Consensus 173 y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~se 252 (297)
T PF06342_consen 173 YRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISE 252 (297)
T ss_pred HHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCCh
Confidence 10000000 01111111111111 11233455666679999999999999887766666544321
Q ss_pred -------------CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 279 -------------KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 279 -------------~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
.....+.+.+.||+.+ .+++-+++.+..
T Consensus 253 ee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~ 294 (297)
T PF06342_consen 253 EEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKK 294 (297)
T ss_pred hHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHH
Confidence 1223456777899999 888877776654
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=140.88 Aligned_cols=249 Identities=26% Similarity=0.289 Sum_probs=139.1
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
.+..+.|...+.. .|+++++||++++...+ ......+... .|+++++|+||||.|. .. .+.....++++
T Consensus 8 ~~~~~~~~~~~~~-----~~~i~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~ 78 (282)
T COG0596 8 DGVRLAYREAGGG-----GPPLVLLHGFPGSSSVW-RPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDL 78 (282)
T ss_pred CCeEEEEeecCCC-----CCeEEEeCCCCCchhhh-HHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHH
Confidence 3445555554433 44899999999887733 3422333322 1899999999999997 11 12444448888
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC------chhhhhHHHhhhh-C
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP------WPLEHLLFTVAWL-V 190 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~ 190 (308)
..+++.++.. +++++|||+||.+++.++.++|++++++|++++........... ............. .
T Consensus 79 ~~~~~~~~~~-----~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T COG0596 79 AALLDALGLE-----KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDA 153 (282)
T ss_pred HHHHHHhCCC-----ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccch
Confidence 8888877765 79999999999999999999999999999999865411110000 0000000000000 0
Q ss_pred C----CcccccCCCCCCC-------cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC
Q 035721 191 P----TWRVVPTRGSLPM-------VSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG 259 (308)
Q Consensus 191 ~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 259 (308)
. ............. ....... ......................... ........++++|+++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 154 AAFAALLAALGLLAALAAAARAGLAEALRAPL-LGAAAAAFARAARADLAAALLALLD--RDLRAALARITVPTLIIHGE 230 (282)
T ss_pred hhhhhhhhcccccccccccchhcccccccccc-chhHhhhhhhhcccccchhhhcccc--cccchhhccCCCCeEEEecC
Confidence 0 0000000000000 0000000 0000000000000000000000000 01223456778999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 260 DDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
+|.+.+......+.+.++. ..++.+++++||+++ ++|+.+.+.+.+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 9977766655666666632 489999999999999 999988877764
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-19 Score=133.39 Aligned_cols=121 Identities=15% Similarity=0.120 Sum_probs=87.3
Q ss_pred EEecCCCCCCCcceEEEEccCCCccchHH--HHHHHHHHHcCCeEEEecCCCCcCCCCccccC-----CCcchHHHHHHH
Q 035721 47 QWWTPLPPAKTLGVLCVVHGFTGESSWIV--QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI-----PDLNPVVEDAIS 119 (308)
Q Consensus 47 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~~ 119 (308)
.+|.|++.+.+.|+||++||.+++...+. ..+.+.+.+.||.|+++|++|++.+....... ........++..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 34556554456899999999987765331 12455555679999999999987543211100 011234677888
Q ss_pred HHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 120 FFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 120 ~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++.+..+.. +.++++|+|||+||.+++.++.++|+++.+++.+++..
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 8888877654 66799999999999999999999999999998888754
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=134.70 Aligned_cols=176 Identities=20% Similarity=0.173 Sum_probs=121.1
Q ss_pred EEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC-CCC-ccccCC--------CcchHHH
Q 035721 46 TQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF-SDG-LVAHIP--------DLNPVVE 115 (308)
Q Consensus 46 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~-~~~~~~--------~~~~~~~ 115 (308)
.++..|.+. .+.|.||++|+..|-.. ..+.+++.|+++||.|+++|+.+-.. ... ...... ..+...+
T Consensus 3 ay~~~P~~~-~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 3 AYVARPEGG-GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEETTS-SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred EEEEeCCCC-CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 445667665 57899999999987665 55789999999999999999865444 111 110000 1234567
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 116 DAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 116 d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
++.+.++.+..... +..++.++|+|+||.+++.++.+. +.++++|..-|....
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------- 134 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------- 134 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------
Confidence 88888888887632 457999999999999999999887 579999977661000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
........++++|+++++|++|+.++.+..+.+.+
T Consensus 135 ---------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 135 ---------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp ---------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred ---------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 01123356788999999999999999998888888
Q ss_pred Hhc--CCCCcEEEecCCccccc
Q 035721 275 RAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 275 ~~~--~~~~~~~~~~~~gH~~~ 294 (308)
.+. +...++++|+|++|.+.
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTT
T ss_pred HHHhcCCcEEEEECCCCccccc
Confidence 883 35689999999999998
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-18 Score=134.51 Aligned_cols=212 Identities=18% Similarity=0.220 Sum_probs=129.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHH--HHHHHHHHHcCCeEEEecCCCCcC-----CCC----cc-
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIV--QLTAVLFAKSGFATCAIDHQGHGF-----SDG----LV- 104 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~-----s~~----~~- 104 (308)
..-|..+.|.++.|+.. ..+.|+|+++||++++...+. ..+.+.+...|+.|+.+|..++|. +.. ..
T Consensus 26 ~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 26 STLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 34577899999988632 246799999999988765221 234566677799999999887662 110 00
Q ss_pred c-----cC-----CC-cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC
Q 035721 105 A-----HI-----PD-LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF 173 (308)
Q Consensus 105 ~-----~~-----~~-~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 173 (308)
. .. .. .....+++...++...... +..+++++||||||..|+.++.++|+++++++++++.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~- 183 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC- 183 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC-
Confidence 0 00 00 1113445555554432211 5568999999999999999999999999999999987543210
Q ss_pred CCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 174 KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
..... .+...+.. +.. .... ... ......+...++|+
T Consensus 184 --~~~~~----~~~~~~g~----------------~~~---~~~~-----------------~d~-~~~~~~~~~~~~pv 220 (283)
T PLN02442 184 --PWGQK----AFTNYLGS----------------DKA---DWEE-----------------YDA-TELVSKFNDVSATI 220 (283)
T ss_pred --chhhH----HHHHHcCC----------------Chh---hHHH-----------------cCh-hhhhhhccccCCCE
Confidence 00000 00000000 000 0000 000 11223345568999
Q ss_pred EEEeeCCCcccChH-HHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 254 LICHGGDDVVCDPA-CVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 254 l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
++++|++|.+++.. .++.+.+.+. +.+++++++++.+|...
T Consensus 221 li~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 221 LIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred EEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 99999999998863 3455555443 23589999999999876
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=120.23 Aligned_cols=194 Identities=25% Similarity=0.293 Sum_probs=138.9
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---Cccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
.+..+.-.-| ++..+.- +.+ .++.|+.|++|.-+ ++.. -..+.++..|.+.||.++.+|+||.|.|.+..+.
T Consensus 5 ~~v~i~Gp~G-~le~~~~-~~~-~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~- 80 (210)
T COG2945 5 PTVIINGPAG-RLEGRYE-PAK-TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN- 80 (210)
T ss_pred CcEEecCCcc-cceeccC-CCC-CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC-
Confidence 3445544445 4444332 222 25688999999753 2222 1235788899999999999999999999987654
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..-+ .+|..+++++++.+. +..+. .+.|+|+|++|+..+|.+.|+ ....+.+.|.....
T Consensus 81 -GiGE-~~Da~aaldW~~~~h-p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~---------------- 140 (210)
T COG2945 81 -GIGE-LEDAAAALDWLQARH-PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY---------------- 140 (210)
T ss_pred -Ccch-HHHHHHHHHHHHhhC-CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch----------------
Confidence 3333 689999999999885 33333 688999999999999999986 55555555533200
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
+ ...+....+|.++|+|+.|.+++.
T Consensus 141 ------------------------------------------------------d-fs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 ------------------------------------------------------D-FSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred ------------------------------------------------------h-hhhccCCCCCceeEecChhhhhcH
Confidence 0 022345678999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
....++++.. ..+++++++++|+++.+-..+.+.+.++
T Consensus 166 ~~~l~~~~~~---~~~~i~i~~a~HFF~gKl~~l~~~i~~~ 203 (210)
T COG2945 166 VAVLKWQESI---KITVITIPGADHFFHGKLIELRDTIADF 203 (210)
T ss_pred HHHHHhhcCC---CCceEEecCCCceecccHHHHHHHHHHH
Confidence 8887777663 5789999999999997777777777654
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=133.83 Aligned_cols=210 Identities=18% Similarity=0.184 Sum_probs=124.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchH-HHHHHHHH-HHcCCeEEEecC--CCCcCCCCccc-------
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWI-VQLTAVLF-AKSGFATCAIDH--QGHGFSDGLVA------- 105 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~-~~~~~~~l-~~~g~~v~~~d~--~G~G~s~~~~~------- 105 (308)
..-+.++.|.++.|+.. ..+.|+|+++||++++...+ +......+ .+.|+.|+++|. +|+|.+.....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 34567888999988642 24579999999999877623 12223344 456999999998 55553321100
Q ss_pred ------------cCCCcch-HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 106 ------------HIPDLNP-VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 106 ------------~~~~~~~-~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
..+...+ .++++..+++....- +..+++++||||||.+|+.++.++|+.+++++++++......
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~- 177 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPL--DGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSR- 177 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCC--CCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCccc-
Confidence 0011111 234444444432111 456899999999999999999999999999999998754321
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP 252 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 252 (308)
.... . ......+. .+...... ... ....... ....|
T Consensus 178 --~~~~-~---~~~~~~l~--------------------------~~~~~~~~-------~~~----~~~~~~~-~~~~p 213 (275)
T TIGR02821 178 --CPWG-Q---KAFSAYLG--------------------------ADEAAWRS-------YDA----SLLVADG-GRHST 213 (275)
T ss_pred --Ccch-H---HHHHHHhc--------------------------ccccchhh-------cch----HHHHhhc-ccCCC
Confidence 0000 0 00000000 00000000 000 0111111 24569
Q ss_pred eEEEeeCCCcccCh-HHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 253 MLICHGGDDVVCDP-ACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 253 ~l~i~g~~D~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
+++++|+.|..++. .....+.+.+.. ..+++.++||++|.+.
T Consensus 214 lli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 214 ILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYY 258 (275)
T ss_pred eeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccch
Confidence 99999999999998 455566655542 3478999999999887
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-19 Score=137.24 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=123.3
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
..+.+.++.|... ...|+|||+||++.+.. +|..+++.|+++||.|+++|++|++.+... ..+ ++..+++
T Consensus 37 ~~~p~~v~~P~~~-g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~----~~i----~d~~~~~ 106 (313)
T PLN00021 37 PPKPLLVATPSEA-GTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGT----DEI----KDAAAVI 106 (313)
T ss_pred CCceEEEEeCCCC-CCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCch----hhH----HHHHHHH
Confidence 4566777878654 55799999999998876 568899999999999999999986533211 112 2233333
Q ss_pred HHHHHh--------cC-CCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 122 DSFRAR--------HA-PDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 122 ~~~~~~--------~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
+++... .. +..+++++|||+||.+|+.++.++++ +++++|+++|..........
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~------------ 174 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT------------ 174 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC------------
Confidence 333221 00 34689999999999999999998874 68999999986543210000
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCc-----
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDV----- 262 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~----- 262 (308)
.... ........++.+|++++.+..|.
T Consensus 175 ---------------~p~i---------------------------------l~~~~~s~~~~~P~liig~g~~~~~~~~ 206 (313)
T PLN00021 175 ---------------PPPV---------------------------------LTYAPHSFNLDIPVLVIGTGLGGEPRNP 206 (313)
T ss_pred ---------------CCcc---------------------------------cccCcccccCCCCeEEEecCCCcccccc
Confidence 0000 00011123478999999998763
Q ss_pred c----cChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCc
Q 035721 263 V----CDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 263 ~----~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~ 297 (308)
. .|.. ...++++.++ +.+...+++++||+-+ ++.
T Consensus 207 ~~p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 207 LFPPCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred cccccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCC
Confidence 2 2233 3477888876 4688899999999988 544
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=135.68 Aligned_cols=232 Identities=22% Similarity=0.223 Sum_probs=139.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc---
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV--- 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--- 104 (308)
++......+...+|..|+...+.|.....+.|+||.+||.++....+. ... .++..||.|+.+|.||+|......
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~-~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPF-DLL-PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHH-HHH-HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcc-ccc-ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 455567788889999999999999854467899999999998865332 332 467889999999999999322110
Q ss_pred ------cc----CCC------cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 105 ------AH----IPD------LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 105 ------~~----~~~------~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+ ..+ +..+..|...+++.+..... +..++.+.|.|+||.+++.+|+..+ +|++++...|..
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 00 001 12245688888888887655 7789999999999999999999886 699999988854
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh-hCCCCCCCcchHHHHHHHHHHHHHhhhhc
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL-SSPRRPVARPRAATALELLRVSRDLQGRF 246 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
.-.. ........ ...+ ........ .+.. ........+.+.. .|.....
T Consensus 210 ~d~~---------~~~~~~~~---------------~~~y--~~~~~~~~~~d~~----~~~~~~v~~~L~Y-~D~~nfA 258 (320)
T PF05448_consen 210 CDFR---------RALELRAD---------------EGPY--PEIRRYFRWRDPH----HEREPEVFETLSY-FDAVNFA 258 (320)
T ss_dssp SSHH---------HHHHHT-----------------STTT--HHHHHHHHHHSCT----HCHHHHHHHHHHT-T-HHHHG
T ss_pred cchh---------hhhhcCCc---------------cccH--HHHHHHHhccCCC----cccHHHHHHHHhh-hhHHHHH
Confidence 3210 00000000 0000 00000000 0000 0011111111111 4556677
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+.|++|+++..|-.|.+|||......++.+++ .+++.+++..||...
T Consensus 259 ~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~ 305 (320)
T PF05448_consen 259 RRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYG 305 (320)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTT
T ss_pred HHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCch
Confidence 88999999999999999999999999999975 589999999999877
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-19 Score=148.82 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=105.9
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
.+.||.+|++.++.|... .+.|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.+..... + ...
T Consensus 2 ~~~DG~~L~~~~~~P~~~-~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG-GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCCC-CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-ccc
Confidence 467899999999988653 46899999999987642 11123456788899999999999999999865432 3 567
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
++|+.++++++..+.....+++++|+|+||.+++.+|..+|++++++|..++.....
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 899999999998764334699999999999999999999999999999988876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=126.23 Aligned_cols=220 Identities=15% Similarity=0.111 Sum_probs=140.4
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH-HHHhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS-FRARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-~~~~~~~~~~~~ 135 (308)
.+..++++|-.|+++. .++.+...|... +.++++++||+|..-..+.. .+++.+++.+...+.. . ...++.
T Consensus 6 ~~~~L~cfP~AGGsa~-~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~-----~d~P~a 77 (244)
T COG3208 6 ARLRLFCFPHAGGSAS-LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL-----LDAPFA 77 (244)
T ss_pred CCceEEEecCCCCCHH-HHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc-----CCCCee
Confidence 4677889988888887 558888888664 99999999999987554433 3777777777776663 2 334999
Q ss_pred EEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH
Q 035721 136 LYSESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
++||||||++|.++|.+.. ....++.+.+......... ........++..+..+- ......+.++
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lg----------G~p~e~led~ 147 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLG----------GTPPELLEDP 147 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhC----------CCChHHhcCH
Confidence 9999999999999998753 2366677666543311110 11111111222222111 1122233333
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
+...... +.++........ ..+.. -..+.||+.++.|++|..+..+....+.+..+ ...++.+++ +|
T Consensus 148 El~~l~L---------PilRAD~~~~e~-Y~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fd-Gg 214 (244)
T COG3208 148 ELMALFL---------PILRADFRALES-YRYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFD-GG 214 (244)
T ss_pred HHHHHHH---------HHHHHHHHHhcc-cccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEec-Cc
Confidence 3322211 111111111111 11111 24689999999999999999999999998885 378999999 88
Q ss_pred cccc-CCchhhHHHhhhc
Q 035721 291 HQLI-GEPEENVELVFGE 307 (308)
Q Consensus 291 H~~~-~~~~~~~~~i~~~ 307 (308)
|++. ++.+++...+.+.
T Consensus 215 HFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 215 HFFLNQQREEVLARLEQH 232 (244)
T ss_pred ceehhhhHHHHHHHHHHH
Confidence 9999 8888888877654
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=137.13 Aligned_cols=228 Identities=17% Similarity=0.099 Sum_probs=129.1
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+.+.++..+...+ .+|....+.|... .+.|+||++.|+.+....++..+.+.|.++|+.++++|.||.|.|...+-.
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~~-~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~- 238 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSGE-KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT- 238 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSSS-S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCCC-CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-
Confidence 4445666665554 7888888888744 678999999998887765666667789999999999999999998653322
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+.+.. ..++++++..... +..+|.++|.|+||++|.++|..+++|++++|..++.....- .............
T Consensus 239 ~D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f--t~~~~~~~~P~my 313 (411)
T PF06500_consen 239 QDSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF--TDPEWQQRVPDMY 313 (411)
T ss_dssp S-CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG--H-HHHHTTS-HHH
T ss_pred cCHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh--ccHHHHhcCCHHH
Confidence 233333 3466677766544 777999999999999999999999899999999998643210 0000000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh--hhc--CCCCcceEEEeeCCCc
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQ--GRF--EEVEVPMLICHGGDDV 262 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~i~~P~l~i~g~~D~ 262 (308)
...+.. .+......+......... ..+. ..+ .+..+|+|.+.|++|+
T Consensus 314 ~d~LA~--------rlG~~~~~~~~l~~el~~---------------------~SLk~qGlL~~rr~~~plL~i~~~~D~ 364 (411)
T PF06500_consen 314 LDVLAS--------RLGMAAVSDESLRGELNK---------------------FSLKTQGLLSGRRCPTPLLAINGEDDP 364 (411)
T ss_dssp HHHHHH--------HCT-SCE-HHHHHHHGGG---------------------GSTTTTTTTTSS-BSS-EEEEEETT-S
T ss_pred HHHHHH--------HhCCccCCHHHHHHHHHh---------------------cCcchhccccCCCCCcceEEeecCCCC
Confidence 000000 000000001111111110 1111 123 5678999999999999
Q ss_pred ccChHHHHHHHHHhcCCCCcEEEecCCc-cccc
Q 035721 263 VCDPACVEELYKRAASKDKTLSIYPGMW-HQLI 294 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~ 294 (308)
++|.+..+-++..- .+.+...++... |.-+
T Consensus 365 v~P~eD~~lia~~s--~~gk~~~~~~~~~~~gy 395 (411)
T PF06500_consen 365 VSPIEDSRLIAESS--TDGKALRIPSKPLHMGY 395 (411)
T ss_dssp SS-HHHHHHHHHTB--TT-EEEEE-SSSHHHHH
T ss_pred CCCHHHHHHHHhcC--CCCceeecCCCccccch
Confidence 99999988887765 355677776443 4443
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-17 Score=123.12 Aligned_cols=186 Identities=20% Similarity=0.187 Sum_probs=142.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCcc----c--c
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLV----A--H 106 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~----~--~ 106 (308)
..+...+ .++..++..|... .+.|.||++|+..+-.. ..+.+++.|+..||.|+++|+-+. |.+.... . .
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~-~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGA-GGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcC-CCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 3454555 6888888888765 33499999999988776 668999999999999999998763 3222211 0 0
Q ss_pred ----CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 107 ----IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 107 ----~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
..+..+...|+.+.++++..... +..+|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~---------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD---------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc----------
Confidence 01235677899999999987642 5778999999999999999999887 6899887666322110
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.....++++|+++.+|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 0113578899999999999
Q ss_pred cccChHHHHHHHHHhcCC--CCcEEEecCCccccc
Q 035721 262 VVCDPACVEELYKRAASK--DKTLSIYPGMWHQLI 294 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 294 (308)
..+|......+.+.+... ++++.+++++.|.++
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 999999888888887644 688999999999998
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-17 Score=141.75 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=152.1
Q ss_pred cccccceeEEcCCCcEEEEEE-ecCCC-CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQW-WTPLP-PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~-~~~~~-~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+..+..++++.||.+|.+.+ +.+.. ...+.|+||++||..+.+. ..|......|.++||.|+.++.||-|.-....
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 456677788999999999844 44432 1245699999999776553 23455566788999999999999976544311
Q ss_pred cc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 AH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 ~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.. ...-....+|+.+.++++..+.. ++.++.+.|.|.||.++..++.++|++++++|+..|.......+....
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~--- 569 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDES--- 569 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCC---
Confidence 11 00111346788888888876644 788999999999999999999999999999999998766432110000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-eEEEeeC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-MLICHGG 259 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~ 259 (308)
.+.. ..+ ...+ .+ +.-.....++.. ......+.+++.| +|+++|.
T Consensus 570 ---------~p~~---------------~~~-~~e~-G~-------p~~~~~~~~l~~-~SP~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 570 ---------IPLT---------------TGE-FEEW-GN-------PQDPQYYEYMKS-YSPYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred ---------CCCC---------------hhH-HHHh-CC-------CCCHHHHHHHHH-cCchhccCccCCCceeEEecC
Confidence 0000 000 0000 00 000011111111 1222445677889 5677999
Q ss_pred CCcccChHHHHHHHHHhcC--CCCcEEEe---cCCcccccCCc
Q 035721 260 DDVVCDPACVEELYKRAAS--KDKTLSIY---PGMWHQLIGEP 297 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~~~ 297 (308)
+|..|++.++.++..++.. .+.+++++ +++||......
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r 658 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGR 658 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCH
Confidence 9999999999999988853 34677788 89999855433
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.9e-18 Score=127.47 Aligned_cols=256 Identities=14% Similarity=0.125 Sum_probs=145.7
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHH-----HHHHHHcCCeEEEecCCCCcCCCC--ccc-
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT-----AVLFAKSGFATCAIDHQGHGFSDG--LVA- 105 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~~~- 105 (308)
..+.+.-| .+++.++|..++ ++|++|-.|..|.+....++.+ .+.+.++ +.++-+|.||+..-.. +.+
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~--~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKG--NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEEEETTE-EEEEEEESS--T--TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-
T ss_pred ceeccCce-EEEEEEEecCCC--CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccc
Confidence 34566667 788888886553 5999999999998876433433 4455555 9999999999976443 222
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
...+++++++++..++++++.+ .++-+|-..||+|..++|..+|++|.|+||+++...... +.......
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~lk-----~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g------w~Ew~~~K 146 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGLK-----SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG------WMEWFYQK 146 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT--------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCCcc-----EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc------HHHHHHHH
Confidence 2358999999999999999998 999999999999999999999999999999999755321 11111111
Q ss_pred hh-hhCCCcccccCCC-CCCCcccc------cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEe
Q 035721 186 VA-WLVPTWRVVPTRG-SLPMVSFK------EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 186 ~~-~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 257 (308)
+. ..+.......... .+....|. +....+.+............+..+...+....++....+...||+|++.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 11 1111100000000 00000000 1111222222211222223344444444444666666778889999999
Q ss_pred eCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 258 GGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
|+..+.. +.+.++..++...+.++..+++||=.+. ++|..+++.+.=
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHH
Confidence 9998775 6778888888656789999999999999 999999887653
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-17 Score=134.20 Aligned_cols=241 Identities=12% Similarity=0.019 Sum_probs=146.0
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
.+....|.|.....-+.+||+++++-.... .+ +.+++.|.++||.|+.+|+++-+.+.. ..+++++++.+
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r----~~~ldDYv~~i 274 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR----EWGLSTYVDAL 274 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc----CCCHHHHHHHH
Confidence 344555666554445788999999763322 22 579999999999999999998665532 24789999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHH----HHHhcCC-CccEEEEeCCcCCCCcCCCCCchh-hhhHHHhh----
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALY----ITLRQKG-AWDGLILNGAMCGISQKFKPPWPL-EHLLFTVA---- 187 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~---- 187 (308)
.++++.+.... +..++.++|+|+||.++.. +++++++ +|++++++.+...+.......... ........
T Consensus 275 ~~Ald~V~~~t-G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~ 353 (560)
T TIGR01839 275 KEAVDAVRAIT-GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSY 353 (560)
T ss_pred HHHHHHHHHhc-CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHH
Confidence 99999988765 6678999999999999986 7888885 899999999888765422111111 11111100
Q ss_pred --hhCCCcccccCCCCCCCc--ccccHHHH-------------HHHhhCCCCCCCcchHHHHHHHHHHHHHhhh------
Q 035721 188 --WLVPTWRVVPTRGSLPMV--SFKEEWKR-------------KLALSSPRRPVARPRAATALELLRVSRDLQG------ 244 (308)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 244 (308)
..++........ .+.+. .+...... ..+..+.... .......+..++.. ..+..
T Consensus 354 ~~G~lpg~~ma~~F-~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~l-Pg~~~~e~l~ly~~-N~L~~pG~l~v 430 (560)
T TIGR01839 354 QAGVLDGSEMAKVF-AWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRL-PAAFHGDLLDMFKS-NPLTRPDALEV 430 (560)
T ss_pred hcCCcCHHHHHHHH-HhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccc-hHHHHHHHHHHHhc-CCCCCCCCEEE
Confidence 111110000000 00000 00000000 0000010000 00111122222211 12211
Q ss_pred -----hcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 245 -----RFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 245 -----~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+++|++|++++.|++|.++|++.+..+.+.+.+ +++++..+ +||.--
T Consensus 431 ~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 431 CGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQS 483 (560)
T ss_pred CCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcccc
Confidence 3678999999999999999999999999998875 57777765 889755
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.2e-18 Score=126.75 Aligned_cols=182 Identities=20% Similarity=0.215 Sum_probs=104.9
Q ss_pred CCcceEEEEccCCCccchHHHHHHH-HHHHcCCeEEEecCCC------CcC---CCCccc---c-----CCCcchHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAV-LFAKSGFATCAIDHQG------HGF---SDGLVA---H-----IPDLNPVVEDA 117 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~~~~---~-----~~~~~~~~~d~ 117 (308)
+..++||++||+|.+.. .+..+.. .+......++.++-|- .|. +-.... . ...+...++.+
T Consensus 12 ~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp T-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 46899999999998875 4333333 1222346677765442 122 111000 0 00122233455
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccccc
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVP 197 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (308)
.++++.......+..++++.|+|+||.+|+.++.++|+.+.++|.+++........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------ 146 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------ 146 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------------
Confidence 55555443221166799999999999999999999999999999999854322100
Q ss_pred CCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 198 TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
........ ++|++++||.+|+++|.+.++...+.+.
T Consensus 147 ------------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~ 182 (216)
T PF02230_consen 147 ------------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLK 182 (216)
T ss_dssp ------------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHHHHHHH
Confidence 00001111 6899999999999999999999888886
Q ss_pred C--CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 278 S--KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 278 ~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
. .+++++.++++||.+. +.-..+.+-+.+
T Consensus 183 ~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 183 AAGANVEFHEYPGGGHEISPEELRDLREFLEK 214 (216)
T ss_dssp CTT-GEEEEEETT-SSS--HHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Confidence 4 3579999999999988 555544444433
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.3e-17 Score=118.92 Aligned_cols=259 Identities=12% Similarity=0.065 Sum_probs=168.1
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHH-----HHHHHHcCCeEEEecCCCCcCCCC--c
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT-----AVLFAKSGFATCAIDHQGHGFSDG--L 103 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~ 103 (308)
.++..+.+..| .+++.++|..++ ++|++|-.|..+.+....++.+ +..+.++ |.|+-+|-||+-.-.+ +
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~--~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG--NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC--CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCC
Confidence 45667777777 688888887664 5888999999998876433432 4556666 9999999999855433 2
Q ss_pred cc-cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhh
Q 035721 104 VA-HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182 (308)
Q Consensus 104 ~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 182 (308)
.+ ...+++++++++..++++++.+ .++-+|...|++|..++|..+|++|-++||+++.+...... .|...++
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk-----~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi--ew~~~K~ 170 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK-----SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI--EWAYNKV 170 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc-----eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH--HHHHHHH
Confidence 22 2358999999999999999998 89999999999999999999999999999999865533211 1111111
Q ss_pred HHHhhh------hCCCcccccCCCCCCCc-ccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC----CCCc
Q 035721 183 LFTVAW------LVPTWRVVPTRGSLPMV-SFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE----EVEV 251 (308)
Q Consensus 183 ~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~ 251 (308)
...+.. ......... .+.+. .-.+....+.+............+..++..+....|+..... .++|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H---~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc 247 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAH---HFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKC 247 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHH---HhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccc
Confidence 110000 000000000 00000 011222223333322222222334444444433344433333 4569
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
|++++.|+..+.+ +.+..+...+...+.++..+.++|-.+. ++|..+++.+.
T Consensus 248 ~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 248 PVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred cEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 9999999998876 5667777777556789999999999999 79999888764
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=116.58 Aligned_cols=254 Identities=18% Similarity=0.174 Sum_probs=153.8
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc--cCCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA--HIPDLN 111 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~ 111 (308)
..+...||..+....|...+. ....++.-.+.+ -...+++.++..+.++||.|+.+|+||.|.|..... ..+.+.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~--~~g~~~va~a~G-v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~ 84 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK--ASGRLVVAGATG-VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYL 84 (281)
T ss_pred cccccCCCccCccccccCCCC--CCCcEEecccCC-cchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchh
Confidence 456678999999988865432 222344444444 444477999999999999999999999999987433 234566
Q ss_pred hHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---------
Q 035721 112 PVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH--------- 181 (308)
Q Consensus 112 ~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~--------- 181 (308)
+++ .|+.++++.++... ...+...+|||+||.+.-.+. +++ +..+....+........+........
T Consensus 85 DwA~~D~~aal~~~~~~~-~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 85 DWARLDFPAALAALKKAL-PGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhhcchHHHHHHHHhhC-CCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeecccccc
Confidence 665 58999999888744 566899999999998655444 445 56666665555443332211000000
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.+.......+........ ++....+++ + ......+..+...+.. ....+..+.+.+|++++...+|
T Consensus 162 ~lt~w~g~~p~~l~G~G~-d~p~~v~Rd-W--~RwcR~p~y~fddp~~----------~~~~q~yaaVrtPi~~~~~~DD 227 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGS-DLPGTVMRD-W--ARWCRHPRYYFDDPAM----------RNYRQVYAAVRTPITFSRALDD 227 (281)
T ss_pred chhhccccCcHhhcCCCc-cCcchHHHH-H--HHHhcCccccccChhH----------hHHHHHHHHhcCceeeeccCCC
Confidence 000111111111111110 111111111 1 1112222222222222 2344556778999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecC----Cccccc-CCc-hhhHHHhhhc
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPG----MWHQLI-GEP-EENVELVFGE 307 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~-~~~-~~~~~~i~~~ 307 (308)
+.+|+...+.+.+...+...+...++. -||+-. .++ |...++++.+
T Consensus 228 ~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 228 PWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred CcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 999999999999888655566666664 499988 666 7666666654
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=116.93 Aligned_cols=235 Identities=16% Similarity=0.109 Sum_probs=129.9
Q ss_pred eeEEcCCCcEEEEEEecCCCCCC-CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAK-TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIPDLN 111 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~ 111 (308)
..+...+|.+|+.+.-.|++..+ ..++||+.+||+.... .+..++.+|+.+||+|+.+|.-.| |.|++.... +++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cchH
Confidence 45667789999998888876533 4589999999998877 447999999999999999998876 888887555 5888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh-hC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW-LV 190 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 190 (308)
...+++..+++++... +..++.++.-|+.|.+|...+.+- .+.-+|...+...+.. .+.+.... ++
T Consensus 83 ~g~~sL~~V~dwl~~~--g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~---------TLe~al~~Dyl 149 (294)
T PF02273_consen 83 IGKASLLTVIDWLATR--GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD---------TLEKALGYDYL 149 (294)
T ss_dssp HHHHHHHHHHHHHHHT--T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH---------HHHHHHSS-GG
T ss_pred HhHHHHHHHHHHHHhc--CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH---------HHHHHhccchh
Confidence 8899999999999966 788999999999999999999854 3777777666544221 11111100 00
Q ss_pred CCccc-ccCCCCCCCcccccHHHH-HHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 191 PTWRV-VPTRGSLPMVSFKEEWKR-KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 191 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
..... .+....+........... +...... .........++.+.+|++.+++++|.+|....
T Consensus 150 ~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w----------------~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~e 213 (294)
T PF02273_consen 150 QLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGW----------------DDLDSTINDMKRLSIPFIAFTANDDDWVKQSE 213 (294)
T ss_dssp GS-GGG--SEEEETTEEEEHHHHHHHHHHTT-----------------SSHHHHHHHHTT--S-EEEEEETT-TTS-HHH
T ss_pred hcchhhCCCcccccccccchHHHHHHHHHcCC----------------ccchhHHHHHhhCCCCEEEEEeCCCccccHHH
Confidence 00000 000001111111111111 1111110 00123345677889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCcccccCCchh
Q 035721 269 VEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 299 (308)
+.++...+.+...+++.++|++|.+.+++-.
T Consensus 214 V~~~~~~~~s~~~klysl~Gs~HdL~enl~v 244 (294)
T PF02273_consen 214 VEELLDNINSNKCKLYSLPGSSHDLGENLVV 244 (294)
T ss_dssp HHHHHTT-TT--EEEEEETT-SS-TTSSHHH
T ss_pred HHHHHHhcCCCceeEEEecCccchhhhChHH
Confidence 9999988877789999999999999887753
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=121.21 Aligned_cols=228 Identities=19% Similarity=0.212 Sum_probs=154.2
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC----c
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG----L 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~ 103 (308)
.++.-+.+++..+|.+|..+...|...+.+.|.||-.||+++... .|..+. .++..||.|+.+|.||.|.|.. +
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecccCCCccccCCCC
Confidence 344556788899999999999999877677899999999998876 444443 3456799999999999998732 1
Q ss_pred ccc----------------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 104 VAH----------------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 104 ~~~----------------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
+.. .+-......|+..+++.+..-.. +.+++.+.|.|.||.+++.++...| +++++++.-|.
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 111 01123445677777777665444 7779999999999999999999887 79999988876
Q ss_pred CCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHH-HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhh
Q 035721 167 CGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW-KRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245 (308)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
..-..... ......+. ....+.+.- .+.-......+.. .+....
T Consensus 210 l~df~r~i-----------------------------~~~~~~~ydei~~y~k~h-----~~~e~~v~~TL~y-fD~~n~ 254 (321)
T COG3458 210 LSDFPRAI-----------------------------ELATEGPYDEIQTYFKRH-----DPKEAEVFETLSY-FDIVNL 254 (321)
T ss_pred cccchhhe-----------------------------eecccCcHHHHHHHHHhc-----CchHHHHHHHHhh-hhhhhH
Confidence 44221100 00000000 000000000 0001111111111 456666
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
...+++|+|+..|--|++|||...-..++.+.. .+++.+++.-+|.-.
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~ 302 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG 302 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC
Confidence 788999999999999999999999999999974 578888887778766
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-17 Score=123.15 Aligned_cols=258 Identities=17% Similarity=0.134 Sum_probs=150.4
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccc--h--------HHHHHHH---HHHHcCCeEEEecCCCCc-CCCCcc-
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--W--------IVQLTAV---LFAKSGFATCAIDHQGHG-FSDGLV- 104 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~--------~~~~~~~---~l~~~g~~v~~~d~~G~G-~s~~~~- 104 (308)
++..|.|..|+.-+. ....+|+++|++.+++. . ||+.++- .+-...|-||+.|-.|.+ .|+++.
T Consensus 34 ~~~~vay~T~Gtln~-~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 34 SDARVAYETYGTLNA-EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred cCcEEEEEecccccc-cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 467899999997765 45678999999988543 1 5554431 233345999999999875 444321
Q ss_pred ---c--------cCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 105 ---A--------HIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 105 ---~--------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
. ...+++++++.-..++++++++ ++. ++|-||||+.|+.++..+|++|.++|.+++.......
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~-----~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK-----KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc-----eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 1 1235667777777788888887 666 9999999999999999999999999998875443211
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCCC-CCCCccc-----------cc----------------------HHHHHHHhh
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRG-SLPMVSF-----------KE----------------------EWKRKLALS 218 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~----------------------~~~~~~~~~ 218 (308)
. .......+..-..-|.+.-..... ....... +. ....+.+..
T Consensus 188 ~---ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~ 264 (368)
T COG2021 188 N---IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLD 264 (368)
T ss_pred H---HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHH
Confidence 0 000000000000011110000000 0000000 00 000011110
Q ss_pred -CCCCCCCcchHHHHHHHHHHH---------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEec-
Q 035721 219 -SPRRPVARPRAATALELLRVS---------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP- 287 (308)
Q Consensus 219 -~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (308)
.-..+........+..+.+.. .++...++++++|++++.-+.|.++|++..+++.+.++...+ +++++
T Consensus 265 ~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S 343 (368)
T COG2021 265 YQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDS 343 (368)
T ss_pred HHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecC
Confidence 000111111111112222221 123344788999999999999999999999999999964333 65554
Q ss_pred CCccccc-CCchhhHHHhhhc
Q 035721 288 GMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 288 ~~gH~~~-~~~~~~~~~i~~~ 307 (308)
..||.-+ .+.+.+...|.++
T Consensus 344 ~~GHDaFL~e~~~~~~~i~~f 364 (368)
T COG2021 344 PYGHDAFLVESEAVGPLIRKF 364 (368)
T ss_pred CCCchhhhcchhhhhHHHHHH
Confidence 6899998 7676666666554
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=101.51 Aligned_cols=79 Identities=37% Similarity=0.654 Sum_probs=70.9
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
|.+|+++.|.|++. ++.+|+++||++.++. .+..+++.|+++||.|+++|+||||.|++......+++++++|+..+
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQF 77 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHH
Confidence 67899999998874 6999999999998888 45899999999999999999999999998777777899999999988
Q ss_pred HH
Q 035721 121 FD 122 (308)
Q Consensus 121 l~ 122 (308)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 64
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=127.83 Aligned_cols=129 Identities=17% Similarity=0.204 Sum_probs=97.3
Q ss_pred CCcEEEEEEecC--CCCCCCcceEEEEccCCCccchHHHH---------HHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 40 RGLRLFTQWWTP--LPPAKTLGVLCVVHGFTGESSWIVQL---------TAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 40 ~g~~l~~~~~~~--~~~~~~~~~vv~~hG~~~~~~~~~~~---------~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
||++|...++.| ..+ .+.|+||..|+++......... ....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~-~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGG-GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTS-SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEecCCCCC-CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 789999999999 433 6789999999998654211111 112388999999999999999999876642
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
.....+|..++|+++..+.+...+|.++|.|++|..++.+|...|..+++++...+......
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 56678999999999998755566999999999999999999988889999999888766554
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=126.27 Aligned_cols=112 Identities=14% Similarity=0.049 Sum_probs=85.7
Q ss_pred CCcceEEEEccCCCccc--hHHHHHHHHHHH--cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-C
Q 035721 56 KTLGVLCVVHGFTGESS--WIVQLTAVLFAK--SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-P 130 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~ 130 (308)
..+|++|++||++.+.. .+...+.+.|.. ..|+|+++|++|+|.+..+.... .....++++.++++.+....+ +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~-~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAA-YTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccc-cHHHHHHHHHHHHHHHHHhhCCC
Confidence 34789999999987542 132346665542 25999999999999886553332 345677888888888864322 4
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
..+++|+||||||.+|..++.+.|++|.++++++|...
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 56999999999999999999999999999999999754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.3e-15 Score=116.79 Aligned_cols=217 Identities=18% Similarity=0.185 Sum_probs=128.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCcccc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.++..+...+| .+..++|.|.. ...|+||++||.+. +.. .+..+++.|+. .|+.|+++|+|.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~------ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP--DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEA------ 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC--CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCC------
Confidence 34455666666 58888888854 34689999999773 333 45677888877 4999999999964322
Q ss_pred CCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCCCCcCCCCC
Q 035721 107 IPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCGISQKFKPP 176 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~ 176 (308)
.+....+|+.++++++... .+ +..+++|+|+|+||.+|+.++.+. +.++++++++.|....... ..
T Consensus 127 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~--~s 202 (318)
T PRK10162 127 --RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS--VS 202 (318)
T ss_pred --CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC--hh
Confidence 2333456666666665432 22 456999999999999999888753 3578999999886653210 00
Q ss_pred chhhhhHHHhhhhCCCcccccCCCCCCCcccccHH---HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW---KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
.. ..... .. .+.... ....+..+..... .+.. ......+..--.|+
T Consensus 203 ------~~---~~~~~---------~~--~l~~~~~~~~~~~y~~~~~~~~-~p~~----------~p~~~~l~~~lPp~ 251 (318)
T PRK10162 203 ------RR---LLGGV---------WD--GLTQQDLQMYEEAYLSNDADRE-SPYY----------CLFNNDLTRDVPPC 251 (318)
T ss_pred ------HH---HhCCC---------cc--ccCHHHHHHHHHHhCCCccccC-Cccc----------CcchhhhhcCCCCe
Confidence 00 00000 00 000000 0111111100000 0000 00001121122599
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 254 LICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
++++|+.|.+.+ ..+.+++.+.. ..+++++++|..|.+.
T Consensus 252 ~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 252 FIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFL 292 (318)
T ss_pred EEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehh
Confidence 999999999874 56677777643 3589999999999876
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-17 Score=114.15 Aligned_cols=153 Identities=20% Similarity=0.188 Sum_probs=99.7
Q ss_pred EEEEccCCCccch-HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
|+++||++++... |+..+.+.|... ++|-..++ +. .+.+++...+.+.+..+. .++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~-----P~~~~W~~~l~~~i~~~~------~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DN-----PDLDEWVQALDQAIDAID------EPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS-------HHHHHHHHHHCCHC-T------TTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CC-----CCHHHHHHHHHHHHhhcC------CCeEEEEe
Confidence 6899999988653 345667777665 77777666 11 256677776666666432 27999999
Q ss_pred chhhHHHHHHH-HhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhh
Q 035721 140 SLGGAIALYIT-LRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALS 218 (308)
Q Consensus 140 S~Gg~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (308)
|+|+..+++++ .....+|++++|++|+............ . .+.
T Consensus 63 SLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~--------------------~-~f~--------------- 106 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPEL--------------------D-GFT--------------- 106 (171)
T ss_dssp THHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGG--------------------C-CCT---------------
T ss_pred CHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhc--------------------c-ccc---------------
Confidence 99999999999 7777899999999996431000000000 0 000
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 219 SPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
. .....+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..
T Consensus 107 ----------------------~--~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 107 ----------------------P--LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNA 155 (171)
T ss_dssp ----------------------T--SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSG
T ss_pred ----------------------c--CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccc
Confidence 0 011223467799999999999999999999999 689999999999877
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.5e-16 Score=112.57 Aligned_cols=173 Identities=20% Similarity=0.182 Sum_probs=114.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC--CcCCCC---ccccCCCcchHH---HHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG--HGFSDG---LVAHIPDLNPVV---EDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~---~~~~~~~~~~~~---~d~~~~l~~~~~~ 127 (308)
+..|+||++||+|++...+. ++.+.+..+ +.++.+.=+- .|.-.. .....++.++.. ..+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~~~~-~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLV-PLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhhh-hhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 45789999999998766343 455555454 6665543211 010000 001112333333 3444455555555
Q ss_pred cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcc
Q 035721 128 HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 128 ~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (308)
.+ +.++++++|+|.||++++.+..++|+.++++|++++.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 54 6789999999999999999999999999999999986543310
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEE
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLS 284 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~ 284 (308)
..-..-.+|+++++|+.|+++|...+.++.+.+.. .+++..
T Consensus 140 -------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 140 -------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred -------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 00012257999999999999999998888887753 467888
Q ss_pred EecCCccccc-CCchhhHH
Q 035721 285 IYPGMWHQLI-GEPEENVE 302 (308)
Q Consensus 285 ~~~~~gH~~~-~~~~~~~~ 302 (308)
.++ .||.+. +.-+...+
T Consensus 183 ~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 183 WHE-GGHEIPPEELEAARS 200 (207)
T ss_pred Eec-CCCcCCHHHHHHHHH
Confidence 888 999988 55544443
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-16 Score=120.39 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=84.1
Q ss_pred CcceEEEEccCCCcc-chHHHHHHHHHH-HcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCC
Q 035721 57 TLGVLCVVHGFTGES-SWIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLP 133 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~-~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~ 133 (308)
.+|++|++||++++. ..+...+.+.+. ..+|+|+++|+++++.+.... ...+.....+++..+++.+....+ +.++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 478999999999887 333345565444 457999999999984433221 112455667788888888765422 4468
Q ss_pred EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 134 AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
++++|||+||.+|..++.+.|++++++++++|....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 999999999999999999999999999999987543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.7e-15 Score=112.84 Aligned_cols=239 Identities=18% Similarity=0.144 Sum_probs=95.0
Q ss_pred CcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-
Q 035721 57 TLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA- 129 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~- 129 (308)
++.+||||.|++..-. .|...+++.|.+.||.|+-+-++ |+|. .+++.-++||.+++++++...+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHHHHHHHhhcc
Confidence 4668999999876432 46788999998789999999865 4443 3778889999999999987721
Q ss_pred --CCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCcCCCCcCCCCC---chhhhhHHHhhhhCCCccccc-C
Q 035721 130 --PDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAMCGISQKFKPP---WPLEHLLFTVAWLVPTWRVVP-T 198 (308)
Q Consensus 130 --~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~ 198 (308)
...+|+|+|||.|+.-+++|+.... ..|+++||-+|........... ..................... .
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 4679999999999999999998753 5799999999976544222111 112223333222211110000 0
Q ss_pred CCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHHHHHh
Q 035721 199 RGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEELYKRA 276 (308)
Q Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~ 276 (308)
...+....+ ..+.....+..-. ....-..++........+.+.+..++.|+|++.+++|..+|... .+.+.+++
T Consensus 184 p~~~~~~~~~~~PiTA~Rf~SL~----s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw 259 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAYRFLSLA----SPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERW 259 (303)
T ss_dssp ----GGTTT-SS---HHHHHT-S-----SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------
T ss_pred eccccccccCCCcccHHHHHhcc----CCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccc
Confidence 000111111 1111111111000 00011111111111134556688889999999999999998643 23344443
Q ss_pred cC---C---CCcEEEecCCccccc-CCch----hhHHHhhhc
Q 035721 277 AS---K---DKTLSIYPGMWHQLI-GEPE----ENVELVFGE 307 (308)
Q Consensus 277 ~~---~---~~~~~~~~~~gH~~~-~~~~----~~~~~i~~~ 307 (308)
.. + ...-.++||++|.+- ...+ .+++.|.++
T Consensus 260 ~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~f 301 (303)
T PF08538_consen 260 KAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKF 301 (303)
T ss_dssp ------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccc
Confidence 21 1 123558999999998 4333 355555554
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=116.01 Aligned_cols=106 Identities=10% Similarity=0.031 Sum_probs=83.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+||++..+.++.....+.+++.|.+ |+.|+..|+..-+..+..... .+++++++-+.+++++++. +++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G~------~v~l~ 173 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLGP------DIHVI 173 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhCC------CCcEE
Confidence 378999999887766566889999998 999999999877755433333 4889999888888877632 58999
Q ss_pred EechhhHHHHHHHHhc-----CCCccEEEEeCCcCCCCc
Q 035721 138 SESLGGAIALYITLRQ-----KGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~ 171 (308)
|+|+||..++.+++.. |.+++++++++++..+..
T Consensus 174 GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 174 AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 9999999977665554 667999999999887653
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.4e-15 Score=113.01 Aligned_cols=111 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc---CCeEEEecCCCCcCCCCc-----cccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS---GFATCAIDHQGHGFSDGL-----VAHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
+..+++++|.+|-.+ |+..+.+.|.++ .+.|+++.+.||-.++.. ....+++++.++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 568999999999988 667788877744 799999999999877765 34557888888888888887776432
Q ss_pred -CCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCC
Q 035721 130 -PDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCGI 169 (308)
Q Consensus 130 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~ 169 (308)
...+++++|||.|++++++++.+.+ .+|.+++++-|...-
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 4568999999999999999999999 789999999987553
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=115.36 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=113.1
Q ss_pred ccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCC
Q 035721 21 DEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~ 95 (308)
.++....+++.++..+++.||.-+........ . .++|+|++.||+.+++..|. +.++=.|+++||+|..-+.|
T Consensus 38 ~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~-~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 38 PEIIEKYGYPVEEHEVTTEDGYILTLHRIPRG-K-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred HHHHHHcCCceEEEEEEccCCeEEEEeeecCC-C-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc
Confidence 34455668899999999999986666544333 2 57999999999988876332 35677889999999999999
Q ss_pred CCcCCCCcc---------ccCCCcchHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEE
Q 035721 96 GHGFSDGLV---------AHIPDLNPVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLIL 162 (308)
Q Consensus 96 G~G~s~~~~---------~~~~~~~~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl 162 (308)
|.-.|.... --.+++.+++ .|+-+.|+++.... +.++++.+|||.|+...+..+...|+ +|+..++
T Consensus 116 Gn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T-~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 116 GNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT-GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred CcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc-cccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 977665411 1123566654 59999999988765 67799999999999999988888764 7999999
Q ss_pred eCCcCCC
Q 035721 163 NGAMCGI 169 (308)
Q Consensus 163 ~~~~~~~ 169 (308)
++|....
T Consensus 195 LAP~~~~ 201 (403)
T KOG2624|consen 195 LAPAAFP 201 (403)
T ss_pred ecchhhh
Confidence 9998743
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.2e-14 Score=107.49 Aligned_cols=246 Identities=13% Similarity=0.045 Sum_probs=142.2
Q ss_pred EEEEecCCCC-CCCcceEEEEccCCCccchHHHHH-HHHHHHcCCeEEEecCCCCcCCCCccccCC---Ccc-------h
Q 035721 45 FTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLT-AVLFAKSGFATCAIDHQGHGFSDGLVAHIP---DLN-------P 112 (308)
Q Consensus 45 ~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~---~~~-------~ 112 (308)
++....|... .+.+|++|.++|.|.+.-+.-+.+ +..|.++|+..+.+..|-||...+...... +.. .
T Consensus 78 ~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~ 157 (348)
T PF09752_consen 78 RFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRA 157 (348)
T ss_pred EEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhH
Confidence 3444445543 356899999999887654332344 788888899999999999998765332211 122 2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC---CcCCCCCchhhhhHHHhhhh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI---SQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 189 (308)
.+.+...++.++..+ +..++.+.|.||||.+|...+...|..+..+-++++.... ......... ....+..-
T Consensus 158 ~i~E~~~Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i---~W~~L~~q 232 (348)
T PF09752_consen 158 TILESRALLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSI---NWDALEKQ 232 (348)
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCC---CHHHHHHH
Confidence 345667777888777 7779999999999999999999999877766666654321 111000000 00000000
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-----eEEEeeCCCccc
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-----MLICHGGDDVVC 264 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~ 264 (308)
+.................. ..... .... ... ...........+....+.+..+| +.+|.+++|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~---~~~-~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYV 303 (348)
T PF09752_consen 233 FEDTVYEEEISDIPAQNKS----LPLDS-MEER---RRD-REALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYV 303 (348)
T ss_pred hcccchhhhhcccccCccc----ccchh-hccc---cch-HHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEe
Confidence 0000000000000000000 00000 0000 001 11122222212223334444333 788999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
|...+..+.+.+ |++++..+++ ||..- .+.+.|.+.|.+-
T Consensus 304 Pr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Da 345 (348)
T PF09752_consen 304 PRHGVLSLQEIW--PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDA 345 (348)
T ss_pred chhhcchHHHhC--CCCeEEEecC-CcEEEeeechHHHHHHHHHH
Confidence 999999999999 7899999985 99866 7788888888763
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-15 Score=117.69 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=89.9
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH-----------------HHHHHHHHHHcCCe
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI-----------------VQLTAVLFAKSGFA 88 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-----------------~~~~~~~l~~~g~~ 88 (308)
..++..+...+.+.++..+...+..|++...+.|+||++||-+++.+.. -..++..|+++||.
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 4567777888888899999999898987557789999999987654210 12357889999999
Q ss_pred EEEecCCCCcCCCCccccC----CCcchH---------------HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHH
Q 035721 89 TCAIDHQGHGFSDGLVAHI----PDLNPV---------------VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALY 148 (308)
Q Consensus 89 v~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~ 148 (308)
|+++|.+|+|+........ ++...+ +-|...+++++..... +.++|.++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999876533211 111111 1244557777766655 7889999999999999999
Q ss_pred HHHhcCCCccEEEEeCCcC
Q 035721 149 ITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 149 ~a~~~p~~v~~~vl~~~~~ 167 (308)
+++..+ +|++.|..+-..
T Consensus 243 LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 243 LAALDD-RIKATVANGYLC 260 (390)
T ss_dssp HHHH-T-T--EEEEES-B-
T ss_pred HHHcch-hhHhHhhhhhhh
Confidence 999875 798888776644
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.8e-14 Score=93.03 Aligned_cols=165 Identities=15% Similarity=0.107 Sum_probs=113.0
Q ss_pred CcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCC-----CCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 57 TLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFS-----DGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s-----~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
...+||+.||.+.+.+ .+.+.++..|+.+|+.|..++++-.-.. .+++....-..++...+.++-+.+ .
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-----~ 87 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-----A 87 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-----c
Confidence 4568899999988765 2457889999999999999998764322 122222112233333333333333 3
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
..+.++-|+||||.++..++....-.|+++++++-++.......
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe------------------------------------ 131 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE------------------------------------ 131 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc------------------------------------
Confidence 34899999999999999988876656999999886443221100
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
..-.+.+..+++|++|.+|+.|++-..+.+.... -++..++++++++.
T Consensus 132 -----------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~---ls~~iev~wl~~ad 179 (213)
T COG3571 132 -----------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA---LSDPIEVVWLEDAD 179 (213)
T ss_pred -----------------------------cchhhhccCCCCCeEEeecccccccCHHHHHhhh---cCCceEEEEeccCc
Confidence 0112557789999999999999998777663322 22578999999999
Q ss_pred cccc
Q 035721 291 HQLI 294 (308)
Q Consensus 291 H~~~ 294 (308)
|.+-
T Consensus 180 HDLk 183 (213)
T COG3571 180 HDLK 183 (213)
T ss_pred cccc
Confidence 9875
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.4e-14 Score=99.96 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=127.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC-CCcCCCCccc-------c
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ-GHGFSDGLVA-------H 106 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~-------~ 106 (308)
+....+|.+ .+..+..+. +..||++-...|....-.+..++.++.+||.|+++|+. |--.|...+. .
T Consensus 21 ~~~~v~gld--aYv~gs~~~---~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~ 95 (242)
T KOG3043|consen 21 REEEVGGLD--AYVVGSTSS---KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK 95 (242)
T ss_pred ceEeecCee--EEEecCCCC---CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh
Confidence 333444543 333444432 35677777766655434578899999999999999975 4122211000 0
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..+.+....++..++++++... +..+|.++|++|||.++..+....+ .+.+++.+-|...
T Consensus 96 ~~~~~~~~~~i~~v~k~lk~~g-~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------ 155 (242)
T KOG3043|consen 96 GHSPPKIWKDITAVVKWLKNHG-DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------ 155 (242)
T ss_pred cCCcccchhHHHHHHHHHHHcC-CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC------------------
Confidence 1245555679999999999663 5789999999999999999888887 5777776655311
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
+ .....++++|++++.|+.|.++|+
T Consensus 156 ------------------------------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~ 180 (242)
T KOG3043|consen 156 ------------------------------------------------------D-SADIANVKAPILFLFAELDEDVPP 180 (242)
T ss_pred ------------------------------------------------------C-hhHHhcCCCCEEEEeecccccCCH
Confidence 1 133567889999999999999999
Q ss_pred HHHHHHHHHhcCC---CCcEEEecCCccccc
Q 035721 267 ACVEELYKRAASK---DKTLSIYPGMWHQLI 294 (308)
Q Consensus 267 ~~~~~~~~~~~~~---~~~~~~~~~~gH~~~ 294 (308)
+....+.+.+... +.++.+++|.+|.+.
T Consensus 181 ~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 181 KDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 9999988888642 247999999999876
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-13 Score=100.46 Aligned_cols=179 Identities=19% Similarity=0.162 Sum_probs=119.0
Q ss_pred EecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 48 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
++.|.+. ..-|+|||+||+..... ++..+.++++++||.|+.+|+...+.. ......+++.++++++...
T Consensus 8 v~~P~~~-g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 8 VYYPSSA-GTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred EEecCCC-CCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 3445554 55899999999996666 568999999999999999997654331 2222345555555554432
Q ss_pred c--------C-CCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 128 H--------A-PDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 128 ~--------~-~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
. . +-.++.|.|||-||-+|..++..+ ..+++++|+++|..+.......
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~------------------ 139 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT------------------ 139 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC------------------
Confidence 1 0 556899999999999999999887 4589999999997643311100
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc--------cC
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV--------CD 265 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~--------~~ 265 (308)
.... ......--+..+|+++|..+-+.. +-
T Consensus 140 ---------~P~v---------------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~Ca 177 (259)
T PF12740_consen 140 ---------EPPV---------------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCA 177 (259)
T ss_pred ---------CCcc---------------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCC
Confidence 0000 000111223568999998777742 22
Q ss_pred h--HHHHHHHHHhcCCCCcEEEecCCccccc-CCc
Q 035721 266 P--ACVEELYKRAASKDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~ 297 (308)
+ ..-+++++.+.. .+...+..+.||+-+ +..
T Consensus 178 P~g~n~~~Ff~~~~~-p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 178 PAGVNYREFFDECKP-PSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCHHHHHHhcCC-CEEEEEeCCCCchHhhcCC
Confidence 2 346788888864 466677789999988 554
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-13 Score=97.90 Aligned_cols=181 Identities=17% Similarity=0.116 Sum_probs=103.5
Q ss_pred EEEEccCCCccchH-HHHHHHHHHHcC--CeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 61 LCVVHGFTGESSWI-VQLTAVLFAKSG--FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 61 vv~~hG~~~~~~~~-~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
|+++||+.++.... .+.+.+.+.+.+ ..+.++|++ .......+.+.++++....+ .+.|+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-----~~~li 64 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-----NVVLI 64 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-----CeEEE
Confidence 79999999877533 235566676654 456666665 24444556666666655443 69999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
|.|+||..|..++.+++ +++ |+++|...+... +...+......... +.........
T Consensus 65 GSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~-------------l~~~iG~~~~~~~~----e~~~~~~~~~---- 120 (187)
T PF05728_consen 65 GSSLGGFYATYLAERYG--LPA-VLINPAVRPYEL-------------LQDYIGEQTNPYTG----ESYELTEEHI---- 120 (187)
T ss_pred EEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHH-------------HHHhhCccccCCCC----ccceechHhh----
Confidence 99999999999999886 445 888987653311 11111110000000 0000000000
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCc
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEP 297 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 297 (308)
.....+......-..+++++.++.|.+++.+.+...+ .++..++.+|++|.+.. -
T Consensus 121 -------------------~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~-----~~~~~~i~~ggdH~f~~-f 175 (187)
T PF05728_consen 121 -------------------EELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAKY-----RGCAQIIEEGGDHSFQD-F 175 (187)
T ss_pred -------------------hhcceEeccccCCCccEEEEEecCCcccCHHHHHHHh-----cCceEEEEeCCCCCCcc-H
Confidence 0000111111233578999999999999985554433 24556677889998873 2
Q ss_pred hhhHHHhhhc
Q 035721 298 EENVELVFGE 307 (308)
Q Consensus 298 ~~~~~~i~~~ 307 (308)
++....|+++
T Consensus 176 ~~~l~~i~~f 185 (187)
T PF05728_consen 176 EEYLPQIIAF 185 (187)
T ss_pred HHHHHHHHHh
Confidence 3345566554
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.4e-14 Score=121.63 Aligned_cols=119 Identities=24% Similarity=0.179 Sum_probs=89.4
Q ss_pred eeEEcCCCcEEEEEEecCCC-----CCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc-----
Q 035721 34 EYITNSRGLRLFTQWWTPLP-----PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL----- 103 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~-----~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~----- 103 (308)
..+...++.++.|...+... .....|+||++||++++.. .|..+++.|.++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 35667778788776654331 1122579999999999987 567899999989999999999999999432
Q ss_pred ----ccc-------------CCCcchHHHHHHHHHHHHH------Hh---c--CCCCCEEEEEechhhHHHHHHHHhc
Q 035721 104 ----VAH-------------IPDLNPVVEDAISFFDSFR------AR---H--APDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 104 ----~~~-------------~~~~~~~~~d~~~~l~~~~------~~---~--~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
... ...+++.+.|+..+...+. .. . .+..+++++||||||.++..++...
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 110 0256788899999988887 21 0 0567999999999999999998753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=103.26 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=72.6
Q ss_pred EEEEccCCCcc---chHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---cC-CCC
Q 035721 61 LCVVHGFTGES---SWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR---HA-PDL 132 (308)
Q Consensus 61 vv~~hG~~~~~---~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~ 132 (308)
||++||.+... ... ..++..+++ .|+.|+.+|+|=.. . ..+.+..+|+.++++++... .+ +.+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p------~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAP------E--APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TT------T--SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccc------c--ccccccccccccceeeecccccccccccc
Confidence 78999987543 223 355666664 79999999999321 1 36788899999999998776 12 678
Q ss_pred CEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGI 169 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 169 (308)
+++++|+|.||.+++.++....+ .++++++++|....
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999875443 38999999996554
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.9e-13 Score=97.95 Aligned_cols=124 Identities=14% Similarity=0.111 Sum_probs=83.8
Q ss_pred EEEEEecCCCCC-CCcceEEEEccCCCccchHHH-HHHHHHHH-cCCeEEEecCCCCcCCCCcc----ccCCCcchHHHH
Q 035721 44 LFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQ-LTAVLFAK-SGFATCAIDHQGHGFSDGLV----AHIPDLNPVVED 116 (308)
Q Consensus 44 l~~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~d 116 (308)
|.|++|.|+... .+.|.||++||.+++...+.. .-...|++ +||.|+.++.........-. .....-...+..
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 468888887542 257999999999988763322 11233444 58999998854221111100 000011122456
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 117 AISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 117 ~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
|.++++++..++. +..+|.+.|+|.||+++..++..+|+.+.++...++..
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 7777777777666 88999999999999999999999999999988877653
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.3e-14 Score=122.12 Aligned_cols=219 Identities=14% Similarity=0.087 Sum_probs=123.4
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---------------cCCCCCEEEEEech
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR---------------HAPDLPAFLYSESL 141 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~---------------~~~~~~~~l~G~S~ 141 (308)
.+.+.|..+||.|+..|.||.|.|++.... ...+..+|..++|+++..+ .+...+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456789999999999999999999986432 2245578999999999842 11356999999999
Q ss_pred hhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh-------hhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 142 GGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL-------EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 142 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
||.+++.+|...|+.++++|..++.............. ......+.......... ............
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~------~~~~~~~~~~~~ 421 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLL------AGDYLRHNEACE 421 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccC------cchhhcchHHHH
Confidence 99999999999888999999887765432111000000 00000000000000000 000000000000
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQ 292 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 292 (308)
.............. .....+... .++...+.++++|+|+++|..|..++++.+.++++.+.. .+.++.+. .++|.
T Consensus 422 ~~~~~~~~~~~~~~-~~y~~fW~~-rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~ 498 (767)
T PRK05371 422 KLLAELTAAQDRKT-GDYNDFWDD-RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHV 498 (767)
T ss_pred HHHhhhhhhhhhcC-CCccHHHHh-CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCcc
Confidence 00000000000000 000001111 233455678999999999999999999888888888752 24566544 47896
Q ss_pred cc--CCchhhHHHhhh
Q 035721 293 LI--GEPEENVELVFG 306 (308)
Q Consensus 293 ~~--~~~~~~~~~i~~ 306 (308)
.. ..+.++.+.+.+
T Consensus 499 ~~~~~~~~d~~e~~~~ 514 (767)
T PRK05371 499 YPNNWQSIDFRDTMNA 514 (767)
T ss_pred CCCchhHHHHHHHHHH
Confidence 55 333444444443
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.55 E-value=8e-14 Score=106.00 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=77.8
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
++|+|+|+.+++.. .+..+++.|....+.|+.++.+|.+..... . .++++++++..+.|...... .++.|+|
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~~~-~--~si~~la~~y~~~I~~~~~~----gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDEPP-P--DSIEELASRYAEAIRARQPE----GPYVLAG 72 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTSHE-E--SSHHHHHHHHHHHHHHHTSS----SSEEEEE
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCCCC-C--CCHHHHHHHHHHHhhhhCCC----CCeeehc
Confidence 36999999999877 558999999764589999999999832222 2 37888887777766555432 3999999
Q ss_pred echhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 139 ESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
||+||.+|..+|.+- ...+..++++++...
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999999999764 345899999997543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.7e-14 Score=97.73 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=123.6
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
..+||+.|=++-.. .-+.+++.|+++|+.|+.+|-+-+=.+.+ +.++.+.|+..++++...+. +..+++|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w-~~~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARW-GRKRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHh-CCceEEEEe
Confidence 46788888777665 44789999999999999999765544432 66778999999999888775 777999999
Q ss_pred echhhHHHHHHHHhcC----CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 139 ESLGGAIALYITLRQK----GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
+|+|+-+.-....+.| ++|+.++|+++.....-.... .. +....-.+.
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv-------~~-----------------wlg~~~~~~---- 126 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHV-------SG-----------------WLGMGGDDA---- 126 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEh-------hh-----------------hcCCCCCcc----
Confidence 9999988877777766 579999999986443211100 00 000000000
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
. .+..+.+.++ ..|+++|+|+++.-..+.. +..++++.+.+| +||.+
T Consensus 127 -------~-----------------~~~~pei~~l~~~~v~CiyG~~E~d~~cp~-------l~~~~~~~i~lp-GgHHf 174 (192)
T PF06057_consen 127 -------A-----------------YPVIPEIAKLPPAPVQCIYGEDEDDSLCPS-------LRQPGVEVIALP-GGHHF 174 (192)
T ss_pred -------c-----------------CCchHHHHhCCCCeEEEEEcCCCCCCcCcc-------ccCCCcEEEEcC-CCcCC
Confidence 0 0112333444 3599999999886543322 233678999999 77888
Q ss_pred cCCchhhHHHhhhc
Q 035721 294 IGEPEENVELVFGE 307 (308)
Q Consensus 294 ~~~~~~~~~~i~~~ 307 (308)
-++-+.+++.|++.
T Consensus 175 d~dy~~La~~Il~~ 188 (192)
T PF06057_consen 175 DGDYDALAKRILDA 188 (192)
T ss_pred CCCHHHHHHHHHHH
Confidence 86677778777754
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-11 Score=98.54 Aligned_cols=212 Identities=21% Similarity=0.175 Sum_probs=126.9
Q ss_pred CCCcEEEEEEecC-CCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 39 SRGLRLFTQWWTP-LPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 39 ~~g~~l~~~~~~~-~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.++..+.++++.| .....+.|+||++||.+.... .....+...+...|+.|+++|+|-.- . ..+....
T Consensus 59 ~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP------e--~~~p~~~ 130 (312)
T COG0657 59 PSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP------E--HPFPAAL 130 (312)
T ss_pred CCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC------C--CCCCchH
Confidence 3444577888887 222245899999999875432 22234555566679999999998322 2 2566667
Q ss_pred HHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 115 EDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 115 ~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
+|+.+.++++..+. + +++++.+.|+|.||.+++.++..-.+ ...+.+++.|...... .......
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~------- 202 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPG------- 202 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhh-------
Confidence 77777777776542 2 67899999999999999988876553 4788999999876553 1100000
Q ss_pred hhhCCCcccccCCCCCCCcccccHH----HHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeCCC
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEW----KRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D 261 (308)
......+.... ....+......... +.. ..+ .+.+.. -.|+++++|+.|
T Consensus 203 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~----------spl~~~~~~~-lPP~~i~~a~~D 256 (312)
T COG0657 203 --------------YGEADLLDAAAILAWFADLYLGAAPDRED-PEA----------SPLASDDLSG-LPPTLIQTAEFD 256 (312)
T ss_pred --------------cCCccccCHHHHHHHHHHHhCcCccccCC-Ccc----------CccccccccC-CCCEEEEecCCC
Confidence 00000000000 00011100000000 000 000 011333 458999999999
Q ss_pred cccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 262 VVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.+ ....+.+.+.. ..++++.+++..|.+.
T Consensus 257 ~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~ 289 (312)
T COG0657 257 PLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFD 289 (312)
T ss_pred cchh--HHHHHHHHHHHcCCeEEEEEeCCcceecc
Confidence 9987 56666666642 3468899999999875
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1e-12 Score=100.46 Aligned_cols=124 Identities=19% Similarity=0.168 Sum_probs=94.6
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCcceEEEEccCCCccchHHHHHHHHHHHc---------CCeEEEecCCCCcCCCCcc
Q 035721 36 ITNSRGLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQLTAVLFAKS---------GFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~ 104 (308)
-+...|.+|++....+.... ..-.+++++||++|+...++ .+++.|.+. -|.|+++.+||+|.|+++.
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 34557999999888766431 22347999999999877554 678888654 2689999999999999977
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
....+..+.+.-+..++-.++.+ ++.|-|-.||+.|+..+|..+|++|.|+-+..+
T Consensus 207 k~GFn~~a~ArvmrkLMlRLg~n-----kffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 207 KTGFNAAATARVMRKLMLRLGYN-----KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cCCccHHHHHHHHHHHHHHhCcc-----eeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 65445555555555565555554 999999999999999999999999988765443
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-11 Score=96.54 Aligned_cols=133 Identities=17% Similarity=0.038 Sum_probs=87.5
Q ss_pred eEEcCCCcEEEEEEecCCCCC--CCcceEEEEccCCCccc----hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccC
Q 035721 35 YITNSRGLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESS----WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
.+.......+..++|.|.... ...|.||++||.|.... ..+..+...++. .+..|+++|+|=--+..-+
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P---- 140 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP---- 140 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----
Confidence 334444557888888887653 36799999999874322 244667777754 4889999999832222111
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCCCCc
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~ 171 (308)
..+++..+.+.-+.+..-...+ +..+++|.|-|.||.+|..++.+. +.++++.|++-|......
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 2344444444444442111122 788999999999999999888753 357999999999877543
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.1e-12 Score=97.44 Aligned_cols=236 Identities=14% Similarity=0.050 Sum_probs=137.3
Q ss_pred cCCCCCCCcceEEEEccCCCccch----HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH-HHHHHHHHHH
Q 035721 50 TPLPPAKTLGVLCVVHGFTGESSW----IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV-EDAISFFDSF 124 (308)
Q Consensus 50 ~~~~~~~~~~~vv~~hG~~~~~~~----~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~-~d~~~~l~~~ 124 (308)
.|...+.-+++++++|.+-..... .-..++..|.++|..|+.+++++-..+... .++++++ +.+...++.+
T Consensus 99 ~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid~v 174 (445)
T COG3243 99 KPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAIDTV 174 (445)
T ss_pred CCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHHHH
Confidence 344433346789999997543321 124788999999999999999976665542 3677777 7777777777
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHHHhcCCC-ccEEEEeCCcCCCCcCCCCCchhhh-hHHHhh------hhCCCcccc
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYITLRQKGA-WDGLILNGAMCGISQKFKPPWPLEH-LLFTVA------WLVPTWRVV 196 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~ 196 (308)
.... +..+|.++|+|.||.+...+++.++.+ |++++++.+...+............ ....+. ..++.+...
T Consensus 175 ~~it-g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma 253 (445)
T COG3243 175 KDIT-GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMA 253 (445)
T ss_pred HHHh-CccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHH
Confidence 6653 446999999999999999988888876 9999999887776543321111111 111110 111111110
Q ss_pred cCCCCCCC--cccccHHHHHHHhh--CCC-----C---CCCcchHHHHHHHHHHH---HHh----------hhhcCCCCc
Q 035721 197 PTRGSLPM--VSFKEEWKRKLALS--SPR-----R---PVARPRAATALELLRVS---RDL----------QGRFEEVEV 251 (308)
Q Consensus 197 ~~~~~~~~--~~~~~~~~~~~~~~--~~~-----~---~~~~~~~~~~~~~~~~~---~~~----------~~~~~~i~~ 251 (308)
... .+.+ ..... .....+.. .+. . .....+......+++.. ..+ .-.+.+|+|
T Consensus 254 ~~F-~mLrpndliw~-~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~ 331 (445)
T COG3243 254 IVF-FLLRPNDLIWN-YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITC 331 (445)
T ss_pred HHH-HhcCccccchH-HHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhccc
Confidence 000 0000 00000 00000000 000 0 00111122222222111 111 123678999
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
|++++.|++|.++|.+.+....+.+++ +++++..+ +||.-.
T Consensus 332 pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~ 372 (445)
T COG3243 332 PVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAG 372 (445)
T ss_pred ceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEE
Confidence 999999999999999999999988864 46666555 999877
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.7e-12 Score=87.49 Aligned_cols=156 Identities=15% Similarity=0.062 Sum_probs=103.4
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
+.+|++||+.++....|+...+. +. -.+-.+++. ... ....++|++.+.+.+... .+ +++||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~--~l-~~a~rveq~-------~w~-~P~~~dWi~~l~~~v~a~-~~-----~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWES--AL-PNARRVEQD-------DWE-APVLDDWIARLEKEVNAA-EG-----PVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHh--hC-ccchhcccC-------CCC-CCCHHHHHHHHHHHHhcc-CC-----CeEEEE
Confidence 45899999998876455433221 11 112222221 011 126677777777776665 22 799999
Q ss_pred echhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhh
Q 035721 139 ESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALS 218 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (308)
||+|+..+++++.+....|.|+++++|+..-........ ...
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~--------------------------~~t------------ 107 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH--------------------------LMT------------ 107 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCccccccchhh--------------------------ccc------------
Confidence 999999999999988779999999999643221000000 000
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 219 SPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+. .....+.-|.+++.+.+|++++++.++.+++.+ ++.++...++||..-
T Consensus 108 ---------------------f~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~ 158 (181)
T COG3545 108 ---------------------FDP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINA 158 (181)
T ss_pred ---------------------cCC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccch
Confidence 000 111234568999999999999999999999998 578999999999765
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-13 Score=103.10 Aligned_cols=232 Identities=18% Similarity=0.135 Sum_probs=132.4
Q ss_pred CcEEEEEEecCCCCCC-----CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC--cCCCCcccc-----CC
Q 035721 41 GLRLFTQWWTPLPPAK-----TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH--GFSDGLVAH-----IP 108 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~-----~~ 108 (308)
+.++....+.+..... ..|+|++-||.++... -+..+++.|++.||.|.+++++|. |........ ..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 4566666666655433 5799999999998876 457899999999999999999984 333221111 01
Q ss_pred CcchHHHHHHHHHHHHHHh---c--C---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 109 DLNPVVEDAISFFDSFRAR---H--A---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~---~--~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.+.+...|+..+|+.+... . . +..+|.++|||+||+.++.++....+-.....-|....... ........
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~--~~~~~~~~ 205 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC--LDPPGLNG 205 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc--cCCCCcCh
Confidence 2335567888888887665 2 1 67899999999999999988876543111111111000000 00000000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
. .+..-...+. ......++++..+......+..... .. ...+.++++|++++.|..
T Consensus 206 ~---~l~q~~av~~------~~~~~~~rDpriravvA~~p~~~~~--------------Fg-~tgl~~v~~P~~~~a~s~ 261 (365)
T COG4188 206 R---LLNQCAAVWL------PRQAYDLRDPRIRAVVAINPALGMI--------------FG-TTGLVKVTDPVLLAAGSA 261 (365)
T ss_pred h---hhcccccccc------chhhhccccccceeeeeccCCcccc--------------cc-cccceeeecceeeecccc
Confidence 0 0000000000 0011111222211111111111000 00 245778999999999999
Q ss_pred CcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 261 DVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 261 D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
|.+.|+. .....+..+++....+..++++.|+-+ +..++
T Consensus 262 D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 262 DGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred cccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 9987764 455556667555558899999999998 65554
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=7e-12 Score=109.21 Aligned_cols=209 Identities=18% Similarity=0.149 Sum_probs=131.7
Q ss_pred CCcEEEEEEecCCCC--CCCcceEEEEccCCCccc---hHHHHHHH-HHHHcCCeEEEecCCCCcCCCCccccC--CCc-
Q 035721 40 RGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS---WIVQLTAV-LFAKSGFATCAIDHQGHGFSDGLVAHI--PDL- 110 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~---~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~- 110 (308)
+|....+....|++- .++-|.+|.+||.+++.. .+-..+.. .....|+.|+.+|.||.|......... ..+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 898999998888653 234578888999886322 01112333 355679999999999988765421100 001
Q ss_pred chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcC-CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 111 NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQK-GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
...++|...+++.+....- |..++.|+|+|+||.+++.++...+ +-+++.+.++|...+. .... ....+.
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds-~~tery------ 657 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDS-TYTERY------ 657 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecc-cccHhh------
Confidence 1124555555555444333 7779999999999999999999998 4566669999976643 1100 000000
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce-EEEeeCCCcccChH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM-LICHGGDDVVCDPA 267 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~ 267 (308)
+ ........ .+.+ ......+..++.|. |++||+.|..++.+
T Consensus 658 -m----------g~p~~~~~------~y~e---------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q 699 (755)
T KOG2100|consen 658 -M----------GLPSENDK------GYEE---------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQ 699 (755)
T ss_pred -c----------CCCccccc------hhhh---------------------ccccchhhhhccCCEEEEEcCCcCCcCHH
Confidence 0 00000000 0000 11223345555565 99999999999999
Q ss_pred HHHHHHHHhcCC--CCcEEEecCCccccc
Q 035721 268 CVEELYKRAASK--DKTLSIYPGMWHQLI 294 (308)
Q Consensus 268 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 294 (308)
++..+.+++... ..++.++|+.+|.+.
T Consensus 700 ~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 700 QSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred HHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 999999888643 378899999999988
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.5e-12 Score=93.95 Aligned_cols=167 Identities=14% Similarity=0.081 Sum_probs=82.9
Q ss_pred CcceEEEEccCCCccchHH---HHHHHHHHHcCCeEEEecCCC-----CcCCCC---------ccccCC----------C
Q 035721 57 TLGVLCVVHGFTGESSWIV---QLTAVLFAKSGFATCAIDHQG-----HGFSDG---------LVAHIP----------D 109 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~G-----~G~s~~---------~~~~~~----------~ 109 (308)
+++-||++||++.+...+- ..+.+.|.+.++..+.+|-|- -|-... .....+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3778999999999987442 245566655369998888542 111110 000000 1
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
...+.+.+..+.+.+.... .=..|+|+|.||.+|..++... ...++.+|++++........
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~-------- 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY-------- 151 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G--------
T ss_pred ccCHHHHHHHHHHHHHhcC---CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh--------
Confidence 1222333333344444432 1356999999999999887532 12478899988854322100
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.... .-..+++|+|-|+|++|
T Consensus 152 ----------------------------------------------------------~~~~-~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 152 ----------------------------------------------------------QELY-DEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------------TTTT---TT---EEEEEEETT-
T ss_pred ----------------------------------------------------------hhhh-ccccCCCCeEEEEeCCC
Confidence 0000 12467899999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCcccccC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 295 (308)
.+++++.++.+.+.+... .+++..+ +||.+..
T Consensus 173 ~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~ 204 (212)
T PF03959_consen 173 PVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPR 204 (212)
T ss_dssp SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS---
T ss_pred CCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcC
Confidence 999999999999998422 5555555 8898883
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.4e-12 Score=104.05 Aligned_cols=137 Identities=17% Similarity=0.150 Sum_probs=107.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEc--cCCCccchH--HHHHHH---HHHHcCCeEEEecCCCCcCCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVH--GFTGESSWI--VQLTAV---LFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~h--G~~~~~~~~--~~~~~~---~l~~~g~~v~~~d~~G~G~s~ 101 (308)
+......+++.||++|+..+|.|.+. .+.|+++..+ .+.-....+ .....+ .++.+||.|+..|.||.|.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 44456789999999999999999876 6789999988 332221001 122334 588899999999999999999
Q ss_pred CccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 102 GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 102 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+......+ .-++|-.+.|+++..+.+...+|..+|.|++|...+.+|...|..+++++-..+...
T Consensus 96 G~~~~~~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 96 GVFDPESS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccceecc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 97665444 346777788888887666778999999999999999999999988999997777655
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-11 Score=100.93 Aligned_cols=136 Identities=24% Similarity=0.223 Sum_probs=93.1
Q ss_pred ccceeEEcCC---CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH-----------H-------HHHcCCeE
Q 035721 31 HSSEYITNSR---GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV-----------L-------FAKSGFAT 89 (308)
Q Consensus 31 ~~~~~~~~~~---g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------~-------l~~~g~~v 89 (308)
....++...+ +..++|..+.........|+||+++|.+|.+. .+..+.+ . +.+ -..+
T Consensus 47 ~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~ 124 (462)
T PTZ00472 47 QWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNN-EAYV 124 (462)
T ss_pred ceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCccccc-ccCe
Confidence 3445555432 57899988886655567899999999988776 3222110 1 222 2678
Q ss_pred EEecCC-CCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc----------CC
Q 035721 90 CAIDHQ-GHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ----------KG 155 (308)
Q Consensus 90 ~~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~----------p~ 155 (308)
+.+|.| |+|.|..... ...+.++.++|+..+++.+-.+.. ...+++|+|+|+||..+..+|.+. +-
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 999975 8888876432 223557789999999987754432 457999999999999887777652 12
Q ss_pred CccEEEEeCCcCC
Q 035721 156 AWDGLILNGAMCG 168 (308)
Q Consensus 156 ~v~~~vl~~~~~~ 168 (308)
.++++++-++...
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 4789988887654
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=91.59 Aligned_cols=126 Identities=14% Similarity=0.063 Sum_probs=77.7
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCc-ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCc---CCCC-cc---c
Q 035721 36 ITNSRGLRLFTQWWTPLPPA--KTL-GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHG---FSDG-LV---A 105 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~--~~~-~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G---~s~~-~~---~ 105 (308)
.....|.+|.|+.|.|++-+ +.. |.|||+||.+..+..- ....+. |.--++.+.+-.+ .++. .. .
T Consensus 166 ~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn---~~~l~s--g~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 166 YDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDN---DKVLSS--GIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred eccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchh---hhhhhc--CccceeeecccCceEEEcccccccccc
Confidence 34457889999999996532 223 8999999998766522 111221 2223333333222 0100 00 0
Q ss_pred cCCCcchHHHHHHHHHH-HHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 106 HIPDLNPVVEDAISFFD-SFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~-~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
..............+++ .+...+. +..+|.++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 00011222333334443 5555555 8889999999999999999999999999999999874
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.6e-12 Score=88.85 Aligned_cols=191 Identities=10% Similarity=0.056 Sum_probs=123.0
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 119 (308)
.-...+|++... .+..||+||.-. +.... -..+..+.++||+|..+++ +.+.. . .++++.+.++..
T Consensus 55 ~q~VDIwg~~~~---~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY---~l~~q--~--htL~qt~~~~~~ 123 (270)
T KOG4627|consen 55 RQLVDIWGSTNQ---AKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGY---NLCPQ--V--HTLEQTMTQFTH 123 (270)
T ss_pred ceEEEEecCCCC---ccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEecc---CcCcc--c--ccHHHHHHHHHH
Confidence 556778888654 889999999632 22112 2455666678999999875 33322 1 266777777777
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccC
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPT 198 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (308)
.++++.+.......+.+-|||.|+.+|..+..+ +..+|.+++++++...+.+.......
T Consensus 124 gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g-------------------- 183 (270)
T KOG4627|consen 124 GVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG-------------------- 183 (270)
T ss_pred HHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc--------------------
Confidence 777776654344467788999999999877655 44589999998886543311100000
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS 278 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 278 (308)
........+ . .........+..+++|++++.|++|.---.+..+.+...+
T Consensus 184 --~dlgLt~~~--a------------------------e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-- 233 (270)
T KOG4627|consen 184 --NDLGLTERN--A------------------------ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-- 233 (270)
T ss_pred --cccCcccch--h------------------------hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh--
Confidence 000000000 0 0001112345678999999999999765578888888888
Q ss_pred CCCcEEEecCCccccc
Q 035721 279 KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~ 294 (308)
..+++..+++.+|+-.
T Consensus 234 ~~a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 234 RKASFTLFKNYDHYDI 249 (270)
T ss_pred hhcceeecCCcchhhH
Confidence 4689999999999865
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.5e-11 Score=97.30 Aligned_cols=216 Identities=15% Similarity=0.107 Sum_probs=135.5
Q ss_pred cceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc----hHH--HHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS----WIV--QLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~----~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
+...+....|..++..++.|.+- .++-|+|+++-|.++-.. +-+ .--...|+..||.|+++|-||.......
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 44556777889999999998764 245789999999876321 001 0114567888999999999996544321
Q ss_pred cc-------cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC
Q 035721 104 VA-------HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK 174 (308)
Q Consensus 104 ~~-------~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~ 174 (308)
.. .....++.+ +-++.+..+.+ +..+|.|-|||+||++++....++|+-++..|.-+|......
T Consensus 694 FE~~ik~kmGqVE~eDQV----eglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~--- 766 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQV----EGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL--- 766 (867)
T ss_pred hHHHHhhccCeeeehhhH----HHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee---
Confidence 11 011334444 44444444443 777999999999999999999999998888886666433210
Q ss_pred CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceE
Q 035721 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPML 254 (308)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 254 (308)
.+....+.+...+......-..... ....+.++.-.-..|
T Consensus 767 ---------------------------------YDTgYTERYMg~P~~nE~gY~agSV-------~~~VeklpdepnRLl 806 (867)
T KOG2281|consen 767 ---------------------------------YDTGYTERYMGYPDNNEHGYGAGSV-------AGHVEKLPDEPNRLL 806 (867)
T ss_pred ---------------------------------ecccchhhhcCCCccchhcccchhH-------HHHHhhCCCCCceEE
Confidence 0000011111111000000000000 112233444455689
Q ss_pred EEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 255 ICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 255 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
++||--|.-|...+...+...+. ++.-++.++|+--|.+-
T Consensus 807 LvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR 848 (867)
T KOG2281|consen 807 LVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIR 848 (867)
T ss_pred EEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccC
Confidence 99999999999988888877774 24569999999999887
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-11 Score=88.53 Aligned_cols=116 Identities=22% Similarity=0.115 Sum_probs=85.5
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~ 124 (308)
...++.|... ..-|+|+|+||+.-... ++..+..+++.+||.|+++++-..-. + +-.+.+++..++++++
T Consensus 34 pLlI~tP~~~-G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p-----~~~~Ei~~aa~V~~WL 103 (307)
T PF07224_consen 34 PLLIVTPSEA-GTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---P-----DGQDEIKSAASVINWL 103 (307)
T ss_pred CeEEecCCcC-CCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---C-----CchHHHHHHHHHHHHH
Confidence 3444556554 56899999999987766 66889999999999999999874211 1 2233356666667766
Q ss_pred HHhc--------C-CCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCC
Q 035721 125 RARH--------A-PDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGIS 170 (308)
Q Consensus 125 ~~~~--------~-~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~ 170 (308)
.... . +..++.++|||.||..|..+|..+. -.+.++|.++|..+..
T Consensus 104 ~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 104 PEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 5431 0 5678999999999999999998774 3588999999876644
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.5e-11 Score=84.26 Aligned_cols=174 Identities=16% Similarity=0.036 Sum_probs=106.3
Q ss_pred CcceEEEEccCCCccchHH---HHHHHHHHHcCCeEEEecCCC----CcCCCC--------cc------ccCC-------
Q 035721 57 TLGVLCVVHGFTGESSWIV---QLTAVLFAKSGFATCAIDHQG----HGFSDG--------LV------AHIP------- 108 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~G----~G~s~~--------~~------~~~~------- 108 (308)
.++-|||+||+..+...+- ..+.+.|.+. +..+.+|-|- -+.++. +. ...+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4677999999998876441 2455666665 7888888662 111111 00 0000
Q ss_pred -CcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcC--------CCccEEEEeCCcCCCCcCCCCCch
Q 035721 109 -DLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQK--------GAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 109 -~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p--------~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
.....-+-+..+.+++..+. ++ .|+|+|.|+.++..++...+ ..++-+|++++......
T Consensus 83 ~~~~~~eesl~yl~~~i~enG----PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~------- 151 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG----PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK------- 151 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC----CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc-------
Confidence 01111223444555555543 43 59999999999998887221 12566777776432110
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
. .+.....+.+++|.|-|.|
T Consensus 152 ---------------------------~---------------------------------~~~~~~~~~i~~PSLHi~G 171 (230)
T KOG2551|consen 152 ---------------------------K---------------------------------LDESAYKRPLSTPSLHIFG 171 (230)
T ss_pred ---------------------------h---------------------------------hhhhhhccCCCCCeeEEec
Confidence 0 0111234578999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.|.+++.+.+..+++.+ ++..+.. ..+||.+. .. .+.+.+.++
T Consensus 172 ~~D~iv~~~~s~~L~~~~--~~a~vl~-HpggH~VP~~~--~~~~~i~~f 216 (230)
T KOG2551|consen 172 ETDTIVPSERSEQLAESF--KDATVLE-HPGGHIVPNKA--KYKEKIADF 216 (230)
T ss_pred ccceeecchHHHHHHHhc--CCCeEEe-cCCCccCCCch--HHHHHHHHH
Confidence 999999999999999999 4554444 44899998 44 345555544
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.2e-10 Score=81.16 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=135.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc-C--CeEEEecCCCCcCCCC--------ccccCCCcchHHHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS-G--FATCAIDHQGHGFSDG--------LVAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~d~~~~l~~~ 124 (308)
..++.+++++|.+|... |+..++..|..+ + ..++.+...||-.-+. .....+++++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 45889999999999988 667888887654 2 5589998888865441 1112345666666655665543
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCC
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL 202 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (308)
.- .+.+++++|||.|+++.+....... -.|.+++++-|...--......+.....+..+....... .+
T Consensus 106 ~P---k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt-------~y 175 (301)
T KOG3975|consen 106 VP---KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLT-------SY 175 (301)
T ss_pred CC---CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhhee-------ee
Confidence 22 4569999999999999999887433 347777777664332111111111111111111000000 00
Q ss_pred CCcccccHHHHHHHhhCCCCCCC--------------cchHHHH-----HHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 203 PMVSFKEEWKRKLALSSPRRPVA--------------RPRAATA-----LELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~-----~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
.-..+...+.+........+... ....+.. .++..-.....+.+++-.+-+.+.+|..|.+
T Consensus 176 i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00000011111111111000000 0000000 1111111112233455567889999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
||.+....+.+.++..++++-+ +++.|.+. .+.+..++.+.+-
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHh
Confidence 9999999999999765677766 78999999 8888777777653
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-11 Score=98.27 Aligned_cols=110 Identities=22% Similarity=0.247 Sum_probs=63.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCC------CCc---cc---------------cCCC--
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFS------DGL---VA---------------HIPD-- 109 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s------~~~---~~---------------~~~~-- 109 (308)
.+-|+|||-||++++... +..++..|+.+||.|+++|+|..-.. +.. .. ....
T Consensus 98 ~~~PvvIFSHGlgg~R~~-yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS-YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTT-THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhh-HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 457999999999999874 47899999999999999999953211 000 00 0000
Q ss_pred --------cchHHHHHHHHHHHHHHhc-------------------C--CCCCEEEEEechhhHHHHHHHHhcCCCccEE
Q 035721 110 --------LNPVVEDAISFFDSFRARH-------------------A--PDLPAFLYSESLGGAIALYITLRQKGAWDGL 160 (308)
Q Consensus 110 --------~~~~~~d~~~~l~~~~~~~-------------------~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 160 (308)
++.-+.++..+++.+..-. + +..++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0111345666666554210 0 245799999999999999888877 579999
Q ss_pred EEeCCcC
Q 035721 161 ILNGAMC 167 (308)
Q Consensus 161 vl~~~~~ 167 (308)
|+++++.
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999964
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.4e-12 Score=93.39 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 115 EDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
+-+..+++++..... +..+|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE---
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcC
Confidence 345667777776644 5679999999999999999999999 6999999998655432211000000 000000
Q ss_pred ccccCCCCC-CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHH
Q 035721 194 RVVPTRGSL-PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEE 271 (308)
Q Consensus 194 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~ 271 (308)
......... ................ . ......-.+.++++|+|+|.|++|.+.|... ++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~ 137 (213)
T PF08840_consen 76 PFDISKFSWNEPGLLRSRYAFELADD---K---------------AVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQ 137 (213)
T ss_dssp -B-GGG-EE-TTS-EE-TT-B--TTT---G---------------GGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred CcChhhceecCCcceehhhhhhcccc---c---------------ccccccccHHHcCCCEEEEEeCCCCccchHHHHHH
Confidence 000000000 0000000000000000 0 0000112356789999999999999998654 445
Q ss_pred HHHHhcC---C-CCcEEEecCCccccc
Q 035721 272 LYKRAAS---K-DKTLSIYPGMWHQLI 294 (308)
Q Consensus 272 ~~~~~~~---~-~~~~~~~~~~gH~~~ 294 (308)
+.+++.. + +.+.+.|+++||.+.
T Consensus 138 i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 138 IEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp HHHHHHCTT-----EEEEETTB-S---
T ss_pred HHHHHHHhCCCCcceEEEcCCCCceec
Confidence 5555542 2 468889999999975
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-10 Score=110.19 Aligned_cols=100 Identities=18% Similarity=0.102 Sum_probs=81.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.++++++||++++.. .|..+.+.|.. ++.|++++.+|++.+.. ..++++++++++.+.++.+.. ..+++++
T Consensus 1068 ~~~l~~lh~~~g~~~-~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~----~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-QFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP----HGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCchH-HHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC----CCCEEEE
Confidence 467999999998876 67889998865 59999999999986532 225889999999888876543 2389999
Q ss_pred EechhhHHHHHHHHh---cCCCccEEEEeCCc
Q 035721 138 SESLGGAIALYITLR---QKGAWDGLILNGAM 166 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~ 166 (308)
|||+||.+|..+|.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999986 46789999998874
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.6e-11 Score=88.17 Aligned_cols=107 Identities=17% Similarity=0.096 Sum_probs=70.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHH--------cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAK--------SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH 128 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 128 (308)
.+.+|||+||.+++.. .++.+...+.+ ..++++++|+......-. . ..+.+..+-+.+.++.+....
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhh
Confidence 3678999999988876 44566655522 147899999876432111 1 133344444444554443322
Q ss_pred ----CCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCC
Q 035721 129 ----APDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCG 168 (308)
Q Consensus 129 ----~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~ 168 (308)
.+..+++++||||||.+|-.++...+ +.|+.+|.++++..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 16789999999999999888776543 47999999887643
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-10 Score=85.47 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=117.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHH-HcCCe----EEEecCCCC----cCCCC----c------cccC-CCcchHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFA-KSGFA----TCAIDHQGH----GFSDG----L------VAHI-PDLNPVVED 116 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~g~~----v~~~d~~G~----G~s~~----~------~~~~-~~~~~~~~d 116 (308)
...+.||+||++++.. .+..++..+. ++|.. ++.++.-|. |.=.. + .... .+....+..
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 3567999999999877 4478999997 55542 344444443 21111 0 0011 245567889
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCC
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVP 191 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (308)
+..++..|..++ .-.++-+|||||||..++.++..+.. ++..+|.+++++............ .
T Consensus 89 l~~vl~~L~~~Y-~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~-------~---- 156 (255)
T PF06028_consen 89 LKKVLKYLKKKY-HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ-------N---- 156 (255)
T ss_dssp HHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT-------T----
T ss_pred HHHHHHHHHHhc-CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh-------h----
Confidence 999999998887 77799999999999999999887532 589999998865532111100000 0
Q ss_pred CcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeC------CCccc
Q 035721 192 TWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGG------DDVVC 264 (308)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~------~D~~~ 264 (308)
.+.... +.. ....+...... ...+ .-.+.+|-|.|. .|..|
T Consensus 157 ---------~~~~~g-------------------p~~---~~~~y~~l~~~~~~~~-p~~i~VLnI~G~~~~g~~sDG~V 204 (255)
T PF06028_consen 157 ---------DLNKNG-------------------PKS---MTPMYQDLLKNRRKNF-PKNIQVLNIYGDLEDGSNSDGIV 204 (255)
T ss_dssp ----------CSTT--------------------BSS-----HHHHHHHHTHGGGS-TTT-EEEEEEEESBTTCSBTSSS
T ss_pred ---------hhcccC-------------------Ccc---cCHHHHHHHHHHHhhC-CCCeEEEEEecccCCCCCCCeEE
Confidence 000000 000 00111111111 1222 225789999999 89999
Q ss_pred ChHHHHHHHHHhcC--CCCcEEEecC--Cccccc-CCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAAS--KDKTLSIYPG--MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~-~~~~~~~~~i~~~ 307 (308)
|...+..+...+.. ...+-.++.| +.|.-. +++ ++.+.|.++
T Consensus 205 ~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~F 251 (255)
T PF06028_consen 205 PNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQF 251 (255)
T ss_dssp BHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHH
T ss_pred eHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHH
Confidence 99999888888753 2345556654 689888 666 456666554
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-10 Score=80.14 Aligned_cols=177 Identities=18% Similarity=0.149 Sum_probs=111.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-----------------CccccCCCcchHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-----------------GLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 120 (308)
..+||++||.+.++. -|..+.+.|.-.+..-+++.-|-.-.+. ........+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 457999999998877 3455666665556667776443221110 0000112334445556666
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
++..-...-+.+++.+-|+|+||.+++..+..+|..+.+++..++.........
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~-------------------------- 135 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL-------------------------- 135 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc--------------------------
Confidence 655544321567899999999999999999999888888887666433110000
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS-- 278 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 278 (308)
... ....+ ..|++..||+.|+++|..-.+...+.+..
T Consensus 136 --~~~-------------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~ 174 (206)
T KOG2112|consen 136 --PGW-------------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLG 174 (206)
T ss_pred --cCC-------------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcC
Confidence 000 00001 57999999999999998766665555532
Q ss_pred CCCcEEEecCCccccc-CCchhhHH
Q 035721 279 KDKTLSIYPGMWHQLI-GEPEENVE 302 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~-~~~~~~~~ 302 (308)
..++++.+++.+|... ++-+++..
T Consensus 175 ~~~~f~~y~g~~h~~~~~e~~~~~~ 199 (206)
T KOG2112|consen 175 VRVTFKPYPGLGHSTSPQELDDLKS 199 (206)
T ss_pred CceeeeecCCccccccHHHHHHHHH
Confidence 2389999999999988 55554443
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.7e-11 Score=87.85 Aligned_cols=92 Identities=18% Similarity=0.162 Sum_probs=59.9
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCe---EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFA---TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+|||+||.+++...-|..+.+.|.++||. |+++++-....+...... ....+.++++.++++.+.... +. +|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~T-Ga-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYT-GA-KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHH-T---EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhh-CC-EEE
Confidence 369999999986655678999999999999 899998544432221111 123345688999998888764 55 999
Q ss_pred EEEechhhHHHHHHHHhc
Q 035721 136 LYSESLGGAIALYITLRQ 153 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~ 153 (308)
||||||||.++-.+....
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999998887644
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-10 Score=92.24 Aligned_cols=114 Identities=15% Similarity=0.154 Sum_probs=72.0
Q ss_pred CCcceEEEEccCCCcc-c-hHHHHHHHHHHH---cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-
Q 035721 56 KTLGVLCVVHGFTGES-S-WIVQLTAVLFAK---SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA- 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~-~-~~~~~~~~~l~~---~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~- 129 (308)
.++|++|++||+.++. . .+...+.+.+.. .++.|+++|+...-...... .........+.+..+|+.|....+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~-a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ-AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH-HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc-hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5689999999999887 2 344566665544 47999999996432211000 001233445566677777664333
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGIS 170 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~ 170 (308)
+.+++++||||+||.+|-.++..... ++..++.++|+....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 67799999999999999999988877 899999999976543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-09 Score=80.67 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=93.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH--HHHH-HcCCeEEEecCC-C------CcCCCCccccC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA--VLFA-KSGFATCAIDHQ-G------HGFSDGLVAHI 107 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~-G------~G~s~~~~~~~ 107 (308)
..+|.+..|+++.|.......|.||++||..++...+ +... +.|+ ..||-|+.+|-- + .+.+..+...
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~- 118 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR- 118 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc-
Confidence 5678889999999887655668999999998887633 2221 3343 359999999532 2 2222222111
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
..-.+-+..|.++++.+..+++ ++.+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1223346788888888888877 88899999999999999999999999999988887755
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.1e-09 Score=80.56 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc---C--CCCCEEEEEechhhHHHHHHH
Q 035721 76 QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH---A--PDLPAFLYSESLGGAIALYIT 150 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~---~--~~~~~~l~G~S~Gg~~a~~~a 150 (308)
..++..+.++||.|+++|+.|.|..- ..-...+..+.+.++..+... + ...++.++|||.||..++..+
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y------~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPY------LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCcc------cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 35566677889999999999999711 122333444555554444321 1 246899999999999887666
Q ss_pred Hhc----CC-C--ccEEEEeCCcCC
Q 035721 151 LRQ----KG-A--WDGLILNGAMCG 168 (308)
Q Consensus 151 ~~~----p~-~--v~~~vl~~~~~~ 168 (308)
... || . +.+.++.++...
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccC
Confidence 443 33 2 677777676554
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.2e-11 Score=89.35 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=84.5
Q ss_pred cceeEEcCCCcEEEEEEec--CCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWT--PLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
+...+.+.||.+|...... |......+..|||+-|..+-.+. .+..-=.+.||.|+.+++||++.|.+.+....+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~ 291 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNT 291 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcccc
Confidence 3445667777665542221 11111236688888887765441 222223356899999999999999987654323
Q ss_pred cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 110 LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ..+.++++..-...+ ..+.++++|+|.||.-+..+|..+|+ |+++|+-+++-.
T Consensus 292 ~----nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 292 L----NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred h----HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 2 223334433332222 66799999999999999999999997 999999887543
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-09 Score=89.49 Aligned_cols=230 Identities=12% Similarity=0.028 Sum_probs=143.2
Q ss_pred cccccccccceeEEcCCCcEEEEEEecCCC-CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 24 YARHSVSHSSEYITNSRGLRLFTQWWTPLP-PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 24 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
++..++..+..+.++.||++|.|.+.. ++ ...+.|++|+--|...-+. ..+........++|...+..+.||-|+=.
T Consensus 387 FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 387 FDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred cCccCceEEEEEEEcCCCccccEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 344566777788889999999999987 33 1125777776655433221 12233446677889999999999988755
Q ss_pred Cccc---cCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 102 GLVA---HIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 102 ~~~~---~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
+... ....-+...+|..++.+.|..+.. .++++.+.|-|-||.+.-....++|+.+.++|+-.|....-...
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh---- 541 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH---- 541 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc----
Confidence 4211 112344567899999998888754 67789999999999999999999999999998777754422100
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC--CCCcceEE
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE--EVEVPMLI 255 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~l~ 255 (308)
.......|. ..+- .+........+.....+ .+++ ..--|+||
T Consensus 542 --------------------------~l~aG~sW~-~EYG--------~Pd~P~d~~~l~~YSPy-~nl~~g~kYP~~LI 585 (648)
T COG1505 542 --------------------------LLTAGSSWI-AEYG--------NPDDPEDRAFLLAYSPY-HNLKPGQKYPPTLI 585 (648)
T ss_pred --------------------------ccccchhhH-hhcC--------CCCCHHHHHHHHhcCch-hcCCccccCCCeEE
Confidence 000000000 0000 00000000011110111 1111 12348999
Q ss_pred EeeCCCcccChHHHHHHHHHhcCCCCcEEEe--cCCccccc
Q 035721 256 CHGGDDVVCDPACVEELYKRAASKDKTLSIY--PGMWHQLI 294 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~ 294 (308)
-.+.+|.-|.|.+++.++..+...+.....+ .++||.--
T Consensus 586 TTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~ 626 (648)
T COG1505 586 TTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGA 626 (648)
T ss_pred EcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCC
Confidence 9999999999999999999986544444444 36999887
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=91.08 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=73.9
Q ss_pred chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 72 SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 72 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+.... +..+++|+||||||.++..++.
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~-g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKAS-GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHc-CCCCEEEEEECHhHHHHHHHHH
Confidence 347899999999999865 88999999886642 134666788888888776653 5679999999999999999998
Q ss_pred hcCCC----ccEEEEeCCcCC
Q 035721 152 RQKGA----WDGLILNGAMCG 168 (308)
Q Consensus 152 ~~p~~----v~~~vl~~~~~~ 168 (308)
.+|+. |+++|.++++..
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HCCHhHHhHhccEEEECCCCC
Confidence 88853 788999887654
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-08 Score=80.68 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=74.8
Q ss_pred CCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCC----eEEEecCCCCcCCCCccccCCC-cchH
Q 035721 40 RGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF----ATCAIDHQGHGFSDGLVAHIPD-LNPV 113 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~~~~~~~~-~~~~ 113 (308)
-|.+..+.+|.|++. ..+.|+|+++||.............+.|.++|. .++.+|-.+............. ...+
T Consensus 190 Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l 269 (411)
T PRK10439 190 LGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAV 269 (411)
T ss_pred cCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHH
Confidence 355667777877643 245789999999543222112244556666653 3577775321110000000001 1122
Q ss_pred HHHHHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 114 VEDAISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
++++...++. .+. +.++.+|.|+||||..|+.++.++|+++.+++.+++..
T Consensus 270 ~~eLlP~I~~---~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRA---IAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHH---hCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3444444433 322 56688999999999999999999999999999999853
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.5e-09 Score=80.56 Aligned_cols=110 Identities=16% Similarity=0.155 Sum_probs=73.3
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCC--eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGF--ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+.++||+||+..+...-....++.....++ .++.+.||+.|.-..-.....+......++..+|+.+.... +..+|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~-~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAP-GIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc-CCceE
Confidence 4789999999987755333334433333334 69999999887632211111133444567777887776653 56799
Q ss_pred EEEEechhhHHHHHHHHhc----C-----CCccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLRQ----K-----GAWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~----p-----~~v~~~vl~~~~~ 167 (308)
++++||||+.+.+...... + .++..+|+++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999998776542 1 2578889988843
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=76.12 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=79.9
Q ss_pred CcEEEEEEecCCCCC--CCcceEEEEccCCCccchHHH--HHHHHHHHcCCeEEEecCCCCcCCCCccccC---------
Q 035721 41 GLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQ--LTAVLFAKSGFATCAIDHQGHGFSDGLVAHI--------- 107 (308)
Q Consensus 41 g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--------- 107 (308)
+..+.+-+|.|+... ++-|++.++.|+.++.+.+.. .+.+.-.++|..|+.+|---.|..-......
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 456677777776642 346899999999998775432 2334445679999999954333211100000
Q ss_pred ---CCcchHHH-------HHHHHHHHHHHh-cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 108 ---PDLNPVVE-------DAISFFDSFRAR-HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 108 ---~~~~~~~~-------d~~~~l~~~~~~-~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.+.+-|+. -..++.+.+... .. +..++.|.||||||.=|+..+.+.|.+.+++-..+|....
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 01122221 112222222211 11 6678999999999999999999999999999888876553
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=7e-09 Score=73.17 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=29.3
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.++.|+|.|+||+.|..++.++. -..|+++|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 37999999999999999999986 367778886553
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.8e-09 Score=81.31 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=80.9
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
|++.++|+.+|... .|..+...|... ..|+.++.||.+.-... ..+++++++...+.|....- ..+++++|
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP----~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQP----EGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCC----CCCEEEEe
Confidence 46999999998876 668999999887 99999999999852221 23778887777777766654 44999999
Q ss_pred echhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 139 ESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
||+||.+|...|.+- .+.|..++++++...
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999998763 346999999998766
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.8e-08 Score=78.99 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 156 (308)
.+.-.|. .|+.|+.+.+. +.+....++.+.......+++.+.....+..+.+++|.|.||+.++.+|+.+|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHH-cCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 4555564 59999998875 2222234888888888888888887753333999999999999999999999999
Q ss_pred ccEEEEeCCcCCCCc
Q 035721 157 WDGLILNGAMCGISQ 171 (308)
Q Consensus 157 v~~~vl~~~~~~~~~ 171 (308)
+..+|+.+++..+..
T Consensus 165 ~gplvlaGaPlsywa 179 (581)
T PF11339_consen 165 VGPLVLAGAPLSYWA 179 (581)
T ss_pred cCceeecCCCccccc
Confidence 999999888776654
|
Their function is unknown. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-08 Score=78.03 Aligned_cols=116 Identities=17% Similarity=0.131 Sum_probs=84.0
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch--H----HHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--I----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
...+. .|+..|-.....-++. .+...||+.-|.++..+. . ...+.+.....|.+|+.+++||.|.|.+..
T Consensus 114 Rv~Iq-~D~~~IDt~~I~~~~a-~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 114 RVPIQ-YDGVKIDTMAIHQPEA-KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eEEEe-eCCEEEEEEEeeCCCC-CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 33443 4888777655543333 457889999998876553 1 022344444458999999999999998764
Q ss_pred CCCcchHHHHHHHHHHHHHHhc-C-CCCCEEEEEechhhHHHHHHHHhcC
Q 035721 107 IPDLNPVVEDAISFFDSFRARH-A-PDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~-~-~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
+.++++.|..+.++++..+. + ....+++.|||+||.++..++.++.
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 45889999999999998643 2 5579999999999999998776653
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-08 Score=75.07 Aligned_cols=86 Identities=17% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR- 152 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~- 152 (308)
.|..+...|.. .+.|++++.+|++.+.... .+.+.+++.+...+.... ...+++++|||+||.++...+.+
T Consensus 14 ~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~----~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 14 EYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA----GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc----CCCCeEEEEECHHHHHHHHHHHHH
Confidence 56788888876 4999999999998665432 245555554444333221 34489999999999999888876
Q ss_pred --cCCCccEEEEeCCcC
Q 035721 153 --QKGAWDGLILNGAMC 167 (308)
Q Consensus 153 --~p~~v~~~vl~~~~~ 167 (308)
.++.+.+++++++..
T Consensus 86 ~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 86 EARGIPPAAVVLLDTYP 102 (212)
T ss_pred HhCCCCCcEEEEEccCC
Confidence 346689999887643
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.4e-07 Score=71.47 Aligned_cols=132 Identities=16% Similarity=0.167 Sum_probs=87.3
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch--HHHHHHHHHHHcCCeEEEecCCCC--cCCCC------
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--IVQLTAVLFAKSGFATCAIDHQGH--GFSDG------ 102 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~------ 102 (308)
+......++.+ ....|.+......+.+||++||.+.+..+ ....+-..|.+.||.++++.+|.- .....
T Consensus 63 e~~~L~~~~~~-flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 63 EVQWLQAGEER-FLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred hcEEeecCCEE-EEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCC
Confidence 33333444433 33456666655678899999999988762 345788889899999999998871 10000
Q ss_pred ----cc--c-cCC-----------------CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-Cc
Q 035721 103 ----LV--A-HIP-----------------DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AW 157 (308)
Q Consensus 103 ----~~--~-~~~-----------------~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v 157 (308)
.. . ... ....+..-+.+++..+... ++.+++|+||+.|+..++.+....+. .+
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--~~~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ--GGKNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 00 0 000 0112334555555555554 55569999999999999999988774 58
Q ss_pred cEEEEeCCcC
Q 035721 158 DGLILNGAMC 167 (308)
Q Consensus 158 ~~~vl~~~~~ 167 (308)
+++|++++..
T Consensus 220 daLV~I~a~~ 229 (310)
T PF12048_consen 220 DALVLINAYW 229 (310)
T ss_pred CeEEEEeCCC
Confidence 9999999953
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.3e-08 Score=75.33 Aligned_cols=174 Identities=14% Similarity=0.164 Sum_probs=109.8
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC----cc--cc-----------CC---C------
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG----LV--AH-----------IP---D------ 109 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~~--~~-----------~~---~------ 109 (308)
.+-|+|||-||++++.. ++..++-.|+.+||.|.++++|.+..+-. +. .. .+ .
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 45699999999999887 55889999999999999999987643211 00 00 00 0
Q ss_pred --cchHHHHHHHHHHHHHHhc--------------------C--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 110 --LNPVVEDAISFFDSFRARH--------------------A--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 110 --~~~~~~d~~~~l~~~~~~~--------------------~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
...-+.++..+++-+..-. + +..++.++|||+||..++.....+. ++++.|+++.
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 0111233333333322110 0 3457899999999998887777665 5899998887
Q ss_pred cCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhh
Q 035721 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245 (308)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
+..+-. ...
T Consensus 274 WM~Pl~-----------------------------------------------------------------------~~~ 282 (399)
T KOG3847|consen 274 WMFPLD-----------------------------------------------------------------------QLQ 282 (399)
T ss_pred eecccc-----------------------------------------------------------------------hhh
Confidence 533110 122
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhc-CCCCcEEEecCCccccc-CCchhhHHHh
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAA-SKDKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
.++.+.|+++|.-++ -.. .+....+.+... +.+..+.++.|+=|..+ +.|-.+-+.|
T Consensus 283 ~~~arqP~~finv~~-fQ~-~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i 341 (399)
T KOG3847|consen 283 YSQARQPTLFINVED-FQW-NENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWI 341 (399)
T ss_pred hhhccCCeEEEEccc-ccc-hhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHH
Confidence 356678999999443 222 355555555543 23467888899999888 7665444433
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.7e-08 Score=76.83 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=74.1
Q ss_pred CcEEEEEEecCCC--CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcC----CeEEEecCCCCcCCCCc---------c
Q 035721 41 GLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSG----FATCAIDHQGHGFSDGL---------V 104 (308)
Q Consensus 41 g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~---------~ 104 (308)
|....+.++.|.+ ...+-|+|+++||...... .-.....+.+...| ..+++++..+.+..... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 4566777787776 4466799999999622111 11122333333432 34566665554411100 0
Q ss_pred -ccCCCcchHHHHH-HHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 105 -AHIPDLNPVVEDA-ISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 105 -~~~~~~~~~~~d~-~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
........+.+.+ .+++..+..... ...+..|+|+||||..|+.++.++|+.+.+++.++|...
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 0000111111211 234444444443 222389999999999999999999999999999998644
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-08 Score=82.63 Aligned_cols=163 Identities=16% Similarity=0.218 Sum_probs=108.0
Q ss_pred CcceEEEEccCC-C--ccchHHHHHHHHHHHcC--CeEEEecCCCC-cCCCCccccCCCcchHHHHHHHHHHHHHHh--c
Q 035721 57 TLGVLCVVHGFT-G--ESSWIVQLTAVLFAKSG--FATCAIDHQGH-GFSDGLVAHIPDLNPVVEDAISFFDSFRAR--H 128 (308)
Q Consensus 57 ~~~~vv~~hG~~-~--~~~~~~~~~~~~l~~~g--~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~--~ 128 (308)
..|.++++||.+ . +++++| .+...|...| ..|.++|++.- |. .++...++.+..+.+....+ .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~-~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMW-SWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHH-hHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhc
Confidence 368899999987 1 222232 3334443333 45667777631 21 25555666666666533222 1
Q ss_pred C-CCCCEEEEEechhhHHHHHHHHhcC-CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcc
Q 035721 129 A-PDLPAFLYSESLGGAIALYITLRQK-GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 129 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (308)
. ...+++|+|.|||+.++.+.+...- ..|+++|+++-........ ..
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp-------------------------------rg 294 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP-------------------------------RG 294 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-------------------------------cC
Confidence 1 6779999999999988888776544 3488888877543321100 01
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEe
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (308)
.+ .+.+-.++.|+|||.|..|..++++..+.+.+++.. ..+++++
T Consensus 295 ir----------------------------------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI 339 (784)
T KOG3253|consen 295 IR----------------------------------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVI 339 (784)
T ss_pred Cc----------------------------------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEe
Confidence 11 133445788999999999999999999999999974 6899999
Q ss_pred cCCccccc
Q 035721 287 PGMWHQLI 294 (308)
Q Consensus 287 ~~~gH~~~ 294 (308)
.+++|.+-
T Consensus 340 ~~adhsma 347 (784)
T KOG3253|consen 340 GGADHSMA 347 (784)
T ss_pred cCCCcccc
Confidence 99999887
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.4e-07 Score=78.48 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=96.6
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
..+..+..+.+..||.++...+.-..+ -..+.|++|..-|.-+.+. ..+....-.|.++|+.-...--||-|.-...
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 344556677777899988887765543 2245777777777544432 2223333346678887666677886654431
Q ss_pred c---ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 104 V---AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 104 ~---~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
. +....-..-..|..+..++|..... ....++++|-|.||++.-..+...|+.++++|+-.|+.....
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhh
Confidence 1 1111112224566677777766543 667999999999999999999999999999999999877543
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.1e-08 Score=69.42 Aligned_cols=108 Identities=10% Similarity=0.040 Sum_probs=79.8
Q ss_pred cceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
+-.|||+-|++..-- .+.+.+...|-+.+|.++-+.++.+- ..-...++.+-++|+..+++++.... ...+|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~slk~D~edl~~l~~Hi~~~~-fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTFSLKDDVEDLKCLLEHIQLCG-FSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccccccccHHHHHHHHHHhhccC-cccceE
Confidence 456899999876432 35678899999999999999876321 10111377788999999999887653 455999
Q ss_pred EEEechhhHHHHHHHHh--cCCCccEEEEeCCcCCCC
Q 035721 136 LYSESLGGAIALYITLR--QKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~ 170 (308)
++|||.|+.-.+.|..+ .+..+.+.|+.+|.....
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999988888733 345688888888876543
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.4e-07 Score=68.18 Aligned_cols=222 Identities=15% Similarity=0.020 Sum_probs=116.9
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEE
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYS 138 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G 138 (308)
++|++=|+.+..........+...+.|+.++.+-.+-.....+. ......+..+++.+..... ...++.+-.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-------KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-------cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 36777787766554555666667778999999876532211111 2223333334444443321 223899999
Q ss_pred echhhHHHHHHHHh-----c-----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccc
Q 035721 139 ESLGGAIALYITLR-----Q-----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~-----~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+|.||...+..... . -.+++++|+-+++...... ..........+.... . .. ...
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~--------~~~~~~~~~~~~~~~---~-~~---~~~ 138 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYS--------SSARAFSAALPKSSP---R-WF---VPL 138 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccc--------cHHHHHHHHcCccch---h-hH---HHH
Confidence 99988876654331 1 1348899987775433210 011111111111100 0 00 000
Q ss_pred cHHHHHH---HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcE
Q 035721 209 EEWKRKL---ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTL 283 (308)
Q Consensus 209 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~ 283 (308)
....... .................... ..+ .......+|-++++++.|.+++.+..++..+.... .+++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~ 213 (240)
T PF05705_consen 139 WPLLQFLLRLSIISYFIFGYPDVQEYYRRA---LND--FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRA 213 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHH---Hhh--hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEE
Confidence 0000000 00000000000000001111 011 11234468999999999999999998888777642 34788
Q ss_pred EEecCCccccc--CCchhhHHHhhhcC
Q 035721 284 SIYPGMWHQLI--GEPEENVELVFGEM 308 (308)
Q Consensus 284 ~~~~~~gH~~~--~~~~~~~~~i~~~i 308 (308)
..++++.|.-+ .+|++..+.+.+++
T Consensus 214 ~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 214 EKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred ecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 88899999999 99999999988753
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.1e-08 Score=82.73 Aligned_cols=145 Identities=10% Similarity=0.021 Sum_probs=99.8
Q ss_pred ccccccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 25 ARHSVSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 25 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
....+..+..++.+.||..+.-.+...+.. ..++|.+|..+|.-+-+ ...|+.--..|.+.|+.....|.||-|+-.
T Consensus 435 ~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G 514 (712)
T KOG2237|consen 435 DASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYG 514 (712)
T ss_pred cccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccc
Confidence 344556677788899999887766654332 23678888777754432 223333333355689999999999977543
Q ss_pred Cc---cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 102 GL---VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 102 ~~---~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.. .+....-....+|..+..+.|-.... .+.+..+.|.|.||.++..+..++|+.+.++|+-.|+...
T Consensus 515 ~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 515 EQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred cchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 31 11111223345777777787776644 7789999999999999999999999999999988887653
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-07 Score=73.02 Aligned_cols=112 Identities=18% Similarity=0.143 Sum_probs=77.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCC--eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF--ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
..+.++||+||+..+-..-....++.....|+ ..+.+.||..|.--.-.....+...-..++..+|+.+.... ...+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~-~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK-PVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-CCce
Confidence 34779999999987654233345666655554 57788899777533221111234445678899999998774 5678
Q ss_pred EEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcCC
Q 035721 134 AFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMCG 168 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~ 168 (308)
|+|++||||.+++++...+. +.+++-+|+.+|-.+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999999877642 346788888888544
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.3e-08 Score=83.33 Aligned_cols=123 Identities=17% Similarity=0.123 Sum_probs=77.0
Q ss_pred EEEEEEecCCCC--CCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCC-C---CcCCCCccccCCCcchHH
Q 035721 43 RLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQ-G---HGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 43 ~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~ 114 (308)
-|+..+|.|... ..+.|+||++||.+.....-.......|... |+.|+.+++| | +..+... ......-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchhH
Confidence 456666777643 3467999999996533221000122344443 3899999999 3 2222111 01222335
Q ss_pred HHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 115 EDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 115 ~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
.|...++++++.. .+ ++.+|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 6777777777653 23 78899999999999998887765 2356888998877544
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.7e-06 Score=66.35 Aligned_cols=127 Identities=15% Similarity=0.125 Sum_probs=80.6
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccc-------------
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVA------------- 105 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------------- 105 (308)
..+|.|+..-.+.. ..+..|+++.|+|++.. .+.+.+.+.++++ +..|+.+++-|+|.......
T Consensus 19 ~sKLEyri~ydd~K-e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 19 ESKLEYRISYDDEK-EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred cceeeEEeecCCCC-CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 34677877544332 45788999999999876 3556777888876 33455567777664321000
Q ss_pred -----------cCCC---cc-------------------------------------------hHHHHHHHHHHHHHHhc
Q 035721 106 -----------HIPD---LN-------------------------------------------PVVEDAISFFDSFRARH 128 (308)
Q Consensus 106 -----------~~~~---~~-------------------------------------------~~~~d~~~~l~~~~~~~ 128 (308)
...+ .. ..|-|+..++..+....
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0000 00 01123334443343333
Q ss_pred C---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 129 A---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 129 ~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ++.|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 2 235999999999999999999999999999987776544
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.3e-07 Score=65.26 Aligned_cols=244 Identities=12% Similarity=0.011 Sum_probs=126.4
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHH-HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH---
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ-LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI--- 118 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~--- 118 (308)
+-++..+.|.. ..+.-+.+-|.+.+.. +-+ .+...+.++|...+.+.-|-+|...++.... ..-+++.|+.
T Consensus 101 ~A~~~~liPQK---~~~KOG~~a~tgdh~y-~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~-~~Le~vtDlf~mG 175 (371)
T KOG1551|consen 101 TARVAWLIPQK---MADLCLSWALTGDHVY-TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQII-HMLEYVTDLFKMG 175 (371)
T ss_pred ceeeeeecccC---cCCeeEEEeecCCcee-EeeeeecCchhhhcchheeeecccccccCCHHHHH-HHHHHHHHHHHhh
Confidence 33444455532 2455555555554432 212 3556666778999999999999876644322 2222233332
Q ss_pred -HHHHHHHHhc----C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 119 -SFFDSFRARH----A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 119 -~~l~~~~~~~----~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
+.|++..... . +..+..++|-||||.+|......++..|.-+=++++......... ..... ....+.+....
T Consensus 176 ~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~te-g~l~~-~~s~~~~~~~~ 253 (371)
T KOG1551|consen 176 RATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATE-GLLLQ-DTSKMKRFNQT 253 (371)
T ss_pred HHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhh-hhhhh-hhHHHHhhccC
Confidence 2222222111 1 567999999999999999999988766655544444322111000 00011 11111111111
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-----eEEEeeCCCcccChH
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-----MLICHGGDDVVCDPA 267 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~~~~ 267 (308)
.... ...+..-...+.. .. +.. ...+-.....+++..-+-...+.+..+| +.++.+++|..+|..
T Consensus 254 t~~~----~~~~r~p~Q~~~~-~~-~~~----srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~ 323 (371)
T KOG1551|consen 254 TNKS----GYTSRNPAQSYHL-LS-KEQ----SRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRT 323 (371)
T ss_pred cchh----hhhhhCchhhHHH-HH-HHh----hhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcccccc
Confidence 0000 0000000000000 00 000 0111222233333222212233444444 678899999999998
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhh
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFG 306 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~ 306 (308)
.+..+.+.+ |++++..++ +||..- .+.+.+..+|.+
T Consensus 324 gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d 361 (371)
T KOG1551|consen 324 GVRSLQEIW--PGCEVRYLE-GGHVSAYLFKQDLFRRAIVD 361 (371)
T ss_pred CcHHHHHhC--CCCEEEEee-cCceeeeehhchHHHHHHHH
Confidence 899999999 789999999 889866 777777777654
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.3e-07 Score=74.12 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=72.6
Q ss_pred cceEEEEccCCCccchH--HHHHHHHHHHc-CCeEEEecCCCCcCCCCccc------cCCCcchHHHHHHHHHHHHHHhc
Q 035721 58 LGVLCVVHGFTGESSWI--VQLTAVLFAKS-GFATCAIDHQGHGFSDGLVA------HIPDLNPVVEDAISFFDSFRARH 128 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~~~~~~ 128 (308)
.|++|++-|= +..... ...+...|+++ |-.++++++|-+|.|.+... ...+.++..+|+..++++++.+.
T Consensus 29 gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5666666553 333211 12244445544 78899999999999986322 12367888999999999998654
Q ss_pred C--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 129 A--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 129 ~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ...|++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 567999999999999999999999999999999887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-06 Score=68.94 Aligned_cols=108 Identities=16% Similarity=0.057 Sum_probs=71.6
Q ss_pred CCcceEEEEccCCCccch------HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 56 KTLGVLCVVHGFTGESSW------IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
++.|+||++||.|..-.. +...+...|. ...+++.|+.-... ... ...+.....++.+..+++-...
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~--~~~--~~~yPtQL~qlv~~Y~~Lv~~~- 192 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS--DEH--GHKYPTQLRQLVATYDYLVESE- 192 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc--ccC--CCcCchHHHHHHHHHHHHHhcc-
Confidence 347999999998754321 1223334443 36888888864320 011 1245566677777777777332
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCcCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAMCGIS 170 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~ 170 (308)
+..+++++|-|.||.+++.+++... ...+++|+++|+....
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6679999999999999987765321 2358999999998765
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-06 Score=60.09 Aligned_cols=90 Identities=12% Similarity=0.208 Sum_probs=58.2
Q ss_pred EEEEccCCCccchHHHH-HHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSWIVQL-TAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
||++|||.++....-.. +.+.+... .|-.+.+.+.... +....++.+..++...+.+ ...|+|-
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l~h--~p~~a~~ele~~i~~~~~~-----~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHLPH--DPQQALKELEKAVQELGDE-----SPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCCCC--CHHHHHHHHHHHHHHcCCC-----CceEEee
Confidence 89999999876633222 22333322 2222333332222 6777778888888777654 6899999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
|+||+.|.+++.++. +++ |+++|...
T Consensus 67 sLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 67 SLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred cchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 999999999999875 444 44566443
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.9e-08 Score=74.89 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=69.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+...-||+.|=|+-.. .-+.+.+.|.++|+.|+.+|-.-+=.|.+ +.++.++|+..++++...+. +..++.+
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~y~~~w-~~~~~~l 330 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRFYARRW-GAKRVLL 330 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHHHHHhh-CcceEEE
Confidence 4556788888776655 33688999999999999999654444432 66778999999999887765 6779999
Q ss_pred EEechhhHHHHHHHHhcC
Q 035721 137 YSESLGGAIALYITLRQK 154 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p 154 (308)
+|+|+|+-+.-..-.+.|
T Consensus 331 iGySfGADvlP~~~n~L~ 348 (456)
T COG3946 331 IGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EeecccchhhHHHHHhCC
Confidence 999999987765555554
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.64 E-value=5e-07 Score=73.76 Aligned_cols=116 Identities=16% Similarity=0.193 Sum_probs=76.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEc-cCCCccchHHHHHHHHHHHcCCeE-----EE-ecCCCCcCCCCccccC
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVH-GFTGESSWIVQLTAVLFAKSGFAT-----CA-IDHQGHGFSDGLVAHI 107 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~h-G~~~~~~~~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~ 107 (308)
.+...+|+.+..--++...+ |-.+- .+. ...++|..+++.|.+.||.. .+ +|+|--- .
T Consensus 33 ~~~~~~gv~i~~~~~g~~~~------i~~ld~~~~-~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~------~-- 97 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGGTSG------IEYLDPSFI-TGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSP------A-- 97 (389)
T ss_pred ceecCCCceeecCCCCceee------eeecccccc-cccchHHHHHHHHHhcCcccCCEEEEEeechhhch------h--
Confidence 45556677766654542222 22221 111 11226789999999888852 23 6777210 0
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC------CccEEEEeCCcCC
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG------AWDGLILNGAMCG 168 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~ 168 (308)
..+++...+...|+..... .+.+++|+||||||.++..+....+. .|+++|.++++..
T Consensus 98 -~~~~~~~~lk~~ie~~~~~--~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 -ERDEYFTKLKQLIEEAYKK--NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred -hHHHHHHHHHHHHHHHHHh--cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 2446677888888877665 56799999999999999999887743 5999999988654
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.61 E-value=3e-07 Score=68.80 Aligned_cols=92 Identities=16% Similarity=0.101 Sum_probs=48.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLP 133 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~ 133 (308)
+...|||+||+.++.. .|..+.+.+... .+.-..+...++...... ...+++..++.+..-+........ ...+
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhcccccccccc
Confidence 4678999999999976 556666666551 122112222222111111 112444444444333322222111 2248
Q ss_pred EEEEEechhhHHHHHHHH
Q 035721 134 AFLYSESLGGAIALYITL 151 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~ 151 (308)
+.+||||+||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999998865554
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.5e-05 Score=63.71 Aligned_cols=136 Identities=15% Similarity=0.203 Sum_probs=84.5
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH---H-------------HHHH------cCC
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA---V-------------LFAK------SGF 87 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~-------------~l~~------~g~ 87 (308)
...++... .+..++|..+.........|+|+++.|.+|.+. .+..+. + .|.. +-.
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 33444433 356788877766555456899999999988776 221111 1 1111 125
Q ss_pred eEEEec-CCCCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------
Q 035721 88 ATCAID-HQGHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------ 153 (308)
Q Consensus 88 ~v~~~d-~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------ 153 (308)
.++-+| ..|.|.|..... ...+.++.++|+..+++..-.... ...+++|.|.|+||..+-.+|.. .
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 789999 558888864322 112333456778887776654432 45689999999999866555542 1
Q ss_pred CCCccEEEEeCCcCC
Q 035721 154 KGAWDGLILNGAMCG 168 (308)
Q Consensus 154 p~~v~~~vl~~~~~~ 168 (308)
+-.++|+++.++...
T Consensus 199 ~inl~Gi~igng~td 213 (437)
T PLN02209 199 PINLQGYVLGNPITH 213 (437)
T ss_pred ceeeeeEEecCcccC
Confidence 124789998888654
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=6e-06 Score=65.43 Aligned_cols=240 Identities=22% Similarity=0.189 Sum_probs=119.2
Q ss_pred cEEEEEEecCCCCC--CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC---------CCc
Q 035721 42 LRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI---------PDL 110 (308)
Q Consensus 42 ~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---------~~~ 110 (308)
..+....+.|.... .+.|.+++.||+++...... .....++..++.+...+....|.+....... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSL-GYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcc-hHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 45566666666543 35788999999998876432 3677787888887877753333222211000 000
Q ss_pred ch---HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCCcCCCCCchh-hhhHH
Q 035721 111 NP---VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQKFKPPWPL-EHLLF 184 (308)
Q Consensus 111 ~~---~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~ 184 (308)
.. ....+...-...... ...+....|+++|+..+..++...+. ....++..+...+........... .....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~ 187 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGA--SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARE 187 (299)
T ss_pred hheeeeccccccHHHHHHhh--hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHh
Confidence 00 000000000011111 23488999999999999988887763 233444433332211111100000 00011
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC-cceEEEeeCCCcc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE-VPMLICHGGDDVV 263 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~ 263 (308)
....+......... ..... ........ ...+ ...+....+..+. +|+++++|.+|..
T Consensus 188 ~~~~~~~~~~~~~~--------~~~~~-----------~~~~~~~~-~~~~--~~~d~~~~~~~i~~~P~l~~~G~~D~~ 245 (299)
T COG1073 188 LIDYLITPGGFAPL--------PAPEA-----------PLDTLPLR-AVLL--LLLDPFDDAEKISPRPVLLVHGERDEV 245 (299)
T ss_pred hhhhhccCCCCCCC--------Ccccc-----------cccccccc-hhhh--ccCcchhhHhhcCCcceEEEecCCCcc
Confidence 11111110000000 00000 00000000 0000 0012223344454 7999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCch---hhHHHhhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPE---ENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~---~~~~~i~~ 306 (308)
+|...+..+++.......+..++++++|... .... +..+.+.+
T Consensus 246 vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 292 (299)
T COG1073 246 VPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAE 292 (299)
T ss_pred cchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHH
Confidence 9999999999888643568888899999988 4444 34444443
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.9e-07 Score=73.55 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=70.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCe---EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFA---TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.-+++++||++.+.. .+..+...+...|+. ++.+++++.. .. .+.....+.+...++...... ...++
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~~~~~~~~ql~~~V~~~l~~~-ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGGD-GT------YSLAVRGEQLFAYVDEVLAKT-GAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhcccccccccccC-CC------ccccccHHHHHHHHHHHHhhc-CCCce
Confidence 447999999966665 446677777777777 8888888651 11 123333444444444433322 34599
Q ss_pred EEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCC
Q 035721 135 FLYSESLGGAIALYITLRQK--GAWDGLILNGAMCG 168 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 168 (308)
.++|||+||.++..++...+ .+|+.++.++++-.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999999999998888 78999999988643
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.9e-06 Score=74.33 Aligned_cols=124 Identities=20% Similarity=0.110 Sum_probs=74.3
Q ss_pred EEEEEEecCCCCCC--CcceEEEEccCCCccch---HHHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchH
Q 035721 43 RLFTQWWTPLPPAK--TLGVLCVVHGFTGESSW---IVQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 43 ~l~~~~~~~~~~~~--~~~~vv~~hG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 113 (308)
-|+..+|.|..... +.|++|+|||.+..... ....-...+..++..||.+++| |+-.+...... .-.--
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 46677787876533 37999999997543221 1123344566778999999998 22222111100 12334
Q ss_pred HHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
..|...+|++++.. .+ ++.+|.|+|+|.||..+...+..- ...++++|+.++...
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 56888888888764 23 788999999999999877665542 357999999988543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.9e-06 Score=61.28 Aligned_cols=108 Identities=12% Similarity=-0.018 Sum_probs=77.5
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcC-----CeEEEecCCCC----cCCCCc----------cccCCCcchHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSG-----FATCAIDHQGH----GFSDGL----------VAHIPDLNPVVEDAIS 119 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~~----------~~~~~~~~~~~~d~~~ 119 (308)
-+.||+||++|+.. ....++..|.+.+ --++.+|--|. |.=+.. .....+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 36799999999987 4477888887763 12566666652 111110 0111355667888999
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCC
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCG 168 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 168 (308)
++..|..++ +-.++-++||||||.-...|+..+.. .+..+|.+++.+.
T Consensus 125 ~msyL~~~Y-~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHY-NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhc-CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 999999887 77799999999999999999887532 4889998887655
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.3e-06 Score=69.38 Aligned_cols=125 Identities=22% Similarity=0.204 Sum_probs=80.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcC-CeEEEecCCC--CcCCCCccc---cCCCcchH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSG-FATCAIDHQG--HGFSDGLVA---HIPDLNPV 113 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g-~~v~~~d~~G--~G~s~~~~~---~~~~~~~~ 113 (308)
-|+..+|.|.....+.|++|+|||.+.... .. ..-...|+++| +.|+++++|= +|.-+.... ......--
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 466777888844466899999999754322 11 12345788887 9999999982 232211100 00111223
Q ss_pred HHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
..|...+|++++.. .+ ++++|.|+|+|.||+.++.+.+. ....++++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 56777777777654 23 88999999999999988776653 1245777888887664
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.5e-07 Score=67.57 Aligned_cols=107 Identities=15% Similarity=0.022 Sum_probs=52.5
Q ss_pred cceEEEEccCCCccc--hHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 58 LGVLCVVHGFTGESS--WIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
..+||+.||+|.+.. ..+..+.+.+.+. |.-|.+++.-....++........+.+.++.+.+.++.... -..-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~---L~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE---LANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG---GTT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh---hhcc
Confidence 456999999997542 1234444444332 77788888632111111111112334444444444443222 1236
Q ss_pred EEEEEechhhHHHHHHHHhcCC-CccEEEEeCCcC
Q 035721 134 AFLYSESLGGAIALYITLRQKG-AWDGLILNGAMC 167 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 167 (308)
++++|+|.||.+.-.++.+.++ .|+.+|.+++.-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999887653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.3e-05 Score=58.80 Aligned_cols=103 Identities=14% Similarity=0.000 Sum_probs=67.0
Q ss_pred cceEEEEccCCCccch-HHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESSW-IVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
..++|+.||.|.+... -...+.+.+.+. |..+.++.. |.+ ........+.+.++.+.+.+...... ..-+.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l---~~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL---SQGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh---hCcEE
Confidence 3469999999876542 234566666442 677777654 332 22222234455555555555443222 23599
Q ss_pred EEEechhhHHHHHHHHhcCC--CccEEEEeCCcC
Q 035721 136 LYSESLGGAIALYITLRQKG--AWDGLILNGAMC 167 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 167 (308)
++|+|.||.++-.++.+.++ .|+.+|.+++.-
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999986 599999887653
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.4e-05 Score=66.65 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=88.0
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH-------------------HHHHcCCeEE
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV-------------------LFAKSGFATC 90 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~v~ 90 (308)
...++... .+..++|..+...+....+|+||++.|.+|.++ .+..+.+ .+.+ -.+++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeeccccccccccccccc-ccceE
Confidence 34455444 677999988877665567899999999998877 3322211 1112 26799
Q ss_pred EecCC-CCcCCCCccc--cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------CC
Q 035721 91 AIDHQ-GHGFSDGLVA--HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------KG 155 (308)
Q Consensus 91 ~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------p~ 155 (308)
.+|.| |.|.|..... ...+.++.++|+..+|+..-.... ...+++|.|.|+||..+-.+|.. . +-
T Consensus 90 ~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~i 169 (415)
T PF00450_consen 90 FIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKI 169 (415)
T ss_dssp EE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTS
T ss_pred EEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccc
Confidence 99955 8998876433 234678888999999987766544 55699999999999976655542 2 23
Q ss_pred CccEEEEeCCcCC
Q 035721 156 AWDGLILNGAMCG 168 (308)
Q Consensus 156 ~v~~~vl~~~~~~ 168 (308)
.++|+++.++...
T Consensus 170 nLkGi~IGng~~d 182 (415)
T PF00450_consen 170 NLKGIAIGNGWID 182 (415)
T ss_dssp EEEEEEEESE-SB
T ss_pred ccccceecCcccc
Confidence 4789999988765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.6e-05 Score=57.16 Aligned_cols=79 Identities=11% Similarity=0.039 Sum_probs=48.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+..|||..|+|.+.. .+..+. ...++. ++++|+|..- ++. | +. ....+.|
T Consensus 11 ~~LilfF~GWg~d~~-~f~hL~---~~~~~D~l~~yDYr~l~-----------~d~---~-------~~----~y~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-PFSHLI---LPENYDVLICYDYRDLD-----------FDF---D-------LS----GYREIYL 61 (213)
T ss_pred CeEEEEEecCCCChH-Hhhhcc---CCCCccEEEEecCcccc-----------ccc---c-------cc----cCceEEE
Confidence 568999999998766 223321 123455 4567877211 110 1 11 2349999
Q ss_pred EEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 137 YSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
||+|||-.+|..+....| ++..|.+++..
T Consensus 62 vAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 999999999988876544 56666665543
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.2e-05 Score=63.61 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=79.2
Q ss_pred ceEEEEccCCCccchHHH------HHHHHHHHcCCeEEEecCCCCcCCCCcccc---------CCCcchHHHHHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWIVQ------LTAVLFAKSGFATCAIDHQGHGFSDGLVAH---------IPDLNPVVEDAISFFDS 123 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~~~~~~~d~~~~l~~ 123 (308)
.+|+|.-|.-++-+++.. .+++.| +.-++..++|-+|+|-+-... ..+.++..+|...++.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 579999998777653321 344443 567999999999998752111 12566777899999999
Q ss_pred HHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 124 FRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 124 ~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
++.+.. ...+|+++|-|+||++|..+-.++|..|.|....+++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 987654 5679999999999999999999999988887765554
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.8e-05 Score=53.51 Aligned_cols=112 Identities=14% Similarity=0.120 Sum_probs=67.4
Q ss_pred CCcceEEEEccCCCccchHH-H--------------HHHHHHHHcCCeEEEecCCC---CcCCCC-ccccCCCcchHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIV-Q--------------LTAVLFAKSGFATCAIDHQG---HGFSDG-LVAHIPDLNPVVED 116 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~--------------~~~~~l~~~g~~v~~~d~~G---~G~s~~-~~~~~~~~~~~~~d 116 (308)
.++..+|+|||.|.-....| + ++++.-.+.||.|++.+.-- +-.+.. +... ...-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky---irt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY---IRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh---ccchHHH
Confidence 45678999999875432122 1 23455556799999987431 111111 1111 1122333
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCCc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGISQ 171 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~ 171 (308)
..-+...+-... ....+.++.||+||...+.+..++| ++|.++.+-+++.....
T Consensus 176 ~~yvw~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~ 231 (297)
T KOG3967|consen 176 AKYVWKNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQ 231 (297)
T ss_pred HHHHHHHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCch
Confidence 333333332221 4558999999999999999999988 56888888777655443
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=98.15 E-value=4e-05 Score=56.96 Aligned_cols=99 Identities=19% Similarity=0.163 Sum_probs=63.8
Q ss_pred CcceEEEEccCC--CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH----HHHHHHHHHHHhcC-
Q 035721 57 TLGVLCVVHGFT--GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE----DAISFFDSFRARHA- 129 (308)
Q Consensus 57 ~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~----d~~~~l~~~~~~~~- 129 (308)
++.+|=|+-|.. ......++.+.+.|+++||.|++.-+.- | .+-...++ .....++.+....+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---------FDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 466777777753 3334567899999999999999987641 0 12222222 33334444443321
Q ss_pred --CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 130 --PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 130 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
..-++.-+|||+|+.+-+.+...++..-++-|+++-
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 224788899999999998888777655566676664
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.9e-05 Score=58.48 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=65.3
Q ss_pred cceEEEEccCCC--ccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTG--ESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
..+||+.||++. +.. -+..+.+.+.+. |+.+.++. .|-+. .......+.+.++.+.+.+...... ..-+
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L---~~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL---SEGY 97 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh---cCce
Confidence 356999999983 333 446777777533 67666665 23221 1122123444555555555442222 2369
Q ss_pred EEEEechhhHHHHHHHHhcCC--CccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLRQKG--AWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 167 (308)
.++|+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999999876 599999887653
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.2e-05 Score=64.47 Aligned_cols=107 Identities=15% Similarity=0.056 Sum_probs=61.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHH----------------cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAK----------------SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
+.-+|+|++|..|+.... +.++..... ..|+.+++|+-+- -..-+..++.+.++-+.++
T Consensus 88 sGIPVLFIPGNAGSyKQv-RSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQV-RSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHH-HHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHH
Confidence 456899999999886633 455443331 1356667766430 0000112455555555555
Q ss_pred HHHHHHhcC--------CCCCEEEEEechhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 121 FDSFRARHA--------PDLPAFLYSESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 121 l~~~~~~~~--------~~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
|..+...+. .+..|+++||||||.+|...+..- ++.|.-++..+++..
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 555433221 255699999999999987666532 344666666665433
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00023 Score=53.19 Aligned_cols=101 Identities=17% Similarity=0.082 Sum_probs=63.7
Q ss_pred ceEEEEccCCCccch-HHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 59 GVLCVVHGFTGESSW-IVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.++|++||++..... ....+.+.+.+. |..|++.|. |-| -.........+.++.+.+.+..... -.+-+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g---~~~s~l~pl~~Qv~~~ce~v~~m~~---lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG---IKDSSLMPLWEQVDVACEKVKQMPE---LSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC---cchhhhccHHHHHHHHHHHHhcchh---ccCceEE
Confidence 468999999987652 245677777665 889999986 333 0011111233333333333332222 3447899
Q ss_pred EEechhhHHHHHHHHhcCC-CccEEEEeCCc
Q 035721 137 YSESLGGAIALYITLRQKG-AWDGLILNGAM 166 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 166 (308)
+|.|.||.++-.++..-++ .|+..|-++++
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999888887553 58888877654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.4e-05 Score=61.47 Aligned_cols=113 Identities=17% Similarity=0.178 Sum_probs=69.9
Q ss_pred CCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCC--------------CCcCCCCc---c---cc-CCCcch
Q 035721 56 KTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQ--------------GHGFSDGL---V---AH-IPDLNP 112 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~~---~---~~-~~~~~~ 112 (308)
.+-|+++++||..++.. .....+-+.....|+.++++|-. |-+.|-.. . .. .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 45789999999988743 12234555555668888887432 22222110 0 00 123333
Q ss_pred H-HHHHHHHHHHHHHhcCCC--CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 113 V-VEDAISFFDSFRARHAPD--LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 113 ~-~~d~~~~l~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+ .+++-+.++..... .. .+..++||||||.-|+.+|.++|++++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f~~--~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPA--DGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCc--ccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 2 23444333322221 22 278999999999999999999999999999988876654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00036 Score=52.61 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=35.6
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+.++..++|||+||.+++.....+|+.+...++++|...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 666899999999999999999999999999999999644
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.8e-05 Score=45.67 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=30.5
Q ss_pred cccccccccceeEEcCCCcEEEEEEecCCC----CCCCcceEEEEccCCCccch
Q 035721 24 YARHSVSHSSEYITNSRGLRLFTQWWTPLP----PAKTLGVLCVVHGFTGESSW 73 (308)
Q Consensus 24 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~~~vv~~hG~~~~~~~ 73 (308)
....+++.++..+++.||.-|......+.. ...++|+|++.||+.+++..
T Consensus 5 i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 5 IEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp HHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred HHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 345688899999999999999887766544 34568999999999988873
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.5e-05 Score=50.80 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=44.0
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
..|+|++.++.|+++|.+.++.+.+.+ ++++++.+++.||..+ ..-.-+.+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~~~s~C~~~~ 86 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYAGGSPCVDKA 86 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceecCCChHHHHH
Confidence 589999999999999999999999999 5689999999999988 433333333
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00015 Score=59.11 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=82.4
Q ss_pred cceEEEEccCCCccchH----HHHHHHHHHHcCCeEEEecCCCCcCCCCcccc------CCCcchHHHHHHHHHHHHHHh
Q 035721 58 LGVLCVVHGFTGESSWI----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH------IPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~~~~~ 127 (308)
.|..|+|-|=+.....+ -..+...-.+.|-.|+..++|=+|.|.+.... ..+..+...|+..+|+.+..+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 67777777754433211 01233333445889999999999988653321 135677789999999999988
Q ss_pred cC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 128 HA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 128 ~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.. ++.|.+.+|-|+-|.++..+-.++|+.+.|.|..+++..
T Consensus 166 ~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred cCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 76 456999999999999999999999999999998777543
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0006 Score=54.69 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=81.4
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccccc
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKE 209 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (308)
.-++++|.|.|==|..++..|.. .+||++++-+.-... .....+......+-..+......
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~L--------N~~~~l~h~y~~yG~~ws~a~~d---------- 230 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVL--------NMKANLEHQYRSYGGNWSFAFQD---------- 230 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccC--------CcHHHHHHHHHHhCCCCccchhh----------
Confidence 56699999999999999999984 468998884332110 01111111111111122211110
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCC
Q 035721 210 EWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGM 289 (308)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (308)
.+..........+.......+ .|......++++|.++|.|..|++..++...-+.+.+++ ...+..+|++
T Consensus 231 -----Y~~~gi~~~l~tp~f~~L~~i----vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~ 300 (367)
T PF10142_consen 231 -----YYNEGITQQLDTPEFDKLMQI----VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNA 300 (367)
T ss_pred -----hhHhCchhhcCCHHHHHHHHh----cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCC
Confidence 000111111111222222222 122233356689999999999999999999999999986 5799999999
Q ss_pred cccccC
Q 035721 290 WHQLIG 295 (308)
Q Consensus 290 gH~~~~ 295 (308)
+|....
T Consensus 301 ~H~~~~ 306 (367)
T PF10142_consen 301 GHSLIG 306 (367)
T ss_pred Ccccch
Confidence 998874
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00071 Score=56.12 Aligned_cols=137 Identities=17% Similarity=0.163 Sum_probs=83.5
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchH--HHHHHH-------------HHHH------cCCe
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI--VQLTAV-------------LFAK------SGFA 88 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~--~~~~~~-------------~l~~------~g~~ 88 (308)
...++... .+..++|..+.........|+|+++.|.+|.+... +....+ .|.. +-..
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 34455443 35678887776655545689999999998876521 111111 1111 1257
Q ss_pred EEEec-CCCCcCCCCccccCCC-cchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------C
Q 035721 89 TCAID-HQGHGFSDGLVAHIPD-LNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------K 154 (308)
Q Consensus 89 v~~~d-~~G~G~s~~~~~~~~~-~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------p 154 (308)
++-+| .-|.|.|......... -.+.++++..+++..-.... ...+++|.|.|+||..+-.+|.. . +
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 89999 5589998653322112 12334677777665543322 45689999999999866655543 1 1
Q ss_pred CCccEEEEeCCcCC
Q 035721 155 GAWDGLILNGAMCG 168 (308)
Q Consensus 155 ~~v~~~vl~~~~~~ 168 (308)
-.++|+++-++...
T Consensus 198 inLkGi~iGNg~t~ 211 (433)
T PLN03016 198 INLQGYMLGNPVTY 211 (433)
T ss_pred ccceeeEecCCCcC
Confidence 25789998887654
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00068 Score=51.95 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=61.5
Q ss_pred CCcceEEEEccCCCccc-hHHHHHHHHHHHcC----CeEEEecCCCCcCCCCccccCCCcchHHHHHH-HHHHHHHHhcC
Q 035721 56 KTLGVLCVVHGFTGESS-WIVQLTAVLFAKSG----FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI-SFFDSFRARHA 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~-~~l~~~~~~~~ 129 (308)
.+.|++++.||-..... ..+ .+.+.|...| -.++.+|.-- ........+..+++.+.+. +++=++...+.
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 35789999998532211 122 3344444433 3466666432 0001111112222222221 22223333322
Q ss_pred ---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 130 ---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 130 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
....-+|.|.|+||.+++..+..+|+++..++..+|...
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 455678999999999999999999999999999888644
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.76 E-value=9e-05 Score=52.38 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMC 167 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 167 (308)
.....+...++...... +..+++++|||+||.+|..++..... +...++.++++.
T Consensus 9 ~~~~~i~~~~~~~~~~~-p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQY-PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHC-CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455666666555432 55699999999999999998887654 466677777653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0026 Score=45.58 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=66.9
Q ss_pred CCcceEEEEccCCCccchHHH-------HHHH----HHHH--cCCeEEEecCCCCcCCCC-ccc--cCCCcchHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQ-------LTAV----LFAK--SGFATCAIDHQGHGFSDG-LVA--HIPDLNPVVEDAIS 119 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~-------~~~~----~l~~--~g~~v~~~d~~G~G~s~~-~~~--~~~~~~~~~~d~~~ 119 (308)
....+.++++|.+.+...... .+.+ .+.. .+-.|-++-+.|+-.-.. ... ....-+.-+.++..
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHH
Confidence 346789999998876542211 1111 1111 123454544444432211 000 00123445667888
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
+++.|.....+..++.++|||+|+.++-..+...+..+..+|+++++
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 88877665335668999999999999988888767789999998875
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00016 Score=60.75 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.|..+++.|.+.||. -.++.|...--... ......+++...+...|+.+.... ++.+++|+||||||.+++.+...
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n-ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN-GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc-CCCeEEEEEeCCchHHHHHHHHh
Confidence 568999999999997 34444322111110 001123556677888888776542 46799999999999999988763
Q ss_pred cC---------------CCccEEEEeCCcC
Q 035721 153 QK---------------GAWDGLILNGAMC 167 (308)
Q Consensus 153 ~p---------------~~v~~~vl~~~~~ 167 (308)
-. ..|++.|.++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheeccccc
Confidence 21 2378888888754
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0028 Score=48.23 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=76.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+.|.|+++-...|+.....+...+.|... ..|+..|+-.--.-+-..+. ++++++++.+.+.++.++. .++
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~Gp------~~h 172 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLGP------DAH 172 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhCC------CCc
Confidence 456789998888888765667778888775 78999998754333333333 5889999999999988875 567
Q ss_pred EEEechhhH-----HHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 136 LYSESLGGA-----IALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 136 l~G~S~Gg~-----~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+++.|.-+. +++..+...|....+.++++++....
T Consensus 173 v~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 173 VMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 777776544 44444455677788999998876543
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00037 Score=56.58 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHcCCe------EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHH
Q 035721 73 WIVQLTAVLFAKSGFA------TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIA 146 (308)
Q Consensus 73 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a 146 (308)
++|..+++.|..-||. -..+|+|= |.... ...+++...+...++...... +..|++|++||||+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~---e~rd~yl~kLK~~iE~~~~~~-G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS---EERDQYLSKLKKKIETMYKLN-GGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh---hHHHHHHHHHHHHHHHHHHHc-CCCceEEEecCCccHHH
Confidence 4788899999988887 34567762 11111 134556677777777776663 45899999999999999
Q ss_pred HHHHHhcCC--------CccEEEEeCC
Q 035721 147 LYITLRQKG--------AWDGLILNGA 165 (308)
Q Consensus 147 ~~~a~~~p~--------~v~~~vl~~~ 165 (308)
+.+....++ .+++.+.+++
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCc
Confidence 999988876 2555555554
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0011 Score=50.45 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=35.6
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCc
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAM 166 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~ 166 (308)
+.....++...++.+..+. +..++++.|||+||.+|..++.... ..+..+..-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~-p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQY-PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhC-CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 3344455555555554433 5568999999999999998877532 335544444443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0042 Score=51.44 Aligned_cols=138 Identities=17% Similarity=0.178 Sum_probs=88.8
Q ss_pred ccccceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHH----H-c-------------CCe
Q 035721 29 VSHSSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFA----K-S-------------GFA 88 (308)
Q Consensus 29 ~~~~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~----~-~-------------g~~ 88 (308)
+.....++... .|..++|..+........+|.||.+.|.+|.+... .+...+- . . -..
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~--G~~~E~GPf~v~~~G~tL~~N~ySWnk~aN 119 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG--GLFEENGPFRVKYNGKTLYLNPYSWNKEAN 119 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh--hhhhhcCCeEEcCCCCcceeCCcccccccc
Confidence 34445566544 58899998887766546689999999999887622 2211110 0 1 135
Q ss_pred EEEecCC-CCcCCCCcccc--CCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----cC-----
Q 035721 89 TCAIDHQ-GHGFSDGLVAH--IPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----QK----- 154 (308)
Q Consensus 89 v~~~d~~-G~G~s~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~p----- 154 (308)
++-+|.| |.|.|-..... ..+-+..++|...+|...-.+.. ..+++.|.|-|++|...-.+|.. ..
T Consensus 120 iLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred EEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 7888877 77777543321 12445567787777765544433 67799999999999766555542 21
Q ss_pred -CCccEEEEeCCcCC
Q 035721 155 -GAWDGLILNGAMCG 168 (308)
Q Consensus 155 -~~v~~~vl~~~~~~ 168 (308)
-.++|+++-+|...
T Consensus 200 ~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 200 NINLKGYAIGNGLTD 214 (454)
T ss_pred cccceEEEecCcccC
Confidence 24788888777655
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00045 Score=49.98 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=48.3
Q ss_pred CeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh------cCCCccEE
Q 035721 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR------QKGAWDGL 160 (308)
Q Consensus 87 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~v~~~ 160 (308)
..+..+++|-..... .+..+...-+.++...++....+. +..+++|+|+|.|+.++..++.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 445666676432211 111244455667777777666553 56799999999999999998877 22578999
Q ss_pred EEeCCcCC
Q 035721 161 ILNGAMCG 168 (308)
Q Consensus 161 vl~~~~~~ 168 (308)
++++-+..
T Consensus 116 vlfGdP~~ 123 (179)
T PF01083_consen 116 VLFGDPRR 123 (179)
T ss_dssp EEES-TTT
T ss_pred EEecCCcc
Confidence 99886543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0016 Score=53.68 Aligned_cols=121 Identities=22% Similarity=0.179 Sum_probs=77.1
Q ss_pred EEEecCCCCCCCcceEEEEccCCCccchHHHHHHHH-------------------HHHcCCeEEEec-CCCCcCCCC-cc
Q 035721 46 TQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVL-------------------FAKSGFATCAID-HQGHGFSDG-LV 104 (308)
Q Consensus 46 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~-~~ 104 (308)
++.+.+.++..++|.++++.|.+|.+. .+-.+.+. +.+ .-.++.+| .-|.|.|.. ..
T Consensus 89 fy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 89 FYTFESPNDPANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEecCCCCCCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCccccccc
Confidence 333444344356899999999998877 32333110 111 13689999 558898875 22
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCcCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLRQKG---AWDGLILNGAMCG 168 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 168 (308)
....++....+|+..+++.+..... ...+.+|+|-|+||.-+..+|..-.+ ..++++++++...
T Consensus 167 e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 167 EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 3334666677788777776654321 34589999999999988777765443 3567776665443
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00082 Score=46.67 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+.+.+.+.++.+..+. +..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKY-PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHh
Confidence 3445555555555443 44689999999999999888775
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.016 Score=46.27 Aligned_cols=234 Identities=12% Similarity=0.030 Sum_probs=112.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
..+||++=|+.+..+.+.........+.||.++.+-.|-+-..-.......+......-+.+++..... +..++++-
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~---~~~pi~fh 114 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNS---DPCPIIFH 114 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccC---CcCceEEE
Confidence 434555555555555455677777888899999988876543332222212333333444444443331 55688888
Q ss_pred EechhhHHHHHHH---Hh-c-C---CCccEEEEeCCcCCCCcCCCCCch--hhhhHHHhhhhCCC-cccccCCCCCCCcc
Q 035721 138 SESLGGAIALYIT---LR-Q-K---GAWDGLILNGAMCGISQKFKPPWP--LEHLLFTVAWLVPT-WRVVPTRGSLPMVS 206 (308)
Q Consensus 138 G~S~Gg~~a~~~a---~~-~-p---~~v~~~vl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 206 (308)
-+|+||...+... .. . | +.+.+++..+.+............ ..........+... ....... +....
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~ 192 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLT--MAGNE 192 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEE--eeecc
Confidence 9999998654332 21 2 2 345666666554332211110000 00000000000000 0000000 00000
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC--CCcEE
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK--DKTLS 284 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~ 284 (308)
............... .. ...+. ..+...-.....+.+.+.+..|.++|.+..+++.+..... +++.+
T Consensus 193 ~~~~~~~~~~~~~~~------~r--~~~~~---~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~ 261 (350)
T KOG2521|consen 193 GGAYLLGPLAEKISM------SR--KYHFL---DRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSV 261 (350)
T ss_pred cchhhhhhhhhcccc------cc--chHHH---HHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEe
Confidence 000000000000000 00 00000 1112222233567888999999999999988886655433 45555
Q ss_pred EecCCccccc--CCchhhHHHhhhc
Q 035721 285 IYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 285 ~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
-+.++-|..+ ..|..+.++..++
T Consensus 262 ~~~ds~H~~h~r~~p~~y~~~~~~F 286 (350)
T KOG2521|consen 262 KFKDSEHVAHFRSFPKTYLKKCSEF 286 (350)
T ss_pred eccCccceeeeccCcHHHHHHHHHH
Confidence 5678899888 7888877776654
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=49.35 Aligned_cols=49 Identities=12% Similarity=0.186 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCc
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAM 166 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~ 166 (308)
...+.++.+... .+.++.+.|||.||.+|..++... .++|.++...+++
T Consensus 70 ~A~~yl~~~~~~--~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKK--YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHh--CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 334455555444 344799999999999999988874 3578888887775
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0035 Score=54.41 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=67.5
Q ss_pred EEEEEEecCCCCCCC-cceEEEEccCCCccch---H-HHHHHHHHHHcCCeEEEecCC----CCcCCCC--ccccCCCcc
Q 035721 43 RLFTQWWTPLPPAKT-LGVLCVVHGFTGESSW---I-VQLTAVLFAKSGFATCAIDHQ----GHGFSDG--LVAHIPDLN 111 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~-~~~vv~~hG~~~~~~~---~-~~~~~~~l~~~g~~v~~~d~~----G~G~s~~--~~~~~~~~~ 111 (308)
-|+..++.|...... .|++|++||.+..... + .......+..+...|+.+.+| |+..... .++. ..
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN-~g-- 172 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGN-LG-- 172 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCc-cc--
Confidence 355556767665222 7999999998643321 1 112222333335677888877 2222211 1111 12
Q ss_pred hHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCc
Q 035721 112 PVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAM 166 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~ 166 (308)
..|...++++++.. .+ ++.+|.++|||.||..+..+...- ...+..+|..++.
T Consensus 173 --l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 --LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 23666666666543 22 888999999999999887665421 1345666665554
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0021 Score=47.03 Aligned_cols=75 Identities=17% Similarity=0.087 Sum_probs=46.7
Q ss_pred HHHHHHHcCCeEEEecCCCCcCCCCc----cccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 78 TAVLFAKSGFATCAIDHQGHGFSDGL----VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 78 ~~~~l~~~g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+..|... .+|+++-+|=....... .......+-...|+.++.++.....+++.+++|+|||.|+.+..++..++
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34445444 67888887732211111 00001222334677777776665544677999999999999999998875
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0072 Score=42.17 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=33.2
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
...++-|.||||..|..+.-++|+.+.++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3678889999999999999999999999999988654
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.024 Score=47.96 Aligned_cols=126 Identities=18% Similarity=0.187 Sum_probs=75.3
Q ss_pred cCCCc--EEEEEEecCCCCCCCcceEEEEccCCCccchHHHH----HHHHHHHcCCeEEEecCCCCcCCCCc--cccCCC
Q 035721 38 NSRGL--RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL----TAVLFAKSGFATCAIDHQGHGFSDGL--VAHIPD 109 (308)
Q Consensus 38 ~~~g~--~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~~~~ 109 (308)
..++. .|.+.+|.|..= ..-++.+-|.+......+.. +...+ .+||.++.-| -||..+... .....+
T Consensus 9 ~~~~~~~~i~fev~LP~~W---NgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD-~Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPDNW---NGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTD-SGHQGSAGSDDASFGNN 83 (474)
T ss_pred cCCCCcceEEEEEECChhh---ccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEec-CCCCCCcccccccccCC
Confidence 34444 888999988732 22355555544433322222 33444 5699999999 466555331 111111
Q ss_pred cchHH-------HHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 110 LNPVV-------EDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~-------~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+.+. .+...+-+.+-..+. .+..-...|.|.||.-++..|+++|+.+++|+.-+|...
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 11111 111111122222221 677889999999999999999999999999999999765
|
It also includes several bacterial homologues of unknown function. |
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.014 Score=40.33 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=48.1
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
..||+.-|++..++ ....+ ....++. ++++|++.... ++ |..+. + .+.++
T Consensus 12 ~LIvyFaGwgtpps-~v~HL---ilpeN~dl~lcYDY~dl~l---------df-----DfsAy------~-----hirlv 62 (214)
T COG2830 12 HLIVYFAGWGTPPS-AVNHL---ILPENHDLLLCYDYQDLNL---------DF-----DFSAY------R-----HIRLV 62 (214)
T ss_pred EEEEEEecCCCCHH-HHhhc---cCCCCCcEEEEeehhhcCc---------cc-----chhhh------h-----hhhhh
Confidence 47888899887765 22222 2334454 67788864321 11 11111 1 56789
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
++|||-.+|-++.+..+ +++.+.+++.
T Consensus 63 AwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 63 AWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 99999999999988765 6666666653
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.015 Score=48.83 Aligned_cols=112 Identities=17% Similarity=0.142 Sum_probs=63.1
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCcc------chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGES------SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.|+.|.++.+ +++-.|+-+||.|.-. +.|.+.++..| |..|+.+|+----+ .. +....+++.
T Consensus 384 ~~~~wh~P~p-~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPE-----aP---FPRaleEv~ 451 (880)
T KOG4388|consen 384 SLELWHRPAP-RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPE-----AP---FPRALEEVF 451 (880)
T ss_pred ccccCCCCCC-CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCC-----CC---CCcHHHHHH
Confidence 3555555433 4566788899987422 23455555554 79999999842222 11 222223332
Q ss_pred HHHHHHHHh----cCCCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEeCCcCC
Q 035721 119 SFFDSFRAR----HAPDLPAFLYSESLGGAIALYITLR----QKGAWDGLILNGAMCG 168 (308)
Q Consensus 119 ~~l~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 168 (308)
-+.-++... ..-+++|+++|-|.||.+.+..+.+ .-...+|+++.-++.-
T Consensus 452 fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 452 FAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred HHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 222222211 1167799999999999965544433 2223468888766543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0073 Score=49.15 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCC--CEEEEEechhhHHHHHHHHh
Q 035721 112 PVVEDAISFFDSFRARHAPDL--PAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 152 (308)
...+++...++.+...+ +.. ++++.|||+||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERY-KDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHH
Confidence 35566777777776654 333 49999999999999988854
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0038 Score=50.19 Aligned_cols=107 Identities=16% Similarity=0.053 Sum_probs=82.7
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+|+|+..-|++.............|. -+-+.+++|-++.|.+.+.. .-++.+.+.|...+++.++.- -+.+.
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i--Y~~kW 136 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI--YPGKW 136 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh--ccCCc
Confidence 478999999988754422234444442 45789999999999875542 136788899999999999876 35589
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+--|-|=||+.++.+-.-+|+-|++.|...++..
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999999999999999999997655443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.01 Score=48.88 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+.+.++.+..+. +..++++.|||+||.+|..++.
T Consensus 263 ~I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 3444444333332 5568999999999999998764
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.017 Score=47.71 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
+...++.+.... +..++++.|||+||.+|..++.
T Consensus 270 i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 334444443333 5568999999999999998874
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.036 Score=44.42 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=55.5
Q ss_pred CeEEEecCC-CCcCCCCccccCC-CcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc---------
Q 035721 87 FATCAIDHQ-GHGFSDGLVAHIP-DLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ--------- 153 (308)
Q Consensus 87 ~~v~~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~--------- 153 (308)
..++-+|.| |.|.|-....... +-++.++|+..+|+.+-.... ...+++|.|-|+||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899988 8898865432211 223445788877776654432 567999999999999766665531
Q ss_pred -CCCccEEEEeCCcCCC
Q 035721 154 -KGAWDGLILNGAMCGI 169 (308)
Q Consensus 154 -p~~v~~~vl~~~~~~~ 169 (308)
+-.++|+++-++....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1247888888876543
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.016 Score=47.10 Aligned_cols=21 Identities=33% Similarity=0.456 Sum_probs=18.4
Q ss_pred CCEEEEEechhhHHHHHHHHh
Q 035721 132 LPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.++.+.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999988754
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.027 Score=46.02 Aligned_cols=39 Identities=13% Similarity=0.224 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.+++.+.++.+...+. ...++++.|||+||.+|+..|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445455544444321 12378999999999999988764
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.015 Score=46.70 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=45.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-CccccCC-CcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-GLVAHIP-DLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~-~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
+++-.||+.||+-+....+|...+...... +.=..+..+|+-..- ....... --...++++.+.+..... .+
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si-----~k 151 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI-----EK 151 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcccc-----ce
Confidence 446789999999873223566666666554 222233333332211 1111100 111223333333333333 39
Q ss_pred EEEEEechhhHHHHHH
Q 035721 134 AFLYSESLGGAIALYI 149 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~ 149 (308)
+-++|||+||.++..+
T Consensus 152 ISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeecCCeeeeEE
Confidence 9999999999876543
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=95.70 E-value=1.1 Score=37.66 Aligned_cols=124 Identities=12% Similarity=0.046 Sum_probs=73.0
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH-HHHHHHHHHHcCCeE-EEecCCCCcCCCCccccCCCc
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI-VQLTAVLFAKSGFAT-CAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~ 110 (308)
..++.+..+.++.|. +.|.+ -+.|..|...|+-..-. + --.+.+.| |... +.-|.|=-|.+--.....+ -
T Consensus 267 G~r~~D~~reEi~yY-FnPGD--~KPPL~VYFSGyR~aEG-FEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E 338 (511)
T TIGR03712 267 GQRLVDSKRQEFIYY-FNPGD--FKPPLNVYFSGYRPAEG-FEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-E 338 (511)
T ss_pred CceEecCCCCeeEEe-cCCcC--CCCCeEEeeccCcccCc-chhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-H
Confidence 345556667777764 44554 34677899999865332 2 11234444 4544 4457776665533211100 1
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
+.+.+-|...++.|+- +...+++-|.|||..-|+.++++.. ..++|+--|...+
T Consensus 339 ~~I~~~I~~~L~~LgF---~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 339 QGIINVIQEKLDYLGF---DHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHHhCC---CHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 1233344444444443 5568999999999999999998764 4677776665543
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.026 Score=45.35 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhc
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+++.+.++.+...+. ...++++.|||+||.+|..+|...
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445555555544431 123699999999999999887653
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.041 Score=50.61 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=61.2
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
...|++.|+|..-+... -...++..| ..|.+|..........+++..+.-...-++.+. +..+..
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ----P~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ----PEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC----CCCCee
Confidence 34688999999877654 334444443 223334332222222366666665555555444 455999
Q ss_pred EEEechhhHHHHHHHHhcC--CCccEEEEeCCcCC
Q 035721 136 LYSESLGGAIALYITLRQK--GAWDGLILNGAMCG 168 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 168 (308)
++|+|+|+.++..+|.... +....+|++++...
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999998887543 34566888887543
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.024 Score=47.28 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+...++.+.... +..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 3455555554443 5669999999999999998874
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.018 Score=48.08 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=18.2
Q ss_pred CCEEEEEechhhHHHHHHHHh
Q 035721 132 LPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.++.+.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999988754
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.049 Score=35.83 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=23.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS 72 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~ 72 (308)
-..+.+..+|..|++....+.. +...+|||+||++++--
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~--~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKR--PNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S---TT-EEEEEE--SS--GG
T ss_pred CCCeeEEEeeEEEEEEEeeCCC--CCCeEEEEECCCCccHH
Confidence 3456667789999998776644 35678999999998754
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.14 Score=40.01 Aligned_cols=133 Identities=19% Similarity=0.260 Sum_probs=85.7
Q ss_pred eEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchH---HHHHH-----------HHHHHcCCeEEEecCC-CCc
Q 035721 35 YITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWI---VQLTA-----------VLFAKSGFATCAIDHQ-GHG 98 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~---~~~~~-----------~~l~~~g~~v~~~d~~-G~G 98 (308)
++...++....+.++..... ...+|..+.+.|.++.+..- ++.+. ..|.. ..++.+|-| |.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaG 84 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAG 84 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCc
Confidence 34444566666666654332 23478889999987665421 22221 12322 567888876 777
Q ss_pred CCCC--ccccCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcC---------CCccEEEEeCC
Q 035721 99 FSDG--LVAHIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQK---------GAWDGLILNGA 165 (308)
Q Consensus 99 ~s~~--~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p---------~~v~~~vl~~~ 165 (308)
.|-- ...+..+..+.+.|+.++++.+-.... ...|++|+..|+||-+|..++...- ..+.+++|-++
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 7643 333334677888999999987765433 5679999999999999988776422 24678888777
Q ss_pred cCCC
Q 035721 166 MCGI 169 (308)
Q Consensus 166 ~~~~ 169 (308)
+...
T Consensus 165 WISP 168 (414)
T KOG1283|consen 165 WISP 168 (414)
T ss_pred ccCh
Confidence 6553
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.039 Score=45.03 Aligned_cols=40 Identities=10% Similarity=0.123 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..+.+.+-++.+...+. ...+|.+.|||+||.+|+..|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455555555554431 12369999999999999988753
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.087 Score=41.93 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=42.2
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
..++.+|-.++.+..|.+.+++.+.-.++.+++ ...+.++|+..|...
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~ 372 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI 372 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh
Confidence 356789999999999999999999999999975 467889999999876
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.042 Score=46.81 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=19.8
Q ss_pred CCCCEEEEEechhhHHHHHHHHh
Q 035721 130 PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
++-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 55699999999999999887764
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.086 Score=42.28 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=30.5
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCG 168 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 168 (308)
+..|+.++|||+|+.+...++..-.+ .|..+++++.+..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 55589999999999998877665443 3788999987654
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.032 Score=46.75 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHH
Q 035721 113 VVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+++.+.++.+...+. ...+|.+.|||+||.+|+..|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34455555555544321 2358999999999999998875
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.057 Score=45.19 Aligned_cols=38 Identities=21% Similarity=0.292 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 115 EDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+++.+-++.+...+. ...+|++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444444544444331 12378999999999999987764
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.07 Score=44.82 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhc----C-CCCCEEEEEechhhHHHHHHHH
Q 035721 114 VEDAISFFDSFRARH----A-PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~----~-~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+++.+.++.+...+ . ...++.+.|||+||.+|...|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345555555554432 0 2347999999999999998875
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.12 Score=38.89 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=37.5
Q ss_pred CCeEEEecCCCC-cCCC--CccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 86 GFATCAIDHQGH-GFSD--GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 86 g~~v~~~d~~G~-G~s~--~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
|+.+..+++|.. +--. +......+..+-++.+.+.++.... .+++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~---~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA---AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc---CCCCEEEEEECHHHHHHHHHHHHH
Confidence 577788888862 1100 1111112334444444444443222 455899999999999998777654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.11 Score=39.85 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+..+..+++..++..+ +..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 258 yySa~ldI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 258 YYSAALDILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC-CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344445555555544 6679999999999999999988775 444544444
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.11 Score=39.85 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+..+..+++..++..+ +..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 258 yySa~ldI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC-CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344445555555544 6679999999999999999988775 444544444
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.086 Score=44.21 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..+++.+.++.+...+. ...++.+.|||+||.+|+..|..
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34555555555554431 12379999999999999988753
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.17 Score=40.66 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=45.3
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC----------------------CC-CcEEEecCCcccccCCchhhHHHhhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS----------------------KD-KTLSIYPGMWHQLIGEPEENVELVFG 306 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 306 (308)
.++||+..|+.|.+|+.-..+.+.+.+.- .+ .++..+.+|||+...+|+...+.+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 47999999999999998888888777640 12 67778889999988778877766554
Q ss_pred c
Q 035721 307 E 307 (308)
Q Consensus 307 ~ 307 (308)
+
T Consensus 313 f 313 (319)
T PLN02213 313 W 313 (319)
T ss_pred H
Confidence 4
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.15 Score=41.14 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.+.+.++.+.... +.-++.+-|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHH
Confidence 3444444444333 44599999999999999988764
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.76 Score=29.57 Aligned_cols=84 Identities=14% Similarity=0.113 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhH--HHHHHHH
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGA--IALYITL 151 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~--~a~~~a~ 151 (308)
.+..+.+.+..+|+..=.+.++..|.+....-.....+.=...+..+++.. +..+++++|-|--.= +-..++.
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-----P~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-----PERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-----CCCcEEEEeeCCCcCHHHHHHHHH
Confidence 456777778777888777777777554322111001111223344444433 455999999995443 3446788
Q ss_pred hcCCCccEEEE
Q 035721 152 RQKGAWDGLIL 162 (308)
Q Consensus 152 ~~p~~v~~~vl 162 (308)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 99999998864
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.16 Score=43.16 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh-----cCC------CccEEEEeCCc
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR-----QKG------AWDGLILNGAM 166 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~ 166 (308)
+.-...+++.+....- +..+++.+||||||.++=.+... .|+ ..+|+|.++.+
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3334445554444321 67899999999999887654432 232 35677766654
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.17 Score=36.61 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=35.6
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC---CCCcEEEecCCccccc
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS---KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~ 294 (308)
+++++-|-|+.|.++.+.+.....+.+.+ ....-++.+|+||+-.
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGl 181 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGL 181 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeec
Confidence 56788899999999998887776666543 3457778899999977
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=91.98 E-value=1.8 Score=33.99 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=53.4
Q ss_pred ceEEEEccCCCccchH-----HHHHHHHH-HHcCCeEEEecCCCCcCC--------CCcccc---CCCcchHHHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWI-----VQLTAVLF-AKSGFATCAIDHQGHGFS--------DGLVAH---IPDLNPVVEDAISFF 121 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~~~---~~~~~~~~~d~~~~l 121 (308)
..|||+=|.+.+.... ...+.+.+ ...+-..+++=.+|-|.. ...... ...-....+.+....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4567777766543311 12455555 222335555666788872 111110 001123345555566
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
..+.....+..++.++|+|-|+..|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 66544433667899999999999998888653
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.84 Score=37.30 Aligned_cols=53 Identities=15% Similarity=0.030 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHh-cCCCCCEEEEEechhhHHHHHHH----HhcCCCccEEEEeCCcC
Q 035721 115 EDAISFFDSFRAR-HAPDLPAFLYSESLGGAIALYIT----LRQKGAWDGLILNGAMC 167 (308)
Q Consensus 115 ~d~~~~l~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~ 167 (308)
..+.++++.+... ....++++|.|.|.||.-++..+ ...|..++-..+.++..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 4566777777665 22667999999999999887544 34554444444444433
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.15 Score=42.76 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=43.0
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC------------------------CCCcEEEecCCccccc-CCchhhHHHh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS------------------------KDKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
.++||+.+|..|.+++.-..+.+.+.+.- .+.+++.+.+|||++. ++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 38999999999999999998888877631 1456888999999999 9999877776
Q ss_pred hhc
Q 035721 305 FGE 307 (308)
Q Consensus 305 ~~~ 307 (308)
.++
T Consensus 410 ~~f 412 (415)
T PF00450_consen 410 RRF 412 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=91.06 E-value=0.52 Score=39.60 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=45.5
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC----------------------CC-CcEEEecCCcccccCCchhhHHHhhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS----------------------KD-KTLSIYPGMWHQLIGEPEENVELVFG 306 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 306 (308)
.++||+..|+.|.+|+.-..+.+.+.+.- .+ .+++.+.+|||+...+|++..+.+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 47999999999999998888888776630 12 57788889999998778877666554
Q ss_pred c
Q 035721 307 E 307 (308)
Q Consensus 307 ~ 307 (308)
+
T Consensus 427 F 427 (433)
T PLN03016 427 W 427 (433)
T ss_pred H
Confidence 4
|
|
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.94 E-value=6.4 Score=31.31 Aligned_cols=96 Identities=11% Similarity=-0.022 Sum_probs=59.6
Q ss_pred CcceEEEEccCCCccc----hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCc----------cccCC--CcchHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESS----WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGL----------VAHIP--DLNPVVEDAIS 119 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~----~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~----------~~~~~--~~~~~~~d~~~ 119 (308)
.+..|+|+-|....-. .-.-.+...|.. .+.+++++--+|.|.-.-. ..... --..+.+.|..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 4677888888532211 011245555655 5788888888888754211 00000 01223456777
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+-..+...+.++.+|.++|+|-|+.+|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 777776665588899999999999998777754
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.89 E-value=1 Score=37.85 Aligned_cols=58 Identities=19% Similarity=0.163 Sum_probs=43.4
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC-----------------------CCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS-----------------------KDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
..+++|..|+.|.+||.-..+.+.+.+.- .+..+..+.|+||++. .+|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 37999999999999998887776555420 1234577889999988 88887666655
Q ss_pred hc
Q 035721 306 GE 307 (308)
Q Consensus 306 ~~ 307 (308)
.+
T Consensus 443 ~f 444 (454)
T KOG1282|consen 443 RF 444 (454)
T ss_pred HH
Confidence 44
|
|
| >PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins | Back alignment and domain information |
|---|
Probab=87.34 E-value=5.3 Score=27.00 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=22.8
Q ss_pred CCcceEEEEccCCCccchHH-HHHHHHHHHcCC
Q 035721 56 KTLGVLCVVHGFTGESSWIV-QLTAVLFAKSGF 87 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~g~ 87 (308)
+.+|.|+-+||+.|++..+. +-+++.|-..|.
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 56899999999999887443 355666655553
|
Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins ( |
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.58 E-value=9.1 Score=27.68 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=30.3
Q ss_pred CcceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecC
Q 035721 57 TLGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.++.+|++.|+.+++.. .-..+.+.|.+.|++++..|=
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 36789999999887653 335678888899999999983
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.27 E-value=2.2 Score=36.05 Aligned_cols=40 Identities=28% Similarity=0.289 Sum_probs=30.9
Q ss_pred CCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGI 169 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~ 169 (308)
+.+||.++|+|+|+.+.......- -+.|..+++++++...
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 667999999999999988665522 2458889999887654
|
|
| >COG3340 PepE Peptidase E [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.31 E-value=4.9 Score=29.82 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=31.2
Q ss_pred cceEEEEccCCCccch--HHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESSW--IVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+.|.|++-.+.+..+ |.+...+.|.+.|..+..+++-
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 5689999998887765 6678888999999999888763
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 308 | ||||
| 3pe6_A | 303 | Crystal Structure Of A Soluble Form Of Human Mgll I | 2e-18 | ||
| 3jwe_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase In | 8e-18 | ||
| 3hju_A | 342 | Crystal Structure Of Human Monoglyceride Lipase Len | 9e-18 | ||
| 3jw8_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase Le | 2e-16 |
| >pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In Complex With An Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In Complex With Sar629 Length = 320 | Back alignment and structure |
|
| >pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase Length = 342 | Back alignment and structure |
|
| >pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase Length = 320 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 308 | |||
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 1e-93 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 3e-89 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 2e-34 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 9e-30 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 1e-28 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 1e-20 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 2e-20 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 6e-17 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 5e-14 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 9e-12 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 1e-11 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 2e-11 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 2e-11 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 5e-11 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 5e-11 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 5e-11 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 6e-11 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 6e-11 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 2e-10 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 2e-10 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 2e-10 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 5e-10 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 7e-10 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 7e-10 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 1e-09 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 1e-09 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 2e-09 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 2e-09 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 2e-09 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 3e-09 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 3e-09 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 4e-09 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 2e-08 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 3e-08 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 4e-08 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 7e-08 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 7e-08 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 8e-08 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 9e-08 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 1e-07 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 1e-07 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 1e-07 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 2e-07 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 4e-07 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 5e-07 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 8e-07 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 8e-07 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 1e-06 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 1e-06 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 1e-06 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 1e-06 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 2e-06 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 2e-06 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 3e-06 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 7e-06 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 1e-05 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 1e-05 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 1e-05 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 3e-05 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 3e-05 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 4e-05 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 4e-05 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 6e-05 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 6e-05 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 7e-05 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 9e-05 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 2e-04 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 2e-04 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 3e-04 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 3e-04 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 5e-04 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 5e-04 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 7e-04 |
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 280 bits (717), Expect = 1e-93
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 9/306 (2%)
Query: 4 HPVAEANEQSLFGSLTPDEFYARHSVSHSSE-YITNSRGLRLFTQWWTPLPPAKTLGVLC 62
H A ++ S+ + ++ N+ G LF ++W P K ++
Sbjct: 7 HHHHGAGDRGPEFPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPK--ALIF 64
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
V HG GE S + A + A DH GHG S+G + D + V D + D
Sbjct: 65 VSHGA-GEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVD 123
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
S + + P LP FL S+GGAIA+ + G + G++L + + + + +
Sbjct: 124 SMQKDY-PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV-LA 181
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL 242
+ ++P + P S ++S + + + + S P A + ++LL +
Sbjct: 182 AKVLNLVLPNLSLGPIDSS--VLS-RNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRV 238
Query: 243 QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVE 302
+ ++ VP L+ G D +CD L + A S+DKTL IY G +H L E E
Sbjct: 239 ERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 298
Query: 303 LVFGEM 308
VF E+
Sbjct: 299 SVFHEI 304
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 3e-89
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93
++ N+ G LF ++W P K ++ V HG GE S + A + A D
Sbjct: 20 PHLVNADGQYLFCRYWAPTGTPK--ALIFVSHGA-GEHSGRYEELARMLMGLDLLVFAHD 76
Query: 94 HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153
H GHG S+G + D + V D + DS + + P LP FL S+GGAIA+ +
Sbjct: 77 HVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY-PGLPVFLLGHSMGGAIAILTAAER 135
Query: 154 KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213
G + G++L + + + + + + ++P P V + + +
Sbjct: 136 PGHFAGMVLISPLVLANPESATTFKV-LAAKVLNSVLPNLSSGPID---SSVLSRNKTEV 191
Query: 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273
+ S P A + ++LL ++ ++ VP L+ G D +CD L
Sbjct: 192 DIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLM 251
Query: 274 KRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ A S+DKTL IY G +H L E E VF E+
Sbjct: 252 ELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEI 286
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-34
Identities = 54/280 (19%), Positives = 97/280 (34%), Gaps = 40/280 (14%)
Query: 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFAT 89
SH SE G F P+ GVL V HGFTG + ++ A +AK+G+
Sbjct: 19 SHMSEQYPVLSGAEPFYAENGPV------GVLLV-HGFTG-TPHSMRPLAEAYAKAGYTV 70
Query: 90 CAIDHQGHGFSDG--LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL 147
C +GHG D V + + R F+ S+GG + L
Sbjct: 71 CLPRLKGHGTHYEDMERTTFHDW---VASVEEGYGWLKQRCQT---IFVTGLSMGGTLTL 124
Query: 148 YITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207
Y+ + +N A+ P A + + S+
Sbjct: 125 YLAEHHPDICGIVPINAAV-------DIPAIA-------AGMTGGGELPRYLDSIGSDLK 170
Query: 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267
+ K L+ + P A + L+L R+ + + + + P LI +D V P
Sbjct: 171 NPDVKE---LAYEKTPTA-----SLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPG 222
Query: 268 CVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307
+ +++ +S +K + +H + + ++
Sbjct: 223 NADIIFQGISSTEKEIVRLRNSYHVATLDYD--QPMIIER 260
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 9e-30
Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 27/240 (11%)
Query: 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
VL + HGFTG +S V++ G+ A ++GHG + H + +D +
Sbjct: 18 AVLLL-HGFTG-NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHT-GPDDWWQDVM 74
Query: 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178
+ ++ + + + SLGG +L + +G++ A I +
Sbjct: 75 NGYEFLKNKGYE--KIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEG 130
Query: 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV 238
+ + M FK+ T L +
Sbjct: 131 VLEYAREYKKREGKSEEQIEQ---EMEKFKQTP-----------------MKTLKALQEL 170
Query: 239 SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298
D++ + + P + D + +P +Y S K + Y H + + E
Sbjct: 171 IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQE 230
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-28
Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 36/251 (14%)
Query: 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVEDA 117
GV+ + H +TG S + A +SG+ GHG + L + + ++
Sbjct: 24 GVVLL-HAYTG-SPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAES 81
Query: 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177
+ A++A F++ SLGG A+ G G + + + P +
Sbjct: 82 SAAVAHMTAKYAK---VFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF 138
Query: 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR 237
+ E R S + + +
Sbjct: 139 LK---------------------------YAEYMNRLAGKSDESTQILAYLPGQLAAIDQ 171
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA-SKDKTLSIYPGMWHQLIGE 296
+ + V+ P I G D + D +L + Y H +
Sbjct: 172 FATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVN 231
Query: 297 PEENVELVFGE 307
+ +
Sbjct: 232 SA--HHALEED 240
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 88.9 bits (220), Expect = 1e-20
Identities = 36/268 (13%), Positives = 68/268 (25%), Gaps = 32/268 (11%)
Query: 34 EYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI 92
+ + G L P + + GF L A + +GF
Sbjct: 10 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGL-AEYLSTNGFHVFRY 68
Query: 93 DHQGH-GFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151
D H G S G + + + + + + L + SL +A +
Sbjct: 69 DSLHHVGLSSGSIDEF-TMTTGKNSLCTVYHWLQTKGTQ--NIGLIAASLSARVAYEVIS 125
Query: 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211
+ LI + + + ++L + L P V ++ +
Sbjct: 126 DLEL--SFLITAVGVVNLRDTLEKALGFDYLSLPIDEL-PNDLDFEGHKLGSEVFVRDCF 182
Query: 212 KRKLA-LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVE 270
+ L S VA VP++ +D V
Sbjct: 183 EHHWDTLDSTLDKVAN----------------------TSVPLIAFTANNDDWVKQEEVY 220
Query: 271 ELYKRAASKDKTLSIYPGMWHQLIGEPE 298
++ + L G H L
Sbjct: 221 DMLAHIRTGHCKLYSLLGSSHDLGENLV 248
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-20
Identities = 50/286 (17%), Positives = 82/286 (28%), Gaps = 58/286 (20%)
Query: 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG--ESSWIVQLTAVLFAKSGFAT 89
S + G++L P + + ++HGFTG E IV + + G AT
Sbjct: 1 SGAMYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAV-QETLNEIGVAT 59
Query: 90 CAIDHQGHGFSDG--LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL 147
D GHG SDG + + + ++ D + ++ S GG +
Sbjct: 60 LRADMYGHGKSDGKFEDHTLFKW---LTNILAVVDYAKKLDFVT-DIYMAGHSQGGLSVM 115
Query: 148 YITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207
++ LI +S P
Sbjct: 116 LAAAMERDIIKALIP------LS--------------------------------PAAMI 137
Query: 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHG 258
E + L P P A + ++ ++ ++ P+LI HG
Sbjct: 138 PEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHG 197
Query: 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELV 304
D K+ K+ L PG H E E V
Sbjct: 198 DQDEAVPYEASVAFSKQY--KNCKLVTIPGDTHCYDHHLELVTEAV 241
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 6e-17
Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 39/280 (13%)
Query: 24 YARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG--ESSWIVQLTAVL 81
+ GL+L P + ++ HGFT +S + ++ A
Sbjct: 14 RENLYFQGMATITLERDGLQLVGTREEPFGEIYDMAIIF--HGFTANRNTSLLREI-ANS 70
Query: 82 FAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESL 141
A+ D GHG SDG ++ + +EDA + + + +L +
Sbjct: 71 LRDENIASVRFDFNGHGDSDGKFENM-TVLNEIEDANAILNYVKTDPHVR-NIYLVGHAQ 128
Query: 142 GGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS 201
GG +A + ++L + L + +P R
Sbjct: 129 GGVVASMLAGLYPDLIKKVVLLAPA--------ATLKGDALEGNTQGVTYNPDHIPDRLP 180
Query: 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261
++ + L + + + + P+ + HG DD
Sbjct: 181 FKDLTLGGFY---------------------LRIAQ-QLPIYEVSAQFTKPVCLIHGTDD 218
Query: 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENV 301
V P ++ + ++ TL + G H ++N
Sbjct: 219 TVVSPNASKKYDQ--IYQNSTLHLIEGADHCFSDSYQKNA 256
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 70.5 bits (172), Expect = 5e-14
Identities = 54/308 (17%), Positives = 91/308 (29%), Gaps = 25/308 (8%)
Query: 5 PVAEANEQSLFGSLTPDE-FYARHSVSHSSEYITNSRGLRLFTQWWTPL-PPAKTLGVLC 62
L + D+ F V H N G+ L + P L +
Sbjct: 41 SNTGGTNMQLQLTQEWDKTFPLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIV 100
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+ F L A A+ GF T A D G S G ++ + ED + D
Sbjct: 101 IGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVD 160
Query: 123 SFRARHAPDLPA-FLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQKFKPPWPL 179
+ + G +AL K A + +S+ + L
Sbjct: 161 FISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDSVTL 220
Query: 180 EHLLFTVAWL---------------VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPV 224
E T+ L P + + + +V + + + PR
Sbjct: 221 EQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGY-HPRAVN 279
Query: 225 ARPRAATALELLRVSRDLQGRFEEVE-VPMLICHGGDDVVCDPACVEELYKRAASKDKTL 283
+ L ++ + +E+ P+L+ HG + E AA++ K L
Sbjct: 280 SGNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAHSRYFS---ETAYAAAAEPKEL 336
Query: 284 SIYPGMWH 291
I PG H
Sbjct: 337 LIVPGASH 344
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 9e-12
Identities = 34/214 (15%), Positives = 61/214 (28%), Gaps = 9/214 (4%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HG + + + L + +D G G SD + V+E I +
Sbjct: 27 LHGLSLDKQSTCLFF-EPLSNVGQYQRIYLDLPGMGNSD--PISPSTSDNVLETLIEAIE 83
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
LY S GG +A I K G+ L + + ++
Sbjct: 84 ----EIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINI 139
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE-LLRVSRD 241
L V S+ ++ + W L P L+ + +
Sbjct: 140 LEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFE 199
Query: 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+ + + P I G +D V +L
Sbjct: 200 EKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINH 233
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 1e-11
Identities = 43/267 (16%), Positives = 71/267 (26%), Gaps = 33/267 (12%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG--ESSWIVQLTAVLFAKSGFA 88
H+ S + P + + G+ + +++ + A G
Sbjct: 12 HAITVGQGSDARSIAALVRAPAQDERPTCIWL--GGYRSDMTGTKALEMDDLA-ASLGVG 68
Query: 89 TCAIDHQGHGFSDG--LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIA 146
D+ GHG S G I +E+A++ D F+ A L S+GG IA
Sbjct: 69 AIRFDYSGHGASGGAFRDGTISRW---LEEALAVLDHFKPE-----KAILVGSSMGGWIA 120
Query: 147 LYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206
L + K D M I+ L L
Sbjct: 121 LRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSP 180
Query: 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266
+ R L V + P+ I G D
Sbjct: 181 EPNIFTRALMEDGRANRVMAGMI------------------DTGCPVHILQGMADPDVPY 222
Query: 267 ACVEELYKRAASKDKTLSIYPGMWHQL 293
+L + + D L++ H+L
Sbjct: 223 QHALKLVEHLPADDVVLTLVRDGDHRL 249
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 2e-11
Identities = 35/259 (13%), Positives = 64/259 (24%), Gaps = 44/259 (16%)
Query: 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107
+ + ++ G Q+ L G AT D G G
Sbjct: 142 YVRIPEGPGPHPAVIMLGGLESTKEESFQM-ENLVLDRGMATATFDGPGQGEMFEYKRIA 200
Query: 108 PDLNPVVEDAISFFDSFRARHAPDL-PAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166
D + + D A + SLGG AL + I G
Sbjct: 201 GD---YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGF 256
Query: 167 CGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVAR 226
L++ +W+ V +L EE + + +
Sbjct: 257 ----------SDLDYWDLETPLTKESWKYVSKVDTL------EEARLHVHAAL------- 293
Query: 227 PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286
+ + ++ P I HG D V + V+ + + ++ L +
Sbjct: 294 --------------ETRDVLSQIACPTYILHGVHDEVP-LSFVDTVLELVPAEHLNLVVE 338
Query: 287 PGMWHQLIGEPEENVELVF 305
H +
Sbjct: 339 KDGDHCCHNLGIRPRLEMA 357
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 62.7 bits (151), Expect = 2e-11
Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 15/200 (7%)
Query: 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP------DLNPV 113
V +G + + A++GF ID++ H L +
Sbjct: 67 VTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTW 126
Query: 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL-YITLRQKGAWDGLILNGAMCGISQK 172
+ D + +L ES GG AL Y +L K GLIL
Sbjct: 127 ISDIKEVVSFIKRDS-GQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG-PTKHG 184
Query: 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATA 232
+P + + V+P+RG + AL++P P P+ +
Sbjct: 185 IRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSY------ALANPDMPSPDPKYKSI 238
Query: 233 LELLRVSRDLQGRFEEVEVP 252
+ L S + G + P
Sbjct: 239 SDFLMDSLYVTGSANPYDYP 258
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 40/222 (18%), Positives = 73/222 (32%), Gaps = 22/222 (9%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HGF +S + + F + ID GHG + + + + D
Sbjct: 22 LHGFLSDSRTYHNHIEK--FTD-NYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILD 78
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS--------QKFK 174
++ + L+ S+GG +ALY + LIL GI +
Sbjct: 79 KYKDK-----SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVD 133
Query: 175 PPWPLEHLLFTVAWLVPTWRVVP-TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATAL 233
+ + V W +P + L + + R+ LS +A+
Sbjct: 134 DARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYG- 192
Query: 234 ELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+L R +E++VP LI G D +++
Sbjct: 193 --TGQMPNLWPRLKEIKVPTLILAGEYDEKF-VQIAKKMANL 231
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 5e-11
Identities = 53/315 (16%), Positives = 94/315 (29%), Gaps = 46/315 (14%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
AE+ + L E + + ++ + + RG R+ P + L + G
Sbjct: 45 AESEKFPLDPVFERMESHLKTVEAYDVTF-SGYRGQRIKGWLLVPKLEEEKLPCVVQYIG 103
Query: 67 FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126
+ G + + + G+ +D +G G V+ F +
Sbjct: 104 YNGGRGFPHD--WLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMT--- 158
Query: 127 RHAPDLPAFLYSESLGGAIALYITLRQKGAWDG--LILNG---------AMCGISQKFK- 174
R D + Y A+ D +++ G A+ +S+K K
Sbjct: 159 RGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKA 218
Query: 175 ----PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAA 230
P+ L H V + T +E R L+ AR
Sbjct: 219 LLCDVPF-LCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR---- 273
Query: 231 TALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290
++P L G D +C P+ V Y A K + IYP
Sbjct: 274 ------------------AKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNN 314
Query: 291 HQLIGEPEENVELVF 305
H+ G + ++ F
Sbjct: 315 HEGGGSFQAVEQVKF 329
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 41/223 (18%), Positives = 71/223 (31%), Gaps = 21/223 (9%)
Query: 64 VHGF----TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119
+HG TG +++ + ++G+ +D G G SD +V + S
Sbjct: 42 LHGSGPGATGWANFSRNIDP--LVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKS 99
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
D L S+GG ++ TL+ L+L G G F P P
Sbjct: 100 VVDQLDIAKIH-----LLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF-TPMPT 153
Query: 180 EHL-LFTVAWLVPTWRVVPTRGSLPMVSF------KEEWKRKLALSSPRRPVARPRAATA 232
E + + PT + + + + F ++ +L RR +
Sbjct: 154 EGIKRLNQLYRQPTIENL--KLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSL 211
Query: 233 LELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+ D R E++ LI G +D L
Sbjct: 212 EANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSG 254
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 6e-11
Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 27/221 (12%)
Query: 59 GVLCVVHGF--TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA--HIPDLNPVV 114
+ ++ G +GE+ + QL K F A D +G+G S
Sbjct: 24 HAVLLLPGMLGSGETDFGPQLKN--LNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDA 81
Query: 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK 174
+DA+ + + + L S GG AL + +++ GA ++ +
Sbjct: 82 KDAVDLMKALKFK-----KVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDE-- 134
Query: 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE 234
E + W T + + + ++ R +
Sbjct: 135 DSMIYEGIRDVSKWSERTRKPLEAL-------YGYDY-------FARTCEKWVDGIRQFK 180
Query: 235 LLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
L + V+ P LI HG D + + ++K
Sbjct: 181 HLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKH 221
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 6e-11
Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 21/223 (9%)
Query: 64 VHGF----TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119
+HG G S++ + + +G+ D G SD +V
Sbjct: 39 LHGGGPGAGGWSNYYRNVGPFV--DAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 96
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
D+ A L ++GGA AL L LIL G G+ P P+
Sbjct: 97 LMDALDIDRAH-----LVGNAMGGATALNFALEYPDRIGKLILMGPG-GLGPSMFAPMPM 150
Query: 180 EHL-LFTVAWLVPTWRVVPTRGSLPMVSF------KEEWKRKLALSSPRRPVARPRAATA 232
E + L + P++ + + L + + +E + + + + +A
Sbjct: 151 EGIKLLFKLYAEPSYETL--KQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISA 208
Query: 233 LELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+ + D+ R E++ I G DD +L
Sbjct: 209 QKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWN 251
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-10
Identities = 42/243 (17%), Positives = 73/243 (30%), Gaps = 35/243 (14%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HG+ SW Q+ A ++G+ D +G G S + + D +
Sbjct: 33 IHGWPLSGRSWEYQVPA--LVEAGYRVITYDRRGFGKSS-QPWEGYEYDTFTSDLHQLLE 89
Query: 123 SFRARHAPDLPAFLYSESLGGAIAL-YITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
+ L S+GG YI+ + ++ GA+ K P
Sbjct: 90 QLELQ-----NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYK-SEDHPEGA 143
Query: 182 LLFTVA----------------WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA 225
L + R L SF+ A +SP+ +
Sbjct: 144 LDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLD 203
Query: 226 RPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285
A + D + E+ +P LI HG D +L A + +++
Sbjct: 204 CITAFSKT-------DFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAI-PNSKVAL 255
Query: 286 YPG 288
G
Sbjct: 256 IKG 258
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 2e-10
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQ 95
+ G R+F + +++ L HG+ +S W ++K G+ A D+
Sbjct: 10 DVNGTRVFQRKMVTDSNRRSI-ALF--HGY-SFTSMDWDKADLFNNYSKIGYNVYAPDYP 65
Query: 96 GHGFSDGLVAHIP---DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152
G G S + DL E + + + + S+GG + + TL+
Sbjct: 66 GFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVA-----RSVIMGASMGGGMVIMTTLQ 120
Query: 153 QKGAWDGLILNGAMCGISQKFKPPW 177
DG+I S K
Sbjct: 121 YPDIVDGIIAVAPAWVESLKGDMKK 145
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-10
Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 18/216 (8%)
Query: 64 VHGF----TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119
+HG + ++W + + A +K + A D G GF+D + + V+ I
Sbjct: 31 IHGSGPGVSAYANWRLTIPA--LSK-FYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIG 87
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
D+ A + + GG +A+ LR D ++L GA +F L
Sbjct: 88 IMDALEIE-----KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGT---RFDVTEGL 139
Query: 180 EHLLF---TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL 236
+ ++ + + SL + + +
Sbjct: 140 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWI 199
Query: 237 RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
+ + LI HG +D V + L
Sbjct: 200 DALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRL 235
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 5e-10
Identities = 33/265 (12%), Positives = 72/265 (27%), Gaps = 28/265 (10%)
Query: 49 WTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108
+ + K L VV G + + + + +D G G +
Sbjct: 150 YAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPN---QGL 206
Query: 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168
AIS + + + S GG + K I + +
Sbjct: 207 HFEVDARAAISAILDWYQAPTEKI--AIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263
Query: 169 ISQKFKP--PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVAR 226
+++ F+ L+ + W V + + + ++ + ++S + +
Sbjct: 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQ 323
Query: 227 PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK--RAASKDKTLS 284
+ +++VP L G + + LY + D TL
Sbjct: 324 --------------AQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLR 369
Query: 285 IYP----GMWHQLIGEPEENVELVF 305
+ H + VF
Sbjct: 370 KFSSESGADAHCQVNNFRLMHYQVF 394
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 7e-10
Identities = 40/269 (14%), Positives = 62/269 (23%), Gaps = 39/269 (14%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP--DLNPVVEDAISF 120
V G + W + L G DH+ G S + DA++
Sbjct: 29 VMGGNLSALGWPDEFARRLADG-GLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAV 87
Query: 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180
D + A + S+G I I L L + +
Sbjct: 88 LDGWGVD-----RAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVM 142
Query: 181 HLLFTVAWLVPTWRVVPTRGSL------------------------PMVSFKEEWKRKLA 216
T+ L + +L V F + +
Sbjct: 143 RGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWE 202
Query: 217 LSSPRRPVARPRAATA-LELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+ A L EV VP L+ D + + L
Sbjct: 203 ERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHL--A 260
Query: 276 AASKDKTLSIYPGMWHQLIGEPEENVELV 304
L+ PGM H L P +
Sbjct: 261 GLIPTARLAEIPGMGHAL---PSSVHGPL 286
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 7e-10
Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 33/241 (13%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
HG+ ++ W Q+ + G+ T A D +G G SD D + +D +
Sbjct: 25 SHGWLLDADMWEYQMEY--LSSRGYRTIAFDRRGFGRSD-QPWTGNDYDTFADDIAQLIE 81
Query: 123 SFRARHAPDLPAFLYSESLGGA-IALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
+ L S+GG +A YI GL+L GA+ + + KP +P
Sbjct: 82 HLDLK-----EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ-KPDYPQGV 135
Query: 182 LLFTVAWL--------------VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARP 227
L A +G + + + + L+S + V
Sbjct: 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCV 195
Query: 228 RAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP 287
A D + +++VP L+ HG D + ++ K L +Y
Sbjct: 196 TAFAE-------TDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELI-KGAELKVYK 247
Query: 288 G 288
Sbjct: 248 D 248
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 1e-09
Identities = 39/264 (14%), Positives = 64/264 (24%), Gaps = 52/264 (19%)
Query: 33 SEYIT-NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCA 91
I L P GVL VHG+ G + A G
Sbjct: 6 LSSIEIPVGQDELSG-TLLT--PTGMPGVL-FVHGWGGSQHHSLVR-AREAVGLGCICMT 60
Query: 92 IDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDL-PAFLYSESLGGAIALYIT 150
D +GH + ++D + +D + D + S GG ++ +T
Sbjct: 61 FDLRGHEGYASMRQS-VTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLT 119
Query: 151 LRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210
+ W L + W K
Sbjct: 120 RERPVEWLALR----------------------SPALYKDAHWD-----------QPKVS 146
Query: 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVE 270
L RR P AL + + +L+ +DV+ +
Sbjct: 147 LNADPDLMDYRRRALAPGDNLALAACA----------QYKGDVLLVEAENDVIVPHPVMR 196
Query: 271 ELYKRA-ASKDKTLSIYPGMWHQL 293
++ T + G H L
Sbjct: 197 NYADAFTNARSLTSRVIAGADHAL 220
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 57.7 bits (139), Expect = 1e-09
Identities = 31/248 (12%), Positives = 65/248 (26%), Gaps = 37/248 (14%)
Query: 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107
K V+ V G + + +L AK A +D G+S
Sbjct: 183 HLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT- 241
Query: 108 PDLNPVVEDAISFFDSFRARHAPDLPA---FLYSESLGGAIALYITLRQKGAWDGLILNG 164
D + + + ++ P + L GG + ++ ++ ++ G
Sbjct: 242 EDYSRLHQAVLNE-----LFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILG 296
Query: 165 AMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPV 224
A H +F + + + LA + V
Sbjct: 297 API-------------HDIFASPQKLQQMP--------------KMYLDVLASRLGKSVV 329
Query: 225 ARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLS 284
+ + + + +VP+L D V + + + + K
Sbjct: 330 DIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYG-KAKK 388
Query: 285 IYPGMWHQ 292
I Q
Sbjct: 389 ISSKTITQ 396
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 50/271 (18%), Positives = 83/271 (30%), Gaps = 40/271 (14%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAID 93
T G+ +F + W P V +HG+ +W QL A +G+ A D
Sbjct: 2 ICTTRDGVEIFYKDWGQGRPV----VF--IHGWPLNGDAWQDQLKA--VVDAGYRGIAHD 53
Query: 94 HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL-YITLR 152
+GHG S V D + +D R L + S+GG Y+
Sbjct: 54 RRGHGHST-PVWDGYDFDTFADDLNDLLTDLDLR-----DVTLVAHSMGGGELARYVGRH 107
Query: 153 QKGAWDGLILNGAMCGISQKFKPPWP----------LEHLLFT-----VAWLVPTWRVVP 197
G +L A+ + K P L++ + T +
Sbjct: 108 GTGRLRSAVLLSAIPPVMIK-SDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSAN 166
Query: 198 TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257
G+ K+ + + V A D ++ ++P L+ H
Sbjct: 167 RPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-------TDFTEDLKKFDIPTLVVH 219
Query: 258 GGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
G DD V + + L +Y G
Sbjct: 220 GDDDQVVPIDATGRKSAQII-PNAELKVYEG 249
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 45/225 (20%), Positives = 72/225 (32%), Gaps = 24/225 (10%)
Query: 64 VHGF-TGESSWI-VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121
+HG G +SW + A+ F A+D G+G SD H F
Sbjct: 42 LHGGGPGAASWTNFSRNIAVLAR-HFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLF 100
Query: 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
D P L +LGG A+ L L+L G G+S P P E
Sbjct: 101 DQLGLGRVP-----LVGNALGGGTAVRFALDYPARAGRLVLMGPG-GLSINLFAPDPTEG 154
Query: 182 LLFTVAWLV-PTWRVVPTRGSLPMVSF------KEEWKRKLALSSPRRPVAR----PRAA 230
+ + V PT + L ++ + E ++ AL+ P +
Sbjct: 155 VKRLSKFSVAPTRENL--EAFLRVMVYDKNLITPELVDQRFALA--STPESLTATRAMGK 210
Query: 231 TALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
+ + + + P+L+ G +D V K
Sbjct: 211 SFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKT 255
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 32/237 (13%), Positives = 65/237 (27%), Gaps = 24/237 (10%)
Query: 64 VHGF-TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH-IPDLNPVVEDAISFF 121
+ G +W A G+ D++G G ++ + V D +
Sbjct: 49 IAGRGGAGRTWHPHQVPAFLAA-GYRCITFDNRGIGATENAEGFTTQTM---VADTAALI 104
Query: 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
++ PA + S+G IA + + +L + + + E
Sbjct: 105 ETLDIA-----PARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEA 159
Query: 182 LLFT-------VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE 234
L+ +R +L +W ++ +
Sbjct: 160 ELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA- 218
Query: 235 LLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH 291
+ + + P+L+ DDVV P E+ A + P H
Sbjct: 219 ---PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREV--ADALPNGRYLQIPDAGH 270
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 3e-09
Identities = 39/219 (17%), Positives = 74/219 (33%), Gaps = 20/219 (9%)
Query: 64 VHGF----TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119
+HG E +W + A+ + A+D G G + PD+ + I
Sbjct: 42 IHGGGAGAESEGNWRNVIPI--LAR-HYRVIAMDMLGFGKTA-----KPDIEYTQDRRIR 93
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179
F D + S+GGA L +++ + L+L G+ + + + P+
Sbjct: 94 HLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPI 153
Query: 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS 239
+ FT +V + + G + + + R ++ +R
Sbjct: 154 INYDFTREGMVHLVKALTNDGFK--ID-DAMINSRYTYA--TDEATRKAYVATMQWIREQ 208
Query: 240 RDLQGRFE---EVEVPMLICHGGDDVVCDPACVEELYKR 275
L E +V+VP L+ G DD V +
Sbjct: 209 GGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDL 247
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 3e-09
Identities = 41/284 (14%), Positives = 75/284 (26%), Gaps = 59/284 (20%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
Y T RG R+ + L HG++ S + + +GF A+D
Sbjct: 86 YFTGVRGARIHA-KYIKPKTEGKHPALIRFHGYSSNSGDWND--KLNYVAAGFTVVAMDV 142
Query: 95 QGHGFSDGLVAHIPD-------------------LNPVVEDAISFFDSFRARHAPDLPA- 134
+G G V + + D P++
Sbjct: 143 RGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNM--PEVDED 200
Query: 135 --FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192
+ S GG ++L + + + + + +
Sbjct: 201 RVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAK----NAYQEITDY 256
Query: 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP 252
+R+ R E KL + R ++
Sbjct: 257 FRLFDPRHERE-----NEVFTKLGYIDVKNLAKR----------------------IKGD 289
Query: 253 MLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE 296
+L+C G D VC P+ V Y K + +YP H+ +
Sbjct: 290 VLMCVGLMDQVCPPSTVFAAYNNIQ-SKKDIKVYPDYGHEPMRG 332
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 4e-09
Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 20/246 (8%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFAT 89
H ++ + + L + P +L +HG + +W + A +G+
Sbjct: 21 HYLDFTSQGQPLSMAYLDVAPKKANGRTILL--MHGKNFCAGTWERTIDV--LADAGYRV 76
Query: 90 CAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYI 149
A+D G S + + + + + A + S+GG +A
Sbjct: 77 IAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVA-----RASVIGHSMGGMLATRY 131
Query: 150 TLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK- 208
L + L+L + K + L + + + +
Sbjct: 132 ALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEW 191
Query: 209 ----EEWKRKLA---LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261
+ W + A R VA A T + + + + +++P L+ G D
Sbjct: 192 RPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFT--QPVVYELDRLQMPTLLLIGEKD 249
Query: 262 VVCDPA 267
Sbjct: 250 NTAIGK 255
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 24/226 (10%)
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH-IPDLNPVVEDAISFFD 122
VHG +L L + +D +GHG S G + +++ +F
Sbjct: 22 VHGSGCNLKIFGELEKYL---EDYNCILLDLKGHGESKGQCPSTVYGY---IDNVANFIT 75
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
+ L S+GGAI L + L++ ++ + G ++ K
Sbjct: 76 NSEVTKHQK-NITLIGYSMGGAIVLGVALKKLPNVRKVVS---LSGGARFDKLDKDFMEK 131
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL 242
++ + L + + + + + L ++ DL
Sbjct: 132 IYH--------NQLDNNYLLECIGGIDNPLSEKYFETLEK--DPDIMINDLIACKLI-DL 180
Query: 243 QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
+ +++P+ D+++ E + K ++ L I+
Sbjct: 181 VDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV--ENSELKIFET 224
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 37/232 (15%), Positives = 57/232 (24%), Gaps = 19/232 (8%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
V G A F D +G G S + + +ED + D
Sbjct: 29 VGGALSTRAGGAPLAER--LAP-HFTVICYDRRGRGDSGDTPPY--AVEREIEDLAAIID 83
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
A AF++ S G ++L + + PP P ++
Sbjct: 84 ------AAGGAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSR--PPVPPDYQ 135
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR-- 240
A L R + +P P A T V
Sbjct: 136 TRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDN 195
Query: 241 -DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH 291
RF + +P L+ GG +EL + H
Sbjct: 196 TIPTARFASISIPTLVMDGGASPAWIRHTAQEL--ADTIPNARYVTLENQTH 245
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 49/288 (17%), Positives = 87/288 (30%), Gaps = 25/288 (8%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
A E FG + A + H + + L + P +L HG
Sbjct: 23 AVLEENLYFGGSFTMDMAADIASDHFISRRVDIGRITLNVREKGSGPL-----MLFF-HG 76
Query: 67 FTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFR 125
T S + + + F T A+D +GHG SD + N +D +
Sbjct: 77 ITSNSAVFEPLMIR--LSD-RFTTIAVDQRGHGLSDK-PETGYEANDYADDIAGLIRTLA 132
Query: 126 ARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185
A L SLG ++ + ++ I + LE +
Sbjct: 133 RG-----HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETE--ALDALEARVNA 185
Query: 186 VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR----- 240
+ L + V + + + R A S + R + + +
Sbjct: 186 GSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRS 245
Query: 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
DL + +V P+LI G + A + + D + + PG
Sbjct: 246 DLVPAYRDVTKPVLIVRGESSKLVSAAALAKT--SRLRPDLPVVVVPG 291
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 7e-08
Identities = 46/231 (19%), Positives = 73/231 (31%), Gaps = 23/231 (9%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HG+ + W + F +D G G S G A L + E +
Sbjct: 19 LHGWGLNAEVWRCIDEE--LSS-HFTLHLVDLPGFGRSRGFGA--LSLADMAEAVL---- 69
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLIL-NGAMCGISQKFKPPWPLEH 181
+ APD A SLGG +A I L L+ + C ++ P +
Sbjct: 70 ----QQAPD-KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDV 124
Query: 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK---RKLALSSPRRPVARPRAATA-LELLR 237
L L + R E + R L + P+ LE+L+
Sbjct: 125 LAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK 184
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
+ DL+ + V +P L +G D + V L I+
Sbjct: 185 -TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML--DKLWPHSESYIFAK 232
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-08
Identities = 43/243 (17%), Positives = 70/243 (28%), Gaps = 35/243 (14%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
HG+ + SW Q+ A G+ A D +GHG S D++ +D +
Sbjct: 25 SHGWPLNADSWESQMIF--LAAQGYRVIAHDRRGHGRSS-QPWSGNDMDTYADDLAQLIE 81
Query: 123 SFRARHAPDLPAFLYSESLGGAIAL-YITLRQKGAWDGLILNGAMCGISQKFKPPWPL-- 179
R A L+ S GG YI L A+ + K P
Sbjct: 82 HLDLR-----DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLK-TEANPGGL 135
Query: 180 --------------EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA 225
+ + G+ + + + + +
Sbjct: 136 PMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYD 195
Query: 226 RPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285
+A + D ++++VP L+ HG D V K TL I
Sbjct: 196 CIKAFSE-------TDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALV-KGSTLKI 247
Query: 286 YPG 288
Y G
Sbjct: 248 YSG 250
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 8e-08
Identities = 40/235 (17%), Positives = 68/235 (28%), Gaps = 19/235 (8%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HGF SW Q A +G+ D +G G S D + D + +
Sbjct: 30 IHGFPLSGHSWERQSAA--LLDAGYRVITYDRRGFGQSS-QPTTGYDYDTFAADLNTVLE 86
Query: 123 SFRARHAPDLPAFLYSESLGGA-IALYITLRQKGAWDGLILNGAMCGISQKFKPPW---- 177
+ + A L S+G +A Y++ + ++ K
Sbjct: 87 TLDLQ-----DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAA 141
Query: 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL---ALSSPRRPVARPRAATALE 234
P E VA + T + E ++ A+ + A A
Sbjct: 142 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 201
Query: 235 LLRV-SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
D + ++VP LI HG D ++ +A G
Sbjct: 202 APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEG 255
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 9e-08
Identities = 34/229 (14%), Positives = 69/229 (30%), Gaps = 22/229 (9%)
Query: 61 LCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP-DLNPVVEDAI 118
LCV H ++ + + F ++ ++ +G G SD + ++D
Sbjct: 26 LCVTHLYSEYNDNGNTFANP--FTD-HYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLE 82
Query: 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA------MCGISQK 172
+ ++ S GG +AL + + +I+ GA
Sbjct: 83 AIREALYINK-----WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSI 137
Query: 173 FKPPWPLEHLL------FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVAR 226
+ + + V R +R M + EE +
Sbjct: 138 YCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVG 197
Query: 227 PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
R ++ D++ + + V++P I G DV C E+
Sbjct: 198 NRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANL 246
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 30/226 (13%)
Query: 64 VHGF----TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119
+HG S+W + A+ F A D G G S+ + + V
Sbjct: 35 LHGAGPGAHAASNWRPIIPD--LAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWVG---- 87
Query: 120 FFDSFRARHAPDL-------PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172
R L + + S+GGA+ L + + +D + L G++
Sbjct: 88 ----MRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA 143
Query: 173 FKPPWPLEHLLFTVAWLVPTWRVVPTR-GSLPMVSFKEE-WKRKLALSSPRRPVARPRAA 230
P + L P ++ + EE K + ++ P R
Sbjct: 144 RPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA--NDPEVRRIQE 201
Query: 231 TALELLRVSRD----LQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
E ++ + + +L+ HG D + L
Sbjct: 202 VMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYL 247
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 1e-07
Identities = 37/242 (15%), Positives = 64/242 (26%), Gaps = 31/242 (12%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HG+ + SW Q G+ D +G G S V D + D + +
Sbjct: 29 IHGYPLDGHSWERQTRE--LLAQGYRVITYDRRGFGGSS-KVNTGYDYDTFAADLHTVLE 85
Query: 123 SFRARHAPDLPAFLYSESLGGA-IALYITLRQKGAWDGLILNGAMCGISQKFKPPWP--- 178
+ R L S+G +A Y+ L ++ + + P
Sbjct: 86 TLDLR-----DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQ-RDDNPEGV 139
Query: 179 -------LEHLLFT-----VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVAR 226
+E + + + +A+ S PVA
Sbjct: 140 PQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSA--PVAA 197
Query: 227 PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286
A + R P LI HG D + + +A +
Sbjct: 198 YAVVPAW--IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEV 254
Query: 287 PG 288
G
Sbjct: 255 EG 256
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 1e-07
Identities = 46/291 (15%), Positives = 84/291 (28%), Gaps = 46/291 (15%)
Query: 8 EANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGF 67
+ L + + V + R R+ + P P G++ + G
Sbjct: 114 DPEPGRLLCQAQHERHFLPPGVWR-----QSVRAGRVRATLFLPPGPGPFPGII-DIFGI 167
Query: 68 TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127
G +++ A L A GFAT A+ + + L ++ +++ +E
Sbjct: 168 GG---GLLEYRASLLAGHGFATLALAYY---NFEDLPNNMDNIS--LEYFEEAVCYMLQH 219
Query: 128 HAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186
P L SLG I L + K + +NG+ +H
Sbjct: 220 PQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGIS----GNTAINYKHSSIPP 275
Query: 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRF 246
V G + +V + S P+ +
Sbjct: 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPS-MIPIEK-------------------- 314
Query: 247 EEVEVPMLICHGGDDVVCDPA----CVEELYKRAASKDKTLSIYPGMWHQL 293
+ P+L+ G DD V E + + + YPG H +
Sbjct: 315 --AQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYI 363
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 50.9 bits (121), Expect = 2e-07
Identities = 49/285 (17%), Positives = 84/285 (29%), Gaps = 46/285 (16%)
Query: 14 LFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW 73
L + ++ V R R+ + P P G++ + G G
Sbjct: 136 LLCQTRHERYFLPPGVRR-----EPVRVGRVRGTLFLPPEPGPFPGIV-DMFGTGG---G 186
Query: 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP-VVEDAISFFDSFRARHAPDL 132
+++ A L A GFA A+ + + L + L+ E+A+++ S P +
Sbjct: 187 LLEYRASLLAGKGFAVMALAYY---NYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGV 243
Query: 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192
L S GG + L + KG +++NG++ + +
Sbjct: 244 --GLLGISKGGELCLSMASFLKGITAAVVINGSVAN----VGGTLRYKGETLPPVGVNRN 297
Query: 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP 252
V G +V S PV R E
Sbjct: 298 RIKVTKDGYADIVDVLNSPLEGPDQKS-FIPVER----------------------AEST 334
Query: 253 MLICHGGDDVVCDPA-CVEELYKRAASKDK---TLSIYPGMWHQL 293
L G DD E KR + + + YP H +
Sbjct: 335 FLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYI 379
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 4e-07
Identities = 43/253 (16%), Positives = 67/253 (26%), Gaps = 64/253 (25%)
Query: 53 PPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA------H 106
P +L +HG S + +A+ GF A D HG +G +
Sbjct: 19 IPEAPKALLLALHGLQ-GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77
Query: 107 IPDLNPVVEDAISFFDSFRARH--APDLPAFLYSESLGGAIALYITLRQKGAWDGLILNG 164
+ ++ V LP FL SLG +A + L G
Sbjct: 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIG 137
Query: 165 AMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPV 224
+ P L + L+ + P
Sbjct: 138 SG--------FPMKLPQGQV--------------------------VEDPGVLALYQAPP 163
Query: 225 ARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK--RAASKDKT 282
A A VP+L HG D + A +E+ + R +
Sbjct: 164 ATRGEAYG-----------------GVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGR 206
Query: 283 LS--IYPGMWHQL 293
L+ + G H L
Sbjct: 207 LARFVEEGAGHTL 219
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 44/271 (16%), Positives = 76/271 (28%), Gaps = 39/271 (14%)
Query: 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFA 88
+ E G ++ W P + VLC+ HG + +W A G+
Sbjct: 2 NAMEEKFLEFGGNQICLCSWGS--PEHPV-VLCI-HGILEQGLAWQEVALP--LAAQGYR 55
Query: 89 TCAIDHQGHGFSDGLVA----HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGA 144
A D GHG S L + + P L S+G
Sbjct: 56 VVAPDLFGHGRSSHLEMVTSYSSLTF---LAQIDRVIQELPDQ-----PLLLVGHSMGAM 107
Query: 145 IALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL--------VPTWRVV 196
+A I + LIL + K + L + +L P
Sbjct: 108 LATAIASVRPKKIKELILVELPLPAEES-KKESAVNQLTTCLDYLSSTPQHPIFPDVATA 166
Query: 197 PTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-----------RDLQGR 245
+R + S EE+ LA + R + + S
Sbjct: 167 ASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEM 226
Query: 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRA 276
+ ++VP + +G + P +++
Sbjct: 227 LKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM 257
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 47/278 (16%), Positives = 84/278 (30%), Gaps = 45/278 (16%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAID 93
Y+T G+++F + W P A + HG+ + W QL F G+ A D
Sbjct: 3 YVTTKDGVQIFYKDWGP-RDAPVI-HF--HHGWPLSADDWDAQLLF--FLAHGYRVVAHD 56
Query: 94 HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE----------SLGG 143
+GHG S V D +A D+ A + S GG
Sbjct: 57 RRGHGRSS-----------QVWDGHDM-----DHYADDVAAVVAHLGIQGAVHVGHSTGG 100
Query: 144 AIAL-YITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL 202
+ Y+ + +L A+ + + P P +
Sbjct: 101 GEVVRYMARHPEDKVAKAVLIAAVPPLMVQ-TPGNPGGLPKSVFDGFQAQVASNRAQFYR 159
Query: 203 PMVS---------FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253
+ + E + + + + +A + D + ++ P+
Sbjct: 160 DVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219
Query: 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH 291
L+ HG DD + L + + L Y G H
Sbjct: 220 LVMHGDDDQIVPYENSGVLSAKLL-PNGALKTYKGYPH 256
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 36/235 (15%), Positives = 65/235 (27%), Gaps = 19/235 (8%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HGF SW Q A +G+ D +G G S D + D + +
Sbjct: 29 IHGFPLSGHSWERQSAA--LLDAGYRVITYDRRGFGQSS-QPTTGYDYDTFAADLNTVLE 85
Query: 123 SFRARHAPDLPAFLYSESLGGA-IALYITLRQKGAWDGLILNGAMCGISQK-------FK 174
+ + A L S G +A Y++ + ++ K
Sbjct: 86 TLDLQ-----DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAA 140
Query: 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE 234
P + ++ V + + + A+ + A A
Sbjct: 141 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 200
Query: 235 LLRV-SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
D + ++VP LI HG D ++ +A G
Sbjct: 201 APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEG 254
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-06
Identities = 34/161 (21%), Positives = 49/161 (30%), Gaps = 9/161 (5%)
Query: 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSG 86
SV I +G LF + P VL + HG S +W T A++G
Sbjct: 4 SVEQREGTIQ-VQGQALFFREALPGSGQARFSVLLL-HGIRFSSETWQNLGTLHRLAQAG 61
Query: 87 FATCAIDHQGHGFSDGLVAHIP-DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAI 145
+ AID G G S A P + D+ P + S SL G
Sbjct: 62 YRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELG-----PPVVISPSLSGMY 116
Query: 146 ALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186
+L G + +C ++ V
Sbjct: 117 SLPFLTAPGSQLPGFVPVAPICTDKINAANYASVKTPALIV 157
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 36/217 (16%), Positives = 67/217 (30%), Gaps = 23/217 (10%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+ G G S W+ QL + + D +G G + +A + + +
Sbjct: 21 ISGLGGSGSYWLPQLAV--LEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALV 77
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW-PLEH 181
+ + +LG + + + L + LI I+ + + E
Sbjct: 78 AAGIE-----HYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRER 132
Query: 182 LLFT------VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALEL 235
LL++ V + E + LAL+ + R AL
Sbjct: 133 LLYSGGAQAWVEAQPLFLYPADWMAARAPR---LEAEDALALAHFQGKNNLLRRLNAL-- 187
Query: 236 LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
D + + P+ I DD++ AC EL
Sbjct: 188 --KRADFSHHADRIRCPVQIICASDDLLVPTACSSEL 222
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 1e-06
Identities = 39/223 (17%), Positives = 66/223 (29%), Gaps = 21/223 (9%)
Query: 60 VLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP-DLNPVVED 116
LC+ HG S + L F +G A D G G SD
Sbjct: 49 FLCL-HGE-PSWSFLYRKMLPV--FTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRS 104
Query: 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLI-LNGAMCGISQKFKP 175
++F D+ + L + GG + L + + + D LI +N A+ K
Sbjct: 105 LLAFLDALQLE-----RVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKG 159
Query: 176 PWPLEHLLFTVAWLVP---TWRVVPTRGSLPMVSFKEEWKRKLALSSPR---RPVARPRA 229
+ L R +P + ++ + + R V
Sbjct: 160 FESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPD 219
Query: 230 ATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
E+ R + + + P + G D V P + L
Sbjct: 220 MEGAEIGR--QAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGML 260
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 30/238 (12%)
Query: 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV---VEDA 117
L V+HG G + V A L ++G D G G S L D V++
Sbjct: 57 LIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEF 116
Query: 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS------Q 171
+ + + +S GG + I +RQ L + + +
Sbjct: 117 HAVCTALGIE-----RYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAG 171
Query: 172 KFKPPWPLEHLLFTVAWLVPTWRVVPT----------RGSLPMVSFKEEWKRKLALSSPR 221
+ P E P R +V +++ +A
Sbjct: 172 DLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAE 231
Query: 222 RPVAR----PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
V P + L + R +V P+L+ G D P +
Sbjct: 232 PTVYHTMNGPNEFHVVGTLG-DWSVIDRLPDVTAPVLVIAGEHDEAT-PKTWQPFVDH 287
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 40/264 (15%), Positives = 74/264 (28%), Gaps = 41/264 (15%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFAT 89
+ Y T+S GLRL + + VLC+ G T + + + A A +
Sbjct: 5 YEDRYWTSSDGLRLHFRAYEGDISRPP--VLCL-PGLTRNARDF--EDLATRLAG-DWRV 58
Query: 90 CAIDHQGHGFSDGLVA----HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAI 145
+ +G G SD ++D + SLGG +
Sbjct: 59 LCPEMRGRGDSDYAKDPMTYQPMQY---LQDLEALLAQEGIE-----RFVAIGTSLGGLL 110
Query: 146 ALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV--PTW-----RVVPT 198
+ + +LN + P LE + V TW + +
Sbjct: 111 TMLLAAANPARIAAAVLNDVGPEV-----SPEGLERIRGYVGQGRNFETWMHAARALQES 165
Query: 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE-------- 250
G + +W R R +++ G +V+
Sbjct: 166 SGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDAL 225
Query: 251 --VPMLICHGGDDVVCDPACVEEL 272
P+L+ G + ++
Sbjct: 226 ATRPLLVLRGETSDILSAQTAAKM 249
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} Length = 377 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 2e-06
Identities = 34/275 (12%), Positives = 65/275 (23%), Gaps = 47/275 (17%)
Query: 49 WTPLPPAKTLGVLCVVHGFTG--------ESSWIVQLTAVLFAKSGFATCAIDHQGHGFS 100
P+ P +G++ HG + A +G+ T D+ G G +
Sbjct: 65 AMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDN 124
Query: 101 DGLVAHIPDLNPVVEDAISFFDSFRARHA--------PDLPAFLYSESLGGAIALYITLR 152
+ P + A S D A +L S GG + +
Sbjct: 125 EL--TLHPYVQAETL-ASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEM 181
Query: 153 QKGAWDGLILNGAMCG-------ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMV 205
+ L ++ G + F P +A+ + + + S
Sbjct: 182 LAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDE 241
Query: 206 SFKEEWKRKLALSSPRR---------------------PVARPRAATALELLRVSRDLQG 244
F + + + T + +
Sbjct: 242 IFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNH 301
Query: 245 RFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279
+ P+L+ D A E Y
Sbjct: 302 YDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKY 336
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 35/270 (12%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAID 93
+T S G +F + W P + V HG+ + W Q+ F G+ A D
Sbjct: 2 TVTTSDGTNIFYKDWGP-RDGLPV-VF--HHGWPLSADDWDNQMLF--FLSHGYRVIAHD 55
Query: 94 HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153
+GHG SD + D++ D + ++ R A + + GG +A Y+ +
Sbjct: 56 RRGHGRSDQ-PSTGHDMDTYAADVAALTEALDLRGA----VHIGHSTGGGEVARYVARAE 110
Query: 154 KGAWDGLIL---------------NGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPT 198
G +L +G + +F+ F + +
Sbjct: 111 PGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNR 170
Query: 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258
G+ + W + + + A + D + ++VP+L+ HG
Sbjct: 171 EGATVSQGLIDHWWLQGMMGAANAHYECIAAFSET-------DFTDDLKRIDVPVLVAHG 223
Query: 259 GDDVVCDPACVEELYKRAASKDKTLSIYPG 288
DD V A + TL Y G
Sbjct: 224 TDDQVVPYADAAPKSAELL-ANATLKSYEG 252
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 27/217 (12%), Positives = 54/217 (24%), Gaps = 21/217 (9%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+HG S+ W + ++ + T A+D G + FD
Sbjct: 73 LHGALFSSTMWYPNIAD--WSSK-YRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFD 129
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
+ + + SLGG + LR + ++ F P
Sbjct: 130 NLGIEKS----HMI-GLSLGGLHTMNFLLRMPERVKSAAILSP----AETFLPFHHDF-- 178
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR---VS 239
+ + L + + + + + V +
Sbjct: 179 ---YKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPY 235
Query: 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA 276
VP+L+ G +V+ DP
Sbjct: 236 VFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSF 272
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 5e-06
Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 55/240 (22%)
Query: 94 HQGH-GFSDGLVAH-IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES----------- 140
H H F G + D+ V EDA F D+F + D+P + S+
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDA--FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 141 LGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT-VAWLVPTWRVVPTR 199
+ G + L+ TL K + QKF +E +L +L+ + +
Sbjct: 61 VSGTLRLFWTLLSKQE-----------EMVQKF-----VEEVLRINYKFLMSPIKTEQRQ 104
Query: 200 GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG- 258
S+ + E+ R + R L+L + +L+ ++ G
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR------PAKNVLIDGV 158
Query: 259 ---GDDV----VCDPACVEELY---------KRAASKDKTLSIYPGMWHQLIGEPEENVE 302
G VC V+ K S + L + + +Q+ +
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 7e-06
Identities = 38/253 (15%), Positives = 68/253 (26%), Gaps = 21/253 (8%)
Query: 16 GSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGF-TGESSWI 74
S+T + R S++ ++ + N+ ++T P + G ++
Sbjct: 5 ASMTGGQQMGRGSMAALNKEMVNTLLGPIYTCHREGNPC------FVFLSGAGFFSTADN 58
Query: 75 VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134
ID G+S L V + F+ F+ +
Sbjct: 59 FANIIDKLPD-SIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQ-----SY 112
Query: 135 FLYSESLGGAIALYITLRQKGAWDGLIL------NGAMCGISQKFKPPWPLEHLLFTVAW 188
L S+GG AL I + A G I G S P L A
Sbjct: 113 LLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAA 172
Query: 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE 248
+ +R FK+ W+ V L + +
Sbjct: 173 DRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKI--RLALGEEDFKTGIS 230
Query: 249 VEVPMLICHGGDD 261
++P ++
Sbjct: 231 EKIPSIVFSESFR 243
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-05
Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 8/105 (7%)
Query: 59 GVLCVVHGFT-GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117
G + HGF G + V A + + G+ D + + D+ ++
Sbjct: 5 GHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRD-LGQLGDVRGRLQRL 63
Query: 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLIL 162
+ P L SLG IA ++L+ L L
Sbjct: 64 LEIAR----AATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFL 102
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 1e-05
Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 20/233 (8%)
Query: 60 VLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
+L + HG + SW V A + ++ A+D + HG + + +D
Sbjct: 41 LLLL-HGGGHSALSWAVFTAA-IISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVG 98
Query: 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK-GAWDGLIL---------NGAMCG 168
+ ++ P P L S+GGAIA++ + GL + +
Sbjct: 99 NVVEAMYGDLPP--PIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSM 156
Query: 169 ISQKFKPPWPLEHLLFTVAWLVPTWRV---VPTRGSLPMVSFKEEWKRKLALSSPRRPVA 225
+ P + L + W V + ++ R S+ + E S P
Sbjct: 157 QNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYT 216
Query: 226 RPRAATALE--LLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA 276
E R L F +P L+ G D + + ++ +
Sbjct: 217 WRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKF 269
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 34/241 (14%), Positives = 60/241 (24%), Gaps = 30/241 (12%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSD---GLVAHIPDLNPVVEDAIS 119
HGF + + W L K F D+ G G SD L +D
Sbjct: 34 AHGFGCDQNMWRFMLPE--LEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEE 90
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP- 178
+ + + S+ IA + + + P +
Sbjct: 91 ILVALDLVNV-SIIGH----SVSSIIAGIASTHVGDRISDITMICPSPCFMNF-PPDYVG 144
Query: 179 ------LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATA 232
LE L+ + W P+V + A
Sbjct: 145 GFERDDLEELINLMDKNYIGWA----NYLAPLVMGASH--SSELIGELSGSFCTTDPIVA 198
Query: 233 LELLRVSR--DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290
+ + D + E++ P LI D + P + + + L +
Sbjct: 199 KTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYM--AENIPNSQLELIQAEG 256
Query: 291 H 291
H
Sbjct: 257 H 257
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 42/225 (18%), Positives = 68/225 (30%), Gaps = 24/225 (10%)
Query: 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV---VEDAIS 119
V+HG G ++++++ + + GF D +G G S L P L V VED +
Sbjct: 30 VLHGGPGGNAYVLREGLQDYLE-GFRVVYFDQRGSGRSLEL-PQDPRLFTVDALVEDTLL 87
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG---------IS 170
++ L + G +AL + R A ++L + +
Sbjct: 88 LAEALGVERF-----GLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAA 142
Query: 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAA 230
P P E+L + P P EW + A
Sbjct: 143 GLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLR 202
Query: 231 TALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275
L L D P+ + G D EE+ R
Sbjct: 203 NGLWRL----DYTPYLTPERRPLYVLVGERDGTS-YPYAEEVASR 242
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 36/225 (16%)
Query: 60 VLCVVHGF-TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVVED 116
+ + + T S W Q+ A+ F D +GHG S+ I L D
Sbjct: 28 WIVLSNSLGTDLSMWAPQVAAL---SKHFRVLRYDTRGHGHSEAPKGPYTIEQL---TGD 81
Query: 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP 176
+ D+ + A S+GG + + R + + L C + + P
Sbjct: 82 VLGLMDTLKIA-----RANFCGLSMGGLTGVALAARHADRIERVAL----CNTAARIGSP 132
Query: 177 WPLEHLLFTVAW---------LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARP 227
++P W P+V + +
Sbjct: 133 EVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVV--LAMIRDVFVHTDKEG----- 185
Query: 228 RAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
A+ E + + DL+ ++VP L+ G D+ PA EL
Sbjct: 186 -YASNCEAID-AADLRPEAPGIKVPALVISGTHDLAATPAQGREL 228
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 4e-05
Identities = 36/244 (14%), Positives = 57/244 (23%), Gaps = 37/244 (15%)
Query: 91 AIDHQGHGFSDGLVAHIPDLNPV----VEDAISFFDSFRA-RHAPDLPAFLYSESLGGAI 145
ID HG S N D + + + S+GG
Sbjct: 91 LIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQ 150
Query: 146 ALYITLRQKGAWDGLIL------NGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR-VVPT 198
AL + Q + LIL G + PP + L
Sbjct: 151 ALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFAN 210
Query: 199 RG----SLPMVSFKEEW-------------KRKLALSSPRRPV-----ARPRAATALELL 236
+ SF + PV + +
Sbjct: 211 ESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQ 270
Query: 237 RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE 296
+ L + V + G C P L + ++ L + PG H + E
Sbjct: 271 TFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFL--QKTLQNYHLDVIPGGSHLVNVE 328
Query: 297 -PEE 299
P+
Sbjct: 329 APDL 332
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 38/221 (17%), Positives = 70/221 (31%), Gaps = 38/221 (17%)
Query: 60 VLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
++ +VHG G + W L+ A++ A +D GHG + + VE
Sbjct: 18 LVVLVHGLLGSGADWQPVLSH--LARTQCAALTLDLPGHGTNPERHCD--NFAEAVEMIE 73
Query: 119 SFFDSFRARHAPDLPAFL--YSESLGGAIALYITLRQKGAWD---GLILNGAMCGISQKF 173
A ++P L YS LGG + ++ + + G I+ G G+ +
Sbjct: 74 QTVQ---AHVTSEVPVILVGYS--LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENE 128
Query: 174 KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATAL 233
+ +H P+ +W ++ SS + A
Sbjct: 129 EKAARWQHDQQWAQRF----------SQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRS 178
Query: 234 ELLRVS-------------RDLQGRFEEVEVPMLICHGGDD 261
L S L + +++P+ G D
Sbjct: 179 ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQD 219
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 6e-05
Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 5/119 (4%)
Query: 54 PAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA---HIPD 109
P G++ HG S + A + ++G AT ID + + D
Sbjct: 31 PNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFD 90
Query: 110 LNPVVEDAISFFDSFRARH-APDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167
+ + + D L + S GG AL + ++ G
Sbjct: 91 IGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRP 149
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* Length = 462 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 6e-05
Identities = 38/254 (14%), Positives = 65/254 (25%), Gaps = 49/254 (19%)
Query: 76 QLTAVLFAKSGFATCAIDHQG--HGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA---- 129
+ + G+ + DH+G F G E+ ++ D RA
Sbjct: 145 PIIIGWALQQGYYVVSSDHEGFKAAFIAG-----------YEEGMAILDGIRALKNYQNL 193
Query: 130 -PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA----------------------- 165
D L S G ++ T + L + GA
Sbjct: 194 PSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAG 253
Query: 166 -----MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSP 220
+ G+S ++ LP V + +L +
Sbjct: 254 FALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSLVND 313
Query: 221 RRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASK 279
+ A+ L+ V + V + P I H D + K +K
Sbjct: 314 TNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAK 373
Query: 280 --DKTLSIYPGMWH 291
+ S YP H
Sbjct: 374 GANINFSPYPIAEH 387
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 7e-05
Identities = 44/305 (14%), Positives = 81/305 (26%), Gaps = 59/305 (19%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
E + L P ++ A + Y + R+ + P + HG
Sbjct: 33 EELAKVQAEPDLQPVDYPADGVKVYRLTY-KSFGNARITGWYAVP-DKEGPHPAIVKYHG 90
Query: 67 FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG------------LVAHIPDLN--- 111
+ S V +A G+AT + +G S+ + I D +
Sbjct: 91 Y-NASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYY 149
Query: 112 --PVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168
V DA+ + + D + S GG + + + +
Sbjct: 150 YRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSN 209
Query: 169 ISQKFK--PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVAR 226
+ P + +R + + + + L+ R
Sbjct: 210 FERAIDVALEQPYL-------EINSFFRRNGSPETE------VQAMKTLSYFDIMNLADR 256
Query: 227 PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286
V+VP+L+ G D V P+ V Y K L +Y
Sbjct: 257 ----------------------VKVPVLMSIGLIDKVTPPSTVFAAY-NHLETKKELKVY 293
Query: 287 PGMWH 291
H
Sbjct: 294 RYFGH 298
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 9e-05
Identities = 33/259 (12%), Positives = 68/259 (26%), Gaps = 24/259 (9%)
Query: 55 AKTLGVLCVVHG--FTGESSWIVQLTAVLFAKSGFATCAIDH---QGHGFSDGLVAHIPD 109
T GV+ +HG + + + + + + +
Sbjct: 26 QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCII------ 79
Query: 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169
ED + FD + P F + S G ++L I + G+I G
Sbjct: 80 -----EDVYASFD-AIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID--GVID---FYGY 128
Query: 170 SQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRA 229
S+ P+ + + ++ S V + +R L R
Sbjct: 129 SRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINM 188
Query: 230 ATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGM 289
+ ++ + P+ I H D E + T
Sbjct: 189 INIADYTDSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHI--MNHVPHSTFERVNKN 246
Query: 290 WHQLIGEPEENVELVFGEM 308
H P + ++ ++
Sbjct: 247 EHDFDRRPNDEAITIYRKV 265
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 36/228 (15%), Positives = 59/228 (25%), Gaps = 27/228 (11%)
Query: 64 VHG-FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VHG G SW L +G A+D G + + L + +
Sbjct: 10 VHGACHGGWSW--YKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELME 67
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC--------GISQKFK 174
S A L SLGG + + A + +++
Sbjct: 68 SLSADE----KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYN 123
Query: 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA------RPR 228
P E+ L T + T + KL +A RP
Sbjct: 124 ERTPAENWLDTQFLPYGSPEEPLTSMFFG----PKFLAHKLYQLCSPEDLALASSLVRPS 179
Query: 229 AATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA 276
+ +L + RF V+ ++C +D
Sbjct: 180 SLFMEDLSKAKYFTDERFGSVKRVYIVC--TEDKGIPEEFQRWQIDNI 225
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A Length = 397 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 2e-04
Identities = 35/284 (12%), Positives = 63/284 (22%), Gaps = 60/284 (21%)
Query: 53 PPAKTLGVLCVVHGFTG----------ESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG 102
+ +L H + A G+ D+ G G S+
Sbjct: 74 RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNY 133
Query: 103 LVAHIPDLNPVVEDAISFFDSFRARHA--------PDLPAFLYSESLGGAIAL-YITLRQ 153
A+ P L+ E A + D+ RA + L S GG A+ +
Sbjct: 134 --AYHPYLHSASE-ASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIE 190
Query: 154 KGAWDGLILNGAMCG-------------ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200
L + S +L +V
Sbjct: 191 AHLSKEFHLVASAPISGPYALEQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIY 250
Query: 201 SLPMVSFKEEWKRKLALSSPRRP-------------------------VARPRAATALEL 235
P F++ W K+ P + + + A
Sbjct: 251 LEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSIDKVKSYFQPGFYSDFPSNPANPF 310
Query: 236 LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279
+ + P L+C +D + +
Sbjct: 311 RQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQR 354
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 38/243 (15%), Positives = 74/243 (30%), Gaps = 34/243 (13%)
Query: 64 VHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSD---GLVAHIPDLNPVVEDAIS 119
GF + S W A F + D+ G G SD + L+ +D +
Sbjct: 26 APGFGCDQSVWNAVAPA--FEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLD 82
Query: 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLIL-NGAMCGISQKFKPPWP 178
++ + S+G I + ++R+ + L++ + C ++ +
Sbjct: 83 VCEALDLKET-VFVGH----SVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGG 137
Query: 179 LEHLLFT----------VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPR 228
E + W V + P + EE + + + P
Sbjct: 138 FEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIK--EELESRFCSTDPV------I 189
Query: 229 AATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
A + S D + +V VP LI DD++ + + +L
Sbjct: 190 ARQFAKAAFFS-DHREDLSKVTVPSLILQCADDIIAPATVGKYM--HQHLPYSSLKQMEA 246
Query: 289 MWH 291
H
Sbjct: 247 RGH 249
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 3e-04
Identities = 20/105 (19%), Positives = 29/105 (27%), Gaps = 7/105 (6%)
Query: 64 VHG-FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VH F G W L SG A+D G + IP+ + + + F
Sbjct: 18 VHAAFHGAWCW--YKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMA 75
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167
S A L +LGG + +
Sbjct: 76 SLPANE----KIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 5e-04
Identities = 39/226 (17%), Positives = 64/226 (28%), Gaps = 37/226 (16%)
Query: 60 VLCVVHGF-TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVVED 116
+L + + T W QL A + F D +GHG S + L ED
Sbjct: 29 LLALSNSIGTTLHMWDAQLPA--LTR-HFRVLRYDARGHGASSVPPGPYTLARL---GED 82
Query: 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP 176
+ D+ R A SLGG + ++ L + L+L +
Sbjct: 83 VLELLDALEVR-----RAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP----- 132
Query: 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVS------FKEEWKRKL--ALSSPRRPVARPR 228
W V+ + F + + R +
Sbjct: 133 --------AAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATN 184
Query: 229 AATALELLRVSR--DLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
R DL+ + +E P L+ G D V + E +
Sbjct: 185 RHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELI 230
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 39.9 bits (92), Expect = 5e-04
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 10/150 (6%)
Query: 48 WWTPLPPAKTLGVLCVVHGFTGE----SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL 103
+ P K+ + ++H ++ IV LF K GF T + + G S G
Sbjct: 38 RYQP-SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQG- 95
Query: 104 VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163
+ DA S D ++ H ++ S G I + + +R+ + +
Sbjct: 96 --EFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIA 153
Query: 164 GAMCGISQKFKPPWPLEHLLFTVA--WLVP 191
F P P L+ + P
Sbjct: 154 PQPNTYDFSFLAPCPSSGLIINGDADKVAP 183
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 39.5 bits (91), Expect = 7e-04
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288
DL +V P+ DD + EL+ + +K KTL + PG
Sbjct: 186 NGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG 236
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.98 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.98 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.98 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.98 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.98 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.98 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.98 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.97 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.97 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.96 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.96 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.96 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.96 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.96 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.95 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.95 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.95 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.95 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.95 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.95 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.95 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.95 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.95 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.94 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.94 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.94 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.94 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.94 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.94 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.94 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.93 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.93 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.93 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.93 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.93 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.93 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.93 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.93 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.92 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.92 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.92 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.92 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.92 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.92 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.92 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.92 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.92 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.92 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.92 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.91 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.91 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.91 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.91 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.91 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.91 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.91 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.9 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.9 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.9 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.9 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.9 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.89 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.89 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.89 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.89 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.89 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.89 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.89 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.89 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.89 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.88 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.88 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.88 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.87 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.87 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.87 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.86 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.86 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.86 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.85 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.85 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.85 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.84 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.84 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.84 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.84 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.84 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.83 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.83 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.83 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.82 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.81 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.81 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.8 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.8 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.8 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.77 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.77 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.76 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.76 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.75 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.75 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.73 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.72 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.71 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.71 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.7 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.69 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.69 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.68 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.67 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.65 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.65 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.64 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.56 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.54 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.45 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.4 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.27 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.23 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.22 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.19 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.16 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 99.01 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.99 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.98 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.97 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.96 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.96 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.89 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.84 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.82 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.82 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.74 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.72 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.68 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.65 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.65 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.64 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.62 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.55 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.52 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.47 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.28 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 98.28 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.21 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.18 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.99 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.93 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.82 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.71 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 97.4 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 97.36 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 97.31 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.3 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 97.24 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 97.24 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.24 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 97.15 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.98 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.97 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.85 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.57 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.56 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.44 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.7 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 93.67 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 92.81 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.83 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 91.5 |
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=243.77 Aligned_cols=269 Identities=25% Similarity=0.376 Sum_probs=206.2
Q ss_pred ccccccce-eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 27 HSVSHSSE-YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 27 ~~~~~~~~-~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
.++++++. .+.+.||.+|.|..+.+.+ .++|+|||+||++++.. .|..+++.|.++||+|+++|+||+|.|.....
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 106 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTG--TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERM 106 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSS--CCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCC--CCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC
Confidence 35667776 8899999999999998764 35889999999998887 67899999999899999999999999998665
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
...++.++++|+.++++.+.... +..+++++|||+||.+++.++.++|++|+++|++++......... ..........
T Consensus 107 ~~~~~~~~~~d~~~~l~~l~~~~-~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~ 184 (342)
T 3hju_A 107 VVSDFHVFVRDVLQHVDSMQKDY-PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA-TTFKVLAAKV 184 (342)
T ss_dssp CCSCTHHHHHHHHHHHHHHHHHS-TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTT-SHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHhC-CCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhh-hHHHHHHHHH
Confidence 55688999999999999998874 566999999999999999999999999999999999766543221 1112222222
Q ss_pred hhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 186 VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
.....+....... ..............+..+.....................+..+.+.++++|+++++|++|.+++
T Consensus 185 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~ 261 (342)
T 3hju_A 185 LNLVLPNLSLGPI---DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 261 (342)
T ss_dssp HHHHCTTCBCCCC---CGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSC
T ss_pred HHHhccccccCcc---cccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccC
Confidence 3333333222111 1122233444445555555555555556666666666667777889999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
++.++.+.+.++++++++++++++||+++ ++|+++.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 300 (342)
T 3hju_A 262 SKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSV 300 (342)
T ss_dssp HHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHH
T ss_pred hHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHH
Confidence 99999999999655799999999999999 888765554
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=252.68 Aligned_cols=254 Identities=16% Similarity=0.135 Sum_probs=173.2
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP 112 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 112 (308)
..++.+.||.+|+|..+++.+ +|+|||+||++++.. .|+.+.+.|++ +|+|+++|+||||.|+.+... +++++
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~~----~p~lvl~hG~~~~~~-~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~ 78 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAAE----KPLLALSNSIGTTLH-MWDAQLPALTR-HFRVLRYDARGHGASSVPPGP-YTLAR 78 (266)
T ss_dssp CEEEECTTSCEEEEEEESCTT----SCEEEEECCTTCCGG-GGGGGHHHHHT-TCEEEEECCTTSTTSCCCCSC-CCHHH
T ss_pred ceEEeccCCcEEEEEecCCCC----CCEEEEeCCCccCHH-HHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCCC-CCHHH
Confidence 457788999999999987632 678999999998877 67889999986 599999999999999876554 68999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh-hhCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA-WLVP 191 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (308)
+++|+.++++.++.+ +++++||||||.+|+.+|.++|++|+++|++++....... ..+......... ....
T Consensus 79 ~a~dl~~~l~~l~~~-----~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 79 LGEDVLELLDALEVR-----RAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPA---AQWDERIAAVLQAEDMS 150 (266)
T ss_dssp HHHHHHHHHHHTTCS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCS---HHHHHHHHHHHHCSSSH
T ss_pred HHHHHHHHHHHhCCC-----ceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCch---hHHHHHHHHHHccccHH
Confidence 999999999999876 9999999999999999999999999999999986543211 001110100000 0000
Q ss_pred CcccccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 192 TWRVVPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
..........+..... ..+.....+...... . ............ .+..+.+.++++|+|+|+|++|.+++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~ 226 (266)
T 3om8_A 151 ETAAGFLGNWFPPALLERAEPVVERFRAMLMA-T---NRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASH 226 (266)
T ss_dssp HHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHT-S---CHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHH
T ss_pred HHHHHHHHHhcChhhhhcChHHHHHHHHHHHh-C---CHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHH
Confidence 0000000000000000 000000000000000 0 000011111111 23345678899999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 269 VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++.+.+.+ +++++++++ +||+++ ++|+++++.|.+++
T Consensus 227 ~~~l~~~i--p~a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl 264 (266)
T 3om8_A 227 GELIAASI--AGARLVTLP-AVHLSNVEFPQAFEGAVLSFL 264 (266)
T ss_dssp HHHHHHHS--TTCEEEEES-CCSCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHhC--CCCEEEEeC-CCCCccccCHHHHHHHHHHHh
Confidence 99999999 789999998 899999 99999999988764
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=240.04 Aligned_cols=268 Identities=25% Similarity=0.368 Sum_probs=199.8
Q ss_pred cccccce-eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 28 SVSHSSE-YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 28 ~~~~~~~-~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
++++++. .+.+.+|.+|+|..+++.+ .++|+||++||++++.. .|..+++.|.++||+|+++|+||+|.|......
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 89 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTG--TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMV 89 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSS--CCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTC
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCC--CCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCC
Confidence 4455555 8889999999999998764 35889999999998887 678999999999999999999999999976655
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..+++++++|+.++++.+.... +..+++++|||+||.+++.++.++|++|+++|++++.......... ..........
T Consensus 90 ~~~~~~~~~d~~~~l~~l~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~ 167 (303)
T 3pe6_A 90 VSDFHVFVRDVLQHVDSMQKDY-PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESAT-TFKVLAAKVL 167 (303)
T ss_dssp CSSTHHHHHHHHHHHHHHHHHS-TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHH-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhcc-CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccH-HHHHHHHHHH
Confidence 5688999999999999998874 5569999999999999999999999999999999987543321100 0011111122
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
....+...... ...............+..+.....................+....+.++++|+++++|++|.+++.
T Consensus 168 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 244 (303)
T 3pe6_A 168 NSVLPNLSSGP---IDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244 (303)
T ss_dssp HTTCCSCCCCC---CCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCH
T ss_pred HHhcccccCCc---cchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCCh
Confidence 22222221111 111122233444445555555555555555555666555666777889999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
+.++.+.+.++.+++++++++++||+++ ++|+++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 282 (303)
T 3pe6_A 245 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSV 282 (303)
T ss_dssp HHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHH
T ss_pred HHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHH
Confidence 9999999998655789999999999999 888755544
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=246.06 Aligned_cols=261 Identities=14% Similarity=0.075 Sum_probs=170.3
Q ss_pred cceeEEcCCC----cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-c
Q 035721 32 SSEYITNSRG----LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-H 106 (308)
Q Consensus 32 ~~~~~~~~~g----~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~ 106 (308)
+..++ +.+| .+++|...++.+. +|+|||+||++++.. .|+.+++.|+++||+|+++|+||||.|+.+.. .
T Consensus 21 ~~~~~-~~~g~~~g~~l~y~~~G~~~~---g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~ 95 (310)
T 1b6g_A 21 SPNYL-DDLPGYPGLRAHYLDEGNSDA---EDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEE 95 (310)
T ss_dssp CCEEE-ESCTTCTTCEEEEEEEECTTC---SCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGG
T ss_pred CceEE-EecCCccceEEEEEEeCCCCC---CCEEEEECCCCCchh-hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcC
Confidence 33344 4566 8999999886431 468999999998877 77889999998899999999999999987642 3
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC---------CCCc
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF---------KPPW 177 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~---------~~~~ 177 (308)
.++++.+++|+.++++.++.+ +++|+||||||.+|+.+|.++|++|+++|++++........ ....
T Consensus 96 ~y~~~~~a~dl~~ll~~l~~~-----~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T 1b6g_A 96 DYTFEFHRNFLLALIERLDLR-----NITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp GCCHHHHHHHHHHHHHHHTCC-----SEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred CcCHHHHHHHHHHHHHHcCCC-----CEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccch
Confidence 479999999999999999876 99999999999999999999999999999999854211100 0000
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH--------HHHHHhhhhcC-C
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL--------RVSRDLQGRFE-E 248 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~ 248 (308)
........... .+............ ..+. ......+.................... ....+..+.+. +
T Consensus 171 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 247 (310)
T 1b6g_A 171 GFTAWKYDLVT-PSDLRLDQFMKRWA-PTLT-EAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQND 247 (310)
T ss_dssp THHHHHHHHHS-CSSCCHHHHHHHHS-TTCC-HHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcc-CchhhhhhHHhhcC-CCCC-HHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhcc
Confidence 00011111000 00000000000000 0011 111111111110000000111111110 01123345677 8
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEe--cCCcccccCCchhhHHHhhhcC
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY--PGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~i~~~i 308 (308)
+++|+|+|+|++|.+++ +..+.+.+.+ ++++++++ +++||+++.+|+++++.|.+++
T Consensus 248 i~~P~Lvi~G~~D~~~~-~~~~~~~~~i--p~~~~~~i~~~~~GH~~~~~p~~~~~~i~~Fl 306 (310)
T 1b6g_A 248 WNGQTFMAIGMKDKLLG-PDVMYPMKAL--INGCPEPLEIADAGHFVQEFGEQVAREALKHF 306 (310)
T ss_dssp CCSEEEEEEETTCSSSS-HHHHHHHHHH--STTCCCCEEETTCCSCGGGGHHHHHHHHHHHH
T ss_pred ccCceEEEeccCcchhh-hHHHHHHHhc--ccccceeeecCCcccchhhChHHHHHHHHHHH
Confidence 99999999999999999 8889999988 57777777 9999998878899998887763
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=241.80 Aligned_cols=256 Identities=16% Similarity=0.103 Sum_probs=165.8
Q ss_pred EEcCCC----cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 36 ITNSRG----LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 36 ~~~~~g----~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
+.+.+| .+++|..+++.+. +++|||+||++++.. .|+.+++.|+++||+|+++|+||||.|+.+.. ..+++
T Consensus 23 ~~~~~g~~~g~~l~y~~~G~~~~---g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~ 98 (297)
T 2xt0_A 23 YLEGLPGFEGLRMHYVDEGPRDA---EHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTF 98 (297)
T ss_dssp EECCCTTCTTCCEEEEEESCTTC---SCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCH
T ss_pred EEeccCCCCceEEEEEEccCCCC---CCeEEEECCCCCcce-eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCH
Confidence 345566 8999999875331 568999999998876 67889999998899999999999999987643 34799
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
+++++|+.++++.++.+ +++|+||||||.+|+.+|.++|++|+++|++++.... ................ ..
T Consensus 99 ~~~a~dl~~ll~~l~~~-----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~--~~~~~~~~~~~~~~~~-~~ 170 (297)
T 2xt0_A 99 GFHRRSLLAFLDALQLE-----RVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAV--GLSPGKGFESWRDFVA-NS 170 (297)
T ss_dssp HHHHHHHHHHHHHHTCC-----SEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCS--SSCSCHHHHHHHHHHH-TC
T ss_pred HHHHHHHHHHHHHhCCC-----CEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCc--ccCCchhHHHHHHHhh-cc
Confidence 99999999999999876 9999999999999999999999999999999985411 1110100111111100 00
Q ss_pred CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH---------HHHHHHHhhhhcC-CCCcceEEEeeCC
Q 035721 191 PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE---------LLRVSRDLQGRFE-EVEVPMLICHGGD 260 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~i~~P~l~i~g~~ 260 (308)
+............ ..... .....+.................. ......+..+.+. ++++|+|+|+|++
T Consensus 171 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~ 248 (297)
T 2xt0_A 171 PDLDVGKLMQRAI-PGITD-AEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQ 248 (297)
T ss_dssp TTCCHHHHHHHHS-TTCCH-HHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETT
T ss_pred cccchhHHHhccC-ccCCH-HHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCC
Confidence 0000000000000 00000 011111110000000000000000 0001123334566 8999999999999
Q ss_pred CcccChHHHHHHHHHhcCCCCcEE--EecCCcccccCCchhhHHHhhhcC
Q 035721 261 DVVCDPACVEELYKRAASKDKTLS--IYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
|.+++ +..+.+.+.+ ++++++ .++++||+++.+|+++++.|.+++
T Consensus 249 D~~~~-~~~~~~~~~~--p~~~~~~~~~~~~GH~~~~~p~~~~~~i~~fl 295 (297)
T 2xt0_A 249 DPVLG-PEVMGMLRQA--IRGCPEPMIVEAGGHFVQEHGEPIARAALAAF 295 (297)
T ss_dssp CSSSS-HHHHHHHHHH--STTCCCCEEETTCCSSGGGGCHHHHHHHHHHT
T ss_pred CcccC-hHHHHHHHhC--CCCeeEEeccCCCCcCcccCHHHHHHHHHHHH
Confidence 99998 8888899888 455554 478999998888999999988764
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=233.50 Aligned_cols=256 Identities=17% Similarity=0.187 Sum_probs=167.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++.+.+|.+|+|..+++.+ .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .+++++++
T Consensus 3 ~~~~~~g~~l~y~~~g~~~----~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 76 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGPRD----APVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWD-GHDMDHYA 76 (276)
T ss_dssp EEECTTSCEEEEEEESCTT----SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHH
T ss_pred eEECCCCcEEEEEecCCCC----CCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CCCHHHHH
Confidence 4667899999999987643 468999999998877 67889999999999999999999999986543 36899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhhh---
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVAW--- 188 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 188 (308)
+|+.+++++++.+ +++++||||||.+|+.++.++ |++|+++|++++........ ............+..
T Consensus 77 ~d~~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T 1zoi_A 77 DDVAAVVAHLGIQ-----GAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVA 151 (276)
T ss_dssp HHHHHHHHHHTCT-----TCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-----ceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHH
Confidence 9999999998776 999999999999999988887 99999999999754321110 000000000000000
Q ss_pred -----hCCCcccccC-CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCC
Q 035721 189 -----LVPTWRVVPT-RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 189 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~ 260 (308)
.......... ...................... .............. .+..+.+.++++|+++++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~ 226 (276)
T 1zoi_A 152 SNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM-----IGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDD 226 (276)
T ss_dssp HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETT
T ss_pred HhHHHHHHHhhhccccccccccccccHHHHHHHHhhhh-----hhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCC
Confidence 0000000000 0000000001111000000000 00011111111111 122345678899999999999
Q ss_pred CcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 261 DVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 261 D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|.++|++ ..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 227 D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 274 (276)
T 1zoi_A 227 DQIVPYENSGVLSAKLL--PNGALKTYKGYPHGMPTTHADVINADLLAFI 274 (276)
T ss_dssp CSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHhhC--CCceEEEcCCCCCchhhhCHHHHHHHHHHHh
Confidence 9999987 445566666 6899999999999999 99999999988764
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=234.32 Aligned_cols=226 Identities=19% Similarity=0.193 Sum_probs=161.2
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
++.|||+||++++.. .|+.+++.|+++||+|+++|+||||.|+..... ++++++++|+.++++++... ..+++|+
T Consensus 51 ~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~-~~~~~~~~d~~~~~~~l~~~---~~~v~lv 125 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAA-STASDWTADIVAAMRWLEER---CDVLFMT 125 (281)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHT-CCHHHHHHHHHHHHHHHHHH---CSEEEEE
T ss_pred CceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCccccC-CCHHHHHHHHHHHHHHHHhC---CCeEEEE
Confidence 567999999998887 568999999999999999999999999764443 58889999999999998754 3489999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
||||||.+|+.+|.++|++|+++|++++....... ....... ............. ........
T Consensus 126 G~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~--------- 188 (281)
T 4fbl_A 126 GLSMGGALTVWAAGQFPERFAGIMPINAALRMESP------DLAALAF-NPDAPAELPGIGS-DIKAEGVK--------- 188 (281)
T ss_dssp EETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCH------HHHHHHT-CTTCCSEEECCCC-CCSSTTCC---------
T ss_pred EECcchHHHHHHHHhCchhhhhhhcccchhcccch------hhHHHHH-hHhhHHhhhcchh-hhhhHHHH---------
Confidence 99999999999999999999999999986543211 1111110 0000000000000 00000000
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C-
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G- 295 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~- 295 (308)
..............+..........+.++++|+|+++|++|.++|++.++.+++.++++++++++++++||.++ +
T Consensus 189 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~ 265 (281)
T 4fbl_A 189 ---ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDN 265 (281)
T ss_dssp ---CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGST
T ss_pred ---HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCcccc
Confidence 00001111222223333334445668899999999999999999999999999999766789999999999988 5
Q ss_pred CchhhHHHhhhcC
Q 035721 296 EPEENVELVFGEM 308 (308)
Q Consensus 296 ~~~~~~~~i~~~i 308 (308)
+++++.+.|.+||
T Consensus 266 ~~e~v~~~i~~FL 278 (281)
T 4fbl_A 266 DKELILERSLAFI 278 (281)
T ss_dssp THHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 5888888888764
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=245.46 Aligned_cols=250 Identities=14% Similarity=0.120 Sum_probs=165.1
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
.|+|..+++.. ..+|+|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.+....++++++++|+.++++
T Consensus 2 ~i~y~~~g~~~--~~~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~ 77 (268)
T 3v48_A 2 HMKLSLSPPPY--ADAPVVVLISGLGGSGS-YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALV 77 (268)
T ss_dssp CSCCEECCCSS--TTCCEEEEECCTTCCGG-GGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHH
T ss_pred ceEEEecCCCC--CCCCEEEEeCCCCccHH-HHHHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 35677776543 34789999999999887 77889999976 5999999999999998765445799999999999999
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh-CCCcccccCCCC
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL-VPTWRVVPTRGS 201 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 201 (308)
.++.+ +++++||||||.+|+.+|.++|++|+++|++++......... ............. ...+........
T Consensus 78 ~l~~~-----~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (268)
T 3v48_A 78 AAGIE-----HYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTR--RCFQVRERLLYSGGAQAWVEAQPLFL 150 (268)
T ss_dssp HTTCC-----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCC-----CeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhh--HHHHHHHHHHhccchhhhhhhhhhhc
Confidence 88766 999999999999999999999999999999998643221100 0000000000000 000000000000
Q ss_pred CCCcccc-c-HHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 202 LPMVSFK-E-EWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 202 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
....... . ............... ............ .+....+.++++|+++|+|++|.++|++.++.+.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~- 226 (268)
T 3v48_A 151 YPADWMAARAPRLEAEDALALAHFQ---GKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL- 226 (268)
T ss_dssp SCHHHHHTTHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHC-
T ss_pred CchhhhhcccccchhhHHHHHhhcC---chhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhC-
Confidence 0000000 0 000000000000000 011111111111 2334567889999999999999999999999999998
Q ss_pred CCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 278 SKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 278 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++++++++||+++ ++|+++++.|.+++
T Consensus 227 -p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl 257 (268)
T 3v48_A 227 -PDSQKMVMPYGGHACNVTDPETFNALLLNGL 257 (268)
T ss_dssp -SSEEEEEESSCCTTHHHHCHHHHHHHHHHHH
T ss_pred -CcCeEEEeCCCCcchhhcCHHHHHHHHHHHH
Confidence 6899999999999999 99999999988763
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=241.06 Aligned_cols=250 Identities=14% Similarity=0.123 Sum_probs=169.0
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
.+.+|.+++|..+++.+ .++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+... ++++++++|
T Consensus 7 ~~~~g~~l~y~~~g~~~--~~~~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~-~~~~~~~~d 81 (266)
T 2xua_A 7 AAVNGTELHYRIDGERH--GNAPWIVLSNSLGTDLS-MWAPQVAALSKH-FRVLRYDTRGHGHSEAPKGP-YTIEQLTGD 81 (266)
T ss_dssp EECSSSEEEEEEESCSS--SCCCEEEEECCTTCCGG-GGGGGHHHHHTT-SEEEEECCTTSTTSCCCSSC-CCHHHHHHH
T ss_pred EEECCEEEEEEEcCCcc--CCCCeEEEecCccCCHH-HHHHHHHHHhcC-eEEEEecCCCCCCCCCCCCC-CCHHHHHHH
Confidence 34589999999987643 12678999999998887 668899999764 99999999999999875433 689999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh----hhhCCC
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV----AWLVPT 192 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 192 (308)
+.+++++++.+ +++++||||||.+|+.+|.++|++|+++|++++....... ........... ......
T Consensus 82 l~~~l~~l~~~-----~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 153 (266)
T 2xua_A 82 VLGLMDTLKIA-----RANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP---EVWVPRAVKARTEGMHALADA 153 (266)
T ss_dssp HHHHHHHTTCC-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCH---HHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHhcCCC-----ceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCch---HHHHHHHHHHHhcChHHHHHH
Confidence 99999998766 9999999999999999999999999999999986543210 00000000000 000000
Q ss_pred cccccCCCCCCCcc-cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHH
Q 035721 193 WRVVPTRGSLPMVS-FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
.... .+.... ..++.....+...... ............... .+..+.+.++++|+++++|++|.+++++.++.
T Consensus 154 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 227 (266)
T 2xua_A 154 VLPR----WFTADYMEREPVVLAMIRDVFVH-TDKEGYASNCEAIDA-ADLRPEAPGIKVPALVISGTHDLAATPAQGRE 227 (266)
T ss_dssp HHHH----HSCHHHHHHCHHHHHHHHHHHHT-SCHHHHHHHHHHHHH-CCCGGGGGGCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHH----HcCcccccCCHHHHHHHHHHHhh-CCHHHHHHHHHHHhc-cCchhhhccCCCCEEEEEcCCCCcCCHHHHHH
Confidence 0000 000000 0011111111100000 000011111111111 13445678899999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+.+ +++++++++ +||+++ ++|+++++.|.+++
T Consensus 228 ~~~~~--~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl 262 (266)
T 2xua_A 228 LAQAI--AGARYVELD-ASHISNIERADAFTKTVVDFL 262 (266)
T ss_dssp HHHHS--TTCEEEEES-CCSSHHHHTHHHHHHHHHHHH
T ss_pred HHHhC--CCCEEEEec-CCCCchhcCHHHHHHHHHHHH
Confidence 99988 678999999 999999 99999999888763
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=238.16 Aligned_cols=254 Identities=17% Similarity=0.090 Sum_probs=169.0
Q ss_pred EEcCCC-cEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 36 ITNSRG-LRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 36 ~~~~~g-~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
+.+.+| .+++|..++++ ++|+|||+||++ ++.. .|..+++.|.+. |+|+++|+||||.|+.+....++++
T Consensus 17 ~~~~~g~~~l~y~~~G~g----~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~ 90 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVG----NDQTVVLLHGGGPGAASWT-NFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNR 90 (291)
T ss_dssp EEESSSEEEEEEEEECTT----CSSEEEEECCCCTTCCHHH-HTTTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHH
T ss_pred EEEeCCcEEEEEEecCCC----CCCcEEEECCCCCccchHH-HHHHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHH
Confidence 455688 99999987642 246899999997 5544 567888899776 9999999999999987654346899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC--CchhhhhHHHhhhh
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP--PWPLEHLLFTVAWL 189 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 189 (308)
++++|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++.......... ............
T Consensus 91 ~~a~dl~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 163 (291)
T 2wue_A 91 YAAMALKGLFDQLGLG-----RVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSV-- 163 (291)
T ss_dssp HHHHHHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhCCC-----CeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhc--
Confidence 9999999999998776 9999999999999999999999999999999986532211110 111111111100
Q ss_pred CCCccc--ccCCCCCCC-cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH-----hh--hhcCCCCcceEEEeeC
Q 035721 190 VPTWRV--VPTRGSLPM-VSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD-----LQ--GRFEEVEVPMLICHGG 259 (308)
Q Consensus 190 ~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~i~~P~l~i~g~ 259 (308)
.+.... ......... ....+.......... .................+ .. +.+.++++|+++|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 239 (291)
T 2wue_A 164 APTRENLEAFLRVMVYDKNLITPELVDQRFALA----STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGR 239 (291)
T ss_dssp SCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHH----TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEET
T ss_pred cCCHHHHHHHHHHhccCcccCCHHHHHHHHHHh----cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecC
Confidence 000000 000000000 001111111111100 000111111111101000 11 5678899999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 260 DDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 240 ~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 287 (291)
T 2wue_A 240 EDRVNPLDGALVALKTI--PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287 (291)
T ss_dssp TCSSSCGGGGHHHHHHS--TTEEEEEESSCCSCHHHHTHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHC--CCCeEEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 99999999999999888 6899999999999999 99999999998765
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=231.68 Aligned_cols=250 Identities=16% Similarity=0.241 Sum_probs=164.9
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.||.+|+|..++. .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... +++++++
T Consensus 2 ~~~~~~g~~l~y~~~G~------g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~a 73 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS------GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG-NDYDTFA 73 (271)
T ss_dssp EEECTTSCEEEEEEESS------SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-CSHHHHH
T ss_pred eEEcCCCCEEEEEccCC------CCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCccCCCCCCC-CCHHHHH
Confidence 57789999999999873 356999999998887 678899999988999999999999999876443 5889999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCCC--CCch-hhhhHHHhh---
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKFK--PPWP-LEHLLFTVA--- 187 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~--~~~~-~~~~~~~~~--- 187 (308)
+|+.++++.++.+ +++++||||||.+++.++.++ |++|+++|++++......... +... .........
T Consensus 74 ~d~~~~l~~l~~~-----~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (271)
T 3ia2_A 74 DDIAQLIEHLDLK-----EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELL 148 (271)
T ss_dssp HHHHHHHHHHTCC-----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-----CceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHH
Confidence 9999999998776 999999999999777666655 899999999987543221110 0000 000000000
Q ss_pred ----hhCCCcc---cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEee
Q 035721 188 ----WLVPTWR---VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 188 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g 258 (308)
....... ....................... ............. .+..+.+.++++|+|+|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G 219 (271)
T 3ia2_A 149 KDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL---------ASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHG 219 (271)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHH---------SCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEE
T ss_pred hhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhh---------ccHHHHHHHHHHhhccCCcccccCCCCCEEEEEe
Confidence 0000000 00000000000000000000000 0011111111111 1334557889999999999
Q ss_pred CCCcccChHHHHH-HHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEE-LYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.++|++...+ +.+.+ +++++++++++||+++ ++|+++++.+.+++
T Consensus 220 ~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl 269 (271)
T 3ia2_A 220 DGDQIVPFETTGKVAAELI--KGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269 (271)
T ss_dssp TTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred CCCCcCChHHHHHHHHHhC--CCceEEEEcCCCCcccccCHHHHHHHHHHHh
Confidence 9999999987544 44555 6899999999999999 99999999988764
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=229.56 Aligned_cols=256 Identities=20% Similarity=0.208 Sum_probs=166.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++.+.+|.+++|..+++.+ .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .+++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~~~----~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 75 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGPRD----GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-GHDMDTYA 75 (275)
T ss_dssp EEECTTSCEEEEEEESCTT----SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHH
T ss_pred eEEccCCCEEEEEEcCCCC----CceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC-CCCHHHHH
Confidence 4667899999999987643 468999999998877 67889999999999999999999999986543 36899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhhh---
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVAW--- 188 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 188 (308)
+|+.++++.++.+ +++++||||||.+++.++.++ |++|+++|++++........ ............+..
T Consensus 76 ~dl~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T 1a88_A 76 ADVAALTEALDLR-----GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALA 150 (275)
T ss_dssp HHHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-----ceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHh
Confidence 9999999998766 999999999999999988876 99999999999754321110 000000000000000
Q ss_pred -----hCCCcccccC-CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCC
Q 035721 189 -----LVPTWRVVPT-RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 189 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~ 260 (308)
.......... ...................... .............. .+....+.++++|+++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 225 (275)
T 1a88_A 151 ANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM-----MGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTD 225 (275)
T ss_dssp HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETT
T ss_pred hhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh-----hcchHhHHHHHhhhhhcccccccccCCCCEEEEecCC
Confidence 0000000000 0000000000110000000000 00011111111111 122345678899999999999
Q ss_pred CcccChHH-HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 261 DVVCDPAC-VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 261 D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|.++|++. .+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 226 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 273 (275)
T 1a88_A 226 DQVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273 (275)
T ss_dssp CSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred CccCCcHHHHHHHHhhC--CCcEEEEcCCCCccHHHhCHHHHHHHHHHHh
Confidence 99999874 44555555 6899999999999999 99999999988763
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=231.98 Aligned_cols=254 Identities=17% Similarity=0.200 Sum_probs=166.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.+|.+++|..++. .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .+++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~------g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 73 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWGQ------GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-GYDFDTFA 73 (274)
T ss_dssp EEECTTSCEEEEEEECS------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHH
T ss_pred eEEccCCCEEEEEecCC------CceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCcHHHHH
Confidence 46788999999988762 457999999998877 67889999999999999999999999987543 36899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCC--CCCchhhhhH----HHhh
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKF--KPPWPLEHLL----FTVA 187 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~----~~~~ 187 (308)
+|+.++++.++.+ +++++||||||.+++.++.++ |++|+++|++++........ .......... ....
T Consensus 74 ~dl~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (274)
T 1a8q_A 74 DDLNDLLTDLDLR-----DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVL 148 (274)
T ss_dssp HHHHHHHHHTTCC-----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-----ceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhh
Confidence 9999999988765 999999999999999988776 89999999999754221110 0100000000 0000
Q ss_pred ----hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCC
Q 035721 188 ----WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 188 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D 261 (308)
................................. .............. .+..+.+.++++|+++++|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 223 (274)
T 1a8q_A 149 TERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM-----AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDD 223 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHT-----TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTC
T ss_pred ccHHHHHHHhcccccccccccccccHHHHHHHHHHhh-----hcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcC
Confidence 000000000000000000011111111111000 00111111111111 1234567889999999999999
Q ss_pred cccChHHH-HHHHHHhcCCCCcEEEecCCccccc-C--CchhhHHHhhhcC
Q 035721 262 VVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-G--EPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~--~~~~~~~~i~~~i 308 (308)
.++|++.. +.+.+.+ +++++++++++||+++ + +|+++++.|.+++
T Consensus 224 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl 272 (274)
T 1a8q_A 224 QVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272 (274)
T ss_dssp SSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhhC--CCceEEEECCCCCceecccCCHHHHHHHHHHHh
Confidence 99998844 4555555 6899999999999999 8 8999999988763
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=238.02 Aligned_cols=249 Identities=14% Similarity=0.139 Sum_probs=165.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
..+.+|.+++|...++ .++|||+||++++.. .|..+.+.|.++||+|+++|+||||.|+.+... ++++++++
T Consensus 11 ~~~~~g~~l~y~~~G~------g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~a~ 82 (281)
T 3fob_A 11 TENQAPIEIYYEDHGT------GKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQPWEG-YEYDTFTS 82 (281)
T ss_dssp EETTEEEEEEEEEESS------SEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred CCCCCceEEEEEECCC------CCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccc-cCHHHHHH
Confidence 3567889999988763 457999999998887 667889999888999999999999999876543 68999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCC--CCC-chh----hhhHH---
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKF--KPP-WPL----EHLLF--- 184 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~--~~~-~~~----~~~~~--- 184 (308)
|+.++++.++.+ +++|+||||||.+++.++..+ |++++++|++++........ .+. ... .....
T Consensus 83 dl~~ll~~l~~~-----~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (281)
T 3fob_A 83 DLHQLLEQLELQ-----NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVI 157 (281)
T ss_dssp HHHHHHHHTTCC-----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-----cEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhh
Confidence 999999998776 999999999999888776665 89999999998753321110 000 000 00000
Q ss_pred -----HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEe
Q 035721 185 -----TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~ 257 (308)
....+...+. ... . ....... ........... ............. ..+..+.+.++++|+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~-~~~--~-~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~ 228 (281)
T 3fob_A 158 NDRLAFLDEFTKGFF-AAG--D-RTDLVSE-SFRLYNWDIAA----GASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIH 228 (281)
T ss_dssp HHHHHHHHHHHHHHT-CBT--T-BCCSSCH-HHHHHHHHHHH----TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred hhHHHHHHHHHHHhc-ccc--c-ccccchH-HHHHHhhhhhc----ccChHHHHHHHHHccccchhhhhhhcCCCEEEEe
Confidence 0000000000 000 0 0000000 00000000000 0001111111111 1234456889999999999
Q ss_pred eCCCcccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 258 GGDDVVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 258 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|++|.++|++.. +.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 229 G~~D~~~p~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 279 (281)
T 3fob_A 229 GDSDATVPFEYSGKLTHEAI--PNSKVALIKGGPHGLNATHAKEFNEALLLFL 279 (281)
T ss_dssp ETTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred cCCCCCcCHHHHHHHHHHhC--CCceEEEeCCCCCchhhhhHHHHHHHHHHHh
Confidence 999999999865 6666777 7899999999999999 99999999998764
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=236.21 Aligned_cols=252 Identities=17% Similarity=0.145 Sum_probs=167.0
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC-cccc-CCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG-LVAH-IPDLN 111 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-~~~~-~~~~~ 111 (308)
..+.+.+|.+++|..+++.+ +|+|||+||++++....|..+++.|+ +||+|+++|+||||.|+. +... .++++
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~----~~~vvllHG~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVE----GPALFVLHGGPGGNAYVLREGLQDYL-EGFRVVYFDQRGSGRSLELPQDPRLFTVD 79 (286)
T ss_dssp EEEEECSSCEEEEEEESCTT----SCEEEEECCTTTCCSHHHHHHHGGGC-TTSEEEEECCTTSTTSCCCCSCGGGCCHH
T ss_pred eeEEeECCEEEEEEeecCCC----CCEEEEECCCCCcchhHHHHHHHHhc-CCCEEEEECCCCCCCCCCCccCcccCcHH
Confidence 34566789999999987642 57899999999887624678888885 479999999999999987 4331 46899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC----------CCCchhhh
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF----------KPPWPLEH 181 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~----------~~~~~~~~ 181 (308)
++++|+.++++.++.+ +++|+||||||.+|+.+|.++|+ |+++|++++........ ........
T Consensus 80 ~~a~dl~~ll~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 2yys_A 80 ALVEDTLLLAEALGVE-----RFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEEN 153 (286)
T ss_dssp HHHHHHHHHHHHTTCC-----SEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHH
T ss_pred HHHHHHHHHHHHhCCC-----cEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHH
Confidence 9999999999998766 99999999999999999999999 99999999864211000 00000000
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHH-H-HHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEe
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEW-K-RKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~ 257 (308)
....... ....... . .+. .+.... . ........... ......... ..... .+..+.+.++++|+++|+
T Consensus 154 ~~~~~~~-~~~~~~~--~-~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi~ 225 (286)
T 2yys_A 154 LKEALKR-EEPKALF--D-RLM--FPTPRGRMAYEWLAEGAGIL-GSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVLV 225 (286)
T ss_dssp HHHHHHH-SCHHHHH--H-HHH--CSSHHHHHHHHHHHHHTTCC-CCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEEE
T ss_pred HHHHhcc-CChHHHH--H-hhh--ccCCccccChHHHHHHHhhc-cccccchhh-cccccccCChhhhhhhcCCCEEEEE
Confidence 0000000 0000000 0 000 000000 0 00000000001 111111111 11111 123455788999999999
Q ss_pred eCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 258 GGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|++|.+++++ ++.+.+ + +++++++++++||+++ ++|+++++.|.+++
T Consensus 226 G~~D~~~~~~-~~~~~~-~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 273 (286)
T 2yys_A 226 GERDGTSYPY-AEEVAS-R--LRAPIRVLPEAGHYLWIDAPEAFEEAFKEAL 273 (286)
T ss_dssp ETTCTTTTTT-HHHHHH-H--HTCCEEEETTCCSSHHHHCHHHHHHHHHHHH
T ss_pred eCCCCcCCHh-HHHHHh-C--CCCCEEEeCCCCCCcChhhHHHHHHHHHHHH
Confidence 9999999999 999998 8 6789999999999999 99999999887753
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=233.24 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=162.6
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
+++|..+++.+. ..+++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+... .++++++++|+.++++
T Consensus 2 ~l~y~~~G~~~~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~--~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 2 KLNIRAQTAQNQ-HNNSPIVLVHGLFGSLD-NLGVLARDLVND-HNIIQVDVRNHGLSPREP--VMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCSSC-CCCCCEEEECCTTCCTT-TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS--CCCHHHHHHHHHHHHH
T ss_pred ceeeeecCcccc-CCCCCEEEEcCCcccHh-HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC--CcCHHHHHHHHHHHHH
Confidence 467888876432 23678999999998887 678899999876 999999999999998754 3588999999999999
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCC
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL 202 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (308)
.++.+ +++++||||||.+|+.+|.++|++|+++|++++................+............... ..
T Consensus 77 ~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 148 (255)
T 3bf7_A 77 ALQID-----KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAA---AI 148 (255)
T ss_dssp HHTCS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHH---HH
T ss_pred HcCCC-----CeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHH---HH
Confidence 98766 99999999999999999999999999999987643221110000000000000000000000000 00
Q ss_pred CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCc
Q 035721 203 PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKT 282 (308)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 282 (308)
......+............................... ....+.++++|+++|+|++|.+++++..+.+.+.+ ++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~ 225 (255)
T 3bf7_A 149 MRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-GWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--PQAR 225 (255)
T ss_dssp HTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHH-CCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC--TTEE
T ss_pred HhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhcc-ccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC--CCCe
Confidence 00001111111111111000000001111111111101 11346789999999999999999999999998888 6899
Q ss_pred EEEecCCccccc-CCchhhHHHhhhcC
Q 035721 283 LSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 283 ~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++++||+++ ++|+++++.|.+++
T Consensus 226 ~~~i~~~gH~~~~e~p~~~~~~i~~fl 252 (255)
T 3bf7_A 226 AHVIAGAGHWVHAEKPDAVLRAIRRYL 252 (255)
T ss_dssp ECCBTTCCSCHHHHCHHHHHHHHHHHH
T ss_pred EEEeCCCCCccccCCHHHHHHHHHHHH
Confidence 999999999999 99999999987763
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=232.27 Aligned_cols=254 Identities=19% Similarity=0.199 Sum_probs=165.4
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.+|.+++|..++. .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .+++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~------~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 73 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWGS------GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-GNDMDTYA 73 (273)
T ss_dssp EEECTTSCEEEEEEESC------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHH
T ss_pred eEecCCCcEEEEEEcCC------CCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC-CCCHHHHH
Confidence 46678999999988762 467999999998877 67889999999999999999999999986543 36899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhh----
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVA---- 187 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~---- 187 (308)
+|+.+++++++.+ +++++||||||.+++.++.++ |++|+++|++++........ ............+.
T Consensus 74 ~dl~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T 1a8s_A 74 DDLAQLIEHLDLR-----DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASL 148 (273)
T ss_dssp HHHHHHHHHTTCC-----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-----CeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhH
Confidence 9999999988765 999999999999999988776 89999999999754321110 00000000000000
Q ss_pred ----hhCCCcccccC-CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCC
Q 035721 188 ----WLVPTWRVVPT-RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 188 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~ 260 (308)
........... ...................... .............. .+....+.++++|+++++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 223 (273)
T 1a8s_A 149 ADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM-----AAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223 (273)
T ss_dssp HHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETT
T ss_pred hhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc-----ccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCC
Confidence 00000000000 0000000000111100000000 00011111111111 123345778999999999999
Q ss_pred CcccChHH-HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 261 DVVCDPAC-VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 261 D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|.++|++. .+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 224 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
T 1a8s_A 224 DQVVPIEASGIASAALV--KGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271 (273)
T ss_dssp CSSSCSTTTHHHHHHHS--TTCEEEEETTCCSCHHHHTHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHhC--CCcEEEEeCCCCCcchhhCHHHHHHHHHHHH
Confidence 99999884 45555665 6899999999999999 99999999988764
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=240.31 Aligned_cols=253 Identities=14% Similarity=0.054 Sum_probs=167.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
+.+|.+++|..++++ ++|+|||+||++++.. .|+.+++.|++. |+|+++|+||||.|+.+.. .++++++++|+
T Consensus 13 ~~~g~~l~y~~~G~g----~~~pvvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~-~~~~~~~a~dl 85 (316)
T 3afi_E 13 PVLGSSMAYRETGAQ----DAPVVLFLHGNPTSSH-IWRNILPLVSPV-AHCIAPDLIGFGQSGKPDI-AYRFFDHVRYL 85 (316)
T ss_dssp EETTEEEEEEEESCT----TSCEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTSCCCSS-CCCHHHHHHHH
T ss_pred EeCCEEEEEEEeCCC----CCCeEEEECCCCCchH-HHHHHHHHHhhC-CEEEEECCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 457889999988752 2458999999998887 678899999775 9999999999999987533 46899999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC-----------chhhhhHHHh
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP-----------WPLEHLLFTV 186 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-----------~~~~~~~~~~ 186 (308)
.++++.++.+ +++|+||||||.+|+.+|.++|++|+++|++++........... ..........
T Consensus 86 ~~ll~~l~~~-----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
T 3afi_E 86 DAFIEQRGVT-----SAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKF 160 (316)
T ss_dssp HHHHHHTTCC-----SEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-----CEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHh
Confidence 9999998776 99999999999999999999999999999998743210000000 0000000000
Q ss_pred hh------hCCCc-c-cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHH-------------HHHHHHHHhhhh
Q 035721 187 AW------LVPTW-R-VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATAL-------------ELLRVSRDLQGR 245 (308)
Q Consensus 187 ~~------~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 245 (308)
.. ..... . ................ ....+...... ........ .......+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T 3afi_E 161 RTPGEGEAMILEANAFVERVLPGGIVRKLGDE-EMAPYRTPFPT---PESRRPVLAFPRELPIAGEPADVYEALQSAHAA 236 (316)
T ss_dssp TSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHH-HHHHHHTTCCS---TGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHH
T ss_pred cCCchhhHHHhccchHHHHhcccccCCCCCHH-HHHHHHhhcCC---ccchhHHHHHHHhccccccchhhhhHHHHHHHh
Confidence 00 00000 0 0000000000001111 11111111000 00000000 011111223345
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++|+|++|.+++++..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 237 l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 298 (316)
T 3afi_E 237 LAASSYPKLLFTGEPGALVSPEFAERFAASL--TRCALIRLGAGLHYLQEDHADAIGRSVAGWI 298 (316)
T ss_dssp HHHCCSCEEEEEEEECSSSCHHHHHHHHHHS--SSEEEEEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCeEEEecCCCCccCHHHHHHHHHhC--CCCeEEEcCCCCCCchhhCHHHHHHHHHHHH
Confidence 6678999999999999999999999999988 6899999999999999 99999999987753
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=230.47 Aligned_cols=246 Identities=19% Similarity=0.158 Sum_probs=164.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH-HHHHHHHcCCeEEEecCCCCcCCCC--ccccCCCcchH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL-TAVLFAKSGFATCAIDHQGHGFSDG--LVAHIPDLNPV 113 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~ 113 (308)
.+.+|.+++|..+++.+ .|+|||+||++++.. .|.. +++.|.++||+|+++|+||||.|+. +....++++++
T Consensus 6 ~~~~g~~l~y~~~G~~~----~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~ 80 (298)
T 1q0r_A 6 VPSGDVELWSDDFGDPA----DPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 80 (298)
T ss_dssp EEETTEEEEEEEESCTT----SCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred eccCCeEEEEEeccCCC----CCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHH
Confidence 34689999999987533 468999999998877 5554 6699998899999999999999986 32334689999
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC-CCCcC--------------CCCCch
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC-GISQK--------------FKPPWP 178 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~-~~~~~--------------~~~~~~ 178 (308)
++|+.++++.++.+ +++++||||||.+|+.+|.++|++|+++|++++.. ..... ......
T Consensus 81 a~dl~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (298)
T 1q0r_A 81 AADAVAVLDGWGVD-----RAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQ 155 (298)
T ss_dssp HHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCC
T ss_pred HHHHHHHHHHhCCC-----ceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccccccc
Confidence 99999999998776 99999999999999999999999999999999865 21000 000000
Q ss_pred hhhhHHHhhhhCCC-c------------ccccCCCCCCCcccccHH----HHHHHhhC--CCCC-CCcchHHHHHHHHHH
Q 035721 179 LEHLLFTVAWLVPT-W------------RVVPTRGSLPMVSFKEEW----KRKLALSS--PRRP-VARPRAATALELLRV 238 (308)
Q Consensus 179 ~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~-~~~~~~~~~~~~~~~ 238 (308)
............+. . ...... . ....... ........ .... .. ... .. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~-~ 224 (298)
T 1q0r_A 156 QPFLDALALMNQPAEGRAAEVAKRVSKWRILSGT-G---VPFDDAEYARWEERAIDHAGGVLAEPYA--HYS----LT-L 224 (298)
T ss_dssp HHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCS-S---SCCCHHHHHHHHHHHHHHTTTCCSCCCG--GGG----CC-C
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHhhhhccCC-C---CCCCHHHHHHHHHHHhhccCCccchhhh--hhh----hh-c
Confidence 01011111100000 0 000000 0 0000110 01111111 0000 00 000 00 0
Q ss_pred HHHhhhh-cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 239 SRDLQGR-FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 239 ~~~~~~~-~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
..+.... ++++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++|| +.|+++++.|.+++
T Consensus 225 ~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH---e~p~~~~~~i~~fl 290 (298)
T 1q0r_A 225 PPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGH---ALPSSVHGPLAEVI 290 (298)
T ss_dssp CCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCS---SCCGGGHHHHHHHH
T ss_pred CcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC--CCCEEEEcCCCCC---CCcHHHHHHHHHHH
Confidence 0133455 7889999999999999999999999999888 6899999999999 77888888887653
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=232.02 Aligned_cols=252 Identities=12% Similarity=0.060 Sum_probs=163.0
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc----CCCc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH----IPDL 110 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~ 110 (308)
.+...+|.+++|...+. +|+|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+ .. .+++
T Consensus 12 ~~~~~~g~~l~y~~~G~------g~~lvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~~~ 82 (294)
T 1ehy_A 12 YEVQLPDVKIHYVREGA------GPTLLLLHGWPGFWW-EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKYSL 82 (294)
T ss_dssp EEEECSSCEEEEEEEEC------SSEEEEECCSSCCGG-GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGGCH
T ss_pred eEEEECCEEEEEEEcCC------CCEEEEECCCCcchh-hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCcCH
Confidence 34467899999988762 467999999998876 678999999876 99999999999999876 31 3689
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC-CCcCCCCC-----chhhhhH-
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG-ISQKFKPP-----WPLEHLL- 183 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~-~~~~~~~~-----~~~~~~~- 183 (308)
+++++|+.+++++++.+ +++++||||||.+|+.+|.++|++|+++|++++... ........ .......
T Consensus 83 ~~~a~dl~~ll~~l~~~-----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T 1ehy_A 83 DKAADDQAALLDALGIE-----KAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ 157 (294)
T ss_dssp HHHHHHHHHHHHHTTCC-----CEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecC
Confidence 99999999999998876 999999999999999999999999999999997432 11000000 0000000
Q ss_pred -HHhhhhCCCcc----------cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhh-----hhc
Q 035721 184 -FTVAWLVPTWR----------VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQ-----GRF 246 (308)
Q Consensus 184 -~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~ 246 (308)
........... ..... .....+..... ..+..... ............... .... ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (294)
T 1ehy_A 158 LDMAVEVVGSSREVCKKYFKHFFDHWS--YRDELLTEEEL-EVHVDNCM---KPDNIHGGFNYYRANIRPDAALWTDLDH 231 (294)
T ss_dssp CHHHHHHHTSCHHHHHHHHHHHHHHTS--SSSCCSCHHHH-HHHHHHHT---STTHHHHHHHHHHHHSSSSCCCCCTGGG
T ss_pred cchhHHHhccchhHHHHHHHHHhhccc--CCCCCCCHHHH-HHHHHHhc---CCcccchHHHHHHHHHhhhhhhcCCccc
Confidence 00000000000 00000 00000000000 00000000 000111111111111 0001 123
Q ss_pred CCCCcceEEEeeCCCcccCh-HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 247 EEVEVPMLICHGGDDVVCDP-ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++++|+++|+|++|.+++. +..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 232 ~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 232 TMSDLPVTMIWGLGDTCVPYAPLIEFVPKYY--SNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SCBCSCEEEEEECCSSCCTTHHHHHHHHHHB--SSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred CcCCCCEEEEEeCCCCCcchHHHHHHHHHHc--CCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 48999999999999999884 5677777777 6899999999999999 99999999998875
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=232.43 Aligned_cols=250 Identities=14% Similarity=0.094 Sum_probs=165.4
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
+.+|.+++|..++. .++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .++++++++|+
T Consensus 9 ~~~g~~l~y~~~g~------g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~dl 80 (277)
T 1brt_A 9 NSTSIDLYYEDHGT------GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTT-GYDYDTFAADL 80 (277)
T ss_dssp TTEEEEEEEEEECS------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH
T ss_pred cCCCcEEEEEEcCC------CCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCC-CccHHHHHHHH
Confidence 56788999988762 345999999998877 67899999999899999999999999987653 36899999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-CccEEEEeCCcCCCCcCC--CCCc-hhhhhHHHhhh-hCC-
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AWDGLILNGAMCGISQKF--KPPW-PLEHLLFTVAW-LVP- 191 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~--~~~~-~~~~~~~~~~~-~~~- 191 (308)
.+++++++.. +++++||||||.+|+.+|.++|+ +|+++|++++........ .... ........+.. ...
T Consensus 81 ~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
T 1brt_A 81 NTVLETLDLQ-----DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKAD 155 (277)
T ss_dssp HHHHHHHTCC-----SEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCC-----ceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcC
Confidence 9999998766 99999999999999999999998 999999999854321110 0000 00000000000 000
Q ss_pred ------CcccccCCCCC--CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH-HHHhhhhcCCCCcceEEEeeCCCc
Q 035721 192 ------TWRVVPTRGSL--PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV-SRDLQGRFEEVEVPMLICHGGDDV 262 (308)
Q Consensus 192 ------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~ 262 (308)
........ .. ...... ............ ............. ..+..+.+.++++|+++++|++|.
T Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 229 (277)
T 1brt_A 156 RYAFYTGFFNDFYN-LDENLGTRIS-EEAVRNSWNTAA----SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDR 229 (277)
T ss_dssp HHHHHHHHHHHHTT-HHHHBTTTBC-HHHHHHHHHHHH----HSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCS
T ss_pred chhhHHHHHHHHhh-ccccccccCC-HHHHHHHHHHHh----ccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCc
Confidence 00000000 00 000000 000000000000 0000000000000 012234567889999999999999
Q ss_pred ccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 263 VCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|++.+ +.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 275 (277)
T 1brt_A 230 TLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275 (277)
T ss_dssp SSCGGGTHHHHHHHC--TTSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHC--CCCcEEEeCCCCcchhhhCHHHHHHHHHHHH
Confidence 9999888 8888888 6899999999999999 99999999988763
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=233.68 Aligned_cols=246 Identities=17% Similarity=0.118 Sum_probs=164.6
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP 112 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 112 (308)
.+...+|.+++|...+. .++|||+||++.+.. ..|..+.+.|. ++|+|+++|+||||.|+.+....+++++
T Consensus 8 ~~~~~~g~~l~y~~~G~------g~~vvllHG~~~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 80 (282)
T 1iup_A 8 KSILAAGVLTNYHDVGE------GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYSKDS 80 (282)
T ss_dssp EEEEETTEEEEEEEECC------SSEEEEECCCCTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCCHHH
T ss_pred ceEEECCEEEEEEecCC------CCeEEEECCCCCCccHHHHHHHHHHhhc-cCCEEEEECCCCCCCCCCCCCCCCCHHH
Confidence 34456899999988752 357999999875543 24667778884 5799999999999999876543468999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH------HHh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL------FTV 186 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~------~~~ 186 (308)
+++|+.++++.++.+ +++|+||||||.+|+.+|.++|++|+++|++++...... ......... ..+
T Consensus 81 ~a~dl~~~l~~l~~~-----~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 152 (282)
T 1iup_A 81 WVDHIIGIMDALEIE-----KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFD---VTEGLNAVWGYTPSIENM 152 (282)
T ss_dssp HHHHHHHHHHHTTCC-----SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCC---CCHHHHHHHTCCSCHHHH
T ss_pred HHHHHHHHHHHhCCC-----ceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCC---CCHHHHHHhcCCCcHHHH
Confidence 999999999998766 999999999999999999999999999999998653211 000000000 000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH-----HHHHHh---hhhcCCCCcceEEEee
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL-----RVSRDL---QGRFEEVEVPMLICHG 258 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~i~~P~l~i~g 258 (308)
......... .................. ..........+. ...... .+.+.++++|+++|+|
T Consensus 153 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 221 (282)
T 1iup_A 153 RNLLDIFAY-------DRSLVTDELARLRYEASI----QPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHG 221 (282)
T ss_dssp HHHHHHHCS-------SGGGCCHHHHHHHHHHHT----STTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred HHHHHHhhc-------CcccCCHHHHHHHHhhcc----ChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEec
Confidence 000000000 000000111110000000 000000000000 000111 1567889999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 222 ~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 270 (282)
T 1iup_A 222 REDQVVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 270 (282)
T ss_dssp TTCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhC--CCCeEEEECCCCCCccccCHHHHHHHHHHHH
Confidence 999999999999999988 6899999999999999 99999999887753
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=230.61 Aligned_cols=233 Identities=18% Similarity=0.113 Sum_probs=157.4
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC---cchHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD---LNPVV 114 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~---~~~~~ 114 (308)
..+|.+++|..+++. .++|||+||++++....|..+++.|.++||+|+++|+||||.|+..... ++ +.+.+
T Consensus 8 ~~~g~~l~~~~~g~~-----~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~ 81 (254)
T 2ocg_A 8 AVNGVQLHYQQTGEG-----DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRD-FPADFFERDA 81 (254)
T ss_dssp EETTEEEEEEEEECC-----SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCC-CCTTHHHHHH
T ss_pred EECCEEEEEEEecCC-----CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCC-CChHHHHHHH
Confidence 458889999887642 4679999999887333567889999888999999999999999865332 35 44556
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
+|+.++++.+... +++++||||||.+|+.+|.++|++|+++|++++...... ........ .....
T Consensus 82 ~~~~~~l~~l~~~-----~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---------~~~~~~~~-~~~~~ 146 (254)
T 2ocg_A 82 KDAVDLMKALKFK-----KVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTD---------EDSMIYEG-IRDVS 146 (254)
T ss_dssp HHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCH---------HHHHHHHT-TSCGG
T ss_pred HHHHHHHHHhCCC-----CEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccCh---------hhHHHHHH-HHHHH
Confidence 6666666665443 999999999999999999999999999999988543210 00000000 00000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH---------HhhhhcCCCCcceEEEeeCCCcccC
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
.... ..... ....+.. .........+..... ...+.+.++++|+++++|++|.++|
T Consensus 147 ------~~~~-~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 211 (254)
T 2ocg_A 147 ------KWSE-RTRKP-LEALYGY-------DYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP 211 (254)
T ss_dssp ------GSCH-HHHHH-HHHHHCH-------HHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC
T ss_pred ------HHHH-HhHHH-HHHHhcc-------hhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC
Confidence 0000 00000 0000000 000000001111101 1134567899999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 212 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 212 RFHADFIHKHV--KGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHHHHHHHHS--TTCEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCCEEEEcCCCCCchhhhCHHHHHHHHHHHh
Confidence 99999999888 6789999999999999 99999999988764
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=234.93 Aligned_cols=247 Identities=17% Similarity=0.111 Sum_probs=162.6
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHH-HHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTA-VLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
.+++|..+++ .++|||+||++ ++.. .|..++ +.|.+. |+|+++|+||||.|+.+....++++++++|+
T Consensus 23 ~~l~y~~~G~------g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl 94 (286)
T 2puj_A 23 FNIHYNEAGN------GETVIMLHGGGPGAGGWS-NYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVMDEQRGLVNARAV 94 (286)
T ss_dssp EEEEEEEECC------SSEEEEECCCSTTCCHHH-HHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHH
T ss_pred EEEEEEecCC------CCcEEEECCCCCCCCcHH-HHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCCcCcCHHHHHHHH
Confidence 8999988753 35799999997 5444 567788 889776 9999999999999987654346889999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC--CCchhhhhHHHhhhhCCCccc
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK--PPWPLEHLLFTVAWLVPTWRV 195 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (308)
.++++.++.+ +++|+||||||.+|+.+|.++|++|+++|++++......... ............. .+....
T Consensus 95 ~~~l~~l~~~-----~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 167 (286)
T 2puj_A 95 KGLMDALDID-----RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA--EPSYET 167 (286)
T ss_dssp HHHHHHTTCC-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHH--SCCHHH
T ss_pred HHHHHHhCCC-----ceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhh--CCcHHH
Confidence 9999988766 999999999999999999999999999999998653221111 1001111111100 000000
Q ss_pred c-c--CCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH----HHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 196 V-P--TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV----SRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 196 ~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
. . ...........+.......... ................ ..+....+.++++|+|+|+|++|.++|++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~ 244 (286)
T 2puj_A 168 LKQMLQVFLYDQSLITEELLQGRWEAI---QRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDH 244 (286)
T ss_dssp HHHHHHHHCSCGGGCCHHHHHHHHHHH---HHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHH
T ss_pred HHHHHHHHhcCCccCCHHHHHHHHHHh---hcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHH
Confidence 0 0 0000000000000000000000 0000000111110000 012334678899999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 269 VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 245 ~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 283 (286)
T 2puj_A 245 GLKLLWNI--DDARLHVFSKCGAWAQWEHADEFNRLVIDFL 283 (286)
T ss_dssp HHHHHHHS--SSEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHC--CCCeEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 99999988 6899999999999999 99999999987763
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=239.67 Aligned_cols=256 Identities=17% Similarity=0.150 Sum_probs=164.5
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCcc---ccCCCc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLV---AHIPDL 110 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~---~~~~~~ 110 (308)
.+...+|.+++|..+++..+..+.++|||+||++++...| ......|.+ .||+|+++|+||||.|+..+ ...++.
T Consensus 31 ~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w-~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~ 109 (330)
T 3nwo_A 31 RTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNY-VANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTP 109 (330)
T ss_dssp EEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGG-GGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCH
T ss_pred eeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhH-HHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccH
Confidence 3446689999999998753322244799999998887644 456677765 58999999999999998622 223688
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
+.+++|+.++++.++.+ +++|+||||||.+|+.+|.++|++|.++|++++...... ...... ......
T Consensus 110 ~~~a~dl~~ll~~lg~~-----~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~------~~~~~~-~~~~~~ 177 (330)
T 3nwo_A 110 QLFVDEFHAVCTALGIE-----RYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRL------WSEAAG-DLRAQL 177 (330)
T ss_dssp HHHHHHHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHH------HHHHHH-HHHHHS
T ss_pred HHHHHHHHHHHHHcCCC-----ceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHH------HHHHHH-HHHHhc
Confidence 89999999999999876 999999999999999999999999999999998543210 000000 000000
Q ss_pred CCcc------cccCCCCCCCcccccHHHHHHHhhCCCCCC-CcchHHHH-HHH------HHH--------------HHHh
Q 035721 191 PTWR------VVPTRGSLPMVSFKEEWKRKLALSSPRRPV-ARPRAATA-LEL------LRV--------------SRDL 242 (308)
Q Consensus 191 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~------~~~--------------~~~~ 242 (308)
+... ..... ......+. ......+........ ........ ..+ ... ..+.
T Consensus 178 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (330)
T 3nwo_A 178 PAETRAALDRHEAAG-TITHPDYL-QAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSV 255 (330)
T ss_dssp CHHHHHHHHHHHHHT-CTTSHHHH-HHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBC
T ss_pred CHHHHHHHHHHHhcc-CCCCHHHH-HHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCch
Confidence 0000 00000 00000000 000000111000000 00001000 000 000 0122
Q ss_pred hhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 243 QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 243 ~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+.+.++++|+|+|+|++|.++| ...+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 256 ~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i--p~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL 319 (330)
T 3nwo_A 256 IDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI--PDVRSHVFPGTSHCTHLEKPEEFRAVVAQFL 319 (330)
T ss_dssp GGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC--SSEEEEEETTCCTTHHHHSHHHHHHHHHHHH
T ss_pred hhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC--CCCcEEEeCCCCCchhhcCHHHHHHHHHHHH
Confidence 34577889999999999999875 5678888888 7899999999999999 99999999988763
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=225.69 Aligned_cols=235 Identities=14% Similarity=0.124 Sum_probs=158.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 109 (308)
+...+...||.+|+|..++|... ..++|+|||+||++++.. .|..+++.|+++||+|+++|+||| |.|++.... ++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~-~~ 85 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE-FT 85 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------C-CC
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccc-ee
Confidence 45577788999999998887532 124789999999998877 678999999988999999999999 999875443 57
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
++++++|+.++++++... +..+++++||||||.+|+.+|.+ | +++++|++++..... .........
T Consensus 86 ~~~~~~D~~~~~~~l~~~--~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~---------~~~~~~~~~- 151 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK--GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLR---------DTLEKALGF- 151 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHH---------HHHHHHHSS-
T ss_pred hHHHHHHHHHHHHHHHhC--CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHH---------HHHHHHhhh-
Confidence 888999999999988743 55699999999999999999998 7 899999988643211 000000000
Q ss_pred CCCcccccCCCCCCCc------ccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 190 VPTWRVVPTRGSLPMV------SFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
........ ..... ............... + ....+....+.++++|+|+++|++|.+
T Consensus 152 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~l~~i~~PvLii~G~~D~~ 213 (305)
T 1tht_A 152 --DYLSLPID-ELPNDLDFEGHKLGSEVFVRDCFEHH--W-------------DTLDSTLDKVANTSVPLIAFTANNDDW 213 (305)
T ss_dssp --CGGGSCGG-GCCSEEEETTEEEEHHHHHHHHHHTT--C-------------SSHHHHHHHHTTCCSCEEEEEETTCTT
T ss_pred --hhhhcchh-hCcccccccccccCHHHHHHHHHhcc--c-------------cchhhHHHHHhhcCCCEEEEEeCCCCc
Confidence 00000000 00000 000000000000000 0 000123456788999999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEEN 300 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 300 (308)
+|++.++.+++.++.+++++++++++||.++++|+.+
T Consensus 214 vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~e~p~~~ 250 (305)
T 1tht_A 214 VKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVL 250 (305)
T ss_dssp SCHHHHHHHHTTCTTCCEEEEEETTCCSCTTSSHHHH
T ss_pred cCHHHHHHHHHhcCCCCcEEEEeCCCCCchhhCchHH
Confidence 9999999999887656789999999999988777744
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=224.09 Aligned_cols=237 Identities=19% Similarity=0.204 Sum_probs=165.2
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCc--cchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGE--SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
..+|.+|++..+.|.....++|+|||+||++++ .. .|..+++.|.++||+|+++|+||||.|+..... +++.++++
T Consensus 7 ~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 84 (251)
T 2wtm_A 7 DCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGHGKSDGKFED-HTLFKWLT 84 (251)
T ss_dssp EETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG-CCHHHHHH
T ss_pred ecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCCCCCCCcccc-CCHHHHHH
Confidence 458899999998886522357899999999988 54 678899999999999999999999999875433 57888899
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV 195 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
|+.++++.+.... ...+++++||||||.+++.+|.++|++|+++|+++|...... ... .........
T Consensus 85 d~~~~~~~l~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---------~~~---~~~~~~~~~ 151 (251)
T 2wtm_A 85 NILAVVDYAKKLD-FVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPE---------IAR---TGELLGLKF 151 (251)
T ss_dssp HHHHHHHHHTTCT-TEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHH---------HHH---HTEETTEEC
T ss_pred HHHHHHHHHHcCc-ccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHH---------HHh---hhhhccccC
Confidence 9999999986431 123899999999999999999999999999999998532110 000 000000000
Q ss_pred ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHH
Q 035721 196 VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 275 (308)
.. . .... ..... ... .... ....... ..+..+.+.++++|+++++|++|.++|++.++.+.+.
T Consensus 152 ~~-~-~~~~-~~~~~----------~~~--~~~~-~~~~~~~-~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 214 (251)
T 2wtm_A 152 DP-E-NIPD-ELDAW----------DGR--KLKG-NYVRVAQ-TIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQ 214 (251)
T ss_dssp BT-T-BCCS-EEEET----------TTE--EEET-HHHHHHT-TCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred Cc-h-hcch-HHhhh----------hcc--ccch-HHHHHHH-ccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHh
Confidence 00 0 0000 00000 000 0000 0000000 0112234567899999999999999999999999988
Q ss_pred hcCCCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 276 AASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 276 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
+ +++++++++++||++.++|+++.+.+.+++
T Consensus 215 ~--~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 245 (251)
T 2wtm_A 215 Y--KNCKLVTIPGDTHCYDHHLELVTEAVKEFM 245 (251)
T ss_dssp S--SSEEEEEETTCCTTCTTTHHHHHHHHHHHH
T ss_pred C--CCcEEEEECCCCcccchhHHHHHHHHHHHH
Confidence 8 689999999999998677888888887653
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=231.07 Aligned_cols=261 Identities=13% Similarity=0.021 Sum_probs=173.6
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
++.+..++ ..+|.+++|..+++++ +|+|||+||++++.. .|..+.+.|+ +||+|+++|+||||.|+.... .+
T Consensus 8 ~~~~~~~~-~~~g~~l~~~~~g~~~----~~~vl~lHG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~ 79 (299)
T 3g9x_A 8 FPFDPHYV-EVLGERMHYVDVGPRD----GTPVLFLHGNPTSSY-LWRNIIPHVA-PSHRCIAPDLIGMGKSDKPDL-DY 79 (299)
T ss_dssp CCCCCEEE-EETTEEEEEEEESCSS----SCCEEEECCTTCCGG-GGTTTHHHHT-TTSCEEEECCTTSTTSCCCCC-CC
T ss_pred cccceeee-eeCCeEEEEEecCCCC----CCEEEEECCCCccHH-HHHHHHHHHc-cCCEEEeeCCCCCCCCCCCCC-cc
Confidence 33444444 5588999999987643 578999999998887 6678889886 489999999999999988765 36
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+++++++|+.++++.+..+ +++++|||+||.+++.+|.++|++|+++|++++.......................
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEALGLE-----EVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRT 154 (299)
T ss_dssp CHHHHHHHHHHHHHHTTCC-----SEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHhCCC-----cEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcC
Confidence 8999999999999988665 99999999999999999999999999999999654433111111111111111100
Q ss_pred hC-CCcccccCC-------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH-------------HHHHHHHhhhhcC
Q 035721 189 LV-PTWRVVPTR-------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE-------------LLRVSRDLQGRFE 247 (308)
Q Consensus 189 ~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 247 (308)
.. ......... .......+...... .+...... ......... ......+....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 230 (299)
T 3g9x_A 155 ADVGRELIIDQNAFIEGALPKCVVRPLTEVEMD-HYREPFLK---PVDREPLWRFPNELPIAGEPANIVALVEAYMNWLH 230 (299)
T ss_dssp SSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHH-HHHGGGSS---GGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHH
T ss_pred CCcchhhhccchhhHHHhhhhhhccCCCHHHHH-HHHHHhcc---ccccchhhhhhhhhhhccccchhhhhhhhhhhhcc
Confidence 00 000000000 00000001111111 11110000 000011111 1111124445577
Q ss_pred CCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 248 EVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 248 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++|+++++|++|.+++++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+.+
T Consensus 231 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~ 290 (299)
T 3g9x_A 231 QSPVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 290 (299)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHHCHHHHHHHHHHHS
T ss_pred cCCCCeEEEecCCCCCCCHHHHHHHHhhC--CCCeEEEeCCCCCcchhcCHHHHHHHHHHHH
Confidence 88999999999999999999999999998 6799999999999999 99999999987653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=221.91 Aligned_cols=254 Identities=19% Similarity=0.160 Sum_probs=172.3
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcchH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNPV 113 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 113 (308)
.+...+|.+++|..+++++ +|+||++||++++.. .|..+++.|.++||+|+++|+||+|.|.... ...++.+++
T Consensus 7 ~~~~~~g~~l~~~~~g~~~----~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 81 (286)
T 3qit_A 7 KFLEFGGNQICLCSWGSPE----HPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTF 81 (286)
T ss_dssp EEEEETTEEEEEEEESCTT----SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHH
T ss_pred heeecCCceEEEeecCCCC----CCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHH
Confidence 3446689999999987643 678999999998887 6689999999999999999999999998765 234688899
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++|+.++++.+... +++++|||+||.+++.++.++|++|+++|++++.......... .................
T Consensus 82 ~~~~~~~~~~~~~~-----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 155 (286)
T 3qit_A 82 LAQIDRVIQELPDQ-----PLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE-SAVNQLTTCLDYLSSTP 155 (286)
T ss_dssp HHHHHHHHHHSCSS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C-CHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhcCCC-----CEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch-hhhHHHHHHHHHHhccc
Confidence 99999999887655 9999999999999999999999999999999997664432211 11122222211111110
Q ss_pred ccccCCCCCCCc------------ccccHHHHHHHhhCC----C--CCCCcchHHHHHHHHH-----HHHHhhhhcCCCC
Q 035721 194 RVVPTRGSLPMV------------SFKEEWKRKLALSSP----R--RPVARPRAATALELLR-----VSRDLQGRFEEVE 250 (308)
Q Consensus 194 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~ 250 (308)
... ..... ............... . ................ ...+....+.+++
T Consensus 156 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 231 (286)
T 3qit_A 156 QHP----IFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQ 231 (286)
T ss_dssp CCC----CBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCC
T ss_pred ccc----ccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccC
Confidence 000 00000 000000000000000 0 0000000000000000 2234455567889
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
+|+++++|++|.+++++..+.+.+.+ ++++++++++ ||+++ ++|+++++.|.+
T Consensus 232 ~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 232 VPTTLVYGDSSKLNRPEDLQQQKMTM--TQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp SCEEEEEETTCCSSCHHHHHHHHHHS--TTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred CCeEEEEeCCCcccCHHHHHHHHHHC--CCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 99999999999999999999999988 6789999999 99999 999999988865
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=228.51 Aligned_cols=253 Identities=17% Similarity=0.113 Sum_probs=165.8
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
..+...+|.+++|..+++. + .|+|||+||++ ++.. .|..+.+.|.+. |+|+++|+||||.|+.+....+++
T Consensus 9 ~~~~~~~g~~l~y~~~g~~-g---~p~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 82 (285)
T 1c4x_A 9 EKRFPSGTLASHALVAGDP-Q---SPAVVLLHGAGPGAHAAS-NWRPIIPDLAEN-FFVVAPDLIGFGQSEYPETYPGHI 82 (285)
T ss_dssp EEEECCTTSCEEEEEESCT-T---SCEEEEECCCSTTCCHHH-HHGGGHHHHHTT-SEEEEECCTTSTTSCCCSSCCSSH
T ss_pred ceEEEECCEEEEEEecCCC-C---CCEEEEEeCCCCCCcchh-hHHHHHHHHhhC-cEEEEecCCCCCCCCCCCCcccch
Confidence 3455678999999887642 2 35599999997 4443 567888889775 999999999999998765434688
Q ss_pred chH----HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 111 NPV----VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 111 ~~~----~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
+++ ++|+.++++.++.+ +++++||||||.+|+.+|.++|++|+++|++++........ ...........
T Consensus 83 ~~~~~~~~~dl~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~ 155 (285)
T 1c4x_A 83 MSWVGMRVEQILGLMNHFGIE-----KSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR--PPELARLLAFY 155 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC--CHHHHHHHTGG
T ss_pred hhhhhhHHHHHHHHHHHhCCC-----ccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCcc--chhHHHHHHHh
Confidence 999 99999999988765 99999999999999999999999999999999865321110 00000000000
Q ss_pred hhhCCCcc----cccCCCCCCCccc--ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-------HHhhhhcCCCCcce
Q 035721 187 AWLVPTWR----VVPTRGSLPMVSF--KEEWKRKLALSSPRRPVARPRAATALELLRVS-------RDLQGRFEEVEVPM 253 (308)
Q Consensus 187 ~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~ 253 (308)
. .+... ..... ....... .+.......... ................ ......+.++++|+
T Consensus 156 ~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 228 (285)
T 1c4x_A 156 A--DPRLTPYRELIHSF-VYDPENFPGMEEIVKSRFEVA----NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDV 228 (285)
T ss_dssp G--SCCHHHHHHHHHTT-SSCSTTCTTHHHHHHHHHHHH----HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCE
T ss_pred c--cccHHHHHHHHHHh-hcCcccccCcHHHHHHHHHhc----cCHHHHHHHHHHhccccccccccccchhhhccCCCCE
Confidence 0 00000 00000 0000000 000000000000 0000011111111000 00124567899999
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|+|++|.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 229 lii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 282 (285)
T 1c4x_A 229 LVFHGRQDRIVPLDTSLYLTKHL--KHAELVVLDRCGHWAQLERWDAMGPMLMEHF 282 (285)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHC--SSEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred EEEEeCCCeeeCHHHHHHHHHhC--CCceEEEeCCCCcchhhcCHHHHHHHHHHHH
Confidence 99999999999999999999988 6799999999999999 99999999887763
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=223.39 Aligned_cols=254 Identities=15% Similarity=0.113 Sum_probs=161.7
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPD 109 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~ 109 (308)
.++.++.+.+|.+++|..+++.++ +++|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ...++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~~---~~~vvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~ 79 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDIS---RPPVLCLPGLTRNAR-DFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQ 79 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCTT---SCCEEEECCTTCCGG-GGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSGGGCS
T ss_pred cccCeeecCCCceEEEEEcCCCCC---CCcEEEECCCCcchh-hHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCccccC
Confidence 345677888999999999886542 678999999998877 66889999976 7999999999999998653 23468
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC--------C-CC--ch
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF--------K-PP--WP 178 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--------~-~~--~~ 178 (308)
++++++|+.++++.++.. +++++||||||.+|+.+|.++|++|+++|++++........ . .. ..
T Consensus 80 ~~~~a~dl~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 80 PMQYLQDLEALLAQEGIE-----RFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp HHHHHHHHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESS
T ss_pred HHHHHHHHHHHHHhcCCC-----ceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCccccc
Confidence 899999999999998766 99999999999999999999999999999987543221000 0 00 00
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHH---HHHHhhCCCC-C--CCcchHHH-HHHH--HHHHHHhhhhcCCC
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK---RKLALSSPRR-P--VARPRAAT-ALEL--LRVSRDLQGRFEEV 249 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~--~~~~~~~~-~~~~--~~~~~~~~~~~~~i 249 (308)
.......+..... . .+. ......+. ...+...... . ........ .... .....+....+.++
T Consensus 155 ~~~~~~~~~~~~~-------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T 3bwx_A 155 WMHAARALQESSG-------D-VYP-DWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDAL 225 (285)
T ss_dssp HHHHHHHHHHHHT-------T-TST-TCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHhhh-------h-ccc-ccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHc
Confidence 0000000000000 0 000 00000000 0000000000 0 00000000 0000 00000001112223
Q ss_pred -CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 250 -EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 250 -~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++|+++|+|++|.+++++..+.+.+. +++++++++++||+++ ++|+.+ +.|.++
T Consensus 226 ~~~P~lii~G~~D~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~~-~~i~~f 281 (285)
T 3bwx_A 226 ATRPLLVLRGETSDILSAQTAAKMASR---PGVELVTLPRIGHAPTLDEPESI-AAIGRL 281 (285)
T ss_dssp TTSCEEEEEETTCSSSCHHHHHHHHTS---TTEEEEEETTCCSCCCSCSHHHH-HHHHHH
T ss_pred cCCCeEEEEeCCCCccCHHHHHHHHhC---CCcEEEEeCCCCccchhhCchHH-HHHHHH
Confidence 69999999999999999988888766 4799999999999999 889876 566654
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=229.25 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=107.5
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc--c-c
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL--V-A 105 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~-~ 105 (308)
+......+.+.+|.+++|..++. .|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+ . .
T Consensus 8 ~~~~~~~~~~~~g~~l~y~~~G~------g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~ 80 (328)
T 2cjp_A 8 MKKIEHKMVAVNGLNMHLAELGE------GPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDP 80 (328)
T ss_dssp -CCCEEEEEEETTEEEEEEEECS------SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCG
T ss_pred HhhhheeEecCCCcEEEEEEcCC------CCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCc
Confidence 33344556677899999988762 468999999998876 678899999888999999999999999865 2 2
Q ss_pred cCCCcchHHHHHHHHHHHHH--HhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 106 HIPDLNPVVEDAISFFDSFR--ARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~--~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
..++++++++|+.++++.++ .+ +++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 81 ~~~~~~~~a~dl~~~l~~l~~~~~-----~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 81 SKFSILHLVGDVVALLEAIAPNEE-----KVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHF 139 (328)
T ss_dssp GGGSHHHHHHHHHHHHHHHCTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ccccHHHHHHHHHHHHHHhcCCCC-----CeEEEEECHHHHHHHHHHHhChhheeEEEEEccCC
Confidence 23688999999999999987 55 99999999999999999999999999999998753
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-36 Score=232.88 Aligned_cols=251 Identities=14% Similarity=0.094 Sum_probs=163.8
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
+.+|.+++|..++. .++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++|+
T Consensus 9 ~~~g~~l~y~~~g~------~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl 80 (279)
T 1hkh_A 9 NSTPIELYYEDQGS------GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNT-GYDYDTFAADL 80 (279)
T ss_dssp TTEEEEEEEEEESS------SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHH
T ss_pred CCCCeEEEEEecCC------CCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 56788999988752 346999999998877 67889999999999999999999999987653 36899999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-CccEEEEeCCcCCCCcCCC--CCchhhhhHHHhhhhC----
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AWDGLILNGAMCGISQKFK--PPWPLEHLLFTVAWLV---- 190 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---- 190 (308)
.++++.+..+ +++++||||||.+++.+|.++|+ +|+++|++++......... ...........+....
T Consensus 81 ~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (279)
T 1hkh_A 81 HTVLETLDLR-----DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDR 155 (279)
T ss_dssp HHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCCC-----ceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhh
Confidence 9999998766 99999999999999999999998 9999999998543211100 0000000000000000
Q ss_pred ----CCcccccCCCC-CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH-HHHhhhhcCCC---CcceEEEeeCCC
Q 035721 191 ----PTWRVVPTRGS-LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV-SRDLQGRFEEV---EVPMLICHGGDD 261 (308)
Q Consensus 191 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i---~~P~l~i~g~~D 261 (308)
........... ........ ............. .... ....... ..+....+.++ ++|+++++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D 230 (279)
T 1hkh_A 156 FAWFTDFYKNFYNLDENLGSRISE-QAVTGSWNVAIGS-APVA---AYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKD 230 (279)
T ss_dssp HHHHHHHHHHHHTHHHHBTTTBCH-HHHHHHHHHHHTS-CTTH---HHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTC
T ss_pred hhhHHHHHhhhhhcccCCcccccH-HHHHhhhhhhccC-cHHH---HHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCC
Confidence 00000000000 00000000 0000000000000 0000 0000110 01222345567 899999999999
Q ss_pred cccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 262 VVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++|++.+ +.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 231 ~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 277 (279)
T 1hkh_A 231 NILPIDATARRFHQAV--PEADYVEVEGAPHGLLWTHADEVNAALKTFL 277 (279)
T ss_dssp SSSCTTTTHHHHHHHC--TTSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHhC--CCeeEEEeCCCCccchhcCHHHHHHHHHHHh
Confidence 99998877 8888887 6899999999999999 99999999988763
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=227.27 Aligned_cols=239 Identities=14% Similarity=0.070 Sum_probs=151.9
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHH-HhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFR-ARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~-~~~~~~~~~~ 135 (308)
.+++|||+||++++.. .|+.+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+. .+ +++
T Consensus 9 ~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~-----~~~ 82 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDE-----KVV 82 (264)
T ss_dssp CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTC-----CEE
T ss_pred CCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCC-----CeE
Confidence 4788999999997776 6788999998889999999999999998755444689999999999999884 34 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh--hCCCcccccCCCCCC-CcccccHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW--LVPTWRVVPTRGSLP-MVSFKEEWK 212 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 212 (308)
|+||||||.+++.+|.++|++|+++|++++...... ................ ............... .........
T Consensus 83 lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 2wfl_A 83 LLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPN-HSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQF 161 (264)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTT-SCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHH
T ss_pred EEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCC-cchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHH
Confidence 999999999999999999999999999997432111 1111111111110000 000000000000000 000011111
Q ss_pred HHHHhhCCCCCCCcchHHHHHHHHH----HHHHhh--hhcC---CCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcE
Q 035721 213 RKLALSSPRRPVARPRAATALELLR----VSRDLQ--GRFE---EVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTL 283 (308)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~---~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 283 (308)
....... ............... ....+. ..+. ..++|+++|+|++|.+++++.++.+.+.+ +++++
T Consensus 162 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--p~~~~ 236 (264)
T 2wfl_A 162 MALKMFQ---NCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV--GADKV 236 (264)
T ss_dssp HHHHTST---TSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH--CCSEE
T ss_pred HHHHHhc---CCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC--CCceE
Confidence 1000000 000000000000000 000000 1111 13689999999999999999999999998 68999
Q ss_pred EEecCCccccc-CCchhhHHHhhhc
Q 035721 284 SIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 284 ~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++++++||+++ ++|+++++.|.++
T Consensus 237 ~~i~~~gH~~~~e~P~~~~~~l~~f 261 (264)
T 2wfl_A 237 KEIKEADHMGMLSQPREVCKCLLDI 261 (264)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred EEeCCCCCchhhcCHHHHHHHHHHH
Confidence 99999999999 9999999998765
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=224.47 Aligned_cols=257 Identities=12% Similarity=0.008 Sum_probs=173.0
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
+..++ ..+|.+++|..+++ +|+|||+||++++.. .|..+++.|..+||+|+++|+||||.|+.+.. .++++
T Consensus 10 ~~~~~-~~~g~~l~~~~~g~------~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~-~~~~~ 80 (309)
T 3u1t_A 10 AKRTV-EVEGATIAYVDEGS------GQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI-EYRLQ 80 (309)
T ss_dssp CCEEE-EETTEEEEEEEEEC------SSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSS-CCCHH
T ss_pred cceEE-EECCeEEEEEEcCC------CCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCc-ccCHH
Confidence 33344 45889999988764 468999999998887 66888998777899999999999999988654 36899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh-hhhHHHhhhhC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL-EHLLFTVAWLV 190 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 190 (308)
++++|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|++++.............. ...........
T Consensus 81 ~~~~~~~~~~~~~~~~-----~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
T 3u1t_A 81 DHVAYMDGFIDALGLD-----DMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLR 155 (309)
T ss_dssp HHHHHHHHHHHHHTCC-----SEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCC-----ceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHh
Confidence 9999999999998765 99999999999999999999999999999999875543211111111 11111111110
Q ss_pred CC-cccc--cCCC--------CC-CCcccccHHHHHHHhhCCCCCCCcchHHHHHHH-------------HHHHHHhhhh
Q 035721 191 PT-WRVV--PTRG--------SL-PMVSFKEEWKRKLALSSPRRPVARPRAATALEL-------------LRVSRDLQGR 245 (308)
Q Consensus 191 ~~-~~~~--~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 245 (308)
.. .... .... .. ....+ .......+....... ......... .....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T 3u1t_A 156 TADVGEKMVLDGNFFVETILPEMGVVRSL-SEAEMAAYRAPFPTR---QSRLPTLQWPREVPIGGEPAFAEAEVLKNGEW 231 (309)
T ss_dssp STTHHHHHHTTTCHHHHTHHHHTSCSSCC-CHHHHHHHHTTCCST---GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH
T ss_pred ccchhhhhccccceehhhhcccccccccC-CHHHHHHHHHhcCCc---cccchHHHHHHHhccccccchhhhhhhhhhhh
Confidence 00 0000 0000 00 00011 111111111111110 011111111 1111244455
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++++|++|.+++++.++.+.+.+ ++.++++++++||+++ ++|+++.+.|.+++
T Consensus 232 l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 293 (309)
T 3u1t_A 232 LMASPIPKLLFHAEPGALAPKPVVDYLSENV--PNLEVRFVGAGTHFLQEDHPHLIGQGIADWL 293 (309)
T ss_dssp HHHCCSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCCCCCHHHHHHHHhhC--CCCEEEEecCCcccchhhCHHHHHHHHHHHH
Confidence 6788999999999999999999999999998 6788999999999999 99999999887763
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=221.34 Aligned_cols=251 Identities=12% Similarity=-0.006 Sum_probs=158.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
+.+.+|.+++|..+.+..+ +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.+.. .++++++++
T Consensus 8 ~~~~~g~~l~y~~~~~G~~---~p~vvllHG~~~~~~-~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~-~~~~~~~a~ 81 (276)
T 2wj6_A 8 ETLVFDNKLSYIDNQRDTD---GPAILLLPGWCHDHR-VYKYLIQELDA-DFRVIVPNWRGHGLSPSEVP-DFGYQEQVK 81 (276)
T ss_dssp EEEETTEEEEEEECCCCCS---SCEEEEECCTTCCGG-GGHHHHHHHTT-TSCEEEECCTTCSSSCCCCC-CCCHHHHHH
T ss_pred EEeeCCeEEEEEEecCCCC---CCeEEEECCCCCcHH-HHHHHHHHHhc-CCEEEEeCCCCCCCCCCCCC-CCCHHHHHH
Confidence 3456899999988721122 578999999998887 67889999976 59999999999999987643 368999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
|+.++++.++.+ +++++||||||.+|+.+|.++ |++|+++|++++...... ...... ...... ...+.
T Consensus 82 dl~~ll~~l~~~-----~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~----~~~~~~-~~~~~~-~~~~~ 150 (276)
T 2wj6_A 82 DALEILDQLGVE-----TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPK----PDFAKS-LTLLKD-PERWR 150 (276)
T ss_dssp HHHHHHHHHTCC-----SEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCC----HHHHHH-HHHHHC-TTTHH
T ss_pred HHHHHHHHhCCC-----ceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCC----chHHHH-hhhccC-cchHH
Confidence 999999999877 999999999999999999999 999999999987532110 000000 000000 00000
Q ss_pred c---ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH-H---HHHhhhhcCCCCcceEEEeeCCCcccC--
Q 035721 195 V---VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR-V---SRDLQGRFEEVEVPMLICHGGDDVVCD-- 265 (308)
Q Consensus 195 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~~P~l~i~g~~D~~~~-- 265 (308)
. .... .+... ................ .............. . .......+.++++|+++++|..|...+
T Consensus 151 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~ 227 (276)
T 2wj6_A 151 EGTHGLFD-VWLDG-HDEKRVRHHLLEEMAD-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEY 227 (276)
T ss_dssp HHHHHHHH-HHHTT-BCCHHHHHHHHTTTTT-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHH
T ss_pred HHHHHHHH-Hhhcc-cchHHHHHHHHHHhhh-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhH
Confidence 0 0000 00000 0011111111111111 00001111111000 0 001123567889999998864332222
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
....+.+.+.+ +++++++++++||+++ |+|+++++.|.+++
T Consensus 228 ~~~~~~~~~~~--p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl 269 (276)
T 2wj6_A 228 EKINSDFAEQH--PWFSYAKLGGPTHFPAIDVPDRAAVHIREFA 269 (276)
T ss_dssp HHHHHHHHHHC--TTEEEEECCCSSSCHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhC--CCeEEEEeCCCCCcccccCHHHHHHHHHHHH
Confidence 23456677777 6899999999999999 99999999988763
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=217.63 Aligned_cols=225 Identities=16% Similarity=0.197 Sum_probs=150.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|||+||++++.. .|..+++.|.++||+|+++|+||||.|..... .++++++++|+.++++.+... +..+++|+
T Consensus 16 ~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~-~~~~~~~~~d~~~~~~~l~~~--~~~~~~lv 91 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELV-HTGPDDWWQDVMNGYEFLKNK--GYEKIAVA 91 (247)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHT-TCCHHHHHHHHHHHHHHHHHH--TCCCEEEE
T ss_pred CcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHhc-CCCHHHHHHHHHHHHHHHHHc--CCCeEEEE
Confidence 467999999998887 67889999988899999999999997643322 257888888887777766554 44599999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
||||||.+|+.+|.++| |+++|+++++...... ................ .. .. ..........
T Consensus 92 G~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~----~~-----~~~~~~~~~~ 154 (247)
T 1tqh_A 92 GLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSE---ETMYEGVLEYAREYKK---RE----GK-----SEEQIEQEME 154 (247)
T ss_dssp EETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCH---HHHHHHHHHHHHHHHH---HH----TC-----CHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcc---hhhhHHHHHHHHHhhc---cc----cc-----chHHHHhhhh
Confidence 99999999999999998 9999987664321100 0000000000000000 00 00 0001111110
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CC
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 296 (308)
... .. ..........+ ..+..+.+.++++|+|+|+|++|.++|++.++.+++.+++.++++++++++||+++ ++
T Consensus 155 ~~~-~~-~~~~~~~~~~~---~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 229 (247)
T 1tqh_A 155 KFK-QT-PMKTLKALQEL---IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQ 229 (247)
T ss_dssp HHT-TS-CCTTHHHHHHH---HHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGST
T ss_pred ccc-CC-CHHHHHHHHHH---HHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCc
Confidence 000 00 01112111111 13455678899999999999999999999999999998543479999999999998 75
Q ss_pred -chhhHHHhhhcC
Q 035721 297 -PEENVELVFGEM 308 (308)
Q Consensus 297 -~~~~~~~i~~~i 308 (308)
|+++++.+.+++
T Consensus 230 ~~~~~~~~i~~Fl 242 (247)
T 1tqh_A 230 EKDQLHEDIYAFL 242 (247)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 689988887753
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=230.65 Aligned_cols=253 Identities=19% Similarity=0.243 Sum_probs=161.3
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
+...+|.+++|..+++.. .+++|||+||++++...+|..+. .+.++||+|+++|+||||.|+.+....++++++++
T Consensus 9 ~~~~~g~~l~~~~~g~~~---~~~~vvllHG~~~~~~~~~~~~~-~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 84 (293)
T 1mtz_A 9 YAKVNGIYIYYKLCKAPE---EKAKLMTMHGGPGMSHDYLLSLR-DMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVE 84 (293)
T ss_dssp EEEETTEEEEEEEECCSS---CSEEEEEECCTTTCCSGGGGGGG-GGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHH
T ss_pred EEEECCEEEEEEEECCCC---CCCeEEEEeCCCCcchhHHHHHH-HHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHH
Confidence 345678999999887632 24789999998666544555554 45577899999999999999876533368899999
Q ss_pred HHHHHHHHH-HHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 116 DAISFFDSF-RARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 116 d~~~~l~~~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
|+.++++.+ +.+ +++|+||||||.+|+.+|.++|++|+++|++++...... ..... .......+...
T Consensus 85 dl~~~~~~l~~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~-~~~~~~~~~~~ 152 (293)
T 1mtz_A 85 EAEALRSKLFGNE-----KVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPL------TVKEM-NRLIDELPAKY 152 (293)
T ss_dssp HHHHHHHHHHTTC-----CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHH------HHHHH-HHHHHTSCHHH
T ss_pred HHHHHHHHhcCCC-----cEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHH------HHHHH-HHHHHhcCHHH
Confidence 999999999 765 999999999999999999999999999999998653210 00000 00000000000
Q ss_pred c-----ccCCCCCCCcccccHHHHHHHhhCCCC-CCCcchHHHHHH-H-----HHH--------------HHHhhhhcCC
Q 035721 195 V-----VPTRGSLPMVSFKEEWKRKLALSSPRR-PVARPRAATALE-L-----LRV--------------SRDLQGRFEE 248 (308)
Q Consensus 195 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-----~~~--------------~~~~~~~~~~ 248 (308)
. ...........+.. ............ ............ . ... ..+..+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 231 (293)
T 1mtz_A 153 RDAIKKYGSSGSYENPEYQE-AVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISA 231 (293)
T ss_dssp HHHHHHHHHHTCTTCHHHHH-HHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGG
T ss_pred HHHHHHhhccCCcChHHHHH-HHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhcc
Confidence 0 00000000000000 000000000000 000000100000 0 000 0112345677
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|+++++|++| .++++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 232 i~~P~lii~G~~D-~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 289 (293)
T 1mtz_A 232 IKIPTLITVGEYD-EVTPNVARVIHEKI--AGSELHVFRDCSHLTMWEDREGYNKLLSDFI 289 (293)
T ss_dssp CCSCEEEEEETTC-SSCHHHHHHHHHHS--TTCEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred CCCCEEEEeeCCC-CCCHHHHHHHHHhC--CCceEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 8999999999999 67788888998888 6799999999999999 99999999887753
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=227.00 Aligned_cols=243 Identities=15% Similarity=0.135 Sum_probs=161.9
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
.+...+|.+++|...+. +++|||+||++ ++.. .|..+++.|.+. |+|+++|+||||.|+ +....++++
T Consensus 19 ~~~~~~g~~l~y~~~g~------g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~~~~~~~ 89 (296)
T 1j1i_A 19 RFVNAGGVETRYLEAGK------GQPVILIHGGGAGAESEG-NWRNVIPILARH-YRVIAMDMLGFGKTA-KPDIEYTQD 89 (296)
T ss_dssp EEEEETTEEEEEEEECC------SSEEEEECCCSTTCCHHH-HHTTTHHHHTTT-SEEEEECCTTSTTSC-CCSSCCCHH
T ss_pred eEEEECCEEEEEEecCC------CCeEEEECCCCCCcchHH-HHHHHHHHHhhc-CEEEEECCCCCCCCC-CCCCCCCHH
Confidence 34456899999987652 35799999987 4443 567888889776 999999999999998 444346889
Q ss_pred hHHHHHHHHHHHHHH-hcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch-------hhhhH
Q 035721 112 PVVEDAISFFDSFRA-RHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP-------LEHLL 183 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-------~~~~~ 183 (308)
++++|+.++++.+.. . +++|+||||||.+|+.+|.++|++|+++|++++............. .....
T Consensus 90 ~~~~dl~~~l~~l~~~~-----~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 90 RRIRHLHDFIKAMNFDG-----KVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp HHHHHHHHHHHHSCCSS-----CEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred HHHHHHHHHHHhcCCCC-----CeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 999999999988765 4 9999999999999999999999999999999986532111000000 00000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH------HhhhhcCCCCcceEEEe
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR------DLQGRFEEVEVPMLICH 257 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~P~l~i~ 257 (308)
......... . . .............. ................. .....+.++++|+++++
T Consensus 165 ~~~~~~~~~------~-~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~ 229 (296)
T 1j1i_A 165 HLVKALTND------G-F----KIDDAMINSRYTYA----TDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQ 229 (296)
T ss_dssp HHHHHHSCT------T-C----CCCHHHHHHHHHHH----HSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEE
T ss_pred HHHHHhccC------c-c----cccHHHHHHHHHHh----hCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEE
Confidence 000000000 0 0 00000000000000 00000011111111100 12235678999999999
Q ss_pred eCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 258 GGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|++|.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 230 G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 279 (296)
T 1j1i_A 230 GKDDKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHPEDFANATLSFL 279 (296)
T ss_dssp ETTCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred ECCCcccCHHHHHHHHHHC--CCCEEEEECCCCCCchhcCHHHHHHHHHHHH
Confidence 9999999999999999988 6789999999999999 99999999887753
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=221.68 Aligned_cols=239 Identities=17% Similarity=0.210 Sum_probs=173.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP 112 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 112 (308)
..+.+.+|.+++|..++|.+ .++|+||++||++++. ..+|..+++.|.++||.|+++|+||+|.|...... +++.+
T Consensus 24 ~~~~~~~g~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~ 100 (270)
T 3pfb_A 24 TITLERDGLQLVGTREEPFG--EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFEN-MTVLN 100 (270)
T ss_dssp EEEEEETTEEEEEEEEECSS--SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG-CCHHH
T ss_pred EEEeccCCEEEEEEEEcCCC--CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCc-cCHHH
Confidence 34456789999999998864 3589999999999874 23678999999999999999999999999876544 58889
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
+++|+.++++++.... +..+++++|||+||.+++.++.++|++++++|+++|...... .........
T Consensus 101 ~~~d~~~~i~~l~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------~~~~~~~~~ 167 (270)
T 3pfb_A 101 EIEDANAILNYVKTDP-HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKG------------DALEGNTQG 167 (270)
T ss_dssp HHHHHHHHHHHHHTCT-TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHH------------HHHHTEETT
T ss_pred HHHhHHHHHHHHHhCc-CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccch------------hhhhhhhhc
Confidence 9999999999997643 334999999999999999999999999999999998654221 000000000
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHH
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 272 (308)
...... .... .... ............... .+....+.++++|+++++|++|.+++++.++.+
T Consensus 168 ~~~~~~--~~~~-~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 229 (270)
T 3pfb_A 168 VTYNPD--HIPD-RLPF--------------KDLTLGGFYLRIAQQ-LPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKY 229 (270)
T ss_dssp EECCTT--SCCS-EEEE--------------TTEEEEHHHHHHHHH-CCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHH
T ss_pred cccCcc--cccc-cccc--------------cccccchhHhhcccc-cCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHH
Confidence 000000 0000 0000 000000001111111 233455778999999999999999999999999
Q ss_pred HHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 273 YKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 273 ~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+.+ +++++++++++||.++ ++++++.+.|.++|
T Consensus 230 ~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 264 (270)
T 3pfb_A 230 DQIY--QNSTLHLIEGADHCFSDSYQKNAVNLTTDFL 264 (270)
T ss_dssp HHHC--SSEEEEEETTCCTTCCTHHHHHHHHHHHHHH
T ss_pred HHhC--CCCeEEEcCCCCcccCccchHHHHHHHHHHH
Confidence 9987 6799999999999999 88999999887763
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=224.22 Aligned_cols=245 Identities=18% Similarity=0.174 Sum_probs=160.2
Q ss_pred C--cEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHH-HHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 41 G--LRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTA-VLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 41 g--~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
| .+++|..+++ + .++|||+||++ ++.. .|..+. +.|.+. |+|+++|+||||.|+......+++++++
T Consensus 22 g~~~~l~y~~~g~--g---~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 94 (289)
T 1u2e_A 22 GKTLRIHFNDCGQ--G---DETVVLLHGSGPGATGWA-NFSRNIDPLVEAG-YRVILLDCPGWGKSDSVVNSGSRSDLNA 94 (289)
T ss_dssp TEEEEEEEEEECC--C---SSEEEEECCCSTTCCHHH-HTTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHH
T ss_pred CcEEEEEEeccCC--C---CceEEEECCCCcccchhH-HHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCCccccCHHHHH
Confidence 8 8999988764 1 23899999997 4433 456677 788765 9999999999999987654346788899
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC-C-chhhhhHHHhhhhCCC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-P-WPLEHLLFTVAWLVPT 192 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ 192 (308)
+|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++.......... . ........... .+.
T Consensus 95 ~~l~~~l~~l~~~-----~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 167 (289)
T 1u2e_A 95 RILKSVVDQLDIA-----KIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR--QPT 167 (289)
T ss_dssp HHHHHHHHHTTCC-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHH--SCC
T ss_pred HHHHHHHHHhCCC-----ceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHh--cch
Confidence 9999999887665 9999999999999999999999999999999986532211111 0 01111111100 000
Q ss_pred cc----cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH-------HhhhhcCCCCcceEEEeeCCC
Q 035721 193 WR----VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR-------DLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 193 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~g~~D 261 (308)
.. ..... ........+.......... .........+..... +....+.++++|+++|+|++|
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 240 (289)
T 1u2e_A 168 IENLKLMMDIF-VFDTSDLTDALFEARLNNM------LSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRND 240 (289)
T ss_dssp HHHHHHHHHTT-SSCTTSCCHHHHHHHHHHH------HHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHHHHHh-hcCcccCCHHHHHHHHHHh------hcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCC
Confidence 00 00000 0000000001000000000 000000111111100 123457788999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 241 ~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 286 (289)
T 1u2e_A 241 RFVPMDAGLRLLSGI--AGSELHIFRDCGHWAQWEHADAFNQLVLNFL 286 (289)
T ss_dssp SSSCTHHHHHHHHHS--TTCEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHhhC--CCcEEEEeCCCCCchhhcCHHHHHHHHHHHh
Confidence 999999999999988 6799999999999999 99999999887753
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=232.65 Aligned_cols=246 Identities=16% Similarity=0.177 Sum_probs=158.3
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
+.+++|...|. .++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+....++++++++|+.++
T Consensus 5 ~~~~~y~~~G~------g~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~ 76 (269)
T 2xmz_A 5 HYKFYEANVET------NQVLVFLHGFLSDSR-TYHNHIEKFTDN-YHVITIDLPGHGEDQSSMDETWNFDYITTLLDRI 76 (269)
T ss_dssp SEEEECCSSCC------SEEEEEECCTTCCGG-GGTTTHHHHHTT-SEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHH
T ss_pred cceEEEEEcCC------CCeEEEEcCCCCcHH-HHHHHHHHHhhc-CeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHH
Confidence 55677765432 346999999999887 667899999875 9999999999999987654246899999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh--hHHHhhhh----CCCcc
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH--LLFTVAWL----VPTWR 194 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~ 194 (308)
++.+... +++++||||||.+|+.+|.++|++|+++|++++........ ...... .......+ .....
T Consensus 77 l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (269)
T 2xmz_A 77 LDKYKDK-----SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEA--NQLERRLVDDARAKVLDIAGIELFV 149 (269)
T ss_dssp HGGGTTS-----EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHH--HHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHcCCC-----cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCch--hHHHHhhhhhHHHHhhccccHHHHH
Confidence 9988765 99999999999999999999999999999999865432110 000000 00000000 00000
Q ss_pred cccCCCC-CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-----HHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 195 VVPTRGS-LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-----RDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 195 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
....... +......+............. .. ........... .+..+.+.++++|+++|+|++|.+++++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 225 (269)
T 2xmz_A 150 NDWEKLPLFQSQLELPVEIQHQIRQQRLS-QS---PHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIA 225 (269)
T ss_dssp HHHTTSGGGGGGGGSCHHHHHHHHHHHHT-SC---HHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHH
T ss_pred HHHHhCccccccccCCHHHHHHHHHHHhc-cC---cHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHH
Confidence 0000000 000000011111111000000 00 00011111110 12234577889999999999999998776
Q ss_pred HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 269 VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+ +.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 226 ~~-~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 263 (269)
T 2xmz_A 226 KK-MANLI--PNSKCKLISATGHTIHVEDSDEFDTMILGFL 263 (269)
T ss_dssp HH-HHHHS--TTEEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred HH-HHhhC--CCcEEEEeCCCCCChhhcCHHHHHHHHHHHH
Confidence 55 77777 6899999999999999 99999999887753
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=222.03 Aligned_cols=237 Identities=14% Similarity=-0.001 Sum_probs=151.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHH-HhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFR-ARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~-~~~~~~~~~~l 136 (308)
+++|||+||++++.. .|+.+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+. .+ +++|
T Consensus 4 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~-----~~~l 77 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADE-----KVIL 77 (273)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSS-----CEEE
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCC-----CEEE
Confidence 578999999997765 6788999998889999999999999998755444689999999999998875 24 9999
Q ss_pred EEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh--hCCCcccccCCCCC-CCcccccHHHH
Q 035721 137 YSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW--LVPTWRVVPTRGSL-PMVSFKEEWKR 213 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 213 (308)
+||||||.+++.+|.++|++|+++|++++....... ............... .............. ...........
T Consensus 78 vGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (273)
T 1xkl_A 78 VGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVH-NSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFL 156 (273)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSS-CTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHH
T ss_pred EecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCC-cHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHH
Confidence 999999999999999999999999999975321111 111101111110000 00000000000000 00001111111
Q ss_pred HHHhhCCCCCCCcchHHHHHHH-------HHHHHHhhhhc---CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcE
Q 035721 214 KLALSSPRRPVARPRAATALEL-------LRVSRDLQGRF---EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTL 283 (308)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 283 (308)
...... ............. ...... ...+ ...++|+++|+|++|.++|++.++.+.+.+ +++++
T Consensus 157 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--p~~~~ 230 (273)
T 1xkl_A 157 AHKLYQ---LCSPEDLALASSLVRPSSLFMEDLSK-AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GVTEA 230 (273)
T ss_dssp HHHTST---TSCHHHHHHHHHHCCCBCCCHHHHHH-CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CCSEE
T ss_pred HHHhhc---cCCHHHHHHHHHhcCCCchhhhhhhc-ccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC--CCCeE
Confidence 100000 0000000000000 000000 0111 114789999999999999999999999998 67899
Q ss_pred EEecCCccccc-CCchhhHHHhhhc
Q 035721 284 SIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 284 ~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++++++||+++ ++|+++++.|.++
T Consensus 231 ~~i~~aGH~~~~e~P~~~~~~i~~f 255 (273)
T 1xkl_A 231 IEIKGADHMAMLCEPQKLCASLLEI 255 (273)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred EEeCCCCCCchhcCHHHHHHHHHHH
Confidence 99999999999 9999999988775
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=220.10 Aligned_cols=249 Identities=14% Similarity=0.071 Sum_probs=168.0
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
.++.+.+|.+++|..+++ +|+||++||++++.. .|..+++.|. +||+|+++|+||||.|+... .++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~-~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~--~~~~~~~ 74 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGS------GPPVVLVGGALSTRA-GGAPLAERLA-PHFTVICYDRRGRGDSGDTP--PYAVERE 74 (262)
T ss_dssp CEEECTTSCEEEEEEEEC------SSEEEEECCTTCCGG-GGHHHHHHHT-TTSEEEEECCTTSTTCCCCS--SCCHHHH
T ss_pred heEEcCCCcEEEEEEcCC------CCcEEEECCCCcChH-HHHHHHHHHh-cCcEEEEEecCCCcCCCCCC--CCCHHHH
Confidence 467788999999998763 467999999998887 6689999998 78999999999999998875 3589999
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC--CchhhhhHHHhhhhCC
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP--PWPLEHLLFTVAWLVP 191 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 191 (308)
++|+.++++.++ . +++++|||+||.+++.+|.++| +|+++|++++.......... ................
T Consensus 75 ~~~~~~~~~~l~-~-----~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (262)
T 3r0v_A 75 IEDLAAIIDAAG-G-----AAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRR 147 (262)
T ss_dssp HHHHHHHHHHTT-S-----CEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhcC-C-----CeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccch
Confidence 999999999887 5 9999999999999999999999 99999999987665433221 1111111111100000
Q ss_pred CcccccCCCCCCCc-ccccHHHHHHHhhCCCCCCC----cchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 192 TWRVVPTRGSLPMV-SFKEEWKRKLALSSPRRPVA----RPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 192 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
..... .+... ................ ... ....................+.++++|+++++|++|.++++
T Consensus 148 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 222 (262)
T 3r0v_A 148 GDAVT----YFMTEGVGVPPDLVAQMQQAPM-WPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIR 222 (262)
T ss_dssp HHHHH----HHHHHTSCCCHHHHHHHHTSTT-HHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHH
T ss_pred hhHHH----HHhhcccCCCHHHHHHHHhhhc-ccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCH
Confidence 00000 00000 0001111111111100 000 00000000000000112355778899999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
+..+.+.+.+ +++++++++++|| +++|+++.+.|.+++
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~~~gH--~~~p~~~~~~i~~fl 260 (262)
T 3r0v_A 223 HTAQELADTI--PNARYVTLENQTH--TVAPDAIAPVLVEFF 260 (262)
T ss_dssp HHHHHHHHHS--TTEEEEECCCSSS--SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCCeEEEecCCCc--ccCHHHHHHHHHHHH
Confidence 9999999998 6789999999999 568899988887763
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=228.10 Aligned_cols=256 Identities=18% Similarity=0.188 Sum_probs=170.0
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcchH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNPV 113 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 113 (308)
.+.+.+|.+++|...+. +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+... ...++++++
T Consensus 6 ~~~~~~~~~~~y~~~g~------~~~vv~~HG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 77 (278)
T 3oos_A 6 NIIKTPRGKFEYFLKGE------GPPLCVTHLYSEYND-NGNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSEYSMTET 77 (278)
T ss_dssp EEEEETTEEEEEEEECS------SSEEEECCSSEECCT-TCCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGGGSHHHH
T ss_pred CcEecCCceEEEEecCC------CCeEEEEcCCCcchH-HHHHHHHHhhc-CceEEEEcCCCCCCCCCCCCcccCcHHHH
Confidence 34455777999987652 568999999998887 46788888877 8999999999999998764 234588999
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC-------CchhhhhHHHh
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHLLFTV 186 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-------~~~~~~~~~~~ 186 (308)
++|+.++++.++.+ +++++|||+||.+++.+|.++|++|+++|++++.......... ...........
T Consensus 78 ~~~~~~~~~~l~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 78 IKDLEAIREALYIN-----KWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp HHHHHHHHHHTTCS-----CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-----eEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 99999999988665 9999999999999999999999999999999997652111100 00111111111
Q ss_pred hhhCCCcccccCC----CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH----HHHHhhhhcCCCCcceEEEee
Q 035721 187 AWLVPTWRVVPTR----GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR----VSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 187 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g 258 (308)
............. .........++............ ..........+. ...+....+.++++|+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 229 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNS---GKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCG 229 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCC---CEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEE
T ss_pred HhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhcccc---chhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEe
Confidence 1111100000000 00000000001111111111111 111111111111 011234557789999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.+++++.++.+.+.+ +++++++++++||+++ ++|+++.+.|.++|
T Consensus 230 ~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 230 KHDVQCPYIFSCEIANLI--PNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TTCSSSCHHHHHHHHHHS--TTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred ccCCCCCHHHHHHHHhhC--CCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 999999999999999998 6899999999999999 99999999998875
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=225.40 Aligned_cols=253 Identities=15% Similarity=0.119 Sum_probs=165.4
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
.++.|....+.+ .++|+|||+||++++.. .|..+++.|.++||+|+++|+||+|.|+......++++++++|+.+++
T Consensus 32 ~~~~~~~~~~~~--~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 108 (315)
T 4f0j_A 32 LSMAYLDVAPKK--ANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALL 108 (315)
T ss_dssp EEEEEEEECCSS--CCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHH
T ss_pred eeEEEeecCCCC--CCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHH
Confidence 455555544432 45899999999998887 678999999999999999999999999887665578999999999999
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhhhhCC----Cc-c
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVAWLVP----TW-R 194 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~-~ 194 (308)
+.+..+ +++++|||+||.+++.++.++|++|+++|++++........ .................. .. .
T Consensus 109 ~~~~~~-----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
T 4f0j_A 109 ERLGVA-----RASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQ 183 (315)
T ss_dssp HHTTCS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHhCCC-----ceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHH
Confidence 887665 99999999999999999999999999999999854321100 000011111100000000 00 0
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH---HHHHHhhhhcCCCCcceEEEeeCCCcccC------
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL---RVSRDLQGRFEEVEVPMLICHGGDDVVCD------ 265 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~------ 265 (308)
..... ....... ........... ............... ....+....+.++++|+++++|++|.++|
T Consensus 184 ~~~~~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~ 259 (315)
T 4f0j_A 184 ATYYA-GEWRPEF--DRWVQMQAGMY-RGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAP 259 (315)
T ss_dssp HHTST-TCCCGGG--HHHHHHHHHHT-TSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSC
T ss_pred HHHhc-cccCCch--HHHHHHHHHHh-hccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccccccc
Confidence 00000 0000000 01111111100 000000000000000 01122344578899999999999999999
Q ss_pred ----------hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 266 ----------PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 266 ----------~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+..+.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 311 (315)
T 4f0j_A 260 AELKARLGNYAQLGKDAARRI--PQATLVEFPDLGHTPQIQAPERFHQALLEGL 311 (315)
T ss_dssp HHHHTTSCCHHHHHHHHHHHS--TTEEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred cccccccccchhhhhHHHhhc--CCceEEEeCCCCcchhhhCHHHHHHHHHHHh
Confidence 77788888887 6899999999999999 99999999888764
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=226.39 Aligned_cols=251 Identities=15% Similarity=0.041 Sum_probs=165.6
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
..+.+.+|.+++|..++. +|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.+.. .++++++
T Consensus 12 ~~~~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~ 82 (301)
T 3kda_A 12 SAYREVDGVKLHYVKGGQ------GPLVMLVHGFGQTWY-EWHQLMPELAKR-FTVIAPDLPGLGQSEPPKT-GYSGEQV 82 (301)
T ss_dssp EEEEEETTEEEEEEEEES------SSEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTCCCCSS-CSSHHHH
T ss_pred eEEEeeCCeEEEEEEcCC------CCEEEEECCCCcchh-HHHHHHHHHHhc-CeEEEEcCCCCCCCCCCCC-CccHHHH
Confidence 345567899999998872 568999999998887 668899999888 9999999999999987733 3689999
Q ss_pred HHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC---------CchhhhhH
Q 035721 114 VEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP---------PWPLEHLL 183 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~---------~~~~~~~~ 183 (308)
++|+.++++.++.. + ++++||||||.+++.+|.++|++|+++|++++.......... ........
T Consensus 83 ~~~l~~~l~~l~~~-----~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (301)
T 3kda_A 83 AVYLHKLARQFSPD-----RPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFF 157 (301)
T ss_dssp HHHHHHHHHHHCSS-----SCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHH
T ss_pred HHHHHHHHHHcCCC-----ccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHh
Confidence 99999999998765 6 999999999999999999999999999999986432211100 00000000
Q ss_pred H----HhhhhCCC-------cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH-------HHHhhhh
Q 035721 184 F----TVAWLVPT-------WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV-------SRDLQGR 245 (308)
Q Consensus 184 ~----~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 245 (308)
. ........ ..... ...............+.... ............+.. .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T 3kda_A 158 AADDRLAETLIAGKERFFLEHFIKS---HASNTEVFSERLLDLYARSY---AKPHSLNASFEYYRALNESVRQNAELAKT 231 (301)
T ss_dssp HCSTTHHHHHHTTCHHHHHHHHHHH---TCSSGGGSCHHHHHHHHHHH---TSHHHHHHHHHHHHTHHHHHHHHHHHTTS
T ss_pred hcCcchHHHHhccchHHHHHHHHHh---ccCCcccCCHHHHHHHHHHh---ccccccchHHHHHHhhccchhhcccchhh
Confidence 0 00000000 00000 00000000111111111000 000011111111111 1122233
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++++|++| +++...+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 232 l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l 291 (301)
T 3kda_A 232 RLQMPTMTLAGGGAGG--MGTFQLEQMKAYA--EDVEGHVLPGCGHWLPEECAAPMNRLVIDFL 291 (301)
T ss_dssp CBCSCEEEEEECSTTS--CTTHHHHHHHTTB--SSEEEEEETTCCSCHHHHTHHHHHHHHHHHH
T ss_pred ccccCcceEEEecCCC--CChhHHHHHHhhc--ccCeEEEcCCCCcCchhhCHHHHHHHHHHHH
Confidence 4489999999999999 6777888887777 6899999999999999 99999999988753
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=222.33 Aligned_cols=237 Identities=14% Similarity=0.078 Sum_probs=151.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHH-HhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFR-ARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~-~~~~~~~~~~l 136 (308)
+++|||+||++.+.. .|+.+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+. .+ +++|
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~-----~~~l 76 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGE-----KVIL 76 (257)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTC-----CEEE
T ss_pred CCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccC-----CeEE
Confidence 568999999997765 6789999999889999999999999998754444689999999999998874 34 9999
Q ss_pred EEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCC-CcccccHHHHHH
Q 035721 137 YSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLP-MVSFKEEWKRKL 215 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 215 (308)
+||||||.+++.+|.++|++|+++|++++...... ............................... ............
T Consensus 77 vGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T 3c6x_A 77 VGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTE-HCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRE 155 (257)
T ss_dssp EEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSS-SCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHH
T ss_pred EEECcchHHHHHHHHhCchhhheEEEEecccCCCC-CcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHH
Confidence 99999999999999999999999999998532111 1111111111110000000000000000000 000011111100
Q ss_pred HhhCCCCCCCcchHHHHHHH-------HHHHHHhhhhc--C-CCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEE
Q 035721 216 ALSSPRRPVARPRAATALEL-------LRVSRDLQGRF--E-EVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~-~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (308)
.... ............. ....... ..+ . ..++|+++|+|++|.++|++.++.+.+.+ +++++++
T Consensus 156 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--~~~~~~~ 229 (257)
T 3c6x_A 156 NLYT---LCGPEEYELAKMLTRKGSLFQNILAKR-PFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYK 229 (257)
T ss_dssp HTST---TSCHHHHHHHHHHCCCBCCCHHHHHHS-CCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSEEEE
T ss_pred HHhc---CCCHHHHHHHHHhcCCCccchhhhccc-cccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC--CCCeEEE
Confidence 0000 0000000000000 0000000 111 1 12689999999999999999999999998 6899999
Q ss_pred ecCCccccc-CCchhhHHHhhhc
Q 035721 286 YPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 286 ~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++++||+++ ++|+++++.|.++
T Consensus 230 i~~~gH~~~~e~P~~~~~~l~~f 252 (257)
T 3c6x_A 230 VEGGDHKLQLTKTKEIAEILQEV 252 (257)
T ss_dssp CCSCCSCHHHHSHHHHHHHHHHH
T ss_pred eCCCCCCcccCCHHHHHHHHHHH
Confidence 999999999 9999999998875
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=220.70 Aligned_cols=246 Identities=13% Similarity=0.021 Sum_probs=164.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
+.+|.+++|..+++++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+.. .++++++++|+
T Consensus 5 ~~~g~~l~~~~~g~~~----~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~ 77 (264)
T 3ibt_A 5 NVNGTLMTYSESGDPH----APTLFLLSGWCQDHR-LFKNLAPLLARD-FHVICPDWRGHDAKQTDSG-DFDSQTLAQDL 77 (264)
T ss_dssp EETTEECCEEEESCSS----SCEEEEECCTTCCGG-GGTTHHHHHTTT-SEEEEECCTTCSTTCCCCS-CCCHHHHHHHH
T ss_pred eeCCeEEEEEEeCCCC----CCeEEEEcCCCCcHh-HHHHHHHHHHhc-CcEEEEccccCCCCCCCcc-ccCHHHHHHHH
Confidence 3478899998887632 678999999999887 668899999664 9999999999999998633 36899999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccc
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVV 196 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (308)
.++++.++.. +++++|||+||.+++.+|.++ |++|+++|++++..... . .....+..........
T Consensus 78 ~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~-----~----~~~~~~~~~~~~~~~~ 143 (264)
T 3ibt_A 78 LAFIDAKGIR-----DFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPH-----P----GFWQQLAEGQHPTEYV 143 (264)
T ss_dssp HHHHHHTTCC-----SEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCC-----H----HHHHHHHHTTCTTTHH
T ss_pred HHHHHhcCCC-----ceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcC-----h----hhcchhhcccChhhHH
Confidence 9999988665 999999999999999999999 99999999999876110 0 0111111100000000
Q ss_pred cC-C---CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH----HhhhhcCCCCcceEEEee--CCCcccCh
Q 035721 197 PT-R---GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR----DLQGRFEEVEVPMLICHG--GDDVVCDP 266 (308)
Q Consensus 197 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~P~l~i~g--~~D~~~~~ 266 (308)
.. . ..+... ...+............ .....+........... +....+.++++|+++++| +.|...++
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~ 221 (264)
T 3ibt_A 144 AGRQSFFDEWAET-TDNADVLNHLRNEMPW-FHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYR 221 (264)
T ss_dssp HHHHHHHHHHHTT-CCCHHHHHHHHHTGGG-SCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHH
T ss_pred HHHHHHHHHhccc-CCcHHHHHHHHHhhhh-ccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhH
Confidence 00 0 000000 0111111122111111 11111111111111111 122567889999999965 55555556
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 222 ~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 262 (264)
T 3ibt_A 222 QLQLEFAAGH--SWFHPRHIPGRTHFPSLENPVAVAQAIREFL 262 (264)
T ss_dssp HHHHHHHHHC--TTEEEEECCCSSSCHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHHhC--CCceEEEcCCCCCcchhhCHHHHHHHHHHHH
Confidence 7778888877 6789999999999999 99999999998775
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=217.17 Aligned_cols=237 Identities=11% Similarity=0.033 Sum_probs=156.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHH-HhcCCCCCE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFR-ARHAPDLPA 134 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~-~~~~~~~~~ 134 (308)
.++|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+. .. ++
T Consensus 10 ~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~-----~~ 83 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANE-----KI 83 (267)
T ss_dssp CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTS-----CE
T ss_pred CCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCC-----CE
Confidence 45789999999998887 6689999999989999999999999999876655799999999999999883 44 99
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh----hhhCCC-cccccCCCCCCCccccc
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV----AWLVPT-WRVVPTRGSLPMVSFKE 209 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 209 (308)
+++|||+||.+++.+|.++|++|+++|++++....... ......... ...... .................
T Consensus 84 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 84 ILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNI-----DATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp EEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTB-----CHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred EEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcc-----hHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 99999999999999999999999999999986543211 111111111 000000 00000000000011111
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHHHH--------HH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC
Q 035721 210 EWKRKLALSSPRRPVARPRAATALELLR--------VS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279 (308)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 279 (308)
......... ................ .. ..........++|+++|+|++|.+++++..+.+.+.+ +
T Consensus 159 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~ 233 (267)
T 3sty_A 159 PKFLATNVY---HLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN--P 233 (267)
T ss_dssp HHHHHHHTS---TTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS--C
T ss_pred HHHHHHhhc---ccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC--C
Confidence 111111000 0000000000000000 00 0001111122699999999999999999999999998 6
Q ss_pred CCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 280 DKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++++++++||+++ ++|+++++.|.+++
T Consensus 234 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 263 (267)
T 3sty_A 234 PDEVKEIEGSDHVTMMSKPQQLFTTLLSIA 263 (267)
T ss_dssp CSEEEECTTCCSCHHHHSHHHHHHHHHHHH
T ss_pred CceEEEeCCCCccccccChHHHHHHHHHHH
Confidence 799999999999999 99999999887753
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=217.31 Aligned_cols=236 Identities=18% Similarity=0.246 Sum_probs=169.6
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
...+|.+++|.. + ++|+||++||++++.. .|..+++.|.++||.|+++|+||+|.|...... .+++++++|
T Consensus 26 ~~~~g~~~~~~~----g---~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d 96 (270)
T 3rm3_A 26 PVLSGAEPFYAE----N---GPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMER-TTFHDWVAS 96 (270)
T ss_dssp CCCTTCCCEEEC----C---SSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHT-CCHHHHHHH
T ss_pred cCCCCCcccccC----C---CCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeCCCCCCCCcccccc-CCHHHHHHH
Confidence 356787777752 2 3689999999998887 568999999999999999999999999764433 588999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh--hCCCcc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW--LVPTWR 194 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 194 (308)
+.++++++... ..+++++|||+||.+++.++.++|+ ++++|++++........ ..... ....+.
T Consensus 97 ~~~~i~~l~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~ 162 (270)
T 3rm3_A 97 VEEGYGWLKQR---CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIA----------AGMTGGGELPRYL 162 (270)
T ss_dssp HHHHHHHHHTT---CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHH----------HHSCC---CCSEE
T ss_pred HHHHHHHHHhh---CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccc----------cchhcchhHHHHH
Confidence 99999999831 2399999999999999999999999 99999999865432110 00000 000000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
..... ....... ...............+.....+....+.++++|+++++|++|.+++++.++.+.+
T Consensus 163 ~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~ 229 (270)
T 3rm3_A 163 DSIGS-DLKNPDV------------KELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQ 229 (270)
T ss_dssp ECCCC-CCSCTTC------------CCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHH
T ss_pred HHhCc-cccccch------------HhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHH
Confidence 00000 0000000 0011112233344444444456667788899999999999999999999999999
Q ss_pred HhcCCCCcEEEecCCccccc-CCc-hhhHHHhhhcC
Q 035721 275 RAASKDKTLSIYPGMWHQLI-GEP-EENVELVFGEM 308 (308)
Q Consensus 275 ~~~~~~~~~~~~~~~gH~~~-~~~-~~~~~~i~~~i 308 (308)
.+++.++++++++++||.++ +.+ +++.+.+.++|
T Consensus 230 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 265 (270)
T 3rm3_A 230 GISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFF 265 (270)
T ss_dssp HSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHH
T ss_pred hcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHH
Confidence 99654569999999999999 776 77888877653
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=229.62 Aligned_cols=256 Identities=15% Similarity=0.109 Sum_probs=170.2
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
+.+..+.+.+|.+++|..++ ++|+|||+||++++.. .|..+++.|.++||+|+++|+||+|.|+.+... +++
T Consensus 3 ~i~~~~~~~dG~~l~y~~~G------~gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~-~s~ 74 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDHG------TGVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTG-YDY 74 (456)
T ss_dssp EEEEEEETTEEEEEEEEEES------SSEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSC-CSH
T ss_pred eEeecccccCCeEEEEEEeC------CCCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC-CCH
Confidence 44556778899999998875 2578999999998887 567899999888999999999999999876543 589
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCCCCC---chhhhhHHHh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKFKPP---WPLEHLLFTV 186 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~ 186 (308)
+++++|+.++++++..+ +++++|||+||.+++.++.++ |++++++|++++........... ..........
T Consensus 75 ~~~a~dl~~~l~~l~~~-----~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (456)
T 3vdx_A 75 DTFAADLNTVLETLDLQ-----DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGI 149 (456)
T ss_dssp HHHHHHHHHHHHHHTCC-----SEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-----CeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHH
Confidence 99999999999998665 999999999999999998887 89999999999876532221111 0000000000
Q ss_pred ------------hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceE
Q 035721 187 ------------AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPML 254 (308)
Q Consensus 187 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 254 (308)
.......... . ...................... ........ ......+....+.++++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~d~~~~l~~i~~PvL 222 (456)
T 3vdx_A 150 VAAVKADRYAFYTGFFNDFYNL--D-ENLGTRISEEAVRNSWNTAASG-GFFAAAAA---PTTWYTDFRADIPRIDVPAL 222 (456)
T ss_dssp HHHHHHCHHHHHHHHHHHHTTT--T-TSBTTTBCHHHHHHHHHHHHTS-CTTHHHHG---GGGTTCCCTTTSTTCCSCCE
T ss_pred HHhhhccchHHHHHHHHHHhcc--c-ccccccccHHHHHHHhhhcccc-chhhhhhh---hhhhhhhHHHHhhhCCCCEE
Confidence 0000000000 0 0000001111111000000000 00000000 00000123355778999999
Q ss_pred EEeeCCCcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 255 ICHGGDDVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 255 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|++|.+++++ ..+.+.+.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 223 iI~G~~D~~vp~~~~~~~l~~~~--~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL 276 (456)
T 3vdx_A 223 ILHGTGDRTLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 276 (456)
T ss_dssp EEEETTCSSSCGGGTHHHHHHHC--TTSEEEEETTCCSCTTTTTHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCHHHHHHHHHHHC--CCceEEEeCCCCCcchhhCHHHHHHHHHHHH
Confidence 9999999999998 666777766 6899999999999999 99999998887653
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=226.83 Aligned_cols=237 Identities=15% Similarity=0.099 Sum_probs=163.3
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
+.+|.+++|...++ +|+|||+||++++.. .|..+.+.|.+ .||+|+++|+||||.|+.... ++++++++|
T Consensus 7 ~~~g~~l~y~~~g~------~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~ 77 (272)
T 3fsg_A 7 YLTRSNISYFSIGS------GTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP--STSDNVLET 77 (272)
T ss_dssp EECTTCCEEEEECC------SSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS--CSHHHHHHH
T ss_pred EecCCeEEEEEcCC------CCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC--CCHHHHHHH
Confidence 45888999988762 567999999998887 66788888877 699999999999999988766 689999999
Q ss_pred HHHHHHH-HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc
Q 035721 117 AISFFDS-FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV 195 (308)
Q Consensus 117 ~~~~l~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
+.++++. +... +++++|||+||.+|+.+|.++|++|+++|+++|................ .
T Consensus 78 ~~~~l~~~~~~~-----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-------------~ 139 (272)
T 3fsg_A 78 LIEAIEEIIGAR-----RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHIN-------------I 139 (272)
T ss_dssp HHHHHHHHHTTC-----CEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCC-------------E
T ss_pred HHHHHHHHhCCC-----cEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchh-------------h
Confidence 9999998 4444 9999999999999999999999999999999987543221110000000 0
Q ss_pred ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH------------HHHHH-------HHhhhhcCCCCcceEEE
Q 035721 196 VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE------------LLRVS-------RDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-------~~~~~~~~~i~~P~l~i 256 (308)
.. . .+......... ........ ............ ..... .+....+.++++|++++
T Consensus 140 ~~-~-~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 214 (272)
T 3fsg_A 140 LE-E-DINPVENKEYF-ADFLSMNV--IINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIM 214 (272)
T ss_dssp EC-S-CCCCCTTGGGH-HHHHHHCS--EESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEE
T ss_pred hh-h-hhhcccCHHHH-HHHHHHhc--cCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEE
Confidence 00 0 01111100000 00000000 000000000000 00000 01112457889999999
Q ss_pred eeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 257 HGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++|.+++++..+.+.+.+ +++++++++++||+++ ++|+++.+.+.+++
T Consensus 215 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 265 (272)
T 3fsg_A 215 VGRNDQVVGYQEQLKLINHN--ENGEIVLLNRTGHNLMIDQREAVGFHFDLFL 265 (272)
T ss_dssp EETTCTTTCSHHHHHHHTTC--TTEEEEEESSCCSSHHHHTHHHHHHHHHHHH
T ss_pred EeCCCCcCCHHHHHHHHHhc--CCCeEEEecCCCCCchhcCHHHHHHHHHHHH
Confidence 99999999999999999887 6799999999999999 99999998887753
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=224.26 Aligned_cols=255 Identities=11% Similarity=0.055 Sum_probs=161.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
..+.+.+|.+++|...++. ++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+....++++++
T Consensus 23 ~~~~~~~g~~l~y~~~G~g----~~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~~~~~~~~~~ 96 (318)
T 2psd_A 23 CKQMNVLDSFINYYDSEKH----AENAVIFLHGNATSSY-LWRHVVPHIEPV-ARCIIPDLIGMGKSGKSGNGSYRLLDH 96 (318)
T ss_dssp CEEEEETTEEEEEEECCSC----TTSEEEEECCTTCCGG-GGTTTGGGTTTT-SEEEEECCTTSTTCCCCTTSCCSHHHH
T ss_pred ceEEeeCCeEEEEEEcCCC----CCCeEEEECCCCCcHH-HHHHHHHHhhhc-CeEEEEeCCCCCCCCCCCCCccCHHHH
Confidence 3455678999999887643 2468999999998876 678888888765 899999999999998764334688999
Q ss_pred HHHHHHHHHHHHH-hcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC--CCCCchhhhhHHHhhh--
Q 035721 114 VEDAISFFDSFRA-RHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK--FKPPWPLEHLLFTVAW-- 188 (308)
Q Consensus 114 ~~d~~~~l~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 188 (308)
++|+.++++.++. . +++|+||||||.+|+.+|.++|++|+++|++++....... ...... .....+..
T Consensus 97 a~dl~~ll~~l~~~~-----~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 169 (318)
T 2psd_A 97 YKYLTAWFELLNLPK-----KIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIE--EDIALIKSEE 169 (318)
T ss_dssp HHHHHHHHTTSCCCS-----SEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCH--HHHHHHHSTH
T ss_pred HHHHHHHHHhcCCCC-----CeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHH--HHHHHHhccc
Confidence 9999999998765 4 9999999999999999999999999999998764321100 001110 11110000
Q ss_pred ----hCCCccccc--CCCCCCCcccccHHHHHHHhhCCCCC-C-CcchHHH----------HHHHHHHHHHhhhhcCCC-
Q 035721 189 ----LVPTWRVVP--TRGSLPMVSFKEEWKRKLALSSPRRP-V-ARPRAAT----------ALELLRVSRDLQGRFEEV- 249 (308)
Q Consensus 189 ----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~----------~~~~~~~~~~~~~~~~~i- 249 (308)
......... ....... ..... ....+....... . ......+ .........+..+.+.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 247 (318)
T 2psd_A 170 GEKMVLENNFFVETVLPSKIMR-KLEPE-EFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASD 247 (318)
T ss_dssp HHHHHTTTCHHHHTHHHHTCSS-CCCHH-HHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCT
T ss_pred chhhhhcchHHHHhhccccccc-cCCHH-HHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcccc
Confidence 000000000 0000000 00011 111111100000 0 0000000 000111112233446677
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|+++|+|++| ++++ .++.+.+.+ ++++++++ ++||+++ ++|+++++.|.+++
T Consensus 248 ~~P~Lvi~G~~D-~~~~-~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 302 (318)
T 2psd_A 248 DLPKLFIESDPG-FFSN-AIVEGAKKF--PNTEFVKV-KGLHFLQEDAPDEMGKYIKSFV 302 (318)
T ss_dssp TSCEEEEEEEEC-SSHH-HHHHHHTTS--SSEEEEEE-EESSSGGGTCHHHHHHHHHHHH
T ss_pred CCCeEEEEeccc-cCcH-HHHHHHHhC--CCcEEEEe-cCCCCCHhhCHHHHHHHHHHHH
Confidence 999999999999 8877 778888777 67888888 6899999 99999999988763
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=221.67 Aligned_cols=238 Identities=11% Similarity=0.039 Sum_probs=154.4
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+....++++++++|+.++++.+... .+++++
T Consensus 4 g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~----~~~~lv 78 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPEN----EEVILV 78 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTT----CCEEEE
T ss_pred CCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhccc----CceEEE
Confidence 478999999998887 568899999999999999999999999986655579999999999999988551 399999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccc-cCCCCCC-CcccccHHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVV-PTRGSLP-MVSFKEEWKRKL 215 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 215 (308)
|||+||.+++.+|.++|++|+++|++++........ ...................... ....... ...+........
T Consensus 79 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3dqz_A 79 GFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHV-PSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKAR 157 (258)
T ss_dssp EETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSC-TTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred EeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCc-chHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHH
Confidence 999999999999999999999999999864432211 1101111110000000000000 0000000 000001111100
Q ss_pred HhhCCCCCCCcchHHHHHHHH-------HHH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEe
Q 035721 216 ALSSPRRPVARPRAATALELL-------RVS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (308)
... .............. ... ..........++|+++++|++|.++|++..+.+.+.+ ++++++++
T Consensus 158 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~ 231 (258)
T 3dqz_A 158 LYQ----NCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF--NVSKVYEI 231 (258)
T ss_dssp TST----TSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS--CCSCEEEE
T ss_pred hhc----cCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC--CcccEEEc
Confidence 000 00000000000000 000 0001112223699999999999999999999999998 67899999
Q ss_pred cCCccccc-CCchhhHHHhhhc
Q 035721 287 PGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 287 ~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+++||+++ ++|+++++.|.++
T Consensus 232 ~~~gH~~~~~~p~~~~~~i~~f 253 (258)
T 3dqz_A 232 DGGDHMVMLSKPQKLFDSLSAI 253 (258)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHH
T ss_pred CCCCCchhhcChHHHHHHHHHH
Confidence 99999999 9999999988765
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=213.19 Aligned_cols=239 Identities=16% Similarity=0.136 Sum_probs=165.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
.+.||.+++|..+.+.+ +++|+||++||++++.. +.+..+.+.|.++||+|+++|+||+|.|...... ++++++++
T Consensus 18 ~~~~g~~l~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~ 94 (270)
T 3llc_A 18 QGSDARSIAALVRAPAQ--DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRD-GTISRWLE 94 (270)
T ss_dssp SGGGCEEEEEEEECCSS--TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGG-CCHHHHHH
T ss_pred eccCcceEEEEeccCCC--CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcccc-ccHHHHHH
Confidence 34699999998776543 34789999999998754 2345678888888999999999999999876544 58999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh---cC---CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR---QK---GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
|+.++++++... +++++|||+||.+|+.++.+ +| ++++++|++++....................+...
T Consensus 95 d~~~~~~~l~~~-----~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (270)
T 3llc_A 95 EALAVLDHFKPE-----KAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAEN 169 (270)
T ss_dssp HHHHHHHHHCCS-----EEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHhccC-----CeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhhhhhhcc
Confidence 999999998755 99999999999999999999 99 89999999999765332111100111111111000
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
... .... .+..... ............ ......+.++++|+++++|++|.+++.+.+
T Consensus 170 ~~~---~~~~-~~~~~~~-------------------~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~ 225 (270)
T 3llc_A 170 GYF---EEVS-EYSPEPN-------------------IFTRALMEDGRA-NRVMAGMIDTGCPVHILQGMADPDVPYQHA 225 (270)
T ss_dssp SEE---EECC-TTCSSCE-------------------EEEHHHHHHHHH-TCCTTSCCCCCSCEEEEEETTCSSSCHHHH
T ss_pred Ccc---cChh-hcccchh-------------------HHHHHHHhhhhh-hhhhhhhhcCCCCEEEEecCCCCCCCHHHH
Confidence 000 0000 0000000 000000000000 122455778899999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 270 EELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
+.+.+.++++++++++++++||++. +.++++.+.+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 265 (270)
T 3llc_A 226 LKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAM 265 (270)
T ss_dssp HHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHH
Confidence 9999998544499999999999655 6677777777665
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=222.95 Aligned_cols=250 Identities=16% Similarity=0.119 Sum_probs=158.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc----CCC
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH----IPD 109 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~ 109 (308)
..+...+|.+++|..++. +|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|+..... .++
T Consensus 15 ~~~~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~-~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 86 (306)
T 3r40_A 15 SEWINTSSGRIFARVGGD------GPPLLLLHGFPQTHV-MWHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYT 86 (306)
T ss_dssp EEEECCTTCCEEEEEEEC------SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGS
T ss_pred eEEEEeCCEEEEEEEcCC------CCeEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCC
Confidence 455577899999998762 568999999998887 56889999987 899999999999999887653 468
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh-h------
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH-L------ 182 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~------ 182 (308)
++++++|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|++++................ .
T Consensus 87 ~~~~~~~~~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T 3r40_A 87 KRAMAKQLIEAMEQLGHV-----HFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFL 161 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC-----CEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHh
Confidence 899999999999987665 9999999999999999999999999999999985331110000000000 0
Q ss_pred ---------------HHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--------
Q 035721 183 ---------------LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-------- 239 (308)
Q Consensus 183 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 239 (308)
..........+... ......... ....+.... ............+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 232 (306)
T 3r40_A 162 AQPAPLPENLLGGDPDFYVKAKLASWTRA-----GDLSAFDPR-AVEHYRIAF---ADPMRRHVMCEDYRAGAYADFEHD 232 (306)
T ss_dssp TSCTTHHHHHHTSCHHHHHHHHHHHTSSS-----SSSTTSCHH-HHHHHHHHH---TSHHHHHHHHHHHHHHHTHHHHHH
T ss_pred hcccchHHHHHcCCHHHHHHHHhhcccCC-----CccccCCHH-HHHHHHHHH---ccCCCcchhhHHHHhcccccchhh
Confidence 00000000000000 000000111 111110000 0001111111111111
Q ss_pred HHhhhhcCCCCcceEEEeeCCCcccCh-HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 240 RDLQGRFEEVEVPMLICHGGDDVVCDP-ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 240 ~~~~~~~~~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
......+.++++|+++|+|++|.+++. ...+.+.+.. ++++++++ ++||+++ ++|+++++.|.+++
T Consensus 233 ~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl 300 (306)
T 3r40_A 233 KIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWA--SDVQGAPI-ESGHFLPEEAPDQTAEALVRFF 300 (306)
T ss_dssp HHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHB--SSEEEEEE-SSCSCHHHHSHHHHHHHHHHHH
T ss_pred hhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhc--CCCeEEEe-cCCcCchhhChHHHHHHHHHHH
Confidence 001124688999999999999999984 4455555555 67899999 6899999 99999999988763
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=225.56 Aligned_cols=271 Identities=15% Similarity=0.076 Sum_probs=174.1
Q ss_pred cceeEEcCCCcEEEEEEecCCC-----CCCCcceEEEEccCCCccchHHHHHHHHHH----HcCC---eEEEecCCCCcC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLP-----PAKTLGVLCVVHGFTGESSWIVQLTAVLFA----KSGF---ATCAIDHQGHGF 99 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~-----~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~----~~g~---~v~~~d~~G~G~ 99 (308)
....+...||.+|+|..+++.+ ...++|+|||+||++++.. .|..+++.|. +.|| +|+++|+||||.
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~ 99 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGD 99 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHH
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCC
Confidence 3445668899999999999764 1234689999999999887 5678888888 3488 999999999999
Q ss_pred CCCcc----ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC--
Q 035721 100 SDGLV----AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK-- 172 (308)
Q Consensus 100 s~~~~----~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-- 172 (308)
|+... ...+++.++++|+.++++.+..... ...+++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 100 S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 179 (398)
T 2y6u_A 100 SAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIG 179 (398)
T ss_dssp HHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCS
T ss_pred CCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccc
Confidence 97643 2246888899999999987652100 1224999999999999999999999999999999997654210
Q ss_pred ----CCCC---chhhhhHHHhhhhCCCccc--------ccCCCCCCCcccccHHHHHHHhhC-----------CCCCCCc
Q 035721 173 ----FKPP---WPLEHLLFTVAWLVPTWRV--------VPTRGSLPMVSFKEEWKRKLALSS-----------PRRPVAR 226 (308)
Q Consensus 173 ----~~~~---~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 226 (308)
.... .........+......... .... .+... .++.....+... ...+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2y6u_A 180 AGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNG-SFFTN--AHSQILQNIIDFERTKASGDDEDGGPVRTK 256 (398)
T ss_dssp CCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHT-STTTT--SCHHHHHHHHHHHEEC--------CCEEES
T ss_pred cccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcC-ccccc--CCHHHHHHHHHhcCccccccccCCCceEec
Confidence 0000 0011111111111100000 0000 00000 011111111100 0000000
Q ss_pred chHHHHH----HHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhH
Q 035721 227 PRAATAL----ELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENV 301 (308)
Q Consensus 227 ~~~~~~~----~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~ 301 (308)
....... .......+....+.++++|+|+|+|++|.+++++.++.+.+.+ +++++++++++||+++ ++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~--~~~~~~~~~~~gH~~~~e~p~~~~ 334 (398)
T 2y6u_A 257 MEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL--QNYHLDVIPGGSHLVNVEAPDLVI 334 (398)
T ss_dssp SCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC--SSEEEEEETTCCTTHHHHSHHHHH
T ss_pred CCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC--CCceEEEeCCCCccchhcCHHHHH
Confidence 0000000 0000112334567889999999999999999999999999998 6799999999999999 9999999
Q ss_pred HHhhhcC
Q 035721 302 ELVFGEM 308 (308)
Q Consensus 302 ~~i~~~i 308 (308)
+.|.+++
T Consensus 335 ~~i~~fl 341 (398)
T 2y6u_A 335 ERINHHI 341 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887653
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=224.63 Aligned_cols=236 Identities=16% Similarity=0.192 Sum_probs=153.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc---ccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV---AHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
+|+|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+... ...++++++++|+.++++.++.+ ++
T Consensus 20 ~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~-----~~ 92 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLK-----ET 92 (271)
T ss_dssp SSEEEEECCTTCCGG-GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCS-----CE
T ss_pred CCcEEEEcCCCCchh-hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCC-----Ce
Confidence 478999999998877 67888888876 5999999999999998643 22247889999999999988765 99
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC---CCCchh---hhhHHHhhhhCCCcccccCCCCCCCcccc
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF---KPPWPL---EHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+++||||||.+|+.+|.++|++|+++|++++........ ...... .............+...... ...... .
T Consensus 93 ~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~ 170 (271)
T 1wom_A 93 VFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAA-TVLNQP-D 170 (271)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHH-HHHCCT-T
T ss_pred EEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHH-HHhcCC-C
Confidence 999999999999999999999999999999864321110 000000 00110000000000000000 000000 0
Q ss_pred cHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEe
Q 035721 209 EEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286 (308)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (308)
.+............ . .. .......... .+....+.++++|+++|+|++|.+++++..+.+.+.+ ++++++++
T Consensus 171 ~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i 244 (271)
T 1wom_A 171 RPEIKEELESRFCS-T-DP--VIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL--PYSSLKQM 244 (271)
T ss_dssp CHHHHHHHHHHHHH-S-CH--HHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS--SSEEEEEE
T ss_pred chHHHHHHHHHHhc-C-Cc--HHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC--CCCEEEEe
Confidence 00000000000000 0 00 0000111110 1233457889999999999999999999999999888 67999999
Q ss_pred cCCccccc-CCchhhHHHhhhcC
Q 035721 287 PGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 287 ~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++||+++ ++|+++++.|.+++
T Consensus 245 ~~~gH~~~~e~p~~~~~~i~~fl 267 (271)
T 1wom_A 245 EARGHCPHMSHPDETIQLIGDYL 267 (271)
T ss_dssp EEESSCHHHHCHHHHHHHHHHHH
T ss_pred CCCCcCccccCHHHHHHHHHHHH
Confidence 99999999 99999999887753
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=219.71 Aligned_cols=257 Identities=11% Similarity=-0.002 Sum_probs=160.6
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH-----HHHHHHHcCCeEEEecCCCCcCCCCccccC---
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL-----TAVLFAKSGFATCAIDHQGHGFSDGLVAHI--- 107 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--- 107 (308)
-+..+|.+++|..+++++ ..+|+|||+||++++...+|.. +++.|++ +|+|+++|+||||.|.......
T Consensus 15 ~~~~~~~~l~y~~~G~~~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~ 91 (286)
T 2qmq_A 15 SVETPYGSVTFTVYGTPK--PKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQY 91 (286)
T ss_dssp EEEETTEEEEEEEESCCC--TTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCC
T ss_pred ccccCCeEEEEEeccCCC--CCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCc
Confidence 345578999999988653 2478999999999887644554 7888876 5999999999999886542222
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
++++++++|+.++++.+... +++++|||+||.+++.+|.++|++|+++|++++...... ..........
T Consensus 92 ~~~~~~~~~l~~~l~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~~~~~~ 160 (286)
T 2qmq_A 92 PSLDQLADMIPCILQYLNFS-----TIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKG------WMDWAAHKLT 160 (286)
T ss_dssp CCHHHHHHTHHHHHHHHTCC-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC------HHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhCCC-----cEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccc------hhhhhhhhhc
Confidence 38899999999999988665 999999999999999999999999999999999653211 1111111111
Q ss_pred hhCCCcccccCCCCCCCcc-cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh---hhhcCCCCcceEEEeeCCCcc
Q 035721 188 WLVPTWRVVPTRGSLPMVS-FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL---QGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~P~l~i~g~~D~~ 263 (308)
..............+.... ...+.....+.......................... ...+.++++|+++++|++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 240 (286)
T 2qmq_A 161 GLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPH 240 (286)
T ss_dssp HTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTT
T ss_pred cccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcc
Confidence 1100000000000000000 000000111100000000000111111111110011 234668899999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++ ...+.+.+..+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 241 ~~-~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 284 (286)
T 2qmq_A 241 ED-AVVECNSKLDP-TQTSFLKMADSGGQPQLTQPGKLTEAFKYFL 284 (286)
T ss_dssp HH-HHHHHHHHSCG-GGEEEEEETTCTTCHHHHCHHHHHHHHHHHH
T ss_pred cc-HHHHHHHHhcC-CCceEEEeCCCCCcccccChHHHHHHHHHHh
Confidence 97 44444444442 2789999999999999 99999999988764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=233.83 Aligned_cols=264 Identities=15% Similarity=0.118 Sum_probs=176.4
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIP 108 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~ 108 (308)
..+..++.+.||.+++|..+++ +|+||++||++++.. .|..+++.|.++||+|+++|+||||.|+.... ..+
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g~------~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~ 308 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELGS------GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEY 308 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEECS------SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGG
T ss_pred ccceeEEEeCCCcEEEEEEcCC------CCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccc
Confidence 3456678888999999988762 578999999998887 66889999999999999999999999987653 235
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh---------
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL--------- 179 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~--------- 179 (308)
+.+++++|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|++++..............
T Consensus 309 ~~~~~~~d~~~~~~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (555)
T 3i28_A 309 CMEVLCKEMVTFLDKLGLS-----QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDY 383 (555)
T ss_dssp SHHHHHHHHHHHHHHHTCS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCC-----cEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccch
Confidence 7889999999999988665 99999999999999999999999999999998865433221110000
Q ss_pred ---------------hhhHHHhhhhCCCccccc----------------CCCCCCCcccccHHHHHHHhhCCCCCCCcch
Q 035721 180 ---------------EHLLFTVAWLVPTWRVVP----------------TRGSLPMVSFKEEWKRKLALSSPRRPVARPR 228 (308)
Q Consensus 180 ---------------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
.................. ................ .+............
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 462 (555)
T 3i28_A 384 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ-FYVQQFKKSGFRGP 462 (555)
T ss_dssp HHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHH-HHHHHHTTTTTHHH
T ss_pred hHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHH-HHHHHHhcccchhH
Confidence 000011111111100000 0000000011111111 11100000000000
Q ss_pred HHHHHHHHH-HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 229 AATALELLR-VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
......... ...+....+.++++|+++++|++|.++|++.++.+.+.+ +++++++++++||+++ ++|+++.+.|.+
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 540 (555)
T 3i28_A 463 LNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKPTEVNQILIK 540 (555)
T ss_dssp HHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred HHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC--CCceEEEeCCCCCCcchhCHHHHHHHHHH
Confidence 000000000 012445567789999999999999999999999988888 6899999999999999 999999988876
Q ss_pred cC
Q 035721 307 EM 308 (308)
Q Consensus 307 ~i 308 (308)
++
T Consensus 541 fl 542 (555)
T 3i28_A 541 WL 542 (555)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-32 Score=214.71 Aligned_cols=250 Identities=17% Similarity=0.159 Sum_probs=167.3
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
......+|.+++|..+++ +|+||++||++++.. .|+.+++.|++ ||+|+++|+||+|.|+.... .++++++
T Consensus 50 ~~~~~~~~~~~~~~~~g~------~p~vv~lhG~~~~~~-~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~ 120 (314)
T 3kxp_A 50 SRRVDIGRITLNVREKGS------GPLMLFFHGITSNSA-VFEPLMIRLSD-RFTTIAVDQRGHGLSDKPET-GYEANDY 120 (314)
T ss_dssp EEEEECSSCEEEEEEECC------SSEEEEECCTTCCGG-GGHHHHHTTTT-TSEEEEECCTTSTTSCCCSS-CCSHHHH
T ss_pred eeeEEECCEEEEEEecCC------CCEEEEECCCCCCHH-HHHHHHHHHHc-CCeEEEEeCCCcCCCCCCCC-CCCHHHH
Confidence 344456888999988754 568999999998887 66889999977 69999999999999985433 3689999
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++|+.++++++... +++++|||+||.+++.+|.++|++++++|++++....... ............
T Consensus 121 ~~dl~~~l~~l~~~-----~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~~~~~~~~~~~~ 186 (314)
T 3kxp_A 121 ADDIAGLIRTLARG-----HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETE---------ALDALEARVNAG 186 (314)
T ss_dssp HHHHHHHHHHHTSS-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHH---------HHHHHHHHTTTT
T ss_pred HHHHHHHHHHhCCC-----CcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcc---------hhhHHHHHhhhc
Confidence 99999999998765 9999999999999999999999999999999986533211 011111111100
Q ss_pred ccccCCCC-C------CCcccccHHHHHHHhhCCCCC----CCcchHHHHHHHHHHH-HHhhhhcCCCCcceEEEeeCCC
Q 035721 194 RVVPTRGS-L------PMVSFKEEWKRKLALSSPRRP----VARPRAATALELLRVS-RDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 194 ~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D 261 (308)
........ . ..................... ................ .+....+.++++|+++++|++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D 266 (314)
T 3kxp_A 187 SQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESS 266 (314)
T ss_dssp CSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTC
T ss_pred hhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCC
Confidence 00000000 0 000000000000000000000 0000000000110000 0333446678999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+++++.++.+.+.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 267 ~~~~~~~~~~~~~~~--~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl 312 (314)
T 3kxp_A 267 KLVSAAALAKTSRLR--PDLPVVVVPGADHYVNEVSPEITLKAITNFI 312 (314)
T ss_dssp SSSCHHHHHHHHHHC--TTSCEEEETTCCSCHHHHCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhC--CCceEEEcCCCCCcchhhCHHHHHHHHHHHH
Confidence 999999999999998 6799999999999999 99999999888764
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=220.73 Aligned_cols=283 Identities=12% Similarity=0.093 Sum_probs=179.2
Q ss_pred CCcccccccccccccceeEEcCCCcEEEEEEecCCCCC----CCcceEEEEccCCCccchHHHH------HHHHHHHcCC
Q 035721 18 LTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPA----KTLGVLCVVHGFTGESSWIVQL------TAVLFAKSGF 87 (308)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~------~~~~l~~~g~ 87 (308)
++..+.....+++.+...+.+.||.++.+..+.+.... .++|+||++||++++.. .|.. ++..|+++||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~a~~l~~~G~ 92 (377)
T 1k8q_A 14 MNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGY 92 (377)
T ss_dssp CCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTC
T ss_pred cCHHHHHHHcCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-hhhcCCCcccHHHHHHHCCC
Confidence 34445556667888889999999999999888655321 25789999999998876 3333 4448999999
Q ss_pred eEEEecCCCCcCCCCc-----ccc---CCCcchHHH-HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---
Q 035721 88 ATCAIDHQGHGFSDGL-----VAH---IPDLNPVVE-DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--- 155 (308)
Q Consensus 88 ~v~~~d~~G~G~s~~~-----~~~---~~~~~~~~~-d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--- 155 (308)
+|+++|+||||.|... ... .++++++++ |+.++++.+.... +..+++++||||||.+++.+|.++|+
T Consensus 93 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~ 171 (377)
T 1k8q_A 93 DVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT-GQDKLHYVGHSQGTTIGFIAFSTNPKLAK 171 (377)
T ss_dssp EEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH-CCSCEEEEEETHHHHHHHHHHHHCHHHHT
T ss_pred CEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc-CcCceEEEEechhhHHHHHHHhcCchhhh
Confidence 9999999999999863 111 357888888 9999988765543 55699999999999999999999998
Q ss_pred CccEEEEeCCcCCCCcCCCCCchhhh-hHHHhhhhCCCcccccCC------------C---------------CCCCccc
Q 035721 156 AWDGLILNGAMCGISQKFKPPWPLEH-LLFTVAWLVPTWRVVPTR------------G---------------SLPMVSF 207 (308)
Q Consensus 156 ~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~---------------~~~~~~~ 207 (308)
+|+++|+++|................ ....+..........+.. . .......
T Consensus 172 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (377)
T 1k8q_A 172 RIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNL 251 (377)
T ss_dssp TEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGS
T ss_pred hhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccC
Confidence 89999999987543321110000000 000000000000000000 0 0000000
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHH-----------------HHH------hhhhcCCCCcceEEEeeCCCccc
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRV-----------------SRD------LQGRFEEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~------~~~~~~~i~~P~l~i~g~~D~~~ 264 (308)
............+ ..........+... ... ....+.++++|+|+++|++|.++
T Consensus 252 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 327 (377)
T 1k8q_A 252 NMSRLDVYLSHNP----AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327 (377)
T ss_dssp CGGGHHHHHTTCC----CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSS
T ss_pred CHHHHHHHhccCC----CCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCccc
Confidence 0000000000000 00011111111100 000 11237788999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCc-EEEecCCccccc----CCchhhHHHhhhcC
Q 035721 265 DPACVEELYKRAASKDKT-LSIYPGMWHQLI----GEPEENVELVFGEM 308 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~----~~~~~~~~~i~~~i 308 (308)
|++.++.+.+.+ ++.+ +++++++||+.+ ++|+++.+.|.+++
T Consensus 328 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 374 (377)
T 1k8q_A 328 DPHDVDLLLSKL--PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM 374 (377)
T ss_dssp CHHHHHHHHTTC--TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHH
T ss_pred CHHHHHHHHHhC--cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHh
Confidence 999999999888 5666 999999999987 67888888887653
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=217.32 Aligned_cols=239 Identities=19% Similarity=0.166 Sum_probs=150.2
Q ss_pred EEEEEEecCCCCCCCcc-eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLG-VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~-~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
+++|...++ .| +|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.. ..++++++++++.+.+
T Consensus 3 ~l~~~~~G~------g~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~~l 72 (258)
T 1m33_A 3 NIWWQTKGQ------GNVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGF--GALSLADMAEAVLQQA 72 (258)
T ss_dssp CCCEEEECC------CSSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSC--CCCCHHHHHHHHHTTS
T ss_pred ceEEEEecC------CCCeEEEECCCCCChH-HHHHHHHHhhc-CcEEEEeeCCCCCCCCCC--CCcCHHHHHHHHHHHh
Confidence 466766653 24 7999999998887 67889999975 699999999999999876 2357777766655443
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh----hhhHHHhh----hhCCCc
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL----EHLLFTVA----WLVPTW 193 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~ 193 (308)
+ .+++|+||||||.+|+.+|.++|++|+++|++++.............. ..+...+. .....+
T Consensus 73 ~---------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
T 1m33_A 73 P---------DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERF 143 (258)
T ss_dssp C---------SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---------CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHH
Confidence 2 399999999999999999999999999999998764332111100000 01100000 000000
Q ss_pred ccccCCCCCCCccccc--HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHH
Q 035721 194 RVVPTRGSLPMVSFKE--EWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
... . ......... ............ ............... .+....+.++++|+++|+|++|.+++.+.++.
T Consensus 144 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~ 217 (258)
T 1m33_A 144 LAL--Q-TMGTETARQDARALKKTVLALPM--PEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM 217 (258)
T ss_dssp HHT--T-STTSTTHHHHHHHHHHHHHTSCC--CCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-
T ss_pred HHH--H-hcCCccchhhHHHHHHHHHhccC--CcHHHHHHHHHHHHh-CCHHHHHhhCCCCEEEEeecCCCCCCHHHHHH
Confidence 000 0 000000000 000111111100 000111111111111 23345677899999999999999999988888
Q ss_pred HHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 218 ~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 253 (258)
T 1m33_A 218 LDKLW--PHSESYIFAKAAHAPFISHPAEFCHLLVALK 253 (258)
T ss_dssp CTTTC--TTCEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHhC--ccceEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 77776 6789999999999999 99999999887753
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=221.63 Aligned_cols=259 Identities=12% Similarity=0.011 Sum_probs=168.9
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc---
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--- 106 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--- 106 (308)
++....+.+.+|.+++|..+++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.....
T Consensus 6 p~~~~~~~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~ 77 (297)
T 2qvb_A 6 PYGQPKYLEIAGKRMAYIDEGK------GDAIVFQHGNPTSSY-LWRNIMPHLEGL-GRLVACDLIGMGASDKLSPSGPD 77 (297)
T ss_dssp CSSCCEEEEETTEEEEEEEESS------SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTT
T ss_pred cCCCceEEEECCEEEEEEecCC------CCeEEEECCCCchHH-HHHHHHHHHhhc-CeEEEEcCCCCCCCCCCCCcccc
Confidence 3423455567899999988763 478999999998887 567888888765 99999999999999875321
Q ss_pred CCCcchHHHHHHHHHHHHHH-hcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHH
Q 035721 107 IPDLNPVVEDAISFFDSFRA-RHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
.++++++++|+.++++.+.. + +++++|||+||.+++.+|.++|++|+++|++++....................
T Consensus 78 ~~~~~~~~~~~~~~l~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 152 (297)
T 2qvb_A 78 RYSYGEQRDFLFALWDALDLGD-----HVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQG 152 (297)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCS-----CEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCC-----ceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHH
Confidence 15889999999999998865 4 99999999999999999999999999999999866422111111111111111
Q ss_pred hhhhCCCcccccCC-------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH-------------HHHHhhhh
Q 035721 186 VAWLVPTWRVVPTR-------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR-------------VSRDLQGR 245 (308)
Q Consensus 186 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 245 (308)
+............. ......... ......+........ ........... ...+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (297)
T 2qvb_A 153 FRSPQGEPMALEHNIFVERVLPGAILRQLS-DEEMNHYRRPFVNGG--EDRRPTLSWPRNLPIDGEPAEVVALVNEYRSW 229 (297)
T ss_dssp HTSTTHHHHHHTTCHHHHTHHHHTCSSCCC-HHHHHHHHGGGCSSS--GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH
T ss_pred HhcccchhhhccccHHHHHHHhccccccCC-HHHHHHHHHHhcCcc--cchhhHHHHHHhccccCCchhhHHHHHHHHhh
Confidence 10000000000000 000000011 111111111110000 01111111111 12344556
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++++|++|.+++++..+.+.+.+ ++ +++++ ++||+++ ++|+++.+.|.+++
T Consensus 230 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl 289 (297)
T 2qvb_A 230 LEETDMPKLFINAEPGAIITGRIRDYVRSWP--NQ-TEITV-PGVHFVQEDSPEEIGAAIAQFV 289 (297)
T ss_dssp HHHCCSCEEEEEEEECSSSCHHHHHHHHTSS--SE-EEEEE-EESSCGGGTCHHHHHHHHHHHH
T ss_pred cccccccEEEEecCCCCcCCHHHHHHHHHHc--CC-eEEEe-cCccchhhhCHHHHHHHHHHHH
Confidence 6788999999999999999999999998887 56 99999 9999999 99999999887753
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=227.99 Aligned_cols=259 Identities=9% Similarity=-0.051 Sum_probs=161.1
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccch------------HHHHHH---HHHHHcCCeEEEecCCCCcCCCC---
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW------------IVQLTA---VLFAKSGFATCAIDHQGHGFSDG--- 102 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~--- 102 (308)
|.+|+|..+++.++ ..+|+|||+||++++... +|+.++ +.|..+||+|+++|+||||.|++
T Consensus 26 ~~~i~y~~~g~~~~-~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~ 104 (377)
T 3i1i_A 26 PVQMGYETYGTLNR-ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHV 104 (377)
T ss_dssp EEEEEEEEESCCCT-TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTC
T ss_pred eeeEEEEeecccCC-CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCc
Confidence 55779999987654 346899999999988653 366676 66767899999999999987541
Q ss_pred ----ccc-------------cCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEE-e
Q 035721 103 ----LVA-------------HIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLIL-N 163 (308)
Q Consensus 103 ----~~~-------------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl-~ 163 (308)
+.. ..++++++++|+.++++.++.+ +++ |+||||||.+|+.+|.++|++|+++|+ +
T Consensus 105 g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~-----~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 179 (377)
T 3i1i_A 105 ITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIA-----RLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVI 179 (377)
T ss_dssp CCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCC-----CBSEEEEETHHHHHHHHHHHHCTTTBSEEEEES
T ss_pred ccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCC-----cEeeEEeeCHhHHHHHHHHHHChHHHHHhcccC
Confidence 110 1357889999999999888765 775 999999999999999999999999999 7
Q ss_pred CCcCCCCcCCCCCc-hhhhhH--------------------H---HhhhhCC---CcccccCCCCCCCc----ccc----
Q 035721 164 GAMCGISQKFKPPW-PLEHLL--------------------F---TVAWLVP---TWRVVPTRGSLPMV----SFK---- 208 (308)
Q Consensus 164 ~~~~~~~~~~~~~~-~~~~~~--------------------~---~~~~~~~---~~~~~~~~~~~~~~----~~~---- 208 (308)
++............ ...... . ....... .............. .+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 3i1i_A 180 TNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTS 259 (377)
T ss_dssp CCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCH
T ss_pred cCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhH
Confidence 76543111000000 000000 0 0000000 00000000000000 000
Q ss_pred cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH---------hhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC-
Q 035721 209 EEWKRKLALSSPRRPVARPRAATALELLRVSRD---------LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS- 278 (308)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 278 (308)
............. ................. ....+.++++|+++|+|++|.+++++.++.+.+.+..
T Consensus 260 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~ 336 (377)
T 3i1i_A 260 FEKEINKLTYRSI---ELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQ 336 (377)
T ss_dssp HHHHHHHHHHHTT---TTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhh---cccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhc
Confidence 0000000000000 01111111122221111 1345678999999999999999999999999988832
Q ss_pred -CCCcEEEecC-Cccccc-CCchhhHHHhhhcC
Q 035721 279 -KDKTLSIYPG-MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 279 -~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++++++++ +||+++ ++|+++++.|.+++
T Consensus 337 g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl 369 (377)
T 3i1i_A 337 GKYAEVYEIESINGHMAGVFDIHLFEKKVYEFL 369 (377)
T ss_dssp TCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHH
T ss_pred CCCceEEEcCCCCCCcchhcCHHHHHHHHHHHH
Confidence 5789999998 999999 99999999888763
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=219.57 Aligned_cols=237 Identities=16% Similarity=0.135 Sum_probs=162.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
+...++.+++|..+++. +|+|||+||++++.. .|..+.+.| ||+|+++|+||+|.|+......++.+++++
T Consensus 64 ~~~~~~~~~~~~~~g~~-----~~~vv~~hG~~~~~~-~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~ 134 (330)
T 3p2m_A 64 VERVQAGAISALRWGGS-----APRVIFLHGGGQNAH-TWDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSE 134 (330)
T ss_dssp EEEEEETTEEEEEESSS-----CCSEEEECCTTCCGG-GGHHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHHH
T ss_pred ceeecCceEEEEEeCCC-----CCeEEEECCCCCccc-hHHHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHHH
Confidence 44455668999888753 578999999998887 567777776 899999999999999966555578999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc-c
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW-R 194 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 194 (308)
|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|++++....... ........... .
T Consensus 135 dl~~~l~~l~~~-----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----------~~~~~~~~~~~~~ 199 (330)
T 3p2m_A 135 TLAPVLRELAPG-----AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQR----------HAELTAEQRGTVA 199 (330)
T ss_dssp HHHHHHHHSSTT-----CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHH----------HHHHTCC------
T ss_pred HHHHHHHHhCCC-----CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchh----------hhhhhhhhhhhhh
Confidence 999999988765 9999999999999999999999999999999985331100 00000000000 0
Q ss_pred cccCCCCCCC--c----------ccccHHHHHHHhhCC------------CCCCCcchHHHHHHHHHHHHHhhhhcCCCC
Q 035721 195 VVPTRGSLPM--V----------SFKEEWKRKLALSSP------------RRPVARPRAATALELLRVSRDLQGRFEEVE 250 (308)
Q Consensus 195 ~~~~~~~~~~--~----------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 250 (308)
.......+.. . ............... ........ ..+..+.+.+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~ 269 (330)
T 3p2m_A 200 LMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGD----------FAGLWDDVDALS 269 (330)
T ss_dssp -----CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCC----------HHHHHHHHHHCC
T ss_pred hhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccc----------cHHHHHHHhhCC
Confidence 0000000000 0 000000011111000 00000000 012234566789
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCc-EEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKT-LSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++++|++|.+++++.++.+.+.+ ++++ +++++++||+++ ++|+++++.|.+++
T Consensus 270 ~PvLii~G~~D~~v~~~~~~~l~~~~--~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 327 (330)
T 3p2m_A 270 APITLVRGGSSGFVTDQDTAELHRRA--THFRGVHIVEKSGHSVQSDQPRALIEIVRGVL 327 (330)
T ss_dssp SCEEEEEETTCCSSCHHHHHHHHHHC--SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHH
Confidence 99999999999999999999999998 6788 999999999999 99999999988765
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=219.71 Aligned_cols=125 Identities=22% Similarity=0.299 Sum_probs=107.1
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPV 113 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~ 113 (308)
.+.+.+|.+++|..+++.+ ..+|+|||+||++++.. .|..+++.|.++||+|+++|+||+|.|..... ..++++++
T Consensus 6 ~~~~~~g~~l~y~~~G~~~--~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~ 82 (356)
T 2e3j_A 6 RILNCRGTRIHAVADSPPD--QQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKEL 82 (356)
T ss_dssp EEEEETTEEEEEEEECCTT--CCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHH
T ss_pred EEEccCCeEEEEEEecCCC--CCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHH
Confidence 3445689999999988753 24689999999998877 66789999998899999999999999987543 23578889
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
++|+.++++.+..+ +++++|||+||.+++.++.++|++|+++|++++..
T Consensus 83 ~~~~~~~~~~l~~~-----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 83 VGDVVGVLDSYGAE-----QAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHTTCS-----CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHcCCC-----CeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 99999999887665 99999999999999999999999999999999765
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=221.88 Aligned_cols=259 Identities=13% Similarity=0.036 Sum_probs=169.7
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc---
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA--- 105 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 105 (308)
+++....+...+|.+++|..+++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||+|.|+.+..
T Consensus 6 ~p~~~~~~~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~ 77 (302)
T 1mj5_A 6 KPFGEKKFIEIKGRRMAYIDEGT------GDPILFQHGNPTSSY-LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGP 77 (302)
T ss_dssp SCSSCCEEEEETTEEEEEEEESC------SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCST
T ss_pred ccCCcceEEEECCEEEEEEEcCC------CCEEEEECCCCCchh-hhHHHHHHhccC-CeEEEEcCCCCCCCCCCCCCCc
Confidence 34433455677899999988763 468999999998877 667888888776 8999999999999987532
Q ss_pred cCCCcchHHHHHHHHHHHHHH-hcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRA-RHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
..++++++++|+.++++.+.. . +++++|||+||.+++.+|.++|++|+++|++++...................
T Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 152 (302)
T 1mj5_A 78 ERYAYAEHRDYLDALWEALDLGD-----RVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQ 152 (302)
T ss_dssp TSSCHHHHHHHHHHHHHHTTCTT-----CEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhCCCc-----eEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHH
Confidence 125889999999999998865 4 9999999999999999999999999999999987642211111111111111
Q ss_pred HhhhhCCCcccccCCCCC--------CCcccccHHHHHHHhhCCCCCCCcchHHHHHH-------------HHHHHHHhh
Q 035721 185 TVAWLVPTWRVVPTRGSL--------PMVSFKEEWKRKLALSSPRRPVARPRAATALE-------------LLRVSRDLQ 243 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 243 (308)
...... ..........+ ........ ....+........ ........ ......+..
T Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T 1mj5_A 153 AFRSQA-GEELVLQDNVFVEQVLPGLILRPLSEA-EMAAYREPFLAAG--EARRPTLSWPRQIPIAGTPADVVAIARDYA 228 (302)
T ss_dssp HHHSTT-HHHHHTTTCHHHHTHHHHTSSSCCCHH-HHHHHHGGGCSSS--GGGHHHHHTGGGSCBTTBSHHHHHHHHHHH
T ss_pred HHhccc-hhhhhcChHHHHHHHHHhcCcccCCHH-HHHHHHHHhhccc--ccccchHHHHHhccccccchhhHHHHHHHH
Confidence 110000 00000000000 00000111 1111111000000 00000000 111223445
Q ss_pred hhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 244 GRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..+.++++|+++++|++|.+++++..+.+.+.+ ++ +++++ ++||+++ ++|+++++.|.+++
T Consensus 229 ~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl 290 (302)
T 1mj5_A 229 GWLSESPIPKLFINAEPGALTTGRMRDFCRTWP--NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFV 290 (302)
T ss_dssp HHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCS--SE-EEEEE-EESSCGGGTCHHHHHHHHHHHH
T ss_pred hhhhccCCCeEEEEeCCCCCCChHHHHHHHHhc--CC-ceEEe-cCcCcccccCHHHHHHHHHHHH
Confidence 667889999999999999999999998888877 56 99999 9999999 99999999888763
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-33 Score=217.75 Aligned_cols=251 Identities=14% Similarity=0.113 Sum_probs=164.9
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHH-HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ-LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
...+|.+++|...+ ++|+|||+||++++.. .|. .+.+.|.++||+|+++|+||+|.|..... ++++++++
T Consensus 28 ~~~~~~~l~y~~~g------~~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~ 98 (293)
T 3hss_A 28 PEFRVINLAYDDNG------TGDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENAEG--FTTQTMVA 98 (293)
T ss_dssp TTSCEEEEEEEEEC------SSEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS--CCHHHHHH
T ss_pred cccccceEEEEEcC------CCCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCccc--CCHHHHHH
Confidence 35577889998765 2578999999998887 555 67888888899999999999999986643 58999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV 195 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|++++......... ...................
T Consensus 99 ~~~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 171 (293)
T 3hss_A 99 DTAALIETLDIA-----PARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQ--FFNKAEAELYDSGVQLPPT 171 (293)
T ss_dssp HHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHH--HHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHhcCCC-----cEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhh--HHHHHHHHHHhhcccchhh
Confidence 999999998765 999999999999999999999999999999999754321100 0000000000000000000
Q ss_pred cc----CCCCCCCcccccHHHH----HHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 196 VP----TRGSLPMVSFKEEWKR----KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 196 ~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
.. ....+........... ......... ............ ...+....+.++++|+++++|++|.+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~g~~D~~~~~~ 248 (293)
T 3hss_A 172 YDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIK--STPGLRCQLDCA-PQTNRLPAYRNIAAPVLVIGFADDVVTPPY 248 (293)
T ss_dssp HHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCC--CCHHHHHHHTSS-CSSCCHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHhhhcccccccccccHHHHHHHHhhcccc--ccHHHHhHhhhc-cccchHHHHhhCCCCEEEEEeCCCCCCCHH
Confidence 00 0000000000000000 000000000 000000000000 001223456789999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++.+.+.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 249 ~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 288 (293)
T 3hss_A 249 LGREVADAL--PNGRYLQIPDAGHLGFFERPEAVNTAMLKFF 288 (293)
T ss_dssp HHHHHHHHS--TTEEEEEETTCCTTHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHC--CCceEEEeCCCcchHhhhCHHHHHHHHHHHH
Confidence 999999998 6799999999999999 99999999887763
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=217.36 Aligned_cols=261 Identities=15% Similarity=0.131 Sum_probs=166.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccch------------HHHHHHH---HHHHcCCeEEEecCCC--CcCCC
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW------------IVQLTAV---LFAKSGFATCAIDHQG--HGFSD 101 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G--~G~s~ 101 (308)
.+|.+++|..+++.+. +.+|+|||+||++++... .|..+++ .|.+.||+|+++|+|| +|.|.
T Consensus 28 ~~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~ 106 (366)
T 2pl5_A 28 LSPVVIAYETYGTLSS-SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 106 (366)
T ss_dssp ESSEEEEEEEEECCCT-TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred ccCceeeEEeccCcCC-CCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCC
Confidence 4577999999987643 346899999999988762 4566653 4556789999999999 89887
Q ss_pred Ccccc------------CCCcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 102 GLVAH------------IPDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 102 ~~~~~------------~~~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
..... .++++++++|+.++++.+..+ ++ +++||||||.+|+.+|.++|++|+++|++++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 107 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE-----KLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAE 181 (366)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS-----SEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSB
T ss_pred CCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCc-----eEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCcc
Confidence 53210 258899999999999887665 88 8999999999999999999999999999999754
Q ss_pred CCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCC------------cccccHHHHHHHhhCC----------------
Q 035721 169 ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPM------------VSFKEEWKRKLALSSP---------------- 220 (308)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~---------------- 220 (308)
...... .........+.. .+.+........... ................
T Consensus 182 ~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (366)
T 2pl5_A 182 HSAMQI--AFNEVGRQAILS-DPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 258 (366)
T ss_dssp CCHHHH--HHHHHHHHHHHT-STTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred CCCccc--hhhHHHHHHHHh-CcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHH
Confidence 321000 000000000000 000000000000000 0000000000000000
Q ss_pred ----CCCCCcchHHHHHHHHHHHH--------HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC--CCcEEEe
Q 035721 221 ----RRPVARPRAATALELLRVSR--------DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK--DKTLSIY 286 (308)
Q Consensus 221 ----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~ 286 (308)
.................... +....+.++++|+++|+|++|.+++++.++.+.+.++.. +++++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (366)
T 2pl5_A 259 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVEL 338 (366)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEe
Confidence 00011111222222222211 233467889999999999999999999999999999422 6899999
Q ss_pred -cCCccccc-CCchhhHHHhhhcC
Q 035721 287 -PGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 287 -~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++||+++ ++|+++.+.|.+++
T Consensus 339 ~~~~gH~~~~e~p~~~~~~i~~fl 362 (366)
T 2pl5_A 339 QSGEGHDSFLLKNPKQIEILKGFL 362 (366)
T ss_dssp CCCBSSGGGGSCCHHHHHHHHHHH
T ss_pred CCCCCcchhhcChhHHHHHHHHHH
Confidence 89999999 99999999887763
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=215.65 Aligned_cols=251 Identities=15% Similarity=0.098 Sum_probs=163.4
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIPD 109 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 109 (308)
.+..++ ..+|.+++|..+++. .+|+|||+||++++.. .|..+++.|++ ||+|+++|+||+ |.|..... .++
T Consensus 45 ~~~~~v-~~~~~~~~~~~~g~~----~~~~vv~lHG~~~~~~-~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~~-~~~ 116 (306)
T 2r11_A 45 CKSFYI-STRFGQTHVIASGPE----DAPPLVLLHGALFSST-MWYPNIADWSS-KYRTYAVDIIGDKNKSIPENV-SGT 116 (306)
T ss_dssp CEEEEE-CCTTEEEEEEEESCT----TSCEEEEECCTTTCGG-GGTTTHHHHHH-HSEEEEECCTTSSSSCEECSC-CCC
T ss_pred cceEEE-ecCCceEEEEeeCCC----CCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCCCCCCCCCCCC-CCC
Confidence 344444 455668999887653 3688999999998887 56788899987 899999999999 77765433 358
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
.+++++|+.++++.++.+ +++++|||+||.+|+.+|.++|++|+++|+++|....... . ...........
T Consensus 117 ~~~~~~~l~~~l~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~--~~~~~~~~~~~ 186 (306)
T 2r11_A 117 RTDYANWLLDVFDNLGIE-----KSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPF---H--HDFYKYALGLT 186 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCC---C--HHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCCC-----ceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcc---c--HHHHHHHhHHH
Confidence 899999999999988765 9999999999999999999999999999999997654211 0 00000000000
Q ss_pred CCCcc-----cccCCCCCCCcccccHH-HHHHHhhCCCCCC-CcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCc
Q 035721 190 VPTWR-----VVPTRGSLPMVSFKEEW-KRKLALSSPRRPV-ARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDV 262 (308)
Q Consensus 190 ~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 262 (308)
..... ............+.... ...........+. ...... .......+.++++|+++++|++|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~i~~P~lii~G~~D~ 258 (306)
T 2r11_A 187 ASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFP--------YVFTDEELRSARVPILLLLGEHEV 258 (306)
T ss_dssp STTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSS--------CBCCHHHHHTCCSCEEEEEETTCC
T ss_pred HHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCC--------CCCCHHHHhcCCCCEEEEEeCCCc
Confidence 00000 00000000000000000 0000000000000 000000 001123456789999999999999
Q ss_pred ccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 263 VCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++.+.++.+... +++++++++++||+++ ++|+++.+.|.+++
T Consensus 259 ~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 304 (306)
T 2r11_A 259 IYDPHSALHRASSFV-PDIEAEVIKNAGHVLSMEQPTYVNERVMRFF 304 (306)
T ss_dssp SSCHHHHHHHHHHHS-TTCEEEEETTCCTTHHHHSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHC-CCCEEEEeCCCCCCCcccCHHHHHHHHHHHH
Confidence 999988876665432 6899999999999999 99999999888763
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=218.36 Aligned_cols=247 Identities=15% Similarity=0.128 Sum_probs=162.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc--cccCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL--VAHIP 108 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~~~ 108 (308)
++..++...+| +++|..+++ ++|+|||+||++++.. .|..+.+.|..+||+|+++|+||+|.|+.. ....+
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~-----~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 75 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG-----EGAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY 75 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC-----CEEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHS
T ss_pred eEEEEEEcCCc-eEEEEecCC-----CCCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCC
Confidence 34556666665 788877653 3678999999998887 668888886677899999999999999874 22335
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+++++++|+.++++.+... +++++|||+||.+|+.+|.++|+ +.++|++++......... ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~------------~~ 137 (279)
T 4g9e_A 76 SMEGYADAMTEVMQQLGIA-----DAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVG------------QG 137 (279)
T ss_dssp SHHHHHHHHHHHHHHHTCC-----CCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHH------------HH
T ss_pred CHHHHHHHHHHHHHHhCCC-----ceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccc------------hh
Confidence 8899999999999988665 99999999999999999999998 899998887644321100 00
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcch--------HHHHHHHHHHH-----HHhhhhcCCCCcceEE
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPR--------AATALELLRVS-----RDLQGRFEEVEVPMLI 255 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~i~~P~l~ 255 (308)
.......... .......................... ........... .+....+.++++|+++
T Consensus 138 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 213 (279)
T 4g9e_A 138 FKSGPDMALA----GQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAV 213 (279)
T ss_dssp BCCSTTGGGG----GCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEE
T ss_pred hccchhhhhc----CcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEE
Confidence 0000000000 00000000000000000000000000 00000011100 1122335678999999
Q ss_pred EeeCCCcccChHHHHHHH-HHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 256 CHGGDDVVCDPACVEELY-KRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|++|.+++++..+.+. +.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 214 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 266 (279)
T 4g9e_A 214 VNGRDEPFVELDFVSKVKFGNL--WEGKTHVIDNAGHAPFREAPAEFDAYLARFI 266 (279)
T ss_dssp EEETTCSSBCHHHHTTCCCSSB--GGGSCEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred EEcCCCcccchHHHHHHhhccC--CCCeEEEECCCCcchHHhCHHHHHHHHHHHH
Confidence 999999999999888876 555 5789999999999999 99999999888764
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-31 Score=198.61 Aligned_cols=195 Identities=22% Similarity=0.290 Sum_probs=159.5
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH--HHHHHHHcCCeEEEecCCCCcCC---CCcc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL--TAVLFAKSGFATCAIDHQGHGFS---DGLV 104 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s---~~~~ 104 (308)
..++.++ +.+|.++++..+.+.+ ++|+||++||++++.. .|.. +.+.|.++||.|+++|+||+|.| ....
T Consensus 3 ~~~~~~~-~~~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 77 (207)
T 3bdi_A 3 ALQEEFI-DVNGTRVFQRKMVTDS---NRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYG 77 (207)
T ss_dssp CCEEEEE-EETTEEEEEEEECCTT---CCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTC
T ss_pred cceeEEE-eeCCcEEEEEEEeccC---CCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCC
Confidence 3344444 4588899987777654 4789999999998887 5577 89999999999999999999999 5544
Q ss_pred ccCC-CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 105 AHIP-DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 105 ~~~~-~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
.. + +.+++++++..+++.+..+ +++++|||+||.+++.++.++|++++++|+++|.....
T Consensus 78 ~~-~~~~~~~~~~~~~~~~~~~~~-----~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------- 138 (207)
T 3bdi_A 78 ID-RGDLKHAAEFIRDYLKANGVA-----RSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES------------- 138 (207)
T ss_dssp CT-TCCHHHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-------------
T ss_pred CC-cchHHHHHHHHHHHHHHcCCC-----ceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-------------
Confidence 33 3 6777888888887766443 99999999999999999999999999999999852110
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
+ ...+.++++|+++++|++|.+
T Consensus 139 ------------------~----------------------------------------~~~~~~~~~p~l~i~g~~D~~ 160 (207)
T 3bdi_A 139 ------------------L----------------------------------------KGDMKKIRQKTLLVWGSKDHV 160 (207)
T ss_dssp ------------------G----------------------------------------HHHHTTCCSCEEEEEETTCTT
T ss_pred ------------------h----------------------------------------hHHHhhccCCEEEEEECCCCc
Confidence 0 123456789999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++..+.+.+.+ +++++++++++||..+ ++++++.+.+.+++
T Consensus 161 ~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 204 (207)
T 3bdi_A 161 VPIALSKEYASII--SGSRLEIVEGSGHPVYIEKPEEFVRITVDFL 204 (207)
T ss_dssp TTHHHHHHHHHHS--TTCEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred cchHHHHHHHHhc--CCceEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 9999999999988 6789999999999999 88998888887653
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.6e-32 Score=203.34 Aligned_cols=193 Identities=22% Similarity=0.272 Sum_probs=158.0
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH--HHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL--TAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
+..++ +.+|.+++|..+.|.++ .++|+||++||++++.. .|.. +.+.|.++||.|+++|+||+|.|...... .+
T Consensus 8 ~~~~~-~~~g~~l~~~~~~p~~~-~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~-~~ 83 (210)
T 1imj_A 8 REGTI-QVQGQALFFREALPGSG-QARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP-AP 83 (210)
T ss_dssp CCCCE-EETTEEECEEEEECSSS-CCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS-SC
T ss_pred ccceE-eeCCeEEEEEEeCCCCC-CCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc-ch
Confidence 34444 34899999999987654 46899999999998877 5566 58999999999999999999999876532 46
Q ss_pred cchHH--HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 110 LNPVV--EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 110 ~~~~~--~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
+++.+ +++..+++.+..+ +++++|||+||.+++.++.++|++++++|+++|.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~-----~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------- 141 (210)
T 1imj_A 84 IGELAPGSFLAAVVDALELG-----PPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------------- 141 (210)
T ss_dssp TTSCCCTHHHHHHHHHHTCC-----SCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------
T ss_pred hhhcchHHHHHHHHHHhCCC-----CeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-----------------
Confidence 66666 8999998887655 99999999999999999999999999999999853210
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
. ....+.++++|+++++|++|. ++.+
T Consensus 142 --------------~---------------------------------------~~~~~~~~~~p~l~i~g~~D~-~~~~ 167 (210)
T 1imj_A 142 --------------I---------------------------------------NAANYASVKTPALIVYGDQDP-MGQT 167 (210)
T ss_dssp --------------S---------------------------------------CHHHHHTCCSCEEEEEETTCH-HHHH
T ss_pred --------------c---------------------------------------cchhhhhCCCCEEEEEcCccc-CCHH
Confidence 0 012235678999999999999 9998
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
..+.+ +.+ +++++++++++||.++ ++++++.+.+.++
T Consensus 168 ~~~~~-~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 205 (210)
T 1imj_A 168 SFEHL-KQL--PNHRVLIMKGAGHPCYLDKPEEWHTGLLDF 205 (210)
T ss_dssp HHHHH-TTS--SSEEEEEETTCCTTHHHHCHHHHHHHHHHH
T ss_pred HHHHH-hhC--CCCCEEEecCCCcchhhcCHHHHHHHHHHH
Confidence 88888 666 5789999999999999 8899888888765
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-32 Score=208.06 Aligned_cols=221 Identities=15% Similarity=0.167 Sum_probs=159.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC-CcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP-DLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
++|+||++||++++.. .|..+++.|.++||+|+++|+||+|.|+....... +++++++|+.++++.+... ..+++
T Consensus 21 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~ 96 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK---YAKVF 96 (251)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT---CSEEE
T ss_pred CCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh---cCCeE
Confidence 3688999999998887 66899999999999999999999999976543333 7888899999999998863 45899
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++|||+||.+++.++.++|++++++++++|........ ............... .. .. ........
T Consensus 97 l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~-----~~~~~~~~~~~~~~~----~~-~~-----~~~~~~~~ 161 (251)
T 3dkr_A 97 VFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHL-----VPGFLKYAEYMNRLA----GK-SD-----ESTQILAY 161 (251)
T ss_dssp EEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCH-----HHHHHHHHHHHHHHH----TC-CC-----CHHHHHHH
T ss_pred EEEechHHHHHHHHHHhCccceeeEEEecchhhccchh-----hHHHHHHHHHHHhhc----cc-Cc-----chhhHHhh
Confidence 99999999999999999999999999999876533211 111111111100000 00 00 00000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC-CCCcEEEecCCccccc
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS-KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 294 (308)
.......+..........+.++++|+++++|++|.+++++.++.+.+.++. .++++++++++||.++
T Consensus 162 ------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 229 (251)
T 3dkr_A 162 ------------LPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVIT 229 (251)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTT
T ss_pred ------------hHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccc
Confidence 011111222222334566788899999999999999999999999999975 5669999999999998
Q ss_pred -CC-chhhHHHhhhcC
Q 035721 295 -GE-PEENVELVFGEM 308 (308)
Q Consensus 295 -~~-~~~~~~~i~~~i 308 (308)
+. ++++.+.+.++|
T Consensus 230 ~~~~~~~~~~~i~~fl 245 (251)
T 3dkr_A 230 VNSAHHALEEDVIAFM 245 (251)
T ss_dssp TSTTHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHH
Confidence 64 888888887763
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-33 Score=217.96 Aligned_cols=245 Identities=16% Similarity=0.119 Sum_probs=159.5
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc---cccCCCcchHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL---VAHIPDLNPVVEDAISF 120 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~ 120 (308)
++|...++ .+|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|+.. ....++++++++|+.++
T Consensus 11 l~~~~~g~-----~~p~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dnp_A 11 LNVRVVGS-----GERVLVLAHGFGTDQS-AWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHI 83 (269)
T ss_dssp TTCEEECS-----CSSEEEEECCTTCCGG-GGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHH
T ss_pred hhhhhcCC-----CCCEEEEEeCCCCcHH-HHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHH
Confidence 44555443 2579999999998887 66788888987 899999999999999762 23334889999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC--chhhhhHHHhhhhCCC---ccc
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP--WPLEHLLFTVAWLVPT---WRV 195 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~ 195 (308)
++.+..+ +++++|||+||.+|+.+|.++|++|+++|++++........... ................ +..
T Consensus 84 ~~~~~~~-----~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (269)
T 4dnp_A 84 LDALGID-----CCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVN 158 (269)
T ss_dssp HHHTTCC-----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHhcCCC-----eEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHH
Confidence 9887655 99999999999999999999999999999999875433221111 1111111110000000 000
Q ss_pred ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 196 VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.... ..... ........+...... ............. .+....+.++++|+++++|++|.+++++.++.+.
T Consensus 159 ~~~~-~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 231 (269)
T 4dnp_A 159 GFAP-LAVGA--DVPAAVREFSRTLFN----MRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLK 231 (269)
T ss_dssp HHHH-HHHCS--SCHHHHHHHHHHHHH----SCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHH
T ss_pred Hhhh-hhccC--CChhHHHHHHHHHHc----cCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHH
Confidence 0000 00000 000000000000000 0001111111111 2334567788999999999999999999999999
Q ss_pred HHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 274 KRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 274 ~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+++ .+++++++++||+++ ++|+++++.|.+++
T Consensus 232 ~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 266 (269)
T 4dnp_A 232 NHLGG-KNTVHWLNIEGHLPHLSAPTLLAQELRRAL 266 (269)
T ss_dssp HHSSS-CEEEEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred HhCCC-CceEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 99842 289999999999999 99999999888763
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=212.96 Aligned_cols=264 Identities=15% Similarity=0.095 Sum_probs=158.4
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
+..++...+|.+++|..+++++ .++|||+||++++.... .+...+...||+|+++|+||||.|+.... ..+++
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~----g~~vvllHG~~~~~~~~--~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 88 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPN----GKPAVFIHGGPGGGISP--HHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTT 88 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTT----SEEEEEECCTTTCCCCG--GGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSH
T ss_pred eeeEEEcCCCcEEEEEEcCCCC----CCcEEEECCCCCcccch--hhhhhccccCCeEEEECCCCCCCCCCCcccccccH
Confidence 4456667789999999887543 46799999987654311 12233434689999999999999976432 23578
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC------CCCchhhhhHH
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF------KPPWPLEHLLF 184 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~ 184 (308)
+++++|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++........ ...........
T Consensus 89 ~~~~~dl~~l~~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (317)
T 1wm1_A 89 WHLVADIERLREMAGVE-----QWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWE 163 (317)
T ss_dssp HHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-----cEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHH
Confidence 88999999999988766 99999999999999999999999999999998754321000 00000000000
Q ss_pred HhhhhCCCcccccCCCCCCCccc-ccHHHH----H---HHhhCCCCCCCcc--------hHHHHHH-HHHHH--------
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSF-KEEWKR----K---LALSSPRRPVARP--------RAATALE-LLRVS-------- 239 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~---~~~~~~~~~~~~~--------~~~~~~~-~~~~~-------- 239 (308)
......+..........+..... .+.... . ............. ....... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 1wm1_A 164 RVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLE 243 (317)
T ss_dssp HHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCS
T ss_pred HHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccc
Confidence 00000000000000000000000 000000 0 0000100000000 0000000 00000
Q ss_pred -HH-hhhhcCCCC-cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C-CchhhHHHhhhcC
Q 035721 240 -RD-LQGRFEEVE-VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G-EPEENVELVFGEM 308 (308)
Q Consensus 240 -~~-~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~-~~~~~~~~i~~~i 308 (308)
.. ....+.+++ +|+++|+|++|.+++++.++.+.+.+ +++++++++++||+++ + .++++.+.+.+++
T Consensus 244 ~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~--p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 244 SDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSYDEPGILHQLMIATDRFA 315 (317)
T ss_dssp STTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTTSHHHHHHHHHHHHHHT
T ss_pred cchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC--CCceEEEECCCCCCCCCcchHHHHHHHHHHHh
Confidence 01 233456674 99999999999999999999999998 6899999999999987 3 5777777776653
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-30 Score=192.70 Aligned_cols=199 Identities=19% Similarity=0.169 Sum_probs=159.9
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---Cc-cchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GE-SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
+..+...+.+.+| ++.+..+.|.+. .++|+||++||++ +. ...+|..+++.|.++||.|+++|+||+|.|....
T Consensus 4 ~~~~~~~~~~~~g-~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 81 (208)
T 3trd_A 4 MTNEDFLIQGPVG-QLEVMITRPKGI-EKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRY 81 (208)
T ss_dssp CSSSCEEEECSSS-EEEEEEECCSSC-CCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred cccceEEEECCCc-eEEEEEEcCCCC-CCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCc
Confidence 3456778889999 999999888653 4689999999942 22 2335688999999999999999999999997653
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
. ......+|+.++++++.... +..+++++|||+||.+++.++ .+| +++++|++++.....
T Consensus 82 ~---~~~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~-------------- 141 (208)
T 3trd_A 82 D---NGVGEVEDLKAVLRWVEHHW-SQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE-------------- 141 (208)
T ss_dssp C---TTTHHHHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG--------------
T ss_pred c---chHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC--------------
Confidence 2 34567889999999988764 456999999999999999999 777 899999999864100
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCccc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 264 (308)
+ ...+..+++|+++++|++|.++
T Consensus 142 --------------------------------------------------------~-~~~~~~~~~p~l~i~g~~D~~~ 164 (208)
T 3trd_A 142 --------------------------------------------------------G-FASLTQMASPWLIVQGDQDEVV 164 (208)
T ss_dssp --------------------------------------------------------G-GTTCCSCCSCEEEEEETTCSSS
T ss_pred --------------------------------------------------------C-chhhhhcCCCEEEEECCCCCCC
Confidence 0 0234456899999999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
+++.++.+.+.++. ++++++++++||.+..+.+++.+.+.++
T Consensus 165 ~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~i~~f 206 (208)
T 3trd_A 165 PFEQVKAFVNQISS-PVEFVVMSGASHFFHGRLIELRELLVRN 206 (208)
T ss_dssp CHHHHHHHHHHSSS-CCEEEEETTCCSSCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccC-ceEEEEeCCCCCcccccHHHHHHHHHHH
Confidence 99999999999853 3899999999999984457788877765
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=204.02 Aligned_cols=240 Identities=14% Similarity=0.129 Sum_probs=161.3
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
|.+++|..+++++ ++|+||++||++++.. .|. +.+.|. +||+|+++|+||+|.|+... .++++++++|+.++
T Consensus 2 g~~l~y~~~g~~~---~~~~vv~~hG~~~~~~-~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~ 73 (245)
T 3e0x_A 2 NAMLHYVHVGNKK---SPNTLLFVHGSGCNLK-IFG-ELEKYL-EDYNCILLDLKGHGESKGQC--PSTVYGYIDNVANF 73 (245)
T ss_dssp CCCCCEEEEECTT---CSCEEEEECCTTCCGG-GGT-TGGGGC-TTSEEEEECCTTSTTCCSCC--CSSHHHHHHHHHHH
T ss_pred CceeEEEecCCCC---CCCEEEEEeCCcccHH-HHH-HHHHHH-hCCEEEEecCCCCCCCCCCC--CcCHHHHHHHHHHH
Confidence 5678888887653 3789999999999887 555 777776 68999999999999998433 34888899999888
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR 199 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (308)
++.......-. +++++|||+||.+++.++.+ +|+ |+++|++++....... .......+.............
T Consensus 74 ~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T 3e0x_A 74 ITNSEVTKHQK-NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKL------DKDFMEKIYHNQLDNNYLLEC 145 (245)
T ss_dssp HHHCTTTTTCS-CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTS------CHHHHHHHHTTCCCHHHHHHH
T ss_pred HHhhhhHhhcC-ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccc------cHHHHHHHHHHHHHhhcCccc
Confidence 84332221122 89999999999999999999 999 9999999997654211 111111111110000000000
Q ss_pred CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 200 GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
. ......... ........ ........... ..+....+.++++|+++++|++|.+++++.++.+.+.+
T Consensus 146 ---~-~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~- 214 (245)
T 3e0x_A 146 ---I-GGIDNPLSE-KYFETLEK-----DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV- 214 (245)
T ss_dssp ---H-TCSCSHHHH-HHHTTSCS-----SHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-
T ss_pred ---c-cccchHHHH-HHHHHHhc-----CcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc-
Confidence 0 000011111 11111111 11111111111 12334567888999999999999999999999999998
Q ss_pred CCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 278 SKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 278 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++++++++||+++ ++|+++.+.|.++|
T Consensus 215 -~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 215 -ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp -SSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred -CCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 6799999999999999 99999999998875
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=210.05 Aligned_cols=226 Identities=15% Similarity=0.088 Sum_probs=164.3
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
+...+.. +|.++.+..+.|. +.|+||++||++++.. .|..+++.|.++||.|+++|+||+|.|...... ++..
T Consensus 7 ~~~~~~~-~g~~l~~~~~~p~----~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~-~~~~ 79 (290)
T 3ksr_A 7 SSIEIPV-GQDELSGTLLTPT----GMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEGYASMRQS-VTRA 79 (290)
T ss_dssp EEEEEEE-TTEEEEEEEEEEE----SEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTT-CBHH
T ss_pred eeEEecC-CCeEEEEEEecCC----CCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCCCCCCccc-ccHH
Confidence 3344544 7889999999886 4899999999998887 668899999999999999999999999875443 4788
Q ss_pred hHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 112 PVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
.+++|+.++++++....+ +..+++++|||+||.+++.++.++| ++++++++|............... . . .
T Consensus 80 ~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~---~-~---~ 150 (290)
T 3ksr_A 80 QNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSL---N-A---D 150 (290)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHH---H-H---S
T ss_pred HHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccc---c-C---C
Confidence 899999999999976532 3458999999999999999999988 899999988654332111100000 0 0 0
Q ss_pred CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHH
Q 035721 191 PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVE 270 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 270 (308)
. ....+......... ......+.++++|+++++|++|.+++++..+
T Consensus 151 ~--------------------~~~~~~~~~~~~~~--------------~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~ 196 (290)
T 3ksr_A 151 P--------------------DLMDYRRRALAPGD--------------NLALAACAQYKGDVLLVEAENDVIVPHPVMR 196 (290)
T ss_dssp T--------------------THHHHTTSCCCGGG--------------CHHHHHHHHCCSEEEEEEETTCSSSCHHHHH
T ss_pred h--------------------hhhhhhhhhhhhcc--------------ccHHHHHHhcCCCeEEEEecCCcccChHHHH
Confidence 0 00000000000000 1122334567899999999999999999999
Q ss_pred HHHHHhcCC-CCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 271 ELYKRAASK-DKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 271 ~~~~~~~~~-~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
.+.+.++.. ++++++++++||.+. +.++++.+.+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 236 (290)
T 3ksr_A 197 NYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDW 236 (290)
T ss_dssp HHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHH
Confidence 999998532 256999999999876 4777777777665
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=197.10 Aligned_cols=202 Identities=20% Similarity=0.212 Sum_probs=159.7
Q ss_pred ccccc--ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc----hHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 28 SVSHS--SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS----WIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 28 ~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
+.+++ +..+.+.+| ++.+..+.|.+ .++|+||++||+++... ..|..+++.|+++||.|+++|+||+|.|.
T Consensus 18 ~~~~e~~~~~~~~~~g-~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 94 (249)
T 2i3d_A 18 YFQGHMPEVIFNGPAG-RLEGRYQPSKE--KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQ 94 (249)
T ss_dssp ------CEEEEEETTE-EEEEEEECCSS--TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCC
T ss_pred cccCceeEEEEECCCc-eEEEEEEcCCC--CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCC
Confidence 44455 888888888 89988887754 45789999999853322 34578999999999999999999999998
Q ss_pred CccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 102 GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 102 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
..... ..... +|+.++++++.....+..+++++|||+||.+++.++.++|+ ++++|++++......
T Consensus 95 ~~~~~--~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---------- 160 (249)
T 2i3d_A 95 GEFDH--GAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---------- 160 (249)
T ss_dssp SCCCS--SHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----------
T ss_pred CCCCC--ccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----------
Confidence 75432 34444 99999999998763244589999999999999999999998 999999998643110
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
...+.++++|+++++|++|
T Consensus 161 -------------------------------------------------------------~~~~~~~~~P~lii~G~~D 179 (249)
T 2i3d_A 161 -------------------------------------------------------------FSFLAPCPSSGLIINGDAD 179 (249)
T ss_dssp -------------------------------------------------------------CTTCTTCCSCEEEEEETTC
T ss_pred -------------------------------------------------------------hhhhcccCCCEEEEEcCCC
Confidence 1224567899999999999
Q ss_pred cccChHHHHHHHHHhcCC---CCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 262 VVCDPACVEELYKRAASK---DKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
.+++.+.++.+.+.++.+ ++++++++++||.+.++++++.+.+.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~i~~f 228 (249)
T 2i3d_A 180 KVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDY 228 (249)
T ss_dssp SSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccccCHHHHHHHHHHH
Confidence 999999999999998531 7899999999999888888888887765
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=210.69 Aligned_cols=125 Identities=14% Similarity=0.099 Sum_probs=100.0
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
+..++...+|.+++|..+++++ .++|||+||++++.. ++ .+...+..+||+|+++|+||||.|+.... ..+++
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~----g~pvvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 85 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPH----GKPVVMLHGGPGGGC-ND-KMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTT 85 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT----SEEEEEECSTTTTCC-CG-GGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCH
T ss_pred ccceEEcCCCCEEEEEecCCCC----CCeEEEECCCCCccc-cH-HHHHhcCcCcceEEEECCCCCcCCCCCcccccccH
Confidence 4556766789999999887543 467999999876543 21 22333444689999999999999986432 23578
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++++|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 86 ~~~~~dl~~l~~~l~~~-----~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 86 WDLVADIERLRTHLGVD-----RWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCC-----ceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 89999999999988766 99999999999999999999999999999998753
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-33 Score=214.13 Aligned_cols=231 Identities=16% Similarity=0.191 Sum_probs=137.8
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+|||+||++++.. .|..+++.|.+.||+|+++|+||||.|+.... ++++++++|+.++++.+... ..+++++
T Consensus 16 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~--~~~~~~a~~l~~~l~~l~~~---~~p~~lv 89 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHC--DNFAEAVEMIEQTVQAHVTS---EVPVILV 89 (264)
T ss_dssp BCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC---------CHHHHHHHHHHHTTCCT---TSEEEEE
T ss_pred CCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCCc--cCHHHHHHHHHHHHHHhCcC---CCceEEE
Confidence 488999999999887 67899999975689999999999999986433 47899999999999887654 1139999
Q ss_pred EechhhHHHHH---HHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC--CCccc--ccCCCCCCCcccccH
Q 035721 138 SESLGGAIALY---ITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV--PTWRV--VPTRGSLPMVSFKEE 210 (308)
Q Consensus 138 G~S~Gg~~a~~---~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~ 210 (308)
||||||.+|+. +|.++|++|+++|++++......................... +.... .......... . ..
T Consensus 90 GhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 167 (264)
T 1r3d_A 90 GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSS-L-NH 167 (264)
T ss_dssp EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTT-C-CH
T ss_pred EECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhc-c-CH
Confidence 99999999999 888999999999999875432210000000000000000000 00000 0000000000 0 01
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHH-----HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEE
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVS-----RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (308)
............ ... .......... .+..+.+.++++|+++|+|++|..++ .+.+.+ . +++++
T Consensus 168 ~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~-~~~~~ 235 (264)
T 1r3d_A 168 EQRQTLIAQRSA---NLG-SSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS--G-LSYSQ 235 (264)
T ss_dssp HHHHHHHHHHTT---SCH-HHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH--C-SEEEE
T ss_pred HHHHHHHHHHhh---cch-HHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh--C-CcEEE
Confidence 111111100000 000 0111111110 12234467889999999999998652 344444 2 68999
Q ss_pred ecCCccccc-CCchhhHHHhhhcC
Q 035721 286 YPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 286 ~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++||+++ ++|+++++.|.+++
T Consensus 236 i~~~gH~~~~e~p~~~~~~i~~fl 259 (264)
T 1r3d_A 236 VAQAGHNVHHEQPQAFAKIVQAMI 259 (264)
T ss_dssp ETTCCSCHHHHCHHHHHHHHHHHH
T ss_pred cCCCCCchhhcCHHHHHHHHHHHH
Confidence 999999999 99999999887753
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=222.91 Aligned_cols=254 Identities=13% Similarity=0.041 Sum_probs=163.4
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccch--HHHHHHH---HHHHcCCeEEEecCCC--CcCCCCcc-----c--
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--IVQLTAV---LFAKSGFATCAIDHQG--HGFSDGLV-----A-- 105 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~---~l~~~g~~v~~~d~~G--~G~s~~~~-----~-- 105 (308)
+|.+++|..+++.++ ...|+|||+||++++... +|..++. .|..+||+|+++|+|| +|.|.... .
T Consensus 92 ~g~~l~y~~~G~~~~-~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~ 170 (444)
T 2vat_A 92 RDVPVAYKSWGRMNV-SRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQ 170 (444)
T ss_dssp EEEEEEEEEESCCCT-TSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--
T ss_pred cceeEEEEEecCCCC-CCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccc
Confidence 456789999887543 336899999999998873 2666664 4656789999999999 68886411 0
Q ss_pred -------cCCCcchHHHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 106 -------HIPDLNPVVEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 106 -------~~~~~~~~~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
..++++++++|+.++++.++.+ + ++++||||||.+|+.+|.++|++|+++|++++......... .
T Consensus 171 ~~~~~~f~~~t~~~~a~dl~~ll~~l~~~-----~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~--~ 243 (444)
T 2vat_A 171 RPYGAKFPRTTIRDDVRIHRQVLDRLGVR-----QIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCA--A 243 (444)
T ss_dssp CBCGGGCCCCCHHHHHHHHHHHHHHHTCC-----CEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHH--H
T ss_pred cccccccccccHHHHHHHHHHHHHhcCCc-----cceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccch--h
Confidence 0258899999999999998766 7 99999999999999999999999999999998754321000 0
Q ss_pred hhhhhHHHhhhhCCCccc--------------------------------ccCCCCCC----------------------
Q 035721 178 PLEHLLFTVAWLVPTWRV--------------------------------VPTRGSLP---------------------- 203 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~---------------------- 203 (308)
........+. ..+.+.. .... ...
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (444)
T 2vat_A 244 WFETQRQCIY-DDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHM-APGVQAGRNISSQDAKKEINGTDSG 321 (444)
T ss_dssp HHHHHHHHHH-HSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCC-CCCCC--------------------
T ss_pred HHHHHHHHHh-cCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhcc-Ccccccccccccccccccccccccc
Confidence 0000000000 0000000 0000 000
Q ss_pred ------CcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH----------HhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 204 ------MVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR----------DLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 204 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
...+............. ................. +....+.++++|+|+|+|++|.+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~ 398 (444)
T 2vat_A 322 NSHRAGQPIEAVSSYLRYQAQKF---AASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD 398 (444)
T ss_dssp -------CGGGHHHHHHHHHHHH---HHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH
T ss_pred ccccccCchhhHHHHHHHHHHHH---hhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHH
Confidence 00000000000000000 00000011111111111 134557889999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEec-CCccccc-CCchhhHHHhhhcC
Q 035721 268 CVEELYKRAASKDKTLSIYP-GMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++.+.+.+ +++++++++ ++||+++ ++|+++++.|.+++
T Consensus 399 ~~~~l~~~~--p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL 439 (444)
T 2vat_A 399 EHVEMGRSI--PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFL 439 (444)
T ss_dssp HHHHHHHHS--TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHC--CCcEEEEeCCCCCcchHHhCHHHHHHHHHHHH
Confidence 999999998 689999999 9999999 99999999888763
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=209.27 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=155.6
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc---cCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA---HIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
+|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|..... ...+++++++|+.++++.+... ++
T Consensus 28 ~~~vv~lHG~~~~~~-~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 100 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN-MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLV-----NV 100 (282)
T ss_dssp SCEEEEECCTTCCGG-GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCC-----SE
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCC-----ce
Confidence 478999999998887 66789999987 89999999999999987652 2237888999999999887655 99
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC---CCchhhhhHHHhhhhCCC---cc----cccCCCCCCC
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK---PPWPLEHLLFTVAWLVPT---WR----VVPTRGSLPM 204 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~ 204 (308)
+++|||+||.+|+.++.++|++++++|++++......... .................. +. ..... ....
T Consensus 101 ~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 179 (282)
T 3qvm_A 101 SIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMG-ASHS 179 (282)
T ss_dssp EEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC-TTSC
T ss_pred EEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccC-Cccc
Confidence 9999999999999999999999999999998765432210 000011111000000000 00 00000 0000
Q ss_pred cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCc
Q 035721 205 VSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKT 282 (308)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 282 (308)
..... ......... .......+... ..+....+.++++|+++++|++|.+++++.++.+.+.+ ++++
T Consensus 180 ~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~ 248 (282)
T 3qvm_A 180 SELIG-ELSGSFCTT--------DPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI--PNSQ 248 (282)
T ss_dssp HHHHH-HHHHHHHHS--------CHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHS--SSEE
T ss_pred hhhHH-HHHHHHhcC--------CcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhC--CCCc
Confidence 00000 000000000 00011111111 11233557788999999999999999999999999998 6789
Q ss_pred EEEecCCccccc-CCchhhHHHhhhcC
Q 035721 283 LSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 283 ~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++++||+++ ++|+++.+.|.+++
T Consensus 249 ~~~~~~~gH~~~~~~~~~~~~~i~~fl 275 (282)
T 3qvm_A 249 LELIQAEGHCLHMTDAGLITPLLIHFI 275 (282)
T ss_dssp EEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred EEEecCCCCcccccCHHHHHHHHHHHH
Confidence 999999999999 99999999887753
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-33 Score=220.58 Aligned_cols=256 Identities=12% Similarity=0.014 Sum_probs=159.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc----ccCCCcc
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV----AHIPDLN 111 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----~~~~~~~ 111 (308)
+.+.+|.+++|...+ ++|+|||+||++++.. .|..+++.|. +||+|+++|+||||.|+.+. ...++++
T Consensus 9 ~~~~~g~~~~~~~~g------~~p~vv~lHG~~~~~~-~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (304)
T 3b12_A 9 LVDVGDVTINCVVGG------SGPALLLLHGFPQNLH-MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFR 80 (304)
Confidence 335588899998765 2578999999998877 6788999997 68999999999999998763 3346889
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh-hhHH------
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE-HLLF------ 184 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~------ 184 (308)
++++|+.++++.+..+ +++++|||+||.+++.+|.++|++|+++|++++............... ....
T Consensus 81 ~~~~~l~~~l~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
T 3b12_A 81 AMASDQRELMRTLGFE-----RFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQ 155 (304)
Confidence 9999999999998776 999999999999999999999999999999998754322111000000 0000
Q ss_pred ---HhhhhCCCcccccCCCC-CCCcccccHH-HHHHHhhCCC-CCCCcchHHHHHHHHHHH------HHhhhhcCCCCcc
Q 035721 185 ---TVAWLVPTWRVVPTRGS-LPMVSFKEEW-KRKLALSSPR-RPVARPRAATALELLRVS------RDLQGRFEEVEVP 252 (308)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P 252 (308)
............... . +......... .......... ..............+... ......+.++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 234 (304)
T 3b12_A 156 PAPYPEKVIGADPDTFYE-GCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCP 234 (304)
Confidence 000000000000000 0 0000000000 0000000000 000000001111111100 1111126788999
Q ss_pred eEEEeeCCCccc-ChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 253 MLICHGGDDVVC-DPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 253 ~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|+|++|..+ +....+.+.+.. ++++++++ ++||+++ ++|+++++.|.+++
T Consensus 235 ~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 289 (304)
T 3b12_A 235 ALVFSGSAGLMHSLFEMQVVWAPRL--ANMRFASL-PGGHFFVDRFPDDTARILREFL 289 (304)
Confidence 999999999554 555666666665 57888999 9999999 99999999888764
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-31 Score=214.03 Aligned_cols=259 Identities=12% Similarity=0.061 Sum_probs=163.1
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccch--------HHHHHHH---HHHHcCCeEEEecCCC-CcCCCCccc-
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--------IVQLTAV---LFAKSGFATCAIDHQG-HGFSDGLVA- 105 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--------~~~~~~~---~l~~~g~~v~~~d~~G-~G~s~~~~~- 105 (308)
.+|.+++|..+++.+. ...|+|||+||++++... +|..+++ .|.+.||+|+++|+|| +|.|+.+..
T Consensus 41 ~~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~ 119 (377)
T 2b61_A 41 LSYINVAYQTYGTLND-EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSI 119 (377)
T ss_dssp ECSEEEEEEEESCCCT-TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSB
T ss_pred ecceeEEEEecccccc-cCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCccc
Confidence 4677899998886542 235899999999998874 2677764 3756799999999999 688875421
Q ss_pred ------------cCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 106 ------------HIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 106 ------------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
..++++++++|+.++++.+... +++ |+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 194 (377)
T 2b61_A 120 NPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS-----HLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAE 194 (377)
T ss_dssp CTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC-----CEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHH
T ss_pred CccccccccccCCcccHHHHHHHHHHHHHHcCCc-----ceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcccccc
Confidence 0358899999999999887665 887 9999999999999999999999999999986542210
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCC-CCCCCccc-----------cc-HHHHHHHhhCCCC-----------------
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTR-GSLPMVSF-----------KE-EWKRKLALSSPRR----------------- 222 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------~~-~~~~~~~~~~~~~----------------- 222 (308)
. ..........+. ..+.+...... ........ .. ......+......
T Consensus 195 ~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (377)
T 2b61_A 195 A--IGFNHVMRQAVI-NDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSY 271 (377)
T ss_dssp H--HHHHHHHHHHHH-TSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHH
T ss_pred c--hhHHHHHHHHHh-cCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHh
Confidence 0 000000000000 00000000000 00000000 00 0000000000000
Q ss_pred ----CCCcchHHHHHHHHHHHH---------HhhhhcCCCCcceEEEeeCCCcccCh----HHHHHHHHHhcCCCCcEEE
Q 035721 223 ----PVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHGGDDVVCDP----ACVEELYKRAASKDKTLSI 285 (308)
Q Consensus 223 ----~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~ 285 (308)
.................. +....+.++++|+++|+|++|.++++ +.++.+.+.+ +++++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~ 349 (377)
T 2b61_A 272 QGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG--VDLHFYE 349 (377)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred hhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcC--CCceEEE
Confidence 000000111111111111 12456788999999999999999999 7788888777 6789999
Q ss_pred ec-CCccccc-CCchhhHHHhhhcC
Q 035721 286 YP-GMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 286 ~~-~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++ ++||+++ ++|+++++.|.+++
T Consensus 350 i~~~~gH~~~~e~p~~~~~~i~~fl 374 (377)
T 2b61_A 350 FPSDYGHDAFLVDYDQFEKRIRDGL 374 (377)
T ss_dssp ECCTTGGGHHHHCHHHHHHHHHHHH
T ss_pred eCCCCCchhhhcCHHHHHHHHHHHH
Confidence 99 9999999 99999999888763
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=205.75 Aligned_cols=255 Identities=15% Similarity=0.087 Sum_probs=154.1
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc----CCCc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH----IPDL 110 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~ 110 (308)
.+...+|.+++|...+. .++|||+||++++.. .|+.+.+.|.+ +|+|+++|+||||.|+.+... .++.
T Consensus 8 ~~~~~~~~~~~~~~~g~------g~~~vllHG~~~~~~-~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~ 79 (291)
T 3qyj_A 8 TIVDTTEARINLVKAGH------GAPLLLLHGYPQTHV-MWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSK 79 (291)
T ss_dssp EEEECSSCEEEEEEECC------SSEEEEECCTTCCGG-GGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSH
T ss_pred eEEecCCeEEEEEEcCC------CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCH
Confidence 44567899999987652 467999999998877 67888888865 699999999999999875432 2578
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc-hhhhhHHHhhhh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW-PLEHLLFTVAWL 189 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 189 (308)
+.+++|+.++++.+... +++++||||||.+|+.+|.++|++|+++|++++............ ............
T Consensus 80 ~~~~~~~~~~~~~l~~~-----~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 154 (291)
T 3qyj_A 80 RVMAQDQVEVMSKLGYE-----QFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLI 154 (291)
T ss_dssp HHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTT
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhc
Confidence 88899999998887665 999999999999999999999999999999986432110000000 000000000000
Q ss_pred CCC-cccc--cCC----------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH------HHHhhhhcCCCC
Q 035721 190 VPT-WRVV--PTR----------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV------SRDLQGRFEEVE 250 (308)
Q Consensus 190 ~~~-~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~ 250 (308)
.+. .... ... ..........+.....+.... ............++. ..+....+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 231 (291)
T 3qyj_A 155 QPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCF---SQPAVIHATCEDYRAAATIDLEHDELDMKQKIS 231 (291)
T ss_dssp CSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHH---TSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBC
T ss_pred cCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHh---cCCCcchhHHHHHHcccccchhhcchhcCCccc
Confidence 000 0000 000 000000000001111110000 000001111111111 112223467899
Q ss_pred cceEEEeeCCCcccCh-HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDP-ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++|+|++|.+.+. .....+.+.. ++++..+++ +||+++ |+|+++++.|.+++
T Consensus 232 ~P~Lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL 288 (291)
T 3qyj_A 232 CPVLVLWGEKGIIGRKYDVLATWRERA--IDVSGQSLP-CGHFLPEEAPEETYQAIYNFL 288 (291)
T ss_dssp SCEEEEEETTSSHHHHSCHHHHHHTTB--SSEEEEEES-SSSCHHHHSHHHHHHHHHHHH
T ss_pred cceEEEecccccccchhhHHHHHHhhc--CCcceeecc-CCCCchhhCHHHHHHHHHHHH
Confidence 9999999999976532 2233333333 567888886 999999 99999999998763
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=185.46 Aligned_cols=198 Identities=17% Similarity=0.155 Sum_probs=157.9
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCC-CCcceEEEEccCC---Cc-cchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFT---GE-SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~-~~~~~vv~~hG~~---~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
..+...+.+.+| ++.+..+.|.+.. .++|+||++||++ +. ....|..+++.|+++||.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 345667888888 8888888876541 3489999999953 22 2235678999999999999999999999998654
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
. .....++|+.++++++.... +..+++++|||+||.+++.++.++ +++++|++++......
T Consensus 88 ~---~~~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------- 148 (220)
T 2fuk_A 88 D---HGDGEQDDLRAVAEWVRAQR-PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------- 148 (220)
T ss_dssp C---TTTHHHHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------------
T ss_pred c---cCchhHHHHHHHHHHHHhcC-CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------------
Confidence 2 34677899999999998874 556999999999999999999988 7999999998654321
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCccc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 264 (308)
...+. ..+|+++++|++|.++
T Consensus 149 ----------------------------------------------------------~~~~~-~~~p~l~i~g~~D~~~ 169 (220)
T 2fuk_A 149 ----------------------------------------------------------FSDVQ-PPAQWLVIQGDADEIV 169 (220)
T ss_dssp ----------------------------------------------------------CTTCC-CCSSEEEEEETTCSSS
T ss_pred ----------------------------------------------------------hhhcc-cCCcEEEEECCCCccc
Confidence 00111 2579999999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
+.+.++.+.+.+. +++++++++++||.+..+++++.+.+.++
T Consensus 170 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~i~~~ 211 (220)
T 2fuk_A 170 DPQAVYDWLETLE-QQPTLVRMPDTSHFFHRKLIDLRGALQHG 211 (220)
T ss_dssp CHHHHHHHHTTCS-SCCEEEEETTCCTTCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-cCCcEEEeCCCCceehhhHHHHHHHHHHH
Confidence 9999999998885 57999999999999885577777777654
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=206.53 Aligned_cols=231 Identities=13% Similarity=0.006 Sum_probs=146.2
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
..+++|||+||++++.. .|..+.+.|.++ ||+|+++|+||||.|..+.. ++++++++++.++++.+ .. +
T Consensus 34 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~l~~~~~~~-~~-----~ 104 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKA-PQ-----G 104 (302)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHC-TT-----C
T ss_pred CCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH--HHHHHHHHHHHHHhhcC-CC-----c
Confidence 34788999999998887 678999999998 89999999999999876543 25666677777766655 33 9
Q ss_pred EEEEEechhhHHHHHHHHhcCC-CccEEEEeCCcCCCCcCCCCCchhhhh-----HHHh-hhhCCCcccccCCCCCCCcc
Q 035721 134 AFLYSESLGGAIALYITLRQKG-AWDGLILNGAMCGISQKFKPPWPLEHL-----LFTV-AWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~ 206 (308)
++++||||||.+|+.++.++|+ +|+++|++++........ ....... .... ........... .....
T Consensus 105 ~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 178 (302)
T 1pja_A 105 VHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD--TDYLKWLFPTSMRSNLYRICYSPWGQEF----SICNY 178 (302)
T ss_dssp EEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC--CHHHHHHCTTCCHHHHHHHHTSTTGGGS----TGGGG
T ss_pred EEEEEECHHHHHHHHHHHhcCccccCEEEEECCCccccccc--chhhhhHHHHHHHHHHhhccchHHHHHh----hhhhc
Confidence 9999999999999999999999 799999999865432111 0000000 0000 00000000000 00000
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHH--HHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc-------
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALEL--LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA------- 277 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~------- 277 (308)
+.++.....+.... ......... .....+..+.+.+++ |+++++|++|.+++++.++.+.+..+
T Consensus 179 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 1pja_A 179 WHDPHHDDLYLNAS------SFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEM 251 (302)
T ss_dssp BCCTTCHHHHHHHC------SSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECG
T ss_pred ccChhhhhhhhccc------hHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccch
Confidence 00000000000000 000000000 000012355678899 99999999999999888776643321
Q ss_pred ------------------CCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 278 ------------------SKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 278 ------------------~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..++++++++++||+++ ++|+++.+.|.+++
T Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 252 EEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp GGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred hhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 12389999999999999 99999999998875
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-30 Score=193.30 Aligned_cols=201 Identities=17% Similarity=0.171 Sum_probs=157.1
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc-
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH- 106 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 106 (308)
+..+...+.. +|.++.+..+.|.+ ++|+||++||++++... .+..+++.|.++||.|+++|+||+|.|......
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~---~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 85 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG---ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTR 85 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT---CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHC
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC---CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhh
Confidence 3344555654 88899999988765 48999999999987763 346788999999999999999999988654321
Q ss_pred --CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 107 --IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 107 --~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
..+++++++|+.++++++..... +..+++++|||+||.+++.++.++|++++++|++++.....
T Consensus 86 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------- 152 (223)
T 2o2g_A 86 HLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------- 152 (223)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------
T ss_pred cccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------
Confidence 14788889999999999987643 56699999999999999999999999999999999842210
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
...+.++++|+++++|++|.+
T Consensus 153 -----------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~ 173 (223)
T 2o2g_A 153 -----------------------------------------------------------PSALPHVKAPTLLIVGGYDLP 173 (223)
T ss_dssp -----------------------------------------------------------TTTGGGCCSCEEEEEETTCHH
T ss_pred -----------------------------------------------------------HHHHhcCCCCEEEEEccccCC
Confidence 123456789999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
++.+..+.+ +... +++++++++++||.+. +.++++.+.+.++
T Consensus 174 ~~~~~~~~~-~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 217 (223)
T 2o2g_A 174 VIAMNEDAL-EQLQ-TSKRLVIIPRASHLFEEPGALTAVAQLASEW 217 (223)
T ss_dssp HHHHHHHHH-HHCC-SSEEEEEETTCCTTCCSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHH-HhhC-CCeEEEEeCCCCcccCChHHHHHHHHHHHHH
Confidence 975554444 4433 5789999999999976 3357777777665
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=203.65 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=94.7
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
.+++|...+. .+|+|||+||++++.. .|..+++.|.+ .+|+|+++|+||||.|+......++++++++|+.++
T Consensus 27 ~~~~~~~~g~-----~~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~ 100 (316)
T 3c5v_A 27 DTFRVYKSGS-----EGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNV 100 (316)
T ss_dssp EEEEEEEECS-----SSCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHH
T ss_pred EEEEEEecCC-----CCcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHH
Confidence 3677766542 2578999999987776 67889999976 269999999999999987544446899999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCc
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAM 166 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~ 166 (308)
++.+... ...+++|+||||||.+|+.+|.+ +|+ |+++|++++.
T Consensus 101 l~~l~~~--~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 101 VEAMYGD--LPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp HHHHHTT--CCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred HHHHhcc--CCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 9999532 11389999999999999999986 566 9999999874
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=189.93 Aligned_cols=190 Identities=16% Similarity=0.128 Sum_probs=153.7
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc------
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA------ 105 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------ 105 (308)
+...+.+.+|.++.+..+.|.+ .++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~--~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK--APAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS--CSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred ceEEEecCCCCeEEEEEECCCC--CCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 4567778899999999988864 45899999999998877 66889999999999999999999998865211
Q ss_pred --------cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 106 --------HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 106 --------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
...+.+..++|+.++++++........+++++|||+||.+++.++.++| +++++++.+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~-------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE-------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG--------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc--------
Confidence 1235677789999999999854210249999999999999999999998 9999988763110
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEe
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 257 (308)
+....+.++++|+++++
T Consensus 151 ---------------------------------------------------------------~~~~~~~~~~~P~l~i~ 167 (236)
T 1zi8_A 151 ---------------------------------------------------------------KQLNKVPEVKHPALFHM 167 (236)
T ss_dssp ---------------------------------------------------------------GCGGGGGGCCSCEEEEE
T ss_pred ---------------------------------------------------------------cchhhhhhcCCCEEEEe
Confidence 11234567789999999
Q ss_pred eCCCcccChHHHHHHHHHhcC-CCCcEEEecCCccccc-CCc
Q 035721 258 GGDDVVCDPACVEELYKRAAS-KDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~-~~~ 297 (308)
|++|.+++++.++.+.+.+.. +++++++++++||.+. +.+
T Consensus 168 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 209 (236)
T 1zi8_A 168 GGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGS 209 (236)
T ss_dssp ETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred cCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCC
Confidence 999999999999999998853 4789999999999888 655
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-29 Score=193.35 Aligned_cols=241 Identities=14% Similarity=0.099 Sum_probs=157.5
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
....+.+.||.++++..+.|... .++|+||++||++ ++...+...+.+.|.+. |.|+++|+||+|.+
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~-------- 73 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKNQ-PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEV-------- 73 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSSS-SCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTS--------
T ss_pred eEEEEecCCcEEEEEEEEccCCC-CCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcc--------
Confidence 34567788999999999988753 4689999999988 55443445788888877 99999999999865
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC--CCchhhhh----
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK--PPWPLEHL---- 182 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~---- 182 (308)
+.....+|+.++++++.... +..+++++|||+||.+++.++.+ ++++++|+++|......... ........
T Consensus 74 ~~~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T 3h04_A 74 SLDCIIEDVYASFDAIQSQY-SNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSI 150 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-TTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTS
T ss_pred ccchhHHHHHHHHHHHHhhC-CCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccccc
Confidence 34456778888888877654 56699999999999999999998 78999999999765432110 00000000
Q ss_pred -HHHhhhhCCCcccccCCCCCCCccc-ccHHHHHHH---------hhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc
Q 035721 183 -LFTVAWLVPTWRVVPTRGSLPMVSF-KEEWKRKLA---------LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV 251 (308)
Q Consensus 183 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 251 (308)
......+.... ....... ......... ......... .. ......+.+++
T Consensus 151 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~~- 210 (275)
T 3h04_A 151 NETMIAQLTSPT-------PVVQDQIAQRFLIYVYARGTGKWINMINIADYTDS--KY----------NIAPDELKTLP- 210 (275)
T ss_dssp CHHHHHTTSCSS-------CCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSG--GG----------SCCHHHHTTCC-
T ss_pred hHHHHhcccCCC-------CcCCCccccchhhhhhhhhcCchHHhhcccccccc--cc----------ccccchhccCC-
Confidence 00000000000 0000000 000000000 000000000 00 00012235667
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
|+++++|++|.+++++.++.+.+.+ +++++++++++||.++ +.+ +++.+.+.++
T Consensus 211 P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~f 268 (275)
T 3h04_A 211 PVFIAHCNGDYDVPVEESEHIMNHV--PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDF 268 (275)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHTTC--SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCChHHHHHHHHhc--CCceEEEeCCCCCCcccCCchhHHHHHHHHHHH
Confidence 9999999999999999999999888 5789999999999999 878 4777777665
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=208.96 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=109.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc---------CCeEEEecCCCCcCCCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS---------GFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~ 104 (308)
.+.+..+|.+|+|....+.. +..++|||+||++++.. .|..+++.|.+. ||+|+++|+||||.|+.+.
T Consensus 70 ~~~~~i~g~~i~~~~~~~~~--~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~ 146 (388)
T 4i19_A 70 QFTTEIDGATIHFLHVRSPE--PDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLK 146 (388)
T ss_dssp EEEEEETTEEEEEEEECCSS--TTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCS
T ss_pred cEEEEECCeEEEEEEccCCC--CCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 45667799999998876654 24788999999999887 567899999875 8999999999999999876
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
...++++++++++.++++.++.+ +++++||||||.+++.+|.++|++|++++++++...
T Consensus 147 ~~~~~~~~~a~~~~~l~~~lg~~-----~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 147 SAGWELGRIAMAWSKLMASLGYE-----RYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp SCCCCHHHHHHHHHHHHHHTTCS-----SEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCC-----cEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 64568999999999999987665 999999999999999999999999999999997544
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=189.27 Aligned_cols=213 Identities=20% Similarity=0.152 Sum_probs=156.7
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC------
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP------ 108 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~------ 108 (308)
...+.+|.++.+ +.|.+ ++|+||++||++++.. .|..+++.|.++||.|+++|+||+|.|........
T Consensus 6 ~~~~~~g~~~~~--~~~~~---~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (238)
T 1ufo_A 6 ERLTLAGLSVLA--RIPEA---PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE 79 (238)
T ss_dssp EEEEETTEEEEE--EEESS---CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHH
T ss_pred cccccCCEEEEE--EecCC---CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhh
Confidence 344567766554 33443 4899999999998877 56788899998999999999999999976443211
Q ss_pred ----CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 109 ----DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 109 ----~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
+++..++|+.++++.+... ...+++++|||+||.+++.++.++|+.+.+++++++........ .
T Consensus 80 ~~~~~~~~~~~d~~~~~~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~--~-------- 147 (238)
T 1ufo_A 80 EVYRVALGFKEEARRVAEEAERR--FGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQ--G-------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCT--T--------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc--cCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhh--h--------
Confidence 2567788999999988765 33699999999999999999999999999999988754321100 0
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVV 263 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~ 263 (308)
.. ..... ...... .+....+.++ ++|+++++|++|.+
T Consensus 148 -----------------~~---~~~~~---------------------~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~ 185 (238)
T 1ufo_A 148 -----------------QV---VEDPG---------------------VLALYQ-APPATRGEAYGGVPLLHLHGSRDHI 185 (238)
T ss_dssp -----------------CC---CCCHH---------------------HHHHHH-SCGGGCGGGGTTCCEEEEEETTCTT
T ss_pred -----------------hc---cCCcc---------------------cchhhc-CChhhhhhhccCCcEEEEECCCCCc
Confidence 00 00000 000000 1233456677 89999999999999
Q ss_pred cChHHHHHHHHHhc-CC---CCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 264 CDPACVEELYKRAA-SK---DKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 264 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++.+.++.+.+.++ .. ++++++++++||.++ +.++++.+.+.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~ 234 (238)
T 1ufo_A 186 VPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHW 234 (238)
T ss_dssp TTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHH
Confidence 99999999999995 32 789999999999999 8888777766543
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=195.32 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=149.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.++|+|||+||++++.. .|..+++.|.+. |+|+++|+||+|.|...... ++++++++|+.++++.+... +++
T Consensus 18 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~l~~~~~~-----~~~ 89 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-FFFPLAKALAPA-VEVLAVQYPGRQDRRHEPPV-DSIGGLTNRLLEVLRPFGDR-----PLA 89 (267)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHHTTT-EEEEEECCTTSGGGTTSCCC-CSHHHHHHHHHHHTGGGTTS-----CEE
T ss_pred CCCceEEEeCCCCCCch-hHHHHHHHhccC-cEEEEecCCCCCCCCCCCCC-cCHHHHHHHHHHHHHhcCCC-----ceE
Confidence 45899999999998876 668899999765 99999999999999875543 58889999999998877544 999
Q ss_pred EEEechhhHHHHHHHHhcCCC----ccEEEEeCCcCCCCcCCCC--CchhhhhHHHhhhhCCCcccccCCCCCCCccccc
Q 035721 136 LYSESLGGAIALYITLRQKGA----WDGLILNGAMCGISQKFKP--PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKE 209 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (308)
++|||+||.+|+.++.++|++ +++++++++.......... ..........+...... ......+
T Consensus 90 lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 159 (267)
T 3fla_A 90 LFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGS----------DAAMLAD 159 (267)
T ss_dssp EEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHH----------HHHHHHS
T ss_pred EEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCc----------chhhccC
Confidence 999999999999999999986 9999999876432221100 00001111111100000 0000000
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh-hhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 210 EWKRKLALSSPRRPVARPRAATALELLRVSRDLQ-GRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
....... ............... .....+++|+++++|++|.+++++..+.+.+.+++ +++++++++
T Consensus 160 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g 226 (267)
T 3fla_A 160 PELLAMV------------LPAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG-PADLRVLPG 226 (267)
T ss_dssp HHHHHHH------------HHHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS-CEEEEEESS
T ss_pred HHHHHHH------------HHHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC-CceEEEecC
Confidence 0000000 000000001101110 11257899999999999999999999998888842 489999998
Q ss_pred Cccccc-CCchhhHHHhhhcC
Q 035721 289 MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~i 308 (308)
||+++ ++|+++.+.|.+++
T Consensus 227 -gH~~~~~~~~~~~~~i~~fl 246 (267)
T 3fla_A 227 -GHFFLVDQAAPMIATMTEKL 246 (267)
T ss_dssp -STTHHHHTHHHHHHHHHHHT
T ss_pred -CceeeccCHHHHHHHHHHHh
Confidence 99999 99999999988764
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=197.76 Aligned_cols=231 Identities=18% Similarity=0.225 Sum_probs=157.6
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc-
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH- 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 106 (308)
.+..+...+...+|.+|.+..+.|.+. .+.|+||++||++++.. .|..+. .+.+.||.|+++|+||+|.|......
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~~~~P~~~-~~~p~vv~~HG~g~~~~-~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~ 155 (346)
T 3fcy_A 79 FAECYDLYFTGVRGARIHAKYIKPKTE-GKHPALIRFHGYSSNSG-DWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGV 155 (346)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEESCS-SCEEEEEEECCTTCCSC-CSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCC
T ss_pred ceEEEEEEEEcCCCCEEEEEEEecCCC-CCcCEEEEECCCCCCCC-Chhhhh-HHHhCCcEEEEEcCCCCCCCCCCCccc
Confidence 344566778888999999999988753 56899999999998877 444555 45577999999999999998764321
Q ss_pred ------------------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 107 ------------------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 107 ------------------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+.+....+|+.++++.+..... +..+++++|||+||.+|+.++.++|+ |+++|+++|..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~ 234 (346)
T 3fcy_A 156 TGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFL 234 (346)
T ss_dssp SSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSS
T ss_pred CCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcc
Confidence 12234567889899988876532 45689999999999999999999998 99999998854
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh-hCCCCCCCcchHHHHHHHHHHHHHhhhhc
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL-SSPRRPVARPRAATALELLRVSRDLQGRF 246 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
.... . ..... .....+ ........ ..+.. ............ .+....+
T Consensus 235 ~~~~---------~---~~~~~------------~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~-~d~~~~~ 283 (346)
T 3fcy_A 235 SDYK---------R---VWDLD------------LAKNAY--QEITDYFRLFDPRH----ERENEVFTKLGY-IDVKNLA 283 (346)
T ss_dssp CCHH---------H---HHHTT------------CCCGGG--HHHHHHHHHHCTTC----TTHHHHHHHHGG-GCHHHHG
T ss_pred cCHH---------H---Hhhcc------------ccccch--HHHHHHHHhcCCCc----chHHHHHHHhCc-ccHHHHH
Confidence 3110 0 00000 000000 00000000 00000 000111111110 2334556
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.++++|+++++|++|.+++++.+..+++.++. ++++++++++||..+
T Consensus 284 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~ 330 (346)
T 3fcy_A 284 KRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPM 330 (346)
T ss_dssp GGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCC
T ss_pred HhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCH
Confidence 78899999999999999999999999988853 689999999999998
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=186.25 Aligned_cols=201 Identities=12% Similarity=0.051 Sum_probs=152.0
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc-
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH- 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 106 (308)
++..+...+.. +|.++.+..+.|.+...+.|+||++||+++... .+..+++.|+++||.|+++|++|+|.+......
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNADGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred cceeeeEEEec-CCcceEEEEecCCCCCCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 34445566666 888999999988765456799999999998876 668999999999999999999999876543221
Q ss_pred ---------CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 107 ---------IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 107 ---------~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
..+.....+|+.++++++.....+..+++++|||+||.+++.++.++|+ +.+++++.+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~----- 154 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKS----- 154 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCC-----
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCc-----
Confidence 1234567899999999987641124589999999999999999999987 7777776653221100
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEe
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 257 (308)
.... .+....+.++++|+++++
T Consensus 155 -----------------------~~~~-----------------------------------~~~~~~~~~~~~P~l~~~ 176 (241)
T 3f67_A 155 -----------------------LNSP-----------------------------------KHPVDIAVDLNAPVLGLY 176 (241)
T ss_dssp -----------------------SSSC-----------------------------------CCHHHHGGGCCSCEEEEE
T ss_pred -----------------------cCCc-----------------------------------cCHHHhhhhcCCCEEEEE
Confidence 0000 011233466789999999
Q ss_pred eCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 258 GGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
|++|.+++++..+.+.+.+.. ++++++++++++|.+.
T Consensus 177 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 215 (241)
T 3f67_A 177 GAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFN 215 (241)
T ss_dssp ETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTT
T ss_pred ecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCccee
Confidence 999999999999999888852 5789999999999887
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=203.94 Aligned_cols=248 Identities=16% Similarity=0.115 Sum_probs=152.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC--CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT--GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
+..++.+ ++..++|.. .+ + +|+|||+||+| ++.. .|..+++.|. +||+|+++|+||||.|+......++
T Consensus 22 ~~~~v~~-~~~~~~~~~--~~-~---~p~vv~lHG~G~~~~~~-~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~ 92 (292)
T 3l80_A 22 NKEMVNT-LLGPIYTCH--RE-G---NPCFVFLSGAGFFSTAD-NFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVG 92 (292)
T ss_dssp EEEEECC-TTSCEEEEE--EC-C---SSEEEEECCSSSCCHHH-HTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCC
T ss_pred CcceEEe-cCceEEEec--CC-C---CCEEEEEcCCCCCcHHH-HHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCccccc
Confidence 3444544 455777752 21 2 58999999654 3344 6788888887 5899999999999999954444468
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc--CCCCCchhhhhHHHhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ--KFKPPWPLEHLLFTVA 187 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~--~~~~~~~~~~~~~~~~ 187 (308)
++++++|+.++++.++.+ +++++||||||.+|+.+|.++|++|+++|+++|...... ......... ......
T Consensus 93 ~~~~~~~l~~~l~~~~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~ 166 (292)
T 3l80_A 93 LRDWVNAILMIFEHFKFQ-----SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ-LALRRQ 166 (292)
T ss_dssp HHHHHHHHHHHHHHSCCS-----EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchh-HHHHHH
Confidence 999999999999988665 999999999999999999999999999999996432110 000000000 011111
Q ss_pred hhCCCcccc-----cCCCCCCCcccccH-----HHHHHHhh-CC-CCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 188 WLVPTWRVV-----PTRGSLPMVSFKEE-----WKRKLALS-SP-RRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 188 ~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
......... .....+........ ........ .. .......... ..+..+.+.+ ++|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~l~~-~~P~li 237 (292)
T 3l80_A 167 KLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALG--------EEDFKTGISE-KIPSIV 237 (292)
T ss_dssp TCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCC--------GGGGCCCCCT-TSCEEE
T ss_pred HHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhc--------chhhhhccCC-CCCEEE
Confidence 000000000 00000000000000 00001111 11 0000000000 0122245566 899999
Q ss_pred EeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 256 CHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|++|..++++ + .+.+.+ ++.+ ++++++||+++ ++|+++++.|.+++
T Consensus 238 i~g~~D~~~~~~-~-~~~~~~--~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 238 FSESFREKEYLE-S-EYLNKH--TQTK-LILCGQHHYLHWSETNSILEKVEQLL 286 (292)
T ss_dssp EECGGGHHHHHT-S-TTCCCC--TTCE-EEECCSSSCHHHHCHHHHHHHHHHHH
T ss_pred EEccCccccchH-H-HHhccC--CCce-eeeCCCCCcchhhCHHHHHHHHHHHH
Confidence 999999999888 5 666555 5677 99999999999 99999999888763
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-27 Score=192.16 Aligned_cols=274 Identities=19% Similarity=0.144 Sum_probs=167.4
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.+..+...+.+.||.++.+..+.|.+. ..+.|+||++||++++...+...+++.|+++||.|+++|+||+|.|......
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~ 144 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRN 144 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSS
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCcc
Confidence 344566778888899999998887652 2457899999999987764434588999999999999999999999875544
Q ss_pred CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC---cCCCCCchhhhh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS---QKFKPPWPLEHL 182 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~---~~~~~~~~~~~~ 182 (308)
..+....++|+.++++++..... +..+++++|||+||.+++.++.++| +++++|+++|..... ............
T Consensus 145 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 223 (367)
T 2hdw_A 145 VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQR 223 (367)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHH
T ss_pred ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHH
Confidence 33456788999999999976532 3458999999999999999999998 699999999752100 000000000000
Q ss_pred HHHhh--------hhCC-CcccccCCCCCCCcccc-cHHHHHHHhhC----CCC--CCCcchHHHHHHHHHHHHHhhhhc
Q 035721 183 LFTVA--------WLVP-TWRVVPTRGSLPMVSFK-EEWKRKLALSS----PRR--PVARPRAATALELLRVSRDLQGRF 246 (308)
Q Consensus 183 ~~~~~--------~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
..... .... ..........+...... .......+... +.. ............+.. .+....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 301 (367)
T 2hdw_A 224 TRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN--MPILTYI 301 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT--SCSCTTG
T ss_pred HHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC--CChhHhH
Confidence 00000 0000 00000000000010000 01111111110 000 000000000000000 1223456
Q ss_pred CCCC-cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchh-hHHHhhhc
Q 035721 247 EEVE-VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE-NVELVFGE 307 (308)
Q Consensus 247 ~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~-~~~~i~~~ 307 (308)
.+++ +|+|+++|++|. +++.++.+++.. .+++++++++++||..+ ++++. +.+.+.++
T Consensus 302 ~~i~~~PvLii~G~~D~--~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~f 362 (367)
T 2hdw_A 302 KEISPRPILLIHGERAH--SRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRIPFDRIAGF 362 (367)
T ss_dssp GGGTTSCEEEEEETTCT--THHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTSCHHHHHHH
T ss_pred HhhcCCceEEEecCCCC--CHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhHHHHHHHHH
Confidence 7788 999999999998 788888888763 36799999999999977 66665 46666654
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=197.21 Aligned_cols=256 Identities=14% Similarity=0.071 Sum_probs=154.5
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHH----------------HHHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ----------------LTAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~----------------~~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
.+|..+.+..+..+ .+|+||++||++++.. .|. .+++.|.++||+|+++|+||+|.|..
T Consensus 35 ~~~~~~~~~~~~~~----~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 109 (354)
T 2rau_A 35 YDIISLHKVNLIGG----GNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPF 109 (354)
T ss_dssp TCEEEEEEEEETTC----CEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTT
T ss_pred CCceEEEeecccCC----CCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCc
Confidence 45556666554332 3689999999998875 333 78899999999999999999999986
Q ss_pred cccc------CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCCcCCCC
Q 035721 103 LVAH------IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGISQKFKP 175 (308)
Q Consensus 103 ~~~~------~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~ 175 (308)
.... .++++++++|+.++++.+.... +..+++++|||+||.+++.++.++ |++|+++|++++..........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~ 188 (354)
T 2rau_A 110 LKDRQLSFTANWGWSTWISDIKEVVSFIKRDS-GQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPK 188 (354)
T ss_dssp CCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHH-CCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--
T ss_pred ccccccccccCCcHHHHHHHHHHHHHHHHHhc-CCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccc
Confidence 4431 3577889999999999986543 456999999999999999999999 9999999999765432111100
Q ss_pred C--chhhhhHHHhhhhCC---C---c--------ccccCCCCCCCccc--ccHHHHH-HH---hhCCCCCCCcchHHHHH
Q 035721 176 P--WPLEHLLFTVAWLVP---T---W--------RVVPTRGSLPMVSF--KEEWKRK-LA---LSSPRRPVARPRAATAL 233 (308)
Q Consensus 176 ~--~~~~~~~~~~~~~~~---~---~--------~~~~~~~~~~~~~~--~~~~~~~-~~---~~~~~~~~~~~~~~~~~ 233 (308)
. ............... . . ...... ......+ ...+... .+ ..++... .........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 266 (354)
T 2rau_A 189 FYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDM-PSPDPKYKSISDFLMDSLYVTGSANPYDY-PYSKKEDMF 266 (354)
T ss_dssp CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTS-CCSSTTSSSHHHHHHHHHHHTTSCCTTST-TCCCHHHHH
T ss_pred hhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhcccccc-CccccchhhHHHHHHHhhhccccCCcccC-CCccHHHHH
Confidence 0 000001111110000 0 0 000000 0000000 0111111 11 1111111 011111121
Q ss_pred HHHH-----------HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCc---h
Q 035721 234 ELLR-----------VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEP---E 298 (308)
Q Consensus 234 ~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~ 298 (308)
.... ...+....+.++++|+|+++|++|.++|. .++ .+. +++++++++++||+++ +++ +
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~----~l~-~~~~~~~~~~~gH~~~~~~~~~~~ 340 (354)
T 2rau_A 267 PILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSK----ILP-SNSEIILLKGYGHLDVYTGENSEK 340 (354)
T ss_dssp HHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGG----GSC-TTCEEEEETTCCGGGGTSSTTHHH
T ss_pred HHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-chh----hhc-cCceEEEcCCCCCchhhcCCCcHH
Confidence 1111 01233456778999999999999997653 322 222 5789999999999987 666 8
Q ss_pred hhHHHhhhcC
Q 035721 299 ENVELVFGEM 308 (308)
Q Consensus 299 ~~~~~i~~~i 308 (308)
++.+.|.+++
T Consensus 341 ~~~~~i~~fl 350 (354)
T 2rau_A 341 DVNSVVLKWL 350 (354)
T ss_dssp HTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887653
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=198.53 Aligned_cols=234 Identities=15% Similarity=0.044 Sum_probs=158.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
....+...+.. +|.+|.+..+.|.+. .+.|+||++||++++...++ .....|.++||.|+++|+||+|.|......
T Consensus 124 ~~~~~~v~~~~-dg~~i~~~l~~p~~~-~~~P~vl~~hG~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~- 199 (386)
T 2jbw_A 124 SPPAERHELVV-DGIPMPVYVRIPEGP-GPHPAVIMLGGLESTKEESF-QMENLVLDRGMATATFDGPGQGEMFEYKRI- 199 (386)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSS-CCEEEEEEECCSSCCTTTTH-HHHHHHHHTTCEEEEECCTTSGGGTTTCCS-
T ss_pred CCCeEEEEEEe-CCEEEEEEEEcCCCC-CCCCEEEEeCCCCccHHHHH-HHHHHHHhCCCEEEEECCCCCCCCCCCCCC-
Confidence 34556666665 899999999988764 56899999999998876454 448888889999999999999998332222
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..++.+++.++++.+..... +..+++++|||+||.+++.++.+ +++++++|++ +......... ...
T Consensus 200 --~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~---~~~------ 266 (386)
T 2jbw_A 200 --AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD---LET------ 266 (386)
T ss_dssp --CSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG---GSC------
T ss_pred --CccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH---hcc------
Confidence 23334445555555554311 44599999999999999999999 8899999999 7654332110 000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHH-HHHHHHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATAL-ELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
..... ...... ......... ..... .+....+.++++|+|+++|++|. ++
T Consensus 267 ------------------~~~~~----~~~~~~-----g~~~~~~~~~~~~~~-~~~~~~~~~i~~P~Lii~G~~D~-v~ 317 (386)
T 2jbw_A 267 ------------------PLTKE----SWKYVS-----KVDTLEEARLHVHAA-LETRDVLSQIACPTYILHGVHDE-VP 317 (386)
T ss_dssp ------------------HHHHH----HHHHHT-----TCSSHHHHHHHHHHH-TCCTTTGGGCCSCEEEEEETTSS-SC
T ss_pred ------------------HHHHH----HHHHHh-----CCCCHHHHHHHHHHh-CChhhhhcccCCCEEEEECCCCC-CC
Confidence 00000 000000 000001111 11111 12234567889999999999999 99
Q ss_pred hHHHHHHHHHh-cCCCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 266 PACVEELYKRA-ASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
++.++.+++.+ +. ++++++++++||...++++++.+.+.+++
T Consensus 318 ~~~~~~l~~~l~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 360 (386)
T 2jbw_A 318 LSFVDTVLELVPAE-HLNLVVEKDGDHCCHNLGIRPRLEMADWL 360 (386)
T ss_dssp THHHHHHHHHSCGG-GEEEEEETTCCGGGGGGTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CcEEEEeCCCCcCCccchHHHHHHHHHHH
Confidence 99999999998 53 68999999999976677888888887653
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-28 Score=174.41 Aligned_cols=170 Identities=20% Similarity=0.170 Sum_probs=132.6
Q ss_pred CCcceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 56 KTLGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.++|+||++||++++... .+..+.+.|.++||.|+++|+||+|.|.... ...+..+++..+++.+.... +..++
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~ 76 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLG----QLGDVRGRLQRLLEIARAAT-EKGPV 76 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC----TTCCHHHHHHHHHHHHHHHH-TTSCE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHhcC-CCCCE
Confidence 357899999999987652 2348899999999999999999999987432 22333444444444444332 34599
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
+++|||+||.+++.++.++| ++++|+++|....... .
T Consensus 77 ~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------------------~----------- 113 (176)
T 2qjw_A 77 VLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------------------P----------- 113 (176)
T ss_dssp EEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------------------C-----------
T ss_pred EEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------------------C-----------
Confidence 99999999999999999998 9999999986543200 0
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+..+++|+++++|++|.+++++.++.+.+.+ +++++++ ++||.+.
T Consensus 114 ------------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~-~~~H~~~ 159 (176)
T 2qjw_A 114 ------------------------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR---SARLLLV-DDGHRLG 159 (176)
T ss_dssp ------------------------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEE-SSCTTCT
T ss_pred ------------------------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC---CceEEEe-CCCcccc
Confidence 04567899999999999999999999999887 5789999 8999987
Q ss_pred CCchhhHHHhhhc
Q 035721 295 GEPEENVELVFGE 307 (308)
Q Consensus 295 ~~~~~~~~~i~~~ 307 (308)
++++++.+.+.++
T Consensus 160 ~~~~~~~~~i~~f 172 (176)
T 2qjw_A 160 AHVQAASRAFAEL 172 (176)
T ss_dssp TCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 8888888887765
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=187.91 Aligned_cols=207 Identities=12% Similarity=0.023 Sum_probs=153.8
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
..+...+|..+.+..|.|.+ .++|+||++||.+ ++.. .|..+++.|.++||.|+++|+||++. .++
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~--~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~~~~--------~~~ 109 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEG--TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPE--------VRI 109 (262)
T ss_dssp EEEESSSSTTCEEEEECCSS--SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTT--------SCH
T ss_pred cccccCCCCCceEEEEccCC--CCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeCCCCCCC--------CCh
Confidence 34544566677777787765 4589999999954 4444 55788899999999999999999864 267
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
.+.++|+.++++++.... ..+++++|||+||.+++.++.++ +++++++|+++|..........
T Consensus 110 ~~~~~d~~~~~~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~--------- 178 (262)
T 2pbl_A 110 SEITQQISQAVTAAAKEI--DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT--------- 178 (262)
T ss_dssp HHHHHHHHHHHHHHHHHS--CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS---------
T ss_pred HHHHHHHHHHHHHHHHhc--cCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh---------
Confidence 788999999999998862 25999999999999999999988 8899999999986543211000
Q ss_pred HhhhhCCCcccccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
...... ..... ... ......+.++++|+++++|++|.+
T Consensus 179 -----------------~~~~~~~~~~~~-----------------------~~~-~~~~~~~~~~~~P~lii~G~~D~~ 217 (262)
T 2pbl_A 179 -----------------SMNEKFKMDADA-----------------------AIA-ESPVEMQNRYDAKVTVWVGGAERP 217 (262)
T ss_dssp -----------------TTHHHHCCCHHH-----------------------HHH-TCGGGCCCCCSCEEEEEEETTSCH
T ss_pred -----------------hhhhhhCCCHHH-----------------------HHh-cCcccccCCCCCCEEEEEeCCCCc
Confidence 000000 00000 000 111234567899999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
++++.++.+.+.+ + +++++++++||+.+ ++++.....+.+
T Consensus 218 ~~~~~~~~~~~~~--~-~~~~~~~~~~H~~~~~~~~~~~~~l~~ 258 (262)
T 2pbl_A 218 AFLDQAIWLVEAW--D-ADHVIAFEKHHFNVIEPLADPESDLVA 258 (262)
T ss_dssp HHHHHHHHHHHHH--T-CEEEEETTCCTTTTTGGGGCTTCHHHH
T ss_pred ccHHHHHHHHHHh--C-CeEEEeCCCCcchHHhhcCCCCcHHHH
Confidence 9999999999999 4 89999999999999 877776666554
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-28 Score=186.13 Aligned_cols=182 Identities=18% Similarity=0.166 Sum_probs=143.2
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.+|..++|....+ ..++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.+.. ....|+.
T Consensus 38 ~~~~~l~~p~~~~---~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~---------~~~~d~~ 104 (262)
T 1jfr_A 38 FGGGTIYYPTSTA---DGTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQPD---------SRGRQLL 104 (262)
T ss_dssp SCCEEEEEESCCT---TCCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCHH---------HHHHHHH
T ss_pred CCceeEEecCCCC---CCCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCCc---------hhHHHHH
Confidence 3455666643321 245799999999998887 56788999999999999999999996532 2345666
Q ss_pred HHHHHHHH----hcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 119 SFFDSFRA----RHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 119 ~~l~~~~~----~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
.+++++.. ... +..+++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 67766655 111 44589999999999999999999997 999999987421
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEEL 272 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~ 272 (308)
...+.++++|+++++|++|.+++.+. ++.+
T Consensus 159 -------------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 189 (262)
T 1jfr_A 159 -------------------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPF 189 (262)
T ss_dssp -------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHH
T ss_pred -------------------------------------------------cccccccCCCEEEEecCccccCCchhhHHHH
Confidence 13345678999999999999999998 9999
Q ss_pred HHHhcC-CCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 273 YKRAAS-KDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 273 ~~~~~~-~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+.++. .++++++++++||..+ ++++++.+.+.++|
T Consensus 190 ~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 227 (262)
T 1jfr_A 190 YESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWL 227 (262)
T ss_dssp HHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHH
T ss_pred HHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHH
Confidence 999853 3569999999999999 88888888887653
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=190.40 Aligned_cols=227 Identities=12% Similarity=0.017 Sum_probs=135.3
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEec----CCCCcCCCCccccCCCcchHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAID----HQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d----~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
..++|..+++.. ..+|+|||+||++++.. .+|..+++.| ..||+|+++| +||||.|+. ...++
T Consensus 24 ~~~~y~~~g~~~--~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~--------~~~~~ 92 (335)
T 2q0x_A 24 PYCKIPVFMMNM--DARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH--------AHDAE 92 (335)
T ss_dssp TTEEEEEEEECT--TSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCH--------HHHHH
T ss_pred CceeEEEeccCC--CCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccc--------cCcHH
Confidence 678888887311 23688999999987543 2467888888 6689999995 599999853 34567
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH--hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCC--
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL--RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVP-- 191 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 191 (308)
|+.++++.+.... +..+++|+||||||.+|+.+|. .+|++|+++|+++|..........................
T Consensus 93 d~~~~~~~l~~~l-~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (335)
T 2q0x_A 93 DVDDLIGILLRDH-CMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEG 171 (335)
T ss_dssp HHHHHHHHHHHHS-CCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc-CCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhcc
Confidence 8888887775532 5569999999999999999999 5799999999999864322100000000111111111000
Q ss_pred -CcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 192 -TWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
........ ........ . ....... ............. ...+..+.+.++++|+|+|+|++|.++|++.
T Consensus 172 ~~~~~~~~~-~~~~~~~~-~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~ 242 (335)
T 2q0x_A 172 RGEDSLAML-KHYDIPIT-P---ARLAGGG----FPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDE 242 (335)
T ss_dssp CTTCGGGGT-TTCSSCCC-H---HHHHTCS----CSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHH
T ss_pred Cccccccch-hhccCccC-H---HHHhhcc----CCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhh
Confidence 00000000 00000000 0 0000000 0000000011000 1134556788999999999999999999763
Q ss_pred -----HHHHHHHhcCCCCc--------E-----EEecCCcc
Q 035721 269 -----VEELYKRAASKDKT--------L-----SIYPGMWH 291 (308)
Q Consensus 269 -----~~~~~~~~~~~~~~--------~-----~~~~~~gH 291 (308)
.+.+.+.+ ++.+ + ++++++||
T Consensus 243 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~i~~agH 281 (335)
T 2q0x_A 243 EVGTVLEGVRDHT--GCNRVTVSYFNDTCDELRRVLKAAES 281 (335)
T ss_dssp HHHHHHHHHHHHS--SSSCEEEEECCCEECTTSCEEECCHH
T ss_pred hHHHHHHHHHHhc--CccccccccccchhhhhhcccCCCCC
Confidence 45666666 4566 6 88999999
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=196.41 Aligned_cols=254 Identities=14% Similarity=0.022 Sum_probs=158.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
.+.+...+.. +|.++....+.+.. ++.|+||++||++++...++..+...+.++||+|+++|+||+|.|......
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-- 207 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISED--KAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLH-- 207 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCSS--SCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCC--
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCCC--CCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCC--
Confidence 3445555544 67788877664432 345999999999888774434444466678999999999999999643322
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
...++.+|+.++++++... . .+++++|||+||.+++.++.++| +++++|+++|....... ....+..
T Consensus 208 ~~~~~~~d~~~~~~~l~~~--~-~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~---------~~~~~~~ 274 (405)
T 3fnb_A 208 FEVDARAAISAILDWYQAP--T-EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEV---------FRISFST 274 (405)
T ss_dssp CCSCTHHHHHHHHHHCCCS--S-SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHH---------HHHHCC-
T ss_pred CCccHHHHHHHHHHHHHhc--C-CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHH---------HHHhhhh
Confidence 3346688999999988774 2 49999999999999999999999 89999999987643210 0000000
Q ss_pred hC--CCcccccCCCCCCCccccc-HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh--hhcCCCCcceEEEeeCCCcc
Q 035721 189 LV--PTWRVVPTRGSLPMVSFKE-EWKRKLALSSPRRPVARPRAATALELLRVSRDLQ--GRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 189 ~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~P~l~i~g~~D~~ 263 (308)
.. +........ ......... .+....... ... ...... ......... ..+.++++|+|+++|++|.+
T Consensus 275 ~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~---~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 346 (405)
T 3fnb_A 275 ALKAPKTILKWGS-KLVTSVNKVAEVNLNKYAW---QFG-QVDFIT---SVNEVLEQAQIVDYNKIDVPSLFLVGAGEDS 346 (405)
T ss_dssp ------------------CCCHHHHHHHHHHHH---HHT-SSSHHH---HHHHHHHHCCCCCGGGCCSCEEEEEETTSCH
T ss_pred hhhCcHHHHHHHH-HHhhccchhHHHHHHHhhh---hcC-CCCHHH---HHHHHHHhhcccCHhhCCCCEEEEecCCCcC
Confidence 00 000000000 000000000 000000000 000 000111 111111111 12678899999999999999
Q ss_pred cChHHHHHHHHHhc--CCCCcEEEe---cCCccccc-CCchhhHHHhhhcC
Q 035721 264 CDPACVEELYKRAA--SKDKTLSIY---PGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 264 ~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++.++.+++.++ +++++++++ +++||.+. ++++.+.+.|.++|
T Consensus 347 v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL 397 (405)
T 3fnb_A 347 ELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWL 397 (405)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHH
Confidence 99999999999985 346789999 66777778 88999888887653
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=184.46 Aligned_cols=223 Identities=12% Similarity=-0.000 Sum_probs=154.3
Q ss_pred cccccceeEEcCCCcEEEEEEecCCC-----CCCCcceEEEEccCC--CccchHHHHHHHHHHHcCCeEEEecCCCCcCC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLP-----PAKTLGVLCVVHGFT--GESSWIVQLTAVLFAKSGFATCAIDHQGHGFS 100 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~-----~~~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 100 (308)
..+.....+.+.+|..+.+..| |.. +..+.|+||++||.+ +.....|..+++.|+++||.|+++|+||+|.+
T Consensus 16 ~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~ 94 (283)
T 3bjr_A 16 YFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQ 94 (283)
T ss_dssp -CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTC
T ss_pred CCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCcc
Confidence 3445667788888888888888 654 335689999999954 23333567899999999999999999999887
Q ss_pred CCccccCCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCCC-------------ccEEEEe
Q 035721 101 DGLVAHIPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKGA-------------WDGLILN 163 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~-------------v~~~vl~ 163 (308)
. ........|+.++++++.... + +..+++++|||+||.+|+.++.++|++ ++++|++
T Consensus 95 ~------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (283)
T 3bjr_A 95 Q------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLG 168 (283)
T ss_dssp S------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEE
T ss_pred c------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEc
Confidence 3 133455667777777665421 1 335899999999999999999999976 9999999
Q ss_pred CCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh
Q 035721 164 GAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQ 243 (308)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (308)
+|............ .... .+... .. ..+..
T Consensus 169 ~p~~~~~~~~~~~~------------------~~~~-~~~~~-----------------~~--------------~~~~~ 198 (283)
T 3bjr_A 169 YPVISPLLGFPKDD------------------ATLA-TWTPT-----------------PN--------------ELAAD 198 (283)
T ss_dssp SCCCCTTSBC---------------------------CCCCC-----------------GG--------------GGCGG
T ss_pred CCcccccccccccc------------------chHH-HHHHH-----------------hH--------------hcCHH
Confidence 88654321110000 0000 00000 00 01222
Q ss_pred hhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCc-------------hhhHHHhhhc
Q 035721 244 GRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEP-------------EENVELVFGE 307 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~-------------~~~~~~i~~~ 307 (308)
..+.++.+|+++++|++|.++|++.++.+++.++. .++++++++++||.+. +.+ +++.+.+.++
T Consensus 199 ~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 278 (283)
T 3bjr_A 199 QHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEW 278 (283)
T ss_dssp GSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHH
T ss_pred HhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHH
Confidence 34567889999999999999999999999988853 3579999999999777 543 5566666554
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=179.79 Aligned_cols=207 Identities=12% Similarity=0.057 Sum_probs=139.2
Q ss_pred cceeEEcCCCcEEEEEEecCCC-----CCCCcceEEEEcc---CCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLP-----PAKTLGVLCVVHG---FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~-----~~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
+...+ ..+|.++.+..+.|.. ...+.|+||++|| ..++.. .|..+++.|+++||.|+++|+||+|.+..
T Consensus 5 ~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~- 81 (277)
T 3bxp_A 5 EQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGDQS- 81 (277)
T ss_dssp EEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTTCC-
T ss_pred EEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCCCc-
Confidence 33444 5677788888888862 3356899999999 444444 55788999999999999999999994432
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--------------CCCccEEEEeCC
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--------------KGAWDGLILNGA 165 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--------------p~~v~~~vl~~~ 165 (308)
......+|+.++++++.... + +..+++++|||+||.+|+.++.++ +.+++++|+++|
T Consensus 82 -----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 156 (277)
T 3bxp_A 82 -----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYP 156 (277)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESC
T ss_pred -----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCC
Confidence 33455677777777665431 1 345899999999999999999985 678999999998
Q ss_pred cCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhh
Q 035721 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245 (308)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
........... ............ ..+....
T Consensus 157 ~~~~~~~~~~~---------------------------------~~~~~~~~~~~~-----------------~~~~~~~ 186 (277)
T 3bxp_A 157 VIDLTAGFPTT---------------------------------SAARNQITTDAR-----------------LWAAQRL 186 (277)
T ss_dssp CCBTTSSSSSS---------------------------------HHHHHHHCSCGG-----------------GSBGGGG
T ss_pred cccCCCCCCCc---------------------------------cccchhccchhh-----------------hcCHhhc
Confidence 75432211000 000000000000 0112234
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~ 296 (308)
+.++.+|+++++|++|.++|++.++.+++.+.. .++++++++++||.+. ..
T Consensus 187 ~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 187 VTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp CCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC--------
T ss_pred cccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 556788999999999999999999999888742 3579999999999665 54
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-28 Score=188.29 Aligned_cols=220 Identities=13% Similarity=0.029 Sum_probs=142.5
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|...... ++++++++++.++++.+.. ..+++|+
T Consensus 51 ~~~lvllHG~~~~~~-~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a~~~~~~l~~~~~----~~~~~lv 123 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVS-AFRGWQERLGD-EVAVVPVQLPGRGLRLRERPY-DTMEPLAEAVADALEEHRL----THDYALF 123 (280)
T ss_dssp SEEEEEECCTTCCGG-GGTTHHHHHCT-TEEEEECCCTTSGGGTTSCCC-CSHHHHHHHHHHHHHHTTC----SSSEEEE
T ss_pred CceEEEECCCCCChH-HHHHHHHhcCC-CceEEEEeCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhCC----CCCEEEE
Confidence 388999999998887 56889999977 899999999999999766443 5889999999999988732 2399999
Q ss_pred EechhhHHHHHHHHhcCCCcc----EEEEeCCcCCCCcCCCCC--chhhhhHHHhhhhCCCcccccCCCCCCCcccccHH
Q 035721 138 SESLGGAIALYITLRQKGAWD----GLILNGAMCGISQKFKPP--WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~----~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (308)
||||||.+|+.+|.++|+++. .++++++........... .........+....... .....+.
T Consensus 124 G~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~- 192 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLD----------DADTLGA- 192 (280)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC------------------
T ss_pred EeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCC----------hhhhcCH-
Confidence 999999999999999998777 788777643221111100 00111111111111000 0000000
Q ss_pred HHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 212 KRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
. . .................. ...+..+++|+++++|++|.+++++..+.+.+.++ ...++++++ +|
T Consensus 193 ---------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-gg 259 (280)
T 3qmv_A 193 ---------A-Y-FDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT-GSFLRRHLP-GN 259 (280)
T ss_dssp -------------CCTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS-SCEEEEEEE-EE
T ss_pred ---------H-H-HHHHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcC-CceEEEEec-CC
Confidence 0 0 000011111111111111 12246789999999999999999999888887774 235777777 69
Q ss_pred cccc---CCchhhHHHhhhcC
Q 035721 291 HQLI---GEPEENVELVFGEM 308 (308)
Q Consensus 291 H~~~---~~~~~~~~~i~~~i 308 (308)
|+.+ ++++++++.|.++|
T Consensus 260 H~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 260 HFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp TTGGGSSHHHHHHHHHHHTTC
T ss_pred CeEEcCchhHHHHHHHHHhhC
Confidence 9987 45778888887765
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=180.46 Aligned_cols=209 Identities=13% Similarity=0.074 Sum_probs=150.3
Q ss_pred eeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 34 EYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
..+...+|.++.++...+... ..+.|+||++||.+ ++.. .+..+++.|+++||.|+++|+||+|.|... .
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~----~ 91 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLNYTVMNKGTNY----N 91 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEECCCTTSCCCS----C
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEecCccCCCcCCC----C
Confidence 455667888888876555431 14579999999944 3333 557889999999999999999999987642 2
Q ss_pred CcchHHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 109 DLNPVVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
.+....+|+.++++++..... +..+++++|||+||.+++.++.+ .+.+++++|+++|..............
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~---- 167 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDLSH---- 167 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSSSS----
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcchhh----
Confidence 455677888888888877521 45699999999999999999998 788999999999876543221100000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
. .+. .+ .. .. .+....+.++.+|+++++|++|.+
T Consensus 168 ---------------~-~~~----~~----------~~---~~-------------~~~~~~~~~~~~P~lii~G~~D~~ 201 (276)
T 3hxk_A 168 ---------------F-NFE----IE----------NI---SE-------------YNISEKVTSSTPPTFIWHTADDEG 201 (276)
T ss_dssp ---------------S-CCC----CS----------CC---GG-------------GBTTTTCCTTSCCEEEEEETTCSS
T ss_pred ---------------h-hcC----ch----------hh---hh-------------CChhhccccCCCCEEEEecCCCce
Confidence 0 000 00 00 00 122344567889999999999999
Q ss_pred cChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCc
Q 035721 264 CDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~ 297 (308)
+|++.++.+++.+.. .++++++++++||.+. ..+
T Consensus 202 vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 202 VPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp SCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCST
T ss_pred eChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCc
Confidence 999999999998853 3469999999999877 555
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=177.32 Aligned_cols=190 Identities=22% Similarity=0.249 Sum_probs=130.4
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC----
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP---- 108 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~---- 108 (308)
.+....||.+|.+.+|.|.+. .+.|+||++||++++.. ..+..+++.|+++||.|+++|+||||.|........
T Consensus 33 ~~~~~~dG~~i~g~l~~P~~~-~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~ 111 (259)
T 4ao6_A 33 GFSLEVDGRTVPGVYWSPAEG-SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDV 111 (259)
T ss_dssp EEEEEETTEEEEEEEEEESSS-CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCG
T ss_pred EEEEeeCCeEEEEEEEeCCCC-CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchh
Confidence 344567999999999999765 56799999999987743 245688999999999999999999998875332110
Q ss_pred --------------CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC
Q 035721 109 --------------DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK 174 (308)
Q Consensus 109 --------------~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~ 174 (308)
.....+.|..+.++.+.... +..++.++|+|+||.+++.++...| ++++.|+..+.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~-d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~~---- 185 (259)
T 4ao6_A 112 VGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEE-GPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEGV---- 185 (259)
T ss_dssp GGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTST----
T ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhcc-CCceEEEEeechhHHHHHHHHhcCC-ceEEEEEeccccccc----
Confidence 01122346666666665544 6779999999999999999999988 477776544321100
Q ss_pred CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceE
Q 035721 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPML 254 (308)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 254 (308)
. ..+..+.+.++++|+|
T Consensus 186 ----------------------------~-----------------------------------~~~~~~~a~~i~~P~L 202 (259)
T 4ao6_A 186 ----------------------------N-----------------------------------GEDLVRLAPQVTCPVR 202 (259)
T ss_dssp ----------------------------T-----------------------------------HHHHHHHGGGCCSCEE
T ss_pred ----------------------------c-----------------------------------ccchhhhhccCCCCEE
Confidence 0 0122344667899999
Q ss_pred EEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 255 ICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 255 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+++|++|.++|++.+.++++.+.+++.+++++++ +|...
T Consensus 203 i~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~ 241 (259)
T 4ao6_A 203 YLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV 241 (259)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc
Confidence 9999999999999999999999777788888885 66543
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=197.47 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=100.8
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH------cCCeEEEecCCCCcCCCCcc-cc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK------SGFATCAIDHQGHGFSDGLV-AH 106 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~------~g~~v~~~d~~G~G~s~~~~-~~ 106 (308)
.+....+|.+|+|...++.. +..++|||+||++++.. .|..+++.|.+ .||+|+++|+||||.|+.+. ..
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~--~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~ 163 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSER--EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 163 (408)
T ss_dssp EEEEEETTEEEEEEEECCSC--TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSS
T ss_pred CEEEEECCEEEEEEEecCCC--CCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCC
Confidence 34456699999999887654 24678999999998877 56788999987 48999999999999999865 34
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
.++++++++++.++++.++.. .+++++||||||.+++.+|.++|+ +.++++..+
T Consensus 164 ~~~~~~~a~~~~~l~~~lg~~----~~~~lvG~S~Gg~ia~~~A~~~p~-~~~~~l~~~ 217 (408)
T 3g02_A 164 DFGLMDNARVVDQLMKDLGFG----SGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNFC 217 (408)
T ss_dssp CCCHHHHHHHHHHHHHHTTCT----TCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCC
T ss_pred CCCHHHHHHHHHHHHHHhCCC----CCEEEeCCCchHHHHHHHHHhCCC-ceEEEEeCC
Confidence 468999999999999887542 189999999999999999999976 555555443
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=190.12 Aligned_cols=186 Identities=13% Similarity=0.147 Sum_probs=139.0
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHH-------HHHHHHHHcCCeEEEecCCCCcCCCCccccC-------
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ-------LTAVLFAKSGFATCAIDHQGHGFSDGLVAHI------- 107 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~------- 107 (308)
..+++..+.|.+. ++++|||+||++.+.. .|. .+++.|.++||.|+++|+||||.|.......
T Consensus 48 ~~~~~~~~~p~~~--~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~ 124 (328)
T 1qlw_A 48 DQMYVRYQIPQRA--KRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 124 (328)
T ss_dssp SCEEEEEEEETTC--CSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTS
T ss_pred eeEEEEEEccCCC--CCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccc
Confidence 3456666666542 4688999999998776 455 4889999999999999999999998643210
Q ss_pred ----------------------CC----------------cch------------------HHHHHHHHHHHHHHhcCCC
Q 035721 108 ----------------------PD----------------LNP------------------VVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 108 ----------------------~~----------------~~~------------------~~~d~~~~l~~~~~~~~~~ 131 (308)
+. +++ .++++.++++.+ .
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~---- 198 (328)
T 1qlw_A 125 APASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL--D---- 198 (328)
T ss_dssp SCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH--T----
T ss_pred cCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh--C----
Confidence 00 111 455555555543 2
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHH
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (308)
+++++|||+||.+++.++.++|++|+++|+++|... .
T Consensus 199 -~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------------~------------ 235 (328)
T 1qlw_A 199 -GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------------P------------ 235 (328)
T ss_dssp -SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------------C------------
T ss_pred -CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------------C------------
Confidence 899999999999999999999999999999997430 0
Q ss_pred HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh-----HHHHHHHHHhcC--CCCcEE
Q 035721 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP-----ACVEELYKRAAS--KDKTLS 284 (308)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~~--~~~~~~ 284 (308)
+.......+++|+|+++|++|.++++ +.++.+.+.++. .+++++
T Consensus 236 -----------------------------~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~ 286 (328)
T 1qlw_A 236 -----------------------------KPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLM 286 (328)
T ss_dssp -----------------------------CGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred -----------------------------CHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEE
Confidence 00011223568999999999999996 888888888842 268999
Q ss_pred EecCCc-----cccc-CC-chhhHHHhhhcC
Q 035721 285 IYPGMW-----HQLI-GE-PEENVELVFGEM 308 (308)
Q Consensus 285 ~~~~~g-----H~~~-~~-~~~~~~~i~~~i 308 (308)
+++++| |+++ +. ++++.+.+.+++
T Consensus 287 ~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl 317 (328)
T 1qlw_A 287 SLPALGVHGNSHMMMQDRNNLQVADLILDWI 317 (328)
T ss_dssp EGGGGTCCCCCTTGGGSTTHHHHHHHHHHHH
T ss_pred EcCCCCcCCCcccchhccCHHHHHHHHHHHH
Confidence 999666 9999 77 888888887653
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=184.31 Aligned_cols=226 Identities=15% Similarity=0.141 Sum_probs=152.3
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCc-cchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGE-SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH-- 106 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-- 106 (308)
..+...+.+.+|.++.+..+.|.+. .+.|+||++||++++ .. .|.... .|+++||.|+++|+||+|.|......
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~~-~~~p~vv~~HG~~~~~~~-~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~~ 131 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDKE-GPHPAIVKYHGYNASYDG-EIHEMV-NWALHGYATFGMLVRGQQRSEDTSISPH 131 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESSC-SCEEEEEEECCTTCCSGG-GHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCSS
T ss_pred EEEEEEEEccCCCEEEEEEEeeCCC-CCccEEEEEcCCCCCCCC-Cccccc-chhhCCcEEEEecCCCCCCCCCcccccC
Confidence 4456677777898999999988653 568999999999988 65 555544 67788999999999999998765210
Q ss_pred ---------------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 107 ---------------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 107 ---------------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
.+.+...++|+.++++++..... +..+++++|||+||.+++.++.++|+ +.++|+++|.....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~ 210 (318)
T 1l7a_A 132 GHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF 210 (318)
T ss_dssp CCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH
T ss_pred CccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCH
Confidence 01124668899999999987532 34689999999999999999999885 88988887753210
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCC
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEE 248 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 248 (308)
..... .... . .+ .. ......... . ........... .+....+.+
T Consensus 211 ---------~~~~~----~~~~------~-~~-----~~--~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T 1l7a_A 211 ---------ERAID----VALE------Q-PY-----LE--INSFFRRNG-----S--PETEVQAMKTLSYFDIMNLADR 256 (318)
T ss_dssp ---------HHHHH----HCCS------T-TT-----TH--HHHHHHHSC-----C--HHHHHHHHHHHHTTCHHHHGGG
T ss_pred ---------HHHHh----cCCc------C-cc-----HH--HHHHHhccC-----C--cccHHHHHHhhccccHHHHHhh
Confidence 00000 0000 0 00 00 000000000 0 00000111110 112344667
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+++|+++++|++|.+++++.++.+++.+.. ++++++++++||...
T Consensus 257 ~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~H~~~ 301 (318)
T 1l7a_A 257 VKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYI 301 (318)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCC
T ss_pred CCCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEccCCCCCCc
Confidence 889999999999999999999999999853 489999999999954
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=178.10 Aligned_cols=180 Identities=17% Similarity=0.178 Sum_probs=137.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEe-------------------cCCCCcCCCCccccCCCcchHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI-------------------DHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~-------------------d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
.++|+||++||++++.. .|..+.+.|.+.||.|+++ |++|+ .+... ....++++.+++
T Consensus 21 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~-~~~~~~~~~~~~ 97 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQ-EDESGIKQAAEN 97 (232)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCC-BCHHHHHHHHHH
T ss_pred CCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccccc-cccHHHHHHHHH
Confidence 45899999999998876 6678888888789999998 66666 22222 222367788899
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc
Q 035721 117 AISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV 195 (308)
Q Consensus 117 ~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
+.++++.+.. .+ +..+++++|||+||.+++.++.++|++++++|++++........
T Consensus 98 ~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~---------------------- 154 (232)
T 1fj2_A 98 IKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF---------------------- 154 (232)
T ss_dssp HHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS----------------------
T ss_pred HHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc----------------------
Confidence 9999998854 21 33699999999999999999999999999999999865432100
Q ss_pred ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHH
Q 035721 196 VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 275 (308)
. . ....+..+++|+++++|++|.+++.+.++.+.+.
T Consensus 155 ---~-~----------------------------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~ 190 (232)
T 1fj2_A 155 ---P-Q----------------------------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEK 190 (232)
T ss_dssp ---C-S----------------------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ---c-c----------------------------------------cccccccCCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 0 0 0123456789999999999999999999888887
Q ss_pred hcC----CCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 276 AAS----KDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 276 ~~~----~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
+.. +++++++++++||.+. +..+.+.+.+.
T Consensus 191 l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~ 225 (232)
T 1fj2_A 191 LKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFID 225 (232)
T ss_dssp HHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred HHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHH
Confidence 742 3589999999999997 66655555443
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=173.03 Aligned_cols=164 Identities=14% Similarity=0.099 Sum_probs=128.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCC---eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGF---ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
+|+|||+||++++.. .|..+++.|.++|| +|+++|+||+|.|.. .+.+++++++.++++.+... ++
T Consensus 3 ~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-----~~~~~~~~~~~~~~~~~~~~-----~~ 71 (181)
T 1isp_A 3 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-----NNGPVLSRFVQKVLDETGAK-----KV 71 (181)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-----HHHHHHHHHHHHHHHHHCCS-----CE
T ss_pred CCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh-----hhHHHHHHHHHHHHHHcCCC-----eE
Confidence 678999999998887 66889999999998 799999999998753 25667778888887766544 99
Q ss_pred EEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHH
Q 035721 135 FLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK 212 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (308)
+++||||||.+++.++.++ |++++++|++++....... . .+..
T Consensus 72 ~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------------------------~-~~~~-------- 116 (181)
T 1isp_A 72 DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------K-ALPG-------- 116 (181)
T ss_dssp EEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------B-CCCC--------
T ss_pred EEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc--------------------------c-cCCC--------
Confidence 9999999999999999988 8899999999986432110 0 0000
Q ss_pred HHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccc
Q 035721 213 RKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQ 292 (308)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 292 (308)
.....++|+++++|++|.++|++..+ + +++++++++++||+
T Consensus 117 --------------------------------~~~~~~~p~l~i~G~~D~~v~~~~~~-----~--~~~~~~~~~~~gH~ 157 (181)
T 1isp_A 117 --------------------------------TDPNQKILYTSIYSSADMIVMNYLSR-----L--DGARNVQIHGVGHI 157 (181)
T ss_dssp --------------------------------SCTTCCCEEEEEEETTCSSSCHHHHC-----C--BTSEEEEESSCCTG
T ss_pred --------------------------------CCCccCCcEEEEecCCCccccccccc-----C--CCCcceeeccCchH
Confidence 00123579999999999999987432 3 67899999999999
Q ss_pred cc-CCchhhHHHhhhc
Q 035721 293 LI-GEPEENVELVFGE 307 (308)
Q Consensus 293 ~~-~~~~~~~~~i~~~ 307 (308)
.+ ++| ++.+.+.++
T Consensus 158 ~~~~~~-~~~~~i~~f 172 (181)
T 1isp_A 158 GLLYSS-QVNSLIKEG 172 (181)
T ss_dssp GGGGCH-HHHHHHHHH
T ss_pred hhccCH-HHHHHHHHH
Confidence 99 776 677777665
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=183.09 Aligned_cols=175 Identities=17% Similarity=0.173 Sum_probs=140.6
Q ss_pred EecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 48 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
++.|... .+.|+||++||++++.. .|..+++.|.++||.|+++|+||+|.|.. ...+|+..+++++...
T Consensus 87 ~~~p~~~-~~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~~---------~~~~d~~~~~~~l~~~ 155 (306)
T 3vis_A 87 IYYPREN-NTYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQPD---------SRARQLNAALDYMLTD 155 (306)
T ss_dssp EEEESSC-SCEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCHH---------HHHHHHHHHHHHHHHT
T ss_pred EEeeCCC-CCCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCcc---------hHHHHHHHHHHHHHhh
Confidence 3445444 35889999999998877 66899999999999999999999998743 2235666666666553
Q ss_pred ------cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 128 ------HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 128 ------~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
.. +..+++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 156 ~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------- 202 (306)
T 3vis_A 156 ASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------- 202 (306)
T ss_dssp SCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------
T ss_pred cchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------
Confidence 22 45699999999999999999999997 999999988422
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH-HHHHHHHHhcCC
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA-CVEELYKRAASK 279 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 279 (308)
...+.++++|+++++|++|.+++++ ..+.+++.++..
T Consensus 203 ------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~ 240 (306)
T 3vis_A 203 ------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSP 240 (306)
T ss_dssp ------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTT
T ss_pred ------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccC
Confidence 1234567899999999999999998 699999988632
Q ss_pred -CCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 280 -DKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 -~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++++++++||.++ +.++++.+.+.++|
T Consensus 241 ~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl 271 (306)
T 3vis_A 241 TDKAYLELDGASHFAPNITNKTIGMYSVAWL 271 (306)
T ss_dssp SCEEEEEETTCCTTGGGSCCHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchhhchhHHHHHHHHHH
Confidence 578999999999999 88998888887653
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=202.42 Aligned_cols=235 Identities=14% Similarity=0.079 Sum_probs=164.3
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCC---CcCCCCccc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQG---HGFSDGLVA 105 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~ 105 (308)
..+...+...+|.++.+..+.|.+..++.|+||++||.+... ...|..+++.|+++||.|+++|+|| +|.+.....
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~ 411 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKI 411 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred cceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhh
Confidence 345677888899999999999876445689999999987652 1245688999999999999999999 565532222
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
.........+|+.++++++..... ..+++++|||+||.+++.++.++|++++++|+++|............
T Consensus 412 ~~~~~~~~~~d~~~~~~~l~~~~~-~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~-------- 482 (582)
T 3o4h_A 412 IGDPCGGELEDVSAAARWARESGL-ASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSD-------- 482 (582)
T ss_dssp TTCTTTHHHHHHHHHHHHHHHTTC-EEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCC--------
T ss_pred hhhcccccHHHHHHHHHHHHhCCC-cceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhccc--------
Confidence 212334567899999998877632 12899999999999999999999999999999998543211000000
Q ss_pred hhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 186 VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
... .. ....... . .. ..+.. ......+.++++|+|+++|++|..+|
T Consensus 483 -------------------~~~-~~-~~~~~~~------~--~~----~~~~~-~sp~~~~~~i~~P~lii~G~~D~~v~ 528 (582)
T 3o4h_A 483 -------------------AAF-RN-FIEQLTG------G--SR----EIMRS-RSPINHVDRIKEPLALIHPQNASRTP 528 (582)
T ss_dssp -------------------HHH-HH-HHHHHTT------T--CH----HHHHH-TCGGGGGGGCCSCEEEEEETTCSSSC
T ss_pred -------------------chh-HH-HHHHHcC------c--CH----HHHHh-cCHHHHHhcCCCCEEEEecCCCCCcC
Confidence 000 00 0000000 0 00 00000 12234467789999999999999999
Q ss_pred hHHHHHHHHHhcC--CCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 266 PACVEELYKRAAS--KDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 266 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
++.++.+++.++. .++++++++++||.+. ++++++.+.+.++
T Consensus 529 ~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 574 (582)
T 3o4h_A 529 LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFF 574 (582)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHH
Confidence 9999999998853 3489999999999987 5667777777665
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=173.53 Aligned_cols=193 Identities=18% Similarity=0.140 Sum_probs=141.7
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEe--cCCCCcCCCCcc---ccCCCcch
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI--DHQGHGFSDGLV---AHIPDLNP 112 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~--d~~G~G~s~~~~---~~~~~~~~ 112 (308)
+.+|.+++|...+.. +++|+||++||++++.. .|..+.+.|.+ ||.|+++ |++|+|.|.... ...++...
T Consensus 21 ~~~~~~~~~~~~~~~---~~~~~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~ 95 (226)
T 2h1i_A 21 QSNAMMKHVFQKGKD---TSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEED 95 (226)
T ss_dssp HHHSSSCEEEECCSC---TTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred cCCCceeEEecCCCC---CCCcEEEEEecCCCChh-HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhh
Confidence 346778887664432 35899999999998877 56788899987 8999999 999999875321 11124444
Q ss_pred HHHH---HHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 113 VVED---AISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 113 ~~~d---~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+.++ +.++++.+..... +..+++++|||+||.+++.++.++|++++++|+++|......
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------- 158 (226)
T 2h1i_A 96 LIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-----------------
Confidence 4444 4555555444432 456999999999999999999999999999999998643210
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
......+++|+++++|++|.+++.+.
T Consensus 159 ------------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~ 184 (226)
T 2h1i_A 159 ------------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAE 184 (226)
T ss_dssp ------------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHH
T ss_pred ------------------------------------------------------cccccccCCcEEEEeCCCCCcCCHHH
Confidence 01112347899999999999999999
Q ss_pred HHHHHHHhcCCCCcEE-EecCCccccc-CCchhhHHHhhh
Q 035721 269 VEELYKRAASKDKTLS-IYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
.+.+.+.++..+.... +++++||.+. +.++.+.+.+.+
T Consensus 185 ~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~ 224 (226)
T 2h1i_A 185 SEELKVLLENANANVTMHWENRGHQLTMGEVEKAKEWYDK 224 (226)
T ss_dssp HHHHHHHHHTTTCEEEEEEESSTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999864333333 9999999998 666666655544
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=170.31 Aligned_cols=169 Identities=14% Similarity=0.132 Sum_probs=126.7
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.|+||++||++++.. .+...+...|.++||+|+++|+| .|.. .+++++++++.++++.+ .. ++++
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~-----~~~~~~~~~~~~~~~~~-~~-----~~~l 69 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ-----PRLEDWLDTLSLYQHTL-HE-----NTYL 69 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS-----CCHHHHHHHHHTTGGGC-CT-----TEEE
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC-----CCHHHHHHHHHHHHHhc-cC-----CEEE
Confidence 567999999998876 34334445788889999999999 2222 16778888888888776 44 9999
Q ss_pred EEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 137 YSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
+|||+||.+++.++.++|+ +++++|++++........ .. +. .+..
T Consensus 70 ~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~------~~----~~-------------~~~~---------- 116 (192)
T 1uxo_A 70 VAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL------QM----LD-------------EFTQ---------- 116 (192)
T ss_dssp EEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC------GG----GG-------------GGTC----------
T ss_pred EEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccc------hh----hh-------------hhhh----------
Confidence 9999999999999999999 999999999865432100 00 00 0000
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+ . +. ..+.++++|+++++|++|.++|++.++.+.+.+ ++++++++++||+++
T Consensus 117 ----~~------~-------------~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~ 169 (192)
T 1uxo_A 117 ----GS------F-------------DH-QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLE 169 (192)
T ss_dssp ----SC------C-------------CH-HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCG
T ss_pred ----cC------C-------------CH-HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc---CceEEEeCCCcCccc
Confidence 00 0 00 223456789999999999999999999999887 579999999999999
Q ss_pred -CCchhh
Q 035721 295 -GEPEEN 300 (308)
Q Consensus 295 -~~~~~~ 300 (308)
++++++
T Consensus 170 ~~~~~~~ 176 (192)
T 1uxo_A 170 DEGFTSL 176 (192)
T ss_dssp GGTCSCC
T ss_pred ccccccH
Confidence 888665
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=186.80 Aligned_cols=228 Identities=18% Similarity=0.183 Sum_probs=153.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc--cc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV--AH 106 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~ 106 (308)
+..+...+.+.+|.+|.+..+.|.+...+.|+||++||++++.. ++ .....|.++||.|+++|+||+|.|.... ..
T Consensus 66 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~-~~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~ 143 (337)
T 1vlq_A 66 VEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FP-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTPD 143 (337)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CG-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCCB
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCC-Cc-hhhcchhhCCCEEEEecCCCCCCcccCCCCcc
Confidence 34566778888999999999988763356799999999988765 33 3445677889999999999999775320 00
Q ss_pred ----------------------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 107 ----------------------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 107 ----------------------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
.+.+...++|+.++++++..... +..+++++|||+||.+++.++.++| +++++|+.
T Consensus 144 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~ 222 (337)
T 1vlq_A 144 YPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCD 222 (337)
T ss_dssp CCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEE
T ss_pred cccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEEC
Confidence 01123678899999999976532 3458999999999999999999998 59999999
Q ss_pred CCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh
Q 035721 164 GAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQ 243 (308)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (308)
+|...... .... .... ..+ ........... ............ .+..
T Consensus 223 ~p~~~~~~---------~~~~----~~~~------------~~~--~~~~~~~~~~~------~~~~~~~~~~~~-~~~~ 268 (337)
T 1vlq_A 223 VPFLCHFR---------RAVQ----LVDT------------HPY--AEITNFLKTHR------DKEEIVFRTLSY-FDGV 268 (337)
T ss_dssp SCCSCCHH---------HHHH----HCCC------------TTH--HHHHHHHHHCT------TCHHHHHHHHHT-TCHH
T ss_pred CCcccCHH---------HHHh----cCCC------------cch--HHHHHHHHhCc------hhHHHHHHhhhh-ccHH
Confidence 88543110 0000 0000 000 00000111110 001111111110 1223
Q ss_pred hhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 244 GRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
..+.++++|+++++|++|.++|++.+..+++.++. ++++++++++||.+.
T Consensus 269 ~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 269 NFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGG 318 (337)
T ss_dssp HHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTT
T ss_pred HHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCc
Confidence 34567889999999999999999999999999863 589999999999965
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=169.26 Aligned_cols=174 Identities=11% Similarity=-0.051 Sum_probs=125.3
Q ss_pred CcceEEEEccCCCcc---chHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCC
Q 035721 57 TLGVLCVVHGFTGES---SWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDL 132 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~ 132 (308)
++|+|||+||++++. ..+...+.+.|.+. ||+|+++|+||++. .+..+++..+++.+.. ..
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~-----------~~~~~~~~~~~~~l~~----~~ 67 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT-----------ARESIWLPFMETELHC----DE 67 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT-----------CCHHHHHHHHHHTSCC----CT
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc-----------ccHHHHHHHHHHHhCc----CC
Confidence 468999999999884 32333488889887 99999999998631 2345666666666544 13
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHH
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK 212 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (308)
+++++|||+||.+++.++.++| ++++|++++....... . ..... .+...
T Consensus 68 ~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~-----~----~~~~~-------------~~~~~------- 116 (194)
T 2qs9_A 68 KTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGD-----E----NERAS-------------GYFTR------- 116 (194)
T ss_dssp TEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTC-----H----HHHHT-------------STTSS-------
T ss_pred CEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccch-----h----hhHHH-------------hhhcc-------
Confidence 9999999999999999999998 9999999986542110 0 00000 00000
Q ss_pred HHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccc
Q 035721 213 RKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQ 292 (308)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 292 (308)
.... +.+.++.+|+++++|++|.++|++.++.+.+.+ ++++++++++||+
T Consensus 117 -------------~~~~--------------~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~~gH~ 166 (194)
T 2qs9_A 117 -------------PWQW--------------EKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL---ETKLHKFTDCGHF 166 (194)
T ss_dssp -------------CCCH--------------HHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEESSCTTS
T ss_pred -------------cccH--------------HHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc---CCeEEEeCCCCCc
Confidence 0000 111224579999999999999999999999888 5799999999999
Q ss_pred cc-CCchhhHHHhhhc
Q 035721 293 LI-GEPEENVELVFGE 307 (308)
Q Consensus 293 ~~-~~~~~~~~~i~~~ 307 (308)
++ ++|+.+.+.+ ++
T Consensus 167 ~~~~~p~~~~~~~-~f 181 (194)
T 2qs9_A 167 QNTEFHELITVVK-SL 181 (194)
T ss_dssp CSSCCHHHHHHHH-HH
T ss_pred cchhCHHHHHHHH-HH
Confidence 99 8888776544 44
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=170.46 Aligned_cols=180 Identities=15% Similarity=0.156 Sum_probs=137.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHH--cCCeEEEecCC-------------------CCcCCCCccccCCCcchHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAK--SGFATCAIDHQ-------------------GHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~g~~v~~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 114 (308)
.++|+||++||++++.. .|..+++.|.+ .||.|+++|+| |+|.+... ...++++.+
T Consensus 12 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--~~~~~~~~~ 88 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI--SLEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE--CHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc--chHHHHHHH
Confidence 45899999999998877 56789999987 89999998766 44433221 123567778
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH-hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL-RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
+++..+++.+.....+..+++++|||+||.+++.++. ++|++++++|++++.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~----------------------- 145 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF----------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC-----------------------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc-----------------------
Confidence 8898998888542114459999999999999999999 9999999999999864420
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.+.... ....+++|+++++|++|.+++++.++.+.
T Consensus 146 -------~~~~~~--------------------------------------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 180 (218)
T 1auo_A 146 -------GDELEL--------------------------------------SASQQRIPALCLHGQYDDVVQNAMGRSAF 180 (218)
T ss_dssp -------CTTCCC--------------------------------------CHHHHTCCEEEEEETTCSSSCHHHHHHHH
T ss_pred -------hhhhhh--------------------------------------hhcccCCCEEEEEeCCCceecHHHHHHHH
Confidence 000000 00235789999999999999999999999
Q ss_pred HHhcCC--CCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 274 KRAASK--DKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 274 ~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.++.. ++++++++ +||.++ +.++++.+.+.++
T Consensus 181 ~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~ 216 (218)
T 1auo_A 181 EHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAAR 216 (218)
T ss_dssp HHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHH
Confidence 998632 58999999 999999 8777776666543
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=170.20 Aligned_cols=179 Identities=17% Similarity=0.181 Sum_probs=137.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHH--cCCeEEEecCC-------------------CCcCCCCccccCCCcchHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAK--SGFATCAIDHQ-------------------GHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~g~~v~~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 114 (308)
.++|+||++||++++.. .|..+++.|++ .||.|+++|+| |+|.+.... ..++++.+
T Consensus 22 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~--~~~~~~~~ 98 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAID--EDQLNASA 98 (226)
T ss_dssp TCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBC--HHHHHHHH
T ss_pred CCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccccc--chhHHHHH
Confidence 45899999999998877 56889999987 89999998776 555432221 23567778
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH-hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL-RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
+++..+++.+.....+..+++++|||+||.+++.++. ++|++++++|++++........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~-------------------- 158 (226)
T 3cn9_A 99 DQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL-------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC--------------------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh--------------------
Confidence 8888888887542103459999999999999999999 9999999999999854321000
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
. -....+++|+++++|++|.+++++.++.+.
T Consensus 159 -----~--------------------------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~ 189 (226)
T 3cn9_A 159 -----A--------------------------------------------LDERHKRIPVLHLHGSQDDVVDPALGRAAH 189 (226)
T ss_dssp -----C--------------------------------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHHH
T ss_pred -----h--------------------------------------------hcccccCCCEEEEecCCCCccCHHHHHHHH
Confidence 0 001356789999999999999999999999
Q ss_pred HHhcCC--CCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 274 KRAASK--DKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 274 ~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.++.. ++++++++ +||.++ +.++++.+.+.+.
T Consensus 190 ~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~ 225 (226)
T 3cn9_A 190 DALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKR 225 (226)
T ss_dssp HHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHhh
Confidence 988532 58999999 999998 7777666655443
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=176.04 Aligned_cols=178 Identities=15% Similarity=0.158 Sum_probs=136.5
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEe--cCCCCcCCCCcc---ccCCC---cchHHHHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI--DHQGHGFSDGLV---AHIPD---LNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~--d~~G~G~s~~~~---~~~~~---~~~~~~d~~~~l~~~~~~ 127 (308)
.+.|+||++||++++.. .|..+++.|++. |.|+++ |++|+|.|.... ....+ +.+.++|+.++++.+...
T Consensus 60 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-QFFDFGARLLPQ-ATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 137 (251)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHSTT-SEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-HHHHHHHhcCCC-ceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 35799999999998877 668899999775 999999 899999775311 11112 333467777777776554
Q ss_pred cCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccc
Q 035721 128 HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207 (308)
Q Consensus 128 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (308)
. +..+++++|||+||.+++.++.++|++++++|++++......
T Consensus 138 ~-~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------------ 180 (251)
T 2r8b_A 138 Y-QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------------ 180 (251)
T ss_dssp H-TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------------
T ss_pred c-CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------------
Confidence 3 556999999999999999999999999999999998643210
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEE-Ee
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLS-IY 286 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-~~ 286 (308)
......+++|+++++|++|.+++.+.++.+.+.++..+.++. .+
T Consensus 181 -----------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 225 (251)
T 2r8b_A 181 -----------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVW 225 (251)
T ss_dssp -----------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEE
T ss_pred -----------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 011234578999999999999999999999999852245555 78
Q ss_pred cCCccccc-CCchhhHHHhhhc
Q 035721 287 PGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 287 ~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+++||.++ +.++.+.+.+.+.
T Consensus 226 ~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 226 HPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp ESSCSSCCHHHHHHHHHHHGGG
T ss_pred cCCCCccCHHHHHHHHHHHHHh
Confidence 88999999 8788777766554
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=169.87 Aligned_cols=185 Identities=12% Similarity=-0.027 Sum_probs=120.8
Q ss_pred cceEEEEccCCCccchH-HHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWI-VQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~-~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.|+||++||++++...+ ...+.+.+.+. +|+|+++|+||+|.+ ..+++..+++.... +++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~------------~~~~l~~~~~~~~~-----~~i 64 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE------------AAEMLESIVMDKAG-----QSI 64 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH------------HHHHHHHHHHHHTT-----SCE
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH------------HHHHHHHHHHhcCC-----CcE
Confidence 37899999998776533 34566777665 499999999999842 35566666655544 499
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
+|+|+||||.+|+.+|.++|..+..++...+..... ......... . ............
T Consensus 65 ~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~---~-~~~~~~~~~~~~-- 122 (202)
T 4fle_A 65 GIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELL----------------SDYLGENQN---P-YTGQKYVLESRH-- 122 (202)
T ss_dssp EEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHG----------------GGGCEEEEC---T-TTCCEEEECHHH--
T ss_pred EEEEEChhhHHHHHHHHHhcccchheeeccchHHHH----------------HHhhhhhcc---c-cccccccchHHH--
Confidence 999999999999999999998766665444321100 000000000 0 000001111100
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
............++++|+|+++|++|.++|++.+.+++ +++++.+++|+||.+
T Consensus 123 ---------------------~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~-----~~~~l~i~~g~~H~~- 175 (202)
T 4fle_A 123 ---------------------IYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY-----TPCRQTVESGGNHAF- 175 (202)
T ss_dssp ---------------------HHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT-----TTSEEEEESSCCTTC-
T ss_pred ---------------------HHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh-----hCCEEEEECCCCcCC-
Confidence 11112233446678999999999999999998887764 468999999999964
Q ss_pred CCchhhHHHhhhcC
Q 035721 295 GEPEENVELVFGEM 308 (308)
Q Consensus 295 ~~~~~~~~~i~~~i 308 (308)
.+.+++.+.|.++|
T Consensus 176 ~~~~~~~~~I~~FL 189 (202)
T 4fle_A 176 VGFDHYFSPIVTFL 189 (202)
T ss_dssp TTGGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 45667788887663
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=188.27 Aligned_cols=237 Identities=12% Similarity=-0.022 Sum_probs=149.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
.+.+...+.. +|.++.+..+.|... .+.|+||++||++++...++..+.+.|.+.||.|+++|+||+|.|...... .
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~~-~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-~ 242 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNTD-KPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT-E 242 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCSS-SCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC-S
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCCC-CCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC-C
Confidence 3445555655 788999988888753 568999999999988655666778888889999999999999999864332 2
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC--CCchhhhhHHHh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK--PPWPLEHLLFTV 186 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~ 186 (308)
+......++.+.+.....- +..+++++|||+||.+++.++..+|++++++|+++|......... ...........+
T Consensus 243 ~~~~~~~~v~~~l~~~~~v--d~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (415)
T 3mve_A 243 DYSRLHQAVLNELFSIPYV--DHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVL 320 (415)
T ss_dssp CTTHHHHHHHHHGGGCTTE--EEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcCC--CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHHHHHHHH
Confidence 4555554444444333211 345899999999999999999999999999999998642110000 000000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhh--h--cCCCCcceEEEeeCCCc
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQG--R--FEEVEVPMLICHGGDDV 262 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~i~~P~l~i~g~~D~ 262 (308)
...... ............. . ..... . ..++++|+|+++|++|.
T Consensus 321 ~~~~g~------------~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~~i~~PvLii~G~~D~ 367 (415)
T 3mve_A 321 ASRLGK------------SVVDIYSLSGQMA--------------------A-WSLKVQGFLSSRKTKVPILAMSLEGDP 367 (415)
T ss_dssp HHHTTC------------SSBCHHHHHHHGG--------------------G-GCTTTTTTTTSSCBSSCEEEEEETTCS
T ss_pred HHHhCC------------CccCHHHHHHHHh--------------------h-cCcccccccccCCCCCCEEEEEeCCCC
Confidence 000000 0000000000000 0 00000 1 35789999999999999
Q ss_pred ccChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 263 VCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
++|++.++.+.+.. ++++++++++..+ ++.++++.+.+.++
T Consensus 368 ~vp~~~~~~l~~~~--~~~~l~~i~g~~~--h~~~~~~~~~i~~f 408 (415)
T 3mve_A 368 VSPYSDNQMVAFFS--TYGKAKKISSKTI--TQGYEQSLDLAIKW 408 (415)
T ss_dssp SSCHHHHHHHHHTB--TTCEEEEECCCSH--HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC--CCceEEEecCCCc--ccchHHHHHHHHHH
Confidence 99999999988865 6899999998322 12444455555443
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=196.93 Aligned_cols=230 Identities=15% Similarity=0.146 Sum_probs=161.3
Q ss_pred cceeEEcCCC-cEEEEEEecCCCC--CCCcceEEEEccCCCccc--hHHHH----HHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 32 SSEYITNSRG-LRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS--WIVQL----TAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 32 ~~~~~~~~~g-~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~--~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
+...+...+| .++.+..+.|.+. ..+.|+||++||.+.... ..|.. +++.|+++||.|+++|+||+|.+..
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 4556777889 8999999988752 234689999999776542 12333 6888988999999999999999865
Q ss_pred ccccC--CCc-chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 103 LVAHI--PDL-NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 103 ~~~~~--~~~-~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
..... ..+ ....+|+.++++++..... +..+++++|||+||.+++.++.++|++++++|+++|.......
T Consensus 536 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~------ 609 (706)
T 2z3z_A 536 AFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY------ 609 (706)
T ss_dssp HHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS------
T ss_pred hHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH------
Confidence 42210 011 2345888888888865421 3458999999999999999999999999999999986542100
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
.. .....+...+.. ... .+.. .+....+.++++|+|+++|
T Consensus 610 ~~------------------------------~~~~~~~~~~~~-----~~~----~~~~-~~~~~~~~~i~~P~lii~G 649 (706)
T 2z3z_A 610 AI------------------------------MYGERYFDAPQE-----NPE----GYDA-ANLLKRAGDLKGRLMLIHG 649 (706)
T ss_dssp BH------------------------------HHHHHHHCCTTT-----CHH----HHHH-HCGGGGGGGCCSEEEEEEE
T ss_pred Hh------------------------------hhhhhhcCCccc-----Chh----hhhh-CCHhHhHHhCCCCEEEEee
Confidence 00 000000000000 000 0000 2334556788999999999
Q ss_pred CCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++|..++++.++++++.++ +.++++.+++++||.+. ++++++.+.+.++
T Consensus 650 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 701 (706)
T 2z3z_A 650 AIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRY 701 (706)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHH
Confidence 9999999999999988884 24579999999999998 7778888877765
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-26 Score=199.47 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=164.1
Q ss_pred cccceeEEcCCC-cEEEEEEecCCC--CCCCcceEEEEccCCCccc--hHHH-----HHHHHHHHcCCeEEEecCCCCcC
Q 035721 30 SHSSEYITNSRG-LRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS--WIVQ-----LTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 30 ~~~~~~~~~~~g-~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~--~~~~-----~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
..+...+.+.+| .++.+..+.|.+ ...+.|+||++||++++.. ..|. .+++.|+++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 345667888899 999999998875 2245689999999887641 1222 57888999999999999999999
Q ss_pred CCCcccc--CCCc-chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC
Q 035721 100 SDGLVAH--IPDL-NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP 175 (308)
Q Consensus 100 s~~~~~~--~~~~-~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~ 175 (308)
|...... ...+ ...++|+.++++++..... +..+++++|||+||.+++.++.++|++++++|+++|.......
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--- 642 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLY--- 642 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGS---
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhh---
Confidence 8653221 1112 2347888999998876422 4468999999999999999999999999999999986542200
Q ss_pred CchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 176 PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
... ....+...+. ... ..+.. .+....+.++++|+|+
T Consensus 643 ---~~~------------------------------~~~~~~~~~~-----~~~----~~~~~-~~~~~~~~~i~~P~li 679 (741)
T 2ecf_A 643 ---DSH------------------------------YTERYMDLPA-----RND----AGYRE-ARVLTHIEGLRSPLLL 679 (741)
T ss_dssp ---BHH------------------------------HHHHHHCCTG-----GGH----HHHHH-HCSGGGGGGCCSCEEE
T ss_pred ---ccc------------------------------cchhhcCCcc-----cCh----hhhhh-cCHHHHHhhCCCCEEE
Confidence 000 0000000000 000 00000 1223456788899999
Q ss_pred EeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 256 CHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++|++|..++++.++.+++.++. .++++++++++||.+. +.++++.+.+.++
T Consensus 680 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 734 (741)
T 2ecf_A 680 IHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAF 734 (741)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHH
T ss_pred EccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHH
Confidence 99999999999999999988853 3469999999999998 7667777777665
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=167.74 Aligned_cols=187 Identities=14% Similarity=0.072 Sum_probs=133.8
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEec-------------CCCCcCCCCccccC
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID-------------HQGHGFSDGLVAHI 107 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d-------------~~G~G~s~~~~~~~ 107 (308)
|..+.|....+.+ .+.| ||++||++++.. .|..+++.|. .++.|+++| ++|+|.+.......
T Consensus 2 G~~~~~~~~~~~~--~~~p-vv~lHG~g~~~~-~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~ 76 (209)
T 3og9_A 2 GHMTDYVFKAGRK--DLAP-LLLLHSTGGDEH-QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDL 76 (209)
T ss_dssp --CCCEEEECCCT--TSCC-EEEECCTTCCTT-TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCH
T ss_pred CCcceEEEeCCCC--CCCC-EEEEeCCCCCHH-HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCH
Confidence 3345554443322 3467 999999998887 5578888887 579999999 67777654332221
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
......++++.++++.+....+ +..+++++|||+||.+++.++.++|++++++|++++.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------- 142 (209)
T 3og9_A 77 ESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------
Confidence 2445556777777777655432 4469999999999999999999999999999999985331100
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
......++|+++++|++|.++|+
T Consensus 143 ---------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~~ 165 (209)
T 3og9_A 143 ---------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVPQ 165 (209)
T ss_dssp ---------------------------------------------------------CCCCCTTCEEEEEECTTCSSSCH
T ss_pred ---------------------------------------------------------ccccccCCCEEEEcCCCCCccCH
Confidence 00124568999999999999999
Q ss_pred HHHHHHHHHhcCC--CCcEEEecCCccccc-CCchhhHHHh
Q 035721 267 ACVEELYKRAASK--DKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 267 ~~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
+.++.+.+.+... .+++++++ +||.+. +..+.+.+.+
T Consensus 166 ~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l 205 (209)
T 3og9_A 166 KNFGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWL 205 (209)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHH
Confidence 9999998888532 36778887 899987 5555544443
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=172.63 Aligned_cols=206 Identities=10% Similarity=0.018 Sum_probs=135.9
Q ss_pred CCcceEEEEccCCCc----cchHHHHHHHHH----HHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTGE----SSWIVQLTAVLF----AKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~----~~~~~~~~~~~l----~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
.+.|+||++||.+.. ....|..+++.| .+.||.|+++|+|+.+.+ ......+|+.++++++...
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~--------~~~~~~~d~~~~~~~l~~~ 110 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNITRLVKE 110 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC--------CCCcHHHHHHHHHHHHHHh
Confidence 458899999996522 223567888888 577999999999986643 3344566777777666554
Q ss_pred cCCCCCEEEEEechhhHHHHHHHHhc-----------------CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 128 HAPDLPAFLYSESLGGAIALYITLRQ-----------------KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 128 ~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
. +..+++++|||+||.+|+.++.++ |++++++|++++........... ..........+
T Consensus 111 ~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~ 186 (273)
T 1vkh_A 111 K-GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY---PEYDCFTRLAF 186 (273)
T ss_dssp H-TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC---GGGHHHHHHHC
T ss_pred C-CcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc---ccHHHHHHHHh
Confidence 3 556999999999999999999986 78899999998864321100000 00000000000
Q ss_pred CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHH
Q 035721 191 PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVE 270 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 270 (308)
. .....+.. ....... .....+..+++|+++++|++|.++|++.++
T Consensus 187 ~--------------------------~~~~~~~~--~~~~~~~------~~~~~~~~~~~P~lii~G~~D~~vp~~~~~ 232 (273)
T 1vkh_A 187 P--------------------------DGIQMYEE--EPSRVMP------YVKKALSRFSIDMHLVHSYSDELLTLRQTN 232 (273)
T ss_dssp T--------------------------TCGGGCCC--CHHHHHH------HHHHHHHHHTCEEEEEEETTCSSCCTHHHH
T ss_pred c--------------------------ccccchhh--cccccCh------hhhhcccccCCCEEEEecCCcCCCChHHHH
Confidence 0 00000000 0000000 011122236789999999999999999999
Q ss_pred HHHHHhcC--CCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 271 ELYKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 271 ~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+.+.++. .++++++++++||..+ ++ +++.+.+.++|
T Consensus 233 ~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 233 CLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred HHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 99988853 3589999999999998 77 88888888765
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=162.87 Aligned_cols=163 Identities=13% Similarity=0.002 Sum_probs=125.1
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|||+||++++...+|......+.. .++.+|++|++. ++++++++|+.++++.+. . +++++
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~-~-----~~~l~ 79 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP---HWQRIRQREWYQ--------ADLDRWVLAIRRELSVCT-Q-----PVILI 79 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT---TSEECCCSCCSS--------CCHHHHHHHHHHHHHTCS-S-----CEEEE
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC---CeEEEeccCCCC--------cCHHHHHHHHHHHHHhcC-C-----CeEEE
Confidence 678999999998874355555554333 357788888752 478888999988887654 3 99999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
|||+||.+++.++.++|++++++|++++....... +...
T Consensus 80 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-----------------------------~~~~------------ 118 (191)
T 3bdv_A 80 GHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE-----------------------------IDDR------------ 118 (191)
T ss_dssp EETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT-----------------------------CTTT------------
T ss_pred EEChHHHHHHHHHHhcCCCccEEEEECCCcccccc-----------------------------Cccc------------
Confidence 99999999999999999999999999986442210 0000
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C-
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G- 295 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~- 295 (308)
..+.++++|+++++|++|.++|++.++.+.+.+ ++++++++++||+++ +
T Consensus 119 --------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~ 169 (191)
T 3bdv_A 119 --------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW---DSELVDVGEAGHINAEAG 169 (191)
T ss_dssp --------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH---TCEEEECCSCTTSSGGGT
T ss_pred --------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc---CCcEEEeCCCCccccccc
Confidence 335678999999999999999999999999887 689999999999988 5
Q ss_pred --CchhhHHHhhhc
Q 035721 296 --EPEENVELVFGE 307 (308)
Q Consensus 296 --~~~~~~~~i~~~ 307 (308)
+..+..+.+.++
T Consensus 170 ~~~~~~~~~~i~~f 183 (191)
T 3bdv_A 170 FGPWEYGLKRLAEF 183 (191)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH
Confidence 333344555443
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=172.34 Aligned_cols=128 Identities=15% Similarity=0.094 Sum_probs=97.8
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~ 105 (308)
..+...+...+| ++.+.++.|... .+.|+||++||++ ++.. .|..+++.|++. ||.|+++|+||+|.+..+
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~~-~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~-- 121 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKKA-AGLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFP-- 121 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSC-SSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTT--
T ss_pred eEEEEEecCCCC-cEEEEEEecCCC-CCCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCC--
Confidence 345666777777 899988888754 4578999999987 6665 557888889875 999999999999987533
Q ss_pred cCCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCC
Q 035721 106 HIPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCG 168 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~ 168 (308)
...+|+.++++++.... + +..+++++|||+||.+|+.++.++|+ +++++|+++|...
T Consensus 122 ------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 122 ------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp ------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 33455555555554321 1 33589999999999999999988775 5999999999765
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=183.74 Aligned_cols=216 Identities=16% Similarity=0.091 Sum_probs=135.6
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
..+.+..+.|.+. .+.|+||++||++++.. ..+++.|+++||.|+++|+||+|.+...... ...+|+.+++
T Consensus 143 ~~l~~~l~~P~~~-~~~P~Vv~~hG~~~~~~---~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~-----~~~~d~~~~~ 213 (422)
T 3k2i_A 143 GRVRATLFLPPGP-GPFPGIIDIFGIGGGLL---EYRASLLAGHGFATLALAYYNFEDLPNNMDN-----ISLEYFEEAV 213 (422)
T ss_dssp TTEEEEEEECSSS-CCBCEEEEECCTTCSCC---CHHHHHHHTTTCEEEEEECSSSTTSCSSCSC-----EETHHHHHHH
T ss_pred CcEEEEEEcCCCC-CCcCEEEEEcCCCcchh---HHHHHHHHhCCCEEEEEccCCCCCCCCCccc-----CCHHHHHHHH
Confidence 3688888888654 56899999999977633 3458889999999999999999987654322 1256777777
Q ss_pred HHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 122 DSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 122 ~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
+++..... +..+++++|||+||.+|+.++.++|+ ++++|++++........ +... ....+.........
T Consensus 214 ~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~ 283 (422)
T 3k2i_A 214 CYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTA---INYK------HSSIPPLGYDLRRI 283 (422)
T ss_dssp HHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSC---EEET------TEEECCCCBCGGGC
T ss_pred HHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCc---hhhc------CCcCCCcccchhhc
Confidence 77766533 45799999999999999999999997 99999998865322110 0000 00000000000000
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH-HHHHHHhcC-
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV-EELYKRAAS- 278 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~- 278 (308)
....... ... .......... ........+.++++|+|+++|++|.+++.+.. +.+.+.+..
T Consensus 284 ~~~~~~~---------~~~-~~~~~~~~~~-------~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~ 346 (422)
T 3k2i_A 284 KVAFSGL---------VDI-VDIRNALVGG-------YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAH 346 (422)
T ss_dssp EECTTSC---------EEC-TTCBCCCTTG-------GGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHT
T ss_pred ccCcchh---------HHH-HHHHhhhhhc-------ccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhc
Confidence 0000000 000 0000000000 00011223567899999999999999998855 566666532
Q ss_pred --CCCcEEEecCCcccc
Q 035721 279 --KDKTLSIYPGMWHQL 293 (308)
Q Consensus 279 --~~~~~~~~~~~gH~~ 293 (308)
+++++++++++||.+
T Consensus 347 g~~~~~l~~~~gagH~~ 363 (422)
T 3k2i_A 347 GKEKPQIICYPGTGHYI 363 (422)
T ss_dssp TCCCCEEEEETTCCSCC
T ss_pred CCCCCEEEEECCCCCEE
Confidence 238999999999998
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=191.80 Aligned_cols=238 Identities=16% Similarity=0.140 Sum_probs=159.1
Q ss_pred ccceeEEcCCCcEEEEEEecCCCC------CCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCC---CcCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPP------AKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQG---HGFS 100 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~------~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G---~G~s 100 (308)
.+...+...+|.++.+.++.|.+. ..+.|+||++||++++.. ..|..+++.|+++||.|+++|+|| +|.+
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 455567777999999999988652 245789999999976543 234678889999999999999999 6665
Q ss_pred CCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh
Q 035721 101 DGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 179 (308)
........--....+|+.++++++..... +..+++|+|||+||.+++.++.. |++++++|+++|.........
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~----- 544 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWAD----- 544 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHT-----
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhc-----
Confidence 43221100112346788888888876633 66799999999999999998885 999999999988644211000
Q ss_pred hhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC
Q 035721 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG 259 (308)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 259 (308)
..... +..... ........ ... ..+.. ......+.++++|+|+++|+
T Consensus 545 --------~~~~~--------------~~~~~~-~~~~~~~~-----~~~----~~~~~-~sp~~~~~~~~~P~lii~G~ 591 (662)
T 3azo_A 545 --------GGTHD--------------FESRYL-DFLIGSFE-----EFP----ERYRD-RAPLTRADRVRVPFLLLQGL 591 (662)
T ss_dssp --------TCSCG--------------GGTTHH-HHHTCCTT-----TCH----HHHHH-TCGGGGGGGCCSCEEEEEET
T ss_pred --------ccccc--------------hhhHhH-HHHhCCCc-----cch----hHHHh-hChHhHhccCCCCEEEEeeC
Confidence 00000 000000 00000000 000 00000 12234567788999999999
Q ss_pred CCcccChHHHHHHHHHhcCC--CCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 260 DDVVCDPACVEELYKRAASK--DKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
+|.++|++.++.+++.++.. .+++++++++||.+. +++.++.+.+.++
T Consensus 592 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~f 643 (662)
T 3azo_A 592 EDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSL 643 (662)
T ss_dssp TCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHH
Confidence 99999999999999999532 359999999999875 5566777766654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=175.27 Aligned_cols=240 Identities=17% Similarity=0.083 Sum_probs=144.5
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---Cccch-HHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSW-IVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
+..+...+...+|..+.+.+|.|.....+.|+||++||.+ ++... .|..+.+.|++.||.|+++|+||+|.|++.
T Consensus 80 ~~~~~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~- 158 (361)
T 1jkm_A 80 VETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH- 158 (361)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE-
T ss_pred ceeeeeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCC-
Confidence 3445566777788789998888876533579999999976 44431 456788999889999999999999866422
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh-----cCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR-----QKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
........|+.++++++..... +..+++|+|||+||.+++.++.. .|++++++|+++|.........
T Consensus 159 ---~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~--- 232 (361)
T 1jkm_A 159 ---HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWD--- 232 (361)
T ss_dssp ---CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSC---
T ss_pred ---CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccc---
Confidence 1344456777777766654310 22399999999999999999988 7878999999999765421100
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEe
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 257 (308)
...... ........ .. ....... .......+......... ..... .......+.++. |+++++
T Consensus 233 -~~~~~~----~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~p-------~~~~~~~l~~l~-P~Lii~ 295 (361)
T 1jkm_A 233 -HERRLT----ELPSLVEN-DG-YFIENGG-MALLVRAYDPTGEHAED-PIAWP-------YFASEDELRGLP-PFVVAV 295 (361)
T ss_dssp -HHHHHH----HCTHHHHT-TT-SSSCHHH-HHHHHHHHSSSSTTTTC-TTTCG-------GGCCHHHHTTCC-CEEEEE
T ss_pred -cccccc----cCcchhhc-cC-cccCHHH-HHHHHHHhCCCCCCCCC-cccCc-------cccChhhHcCCC-ceEEEE
Confidence 000000 00000000 00 0000000 00001111110000000 00000 000123345666 999999
Q ss_pred eCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 258 GGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
|++|.+++ .++.+++.+.. .+++++++++++|.+.
T Consensus 296 G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~ 332 (361)
T 1jkm_A 296 NELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGAD 332 (361)
T ss_dssp ETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHH
T ss_pred cCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCcc
Confidence 99999986 66666766632 4579999999999876
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-25 Score=169.75 Aligned_cols=220 Identities=13% Similarity=-0.006 Sum_probs=138.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.+++|||+||++++.. .|..+.+ | ..+|+|+++|+||++.+... .++++++++++.++++.+... .++++
T Consensus 20 ~~~~lv~lhg~~~~~~-~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~---~~~~~~~~~~~~~~i~~~~~~----~~~~l 89 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAF-SYASLPR-L-KSDTAVVGLNCPYARDPENM---NCTHGAMIESFCNEIRRRQPR----GPYHL 89 (265)
T ss_dssp SSEEEEEECCTTCCGG-GGTTSCC-C-SSSEEEEEEECTTTTCGGGC---CCCHHHHHHHHHHHHHHHCSS----CCEEE
T ss_pred CCCEEEEECCCCCCHH-HHHHHHh-c-CCCCEEEEEECCCCCCCCCC---CCCHHHHHHHHHHHHHHhCCC----CCEEE
Confidence 4788999999998887 5677888 7 45799999999999765432 258888999998888877422 38999
Q ss_pred EEechhhHHHHHHHH---hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHH
Q 035721 137 YSESLGGAIALYITL---RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (308)
+||||||.+|+.+|. .++++++++|++++......... . .................... .........
T Consensus 90 ~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---- 160 (265)
T 3ils_A 90 GGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQL-P---RAFYEHCNSIGLFATQPGAS-PDGSTEPPS---- 160 (265)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCC-C---HHHHHHHHHTTTTTTSSSSC-SSSCSCCCT----
T ss_pred EEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccccc-C---HHHHHHHHHHHHhCCCcccc-ccCCHHHHH----
Confidence 999999999999998 67788999999987644321111 1 11111111111110000000 000000000
Q ss_pred HHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceE-EEeeCC---Cccc--------------ChHHHHHHHH
Q 035721 214 KLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPML-ICHGGD---DVVC--------------DPACVEELYK 274 (308)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l-~i~g~~---D~~~--------------~~~~~~~~~~ 274 (308)
...............+ ......+++|++ +++|++ |..+ +......+.+
T Consensus 161 -------------~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~ 227 (265)
T 3ils_A 161 -------------YLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDT 227 (265)
T ss_dssp -------------THHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHH
T ss_pred -------------HHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHH
Confidence 0000000000000011 112346899988 999999 9987 4444455666
Q ss_pred HhcCCCCcEEEecCCccccc---CCchhhHHHhhhcC
Q 035721 275 RAASKDKTLSIYPGMWHQLI---GEPEENVELVFGEM 308 (308)
Q Consensus 275 ~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~i~~~i 308 (308)
..+..++++++++|+||+++ ++|+++++.|.+++
T Consensus 228 ~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 228 IMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp HSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred hCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 55434789999999999988 77888888887764
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=167.19 Aligned_cols=189 Identities=14% Similarity=0.010 Sum_probs=137.4
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC---CCCcc-----ccCCCc
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF---SDGLV-----AHIPDL 110 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~---s~~~~-----~~~~~~ 110 (308)
.++..+.|..+.+.. .++|+||++||++++.. .|..+.+.|.+ ||.|+++|.+++.. +.... ....++
T Consensus 13 ~~~~~l~~~~~~~~~--~~~p~vv~lHG~g~~~~-~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (223)
T 3b5e_A 13 LTDLAFPYRLLGAGK--ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSI 88 (223)
T ss_dssp BCSSSSCEEEESTTS--SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHH
T ss_pred ccCCCceEEEeCCCC--CCCCEEEEEecCCCCHH-HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHH
Confidence 345567777766543 34689999999998877 55778888876 89999999887421 11000 011134
Q ss_pred chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 111 NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
...++++.++++.+....+ +..+++++|||+||.+|+.++.++|++++++|++++......
T Consensus 89 ~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------ 150 (223)
T 3b5e_A 89 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH------------------ 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc------------------
Confidence 5566788888887765432 446999999999999999999999999999999998543110
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
. .....+++|+++++|++|.+++.+.+
T Consensus 151 -----------~------------------------------------------~~~~~~~~P~li~~G~~D~~v~~~~~ 177 (223)
T 3b5e_A 151 -----------V------------------------------------------PATDLAGIRTLIIAGAADETYGPFVP 177 (223)
T ss_dssp -----------C------------------------------------------CCCCCTTCEEEEEEETTCTTTGGGHH
T ss_pred -----------c------------------------------------------ccccccCCCEEEEeCCCCCcCCHHHH
Confidence 0 01123578999999999999999998
Q ss_pred HHHHHHhcC--CCCcEEEecCCccccc-CCchhhHHHh
Q 035721 270 EELYKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 270 ~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
+ +.+.+.. .++++++++ +||.+. +..+.+.+.+
T Consensus 178 ~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l 213 (223)
T 3b5e_A 178 A-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWL 213 (223)
T ss_dssp H-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHH
T ss_pred H-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHH
Confidence 8 8888752 257999999 999998 6655544443
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=160.14 Aligned_cols=178 Identities=15% Similarity=0.135 Sum_probs=126.0
Q ss_pred EecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC-----ccccCCCcchHHHHHHHHHH
Q 035721 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG-----LVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 48 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-----~~~~~~~~~~~~~d~~~~l~ 122 (308)
..+.+.. +.+++||++||++++.. .|..+++.|...|+.|+++|.+|++.-+. .......+++..+.+..+++
T Consensus 13 ~~g~P~~-~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 13 TSGVPVQ-RAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVA 90 (210)
T ss_dssp EEESCTT-TCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHH
T ss_pred eCCCCcc-cCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHH
Confidence 3444333 45889999999998876 45678888887899999999998764221 11111123344455556666
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCC
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL 202 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (308)
.+....-+.++++++|+|+||.+++.++.++|+++.++|.+++.......
T Consensus 91 ~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~------------------------------ 140 (210)
T 4h0c_A 91 EIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL------------------------------ 140 (210)
T ss_dssp HHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC------------------------------
T ss_pred HHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh------------------------------
Confidence 55443115679999999999999999999999999999998874321100
Q ss_pred CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CC
Q 035721 203 PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KD 280 (308)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~ 280 (308)
... . ......++|++++||++|+++|.+.++++.+.+.. .+
T Consensus 141 ~~~-----------------------------------~--~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~ 183 (210)
T 4h0c_A 141 AIG-----------------------------------N--YKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAA 183 (210)
T ss_dssp CGG-----------------------------------G--CCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCE
T ss_pred hhh-----------------------------------h--hhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCC
Confidence 000 0 00112257999999999999999999988887753 35
Q ss_pred CcEEEecCCccccc
Q 035721 281 KTLSIYPGMWHQLI 294 (308)
Q Consensus 281 ~~~~~~~~~gH~~~ 294 (308)
++++++|+.||.+.
T Consensus 184 v~~~~ypg~gH~i~ 197 (210)
T 4h0c_A 184 VSQVVYPGRPHTIS 197 (210)
T ss_dssp EEEEEEETCCSSCC
T ss_pred eEEEEECCCCCCcC
Confidence 78999999999876
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=171.23 Aligned_cols=243 Identities=17% Similarity=0.123 Sum_probs=143.7
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCC---CCCcceEEEEccCCCcc---c-hHHHHHHHHHH-HcCCeEEEecCCCCcCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPP---AKTLGVLCVVHGFTGES---S-WIVQLTAVLFA-KSGFATCAIDHQGHGFS 100 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~-~~g~~v~~~d~~G~G~s 100 (308)
+..+...+.. +..+.++.|.|... ..+.|+||++||.+... . ..|..++..|+ +.||.|+++|+||++.+
T Consensus 53 v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 130 (338)
T 2o7r_A 53 VLTKDLALNP--LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130 (338)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT
T ss_pred EEEEEEEecC--CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC
Confidence 4444555544 44566666766532 24578999999977322 2 23678888887 67999999999997754
Q ss_pred CCccccCCCcchHHHHHHHHHHHHHHhc------C-CCCCEEEEEechhhHHHHHHHHhcCC--------CccEEEEeCC
Q 035721 101 DGLVAHIPDLNPVVEDAISFFDSFRARH------A-PDLPAFLYSESLGGAIALYITLRQKG--------AWDGLILNGA 165 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~------~-~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~ 165 (308)
......+|+.++++++.... . +..+++|+|||+||.+|+.++.++|+ +++++|+++|
T Consensus 131 --------~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p 202 (338)
T 2o7r_A 131 --------RLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEP 202 (338)
T ss_dssp --------CTTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESC
T ss_pred --------CCchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECC
Confidence 34456788888888887531 0 22589999999999999999999988 8999999998
Q ss_pred cCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCC--CCcchHHHHHHHHHHHHHhh
Q 035721 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRP--VARPRAATALELLRVSRDLQ 243 (308)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 243 (308)
......... .... . .. . ........+..+........... ...+.... ... ...
T Consensus 203 ~~~~~~~~~------~~~~---~-~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~ 258 (338)
T 2o7r_A 203 GFGGSKRTG------SELR---L-AN-------D-SRLPTFVLDLIWELSLPMGADRDHEYCNPTAES-EPL-----YSF 258 (338)
T ss_dssp CCCCSSCCH------HHHH---T-TT-------C-SSSCHHHHHHHHHHHSCTTCCTTSTTTCCC-----CC-----THH
T ss_pred ccCCCcCCh------hhhc---c-CC-------C-cccCHHHHHHHHHHhCCCCCCCCCcccCCCCCC-ccc-----ccH
Confidence 765332110 0000 0 00 0 00000000000000000000000 00000000 000 001
Q ss_pred hhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 244 GRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
+.+..+.+|+|+++|++|.+++. ...+.+.+. +.++++++++++||.++ .++ +++.+.+.++
T Consensus 259 ~~l~~~~~P~Lvi~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~F 326 (338)
T 2o7r_A 259 DKIRSLGWRVMVVGCHGDPMIDR--QMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKF 326 (338)
T ss_dssp HHHHHHTCEEEEEEETTSTTHHH--HHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCEEEEECCCCcchHH--HHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHH
Confidence 22334567999999999998863 344444442 24689999999999988 777 6666666654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=170.98 Aligned_cols=214 Identities=19% Similarity=0.207 Sum_probs=120.6
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
++++|||+||++++.. .|+.+++.|.+ +|+|+++|+||||.|... ..+++.+.+..+++.++.. ...++++
T Consensus 12 ~~~~lv~lhg~g~~~~-~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~-----~~~~~~~~~~~~~~~l~~~--~~~~~~l 82 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSA-SFRPLHAFLQG-ECEMLAAEPPGHGTNQTS-----AIEDLEELTDLYKQELNLR--PDRPFVL 82 (242)
T ss_dssp CCCEEESSCCCCHHHH-HHHHHHHHHCC-SCCCEEEECCSSCCSCCC-----TTTHHHHHHHHTTTTCCCC--CCSSCEE
T ss_pred CCceEEEECCCCCCHH-HHHHHHHhCCC-CeEEEEEeCCCCCCCCCC-----CcCCHHHHHHHHHHHHHhh--cCCCEEE
Confidence 4678999999998876 77899999976 599999999999999642 2233333333333333221 2358999
Q ss_pred EEechhhHHHHHHHHh------cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH
Q 035721 137 YSESLGGAIALYITLR------QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~------~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
+||||||.+|+.+|.+ +|++ +++.+............... ........... . ........+.
T Consensus 83 vGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~-~~~~~~~~~~ 150 (242)
T 2k2q_B 83 FGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVSHLP--DDQFLDHIIQL------G-GMPAELVENK 150 (242)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCSSCT--THHHHHTTCCT------T-CCCCTTTHHH
T ss_pred EeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccccCCC--HHHHHHHHHHh------C-CCChHHhcCH
Confidence 9999999999999987 4553 44433211110000000000 00111111000 0 0011111100
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCC
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGM 289 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (308)
.... .. ....... ....... ...+.++++|+++++|++|.+++ .....+.+.. ++.++++++ +
T Consensus 151 ----~~~~----~~-~~~~~~~---~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~--~~~~~~~~~-~ 214 (242)
T 2k2q_B 151 ----EVMS----FF-LPSFRSD---YRALEQFELYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWA--KDITFHQFD-G 214 (242)
T ss_dssp ----HTTT----TC-CSCHHHH---HHHHTCCCCSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTC--CCSEEEEEE-C
T ss_pred ----HHHH----HH-HHHHHHH---HHHHHhcccCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHh--cCCeEEEEe-C
Confidence 0000 00 0111111 1111111 11266799999999999999864 4445554444 466788888 5
Q ss_pred ccccc-CCchhhHHHhhhc
Q 035721 290 WHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 290 gH~~~-~~~~~~~~~i~~~ 307 (308)
||+++ ++|+++++.|.++
T Consensus 215 gH~~~~e~p~~~~~~i~~f 233 (242)
T 2k2q_B 215 GHMFLLSQTEEVAERIFAI 233 (242)
T ss_dssp CCSHHHHHCHHHHHHHHHH
T ss_pred CceeEcCCHHHHHHHHHHH
Confidence 99999 9999999988765
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=168.80 Aligned_cols=240 Identities=14% Similarity=0.076 Sum_probs=148.5
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEcc---CCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG---FTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~ 103 (308)
.+..+...+...+| ++.+.++.|.+...+.|+||++|| ++++.. .|..+++.|+++ ||.|+++|+||+|.+.
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~-- 120 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHK-- 120 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSC--
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCC--
Confidence 34456667777777 899999988762356899999999 556655 557888999875 9999999999998753
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCCCcCCCC
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGISQKFKP 175 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~ 175 (308)
+....+|+.++++++.... + +..+++++|||+||.+|+.++.++|+ +++++|+++|..........
T Consensus 121 ------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~ 194 (310)
T 2hm7_A 121 ------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPP 194 (310)
T ss_dssp ------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCC
T ss_pred ------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCC
Confidence 3455678888888776542 1 34589999999999999999998875 69999999997654311100
Q ss_pred CchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 176 PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
... ...... ...... ...+....+......... ... . ......+..+ .|+++
T Consensus 195 ----~~~----~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~-~~~-------~--p~~~~~l~~~-~P~li 246 (310)
T 2hm7_A 195 ----ASI----EENAEG--------YLLTGG-MMLWFRDQYLNSLEELTH-PWF-------S--PVLYPDLSGL-PPAYI 246 (310)
T ss_dssp ----HHH----HHTSSS--------SSSCHH-HHHHHHHHHCSSGGGGGC-TTT-------C--GGGCSCCTTC-CCEEE
T ss_pred ----cch----hhcCCC--------CCCCHH-HHHHHHHHhCCCCCccCC-ccC-------C--CCcCccccCC-CCEEE
Confidence 000 000000 000000 000000011000000000 000 0 0001123333 39999
Q ss_pred EeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CC-----chhhHHHhhhc
Q 035721 256 CHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GE-----PEENVELVFGE 307 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~-----~~~~~~~i~~~ 307 (308)
++|++|.++ .....+++.+.. .++++++++++||.+. .. ++++.+.+.++
T Consensus 247 i~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 304 (310)
T 2hm7_A 247 ATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEK 304 (310)
T ss_dssp EEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHH
T ss_pred EEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHH
Confidence 999999987 456666666642 3579999999999765 22 35555555544
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=179.81 Aligned_cols=215 Identities=16% Similarity=0.112 Sum_probs=135.1
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
.+.+..+.|.+. .+.|+||++||++++.. ...++.|+++||.|+++|+||+|.+...... ...+|+.++++
T Consensus 160 ~l~~~l~~P~~~-~~~P~Vv~lhG~~~~~~---~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~-----~~~~d~~~a~~ 230 (446)
T 3hlk_A 160 RVRGTLFLPPEP-GPFPGIVDMFGTGGGLL---EYRASLLAGKGFAVMALAYYNYEDLPKTMET-----LHLEYFEEAMN 230 (446)
T ss_dssp TEEEEEEECSSS-CCBCEEEEECCSSCSCC---CHHHHHHHTTTCEEEEECCSSSTTSCSCCSE-----EEHHHHHHHHH
T ss_pred eEEEEEEeCCCC-CCCCEEEEECCCCcchh---hHHHHHHHhCCCEEEEeccCCCCCCCcchhh-----CCHHHHHHHHH
Confidence 678888887654 56799999999987543 2347889999999999999999987654322 12677778888
Q ss_pred HHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCC
Q 035721 123 SFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS 201 (308)
Q Consensus 123 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
++..... +..+++|+||||||.+|+.+|.++|+ ++++|++++........ .... ....+..........
T Consensus 231 ~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~ 300 (446)
T 3hlk_A 231 YLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGT---LRYK------GETLPPVGVNRNRIK 300 (446)
T ss_dssp HHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSE---EEET------TEEECCCCBCGGGCE
T ss_pred HHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCC---cccc------CccCCccccchhccc
Confidence 8776543 45799999999999999999999997 99999998865322110 0000 000000000000000
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH-HHHHHHhcC--
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV-EELYKRAAS-- 278 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~-- 278 (308)
........ ....+...... ........+.++++|+|+++|++|.+++.+.. +.+.+.+..
T Consensus 301 ~~~~~~~~---------~~~~~~~~~~~--------~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g 363 (446)
T 3hlk_A 301 VTKDGYAD---------IVDVLNSPLEG--------PDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHG 363 (446)
T ss_dssp ECSSSCEE---------CTTCBCCTTSG--------GGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTT
T ss_pred cccchHHH---------HHHHHhchhhc--------cccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcC
Confidence 00000000 00000000000 00111223567889999999999999998444 566666532
Q ss_pred -CCCcEEEecCCcccc
Q 035721 279 -KDKTLSIYPGMWHQL 293 (308)
Q Consensus 279 -~~~~~~~~~~~gH~~ 293 (308)
+++++++++++||.+
T Consensus 364 ~~~~~l~~~pgagH~~ 379 (446)
T 3hlk_A 364 RRKPQIICYPETGHYI 379 (446)
T ss_dssp CCCCEEEEETTBCSCC
T ss_pred CCCcEEEEECCCCCeE
Confidence 338999999999998
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-24 Score=162.92 Aligned_cols=165 Identities=15% Similarity=0.050 Sum_probs=123.4
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---------
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR--------- 127 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~--------- 127 (308)
+.|+|||+||++++.. .|..+++.|+++||.|+++|+||.+ .. .|+..+++.+...
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~----------~~----~~~~~~~~~l~~~~~~~~~~~~ 112 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAG----------TG----REMLACLDYLVRENDTPYGTYS 112 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCT----------TS----HHHHHHHHHHHHHHHSSSSTTT
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCc----------cH----HHHHHHHHHHHhcccccccccc
Confidence 5789999999998876 6688999999999999999999531 11 1222222222211
Q ss_pred cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcc
Q 035721 128 HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 128 ~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (308)
.. +..+++++||||||.+++.++ .++++++++++++..... .
T Consensus 113 ~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------------------------------~----- 155 (258)
T 2fx5_A 113 GKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------------------------------G----- 155 (258)
T ss_dssp TTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST------------------------------T-----
T ss_pred cccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc------------------------------c-----
Confidence 00 334899999999999999988 456899999988742100 0
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHHHHHhcCCCCcEEE
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEELYKRAASKDKTLSI 285 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 285 (308)
.....+.++++|+++++|++|.+++++. .+.+++.. +.++++++
T Consensus 156 ----------------------------------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 200 (258)
T 2fx5_A 156 ----------------------------------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NVPVFWGE 200 (258)
T ss_dssp ----------------------------------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SSCEEEEE
T ss_pred ----------------------------------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CCCeEEEE
Confidence 0012356788999999999999999886 78888774 35689999
Q ss_pred ecCCccccc-CCchhhHHHhhhcC
Q 035721 286 YPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 286 ~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++||+.+ ++++++.+.+.+++
T Consensus 201 ~~g~~H~~~~~~~~~~~~~i~~fl 224 (258)
T 2fx5_A 201 RRYVSHFEPVGSGGAYRGPSTAWF 224 (258)
T ss_dssp ESSCCTTSSTTTCGGGHHHHHHHH
T ss_pred ECCCCCccccchHHHHHHHHHHHH
Confidence 999999999 88999888887653
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=171.34 Aligned_cols=211 Identities=17% Similarity=0.028 Sum_probs=136.2
Q ss_pred CcceEEEEccC--CCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGF--TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+|+|||+||+ +++.. .|..+++.| ..+|+|+++|+||||.+.... .+++++++++.+.++.+... .++
T Consensus 80 ~~~~lv~lhG~~~~~~~~-~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~---~~~~~~~~~~~~~l~~~~~~----~~~ 150 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQ-VYSRLAEEL-DAGRRVSALVPPGFHGGQALP---ATLTVLVRSLADVVQAEVAD----GEF 150 (319)
T ss_dssp SSCEEEEECCSSTTCSGG-GGHHHHHHH-CTTSEEEEEECTTSSTTCCEE---SSHHHHHHHHHHHHHHHHTT----SCE
T ss_pred CCCeEEEECCCCcCCCHH-HHHHHHHHh-CCCceEEEeeCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCC----CCE
Confidence 47899999996 44444 678999999 567999999999999876643 27888888888888876532 399
Q ss_pred EEEEechhhHHHHHHHHhc---CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh-hhCCCcccccCCCCCCCcccccH
Q 035721 135 FLYSESLGGAIALYITLRQ---KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA-WLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
+|+||||||.+|+.+|.++ |++++++|++++....... .........+. ....
T Consensus 151 ~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~------------------- 207 (319)
T 3lcr_A 151 ALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG----GRPEELFRSALNERFV------------------- 207 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC----CHHHHHHHHHHHHHHH-------------------
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc----hhhHHHHHHHHHHHHh-------------------
Confidence 9999999999999999988 8889999999986542210 01111111000 0000
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
......... .....+............ .....+++|+++|+|++ ..+++.....+.+.++ ...++++++ ++
T Consensus 208 --~~~~~~~~~--~~~~~l~~~~~~~~~~~~--~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~-~~~~~~~~~-g~ 278 (319)
T 3lcr_A 208 --EYLRLTGGG--NLSQRITAQVWCLELLRG--WRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLA-AMGQVVEAP-GD 278 (319)
T ss_dssp --HHHHHHCCC--CHHHHHHHHHHHHHHTTT--CCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHH-TCSEEEEES-SC
T ss_pred --hhhcccCCC--chhHHHHHHHHHHHHHhc--CCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCC-CCceEEEeC-CC
Confidence 000000000 000011111111111011 12357899999999998 4566677777777775 357888888 57
Q ss_pred cccc-C--CchhhHHHhhhcC
Q 035721 291 HQLI-G--EPEENVELVFGEM 308 (308)
Q Consensus 291 H~~~-~--~~~~~~~~i~~~i 308 (308)
|+.+ + +++++++.|.+++
T Consensus 279 H~~~~~~~~~~~va~~i~~fL 299 (319)
T 3lcr_A 279 HFTIIEGEHVASTAHIVGDWL 299 (319)
T ss_dssp TTGGGSTTTHHHHHHHHHHHH
T ss_pred cHHhhCcccHHHHHHHHHHHH
Confidence 7777 6 8899988887653
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-23 Score=166.12 Aligned_cols=230 Identities=15% Similarity=0.090 Sum_probs=141.2
Q ss_pred CcEEEEEEecCCCC----------------CCCcceEEEEccCCC---ccc-hHHHHHHHHHH-HcCCeEEEecCCCCcC
Q 035721 41 GLRLFTQWWTPLPP----------------AKTLGVLCVVHGFTG---ESS-WIVQLTAVLFA-KSGFATCAIDHQGHGF 99 (308)
Q Consensus 41 g~~l~~~~~~~~~~----------------~~~~~~vv~~hG~~~---~~~-~~~~~~~~~l~-~~g~~v~~~d~~G~G~ 99 (308)
+..+.++.|.|... ..+.|+||++||.+. +.. ..|..+++.|+ +.||.|+++|+||.+.
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 45677777777543 245789999999654 222 23678889998 6799999999999775
Q ss_pred CCCccccCCCcchHHHHHHHHHHHHHHhc----C-CCC-CEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCcCCCC
Q 035721 100 SDGLVAHIPDLNPVVEDAISFFDSFRARH----A-PDL-PAFLYSESLGGAIALYITLRQKG---AWDGLILNGAMCGIS 170 (308)
Q Consensus 100 s~~~~~~~~~~~~~~~d~~~~l~~~~~~~----~-~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~ 170 (308)
+ ......+|+.++++++.... . +.. +++|+|||+||.+|+.++.++++ +++++|+++|.....
T Consensus 160 ~--------~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~ 231 (351)
T 2zsh_A 160 N--------PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGN 231 (351)
T ss_dssp S--------CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCS
T ss_pred C--------CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCC
Confidence 4 23455788888888887531 1 566 99999999999999999999988 899999999876533
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE 250 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 250 (308)
... ...... .. . .+.......... ..+....... ...... ........+.+++
T Consensus 232 ~~~------~~~~~~----~~-------~-~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-------~~~~~~~~l~~i~ 284 (351)
T 2zsh_A 232 ERT------ESEKSL----DG-------K-YFVTVRDRDWYW-KAFLPEGEDR-EHPACN-------PFSPRGKSLEGVS 284 (351)
T ss_dssp SCC------HHHHHH----TT-------T-SSCCHHHHHHHH-HHHSCTTCCT-TSTTTC-------TTSTTSCCCTTCC
T ss_pred cCC------hhhhhc----CC-------C-cccCHHHHHHHH-HHhCCCCCCC-CCcccC-------CCCCCccchhhCC
Confidence 110 000000 00 0 000000000000 0000000000 000000 0001123455666
Q ss_pred c-ceEEEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCcccccC-----CchhhHHHhhhc
Q 035721 251 V-PMLICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLIG-----EPEENVELVFGE 307 (308)
Q Consensus 251 ~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-----~~~~~~~~i~~~ 307 (308)
+ |+|+++|++|.+++ ....+++.+. +.++++++++++||.++. +++++.+.+.++
T Consensus 285 ~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~F 347 (351)
T 2zsh_A 285 FPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAF 347 (351)
T ss_dssp CCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHH
Confidence 6 99999999999885 4455555553 247899999999998762 456666666654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=191.79 Aligned_cols=230 Identities=15% Similarity=0.129 Sum_probs=158.1
Q ss_pred ccceeEEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCcc---c-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGES---S-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+...+...+| ++.+.++.|.+ ...+.|+||++||++++. . +.+......|+++||.|+++|+||+|.+....
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 45667778888 99999998875 234578999999988763 1 11224556677789999999999999853211
Q ss_pred c--cCCC-cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCcCCCCcCCCCC
Q 035721 105 A--HIPD-LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAMCGISQKFKPP 176 (308)
Q Consensus 105 ~--~~~~-~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~ 176 (308)
. .... -....+|+.++++++..... +..+++|+|||+||.+++.++.++ |++++++|++++.......
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~---- 622 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY---- 622 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS----
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHh----
Confidence 1 0001 12456888888888765421 346899999999999999999999 9999999999986543211
Q ss_pred chhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC-cceEE
Q 035721 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE-VPMLI 255 (308)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~ 255 (308)
..... ...... +.. . ...+.. ......+.+++ +|+|+
T Consensus 623 --~~~~~---~~~~~~----~~~---~----------------~~~~~~--------------~~~~~~~~~~~~~P~li 660 (723)
T 1xfd_A 623 --ASAFS---ERYLGL----HGL---D----------------NRAYEM--------------TKVAHRVSALEEQQFLI 660 (723)
T ss_dssp --BHHHH---HHHHCC----CSS---C----------------CSSTTT--------------TCTHHHHTSCCSCEEEE
T ss_pred --hhhcc---HhhcCC----ccC---C----------------hhHHHh--------------cChhhHHhhcCCCCEEE
Confidence 00000 000000 000 0 000000 01123456787 79999
Q ss_pred EeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCcccc-c-CCchhhHHHhhhc
Q 035721 256 CHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQL-I-GEPEENVELVFGE 307 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~-~-~~~~~~~~~i~~~ 307 (308)
++|++|..+|++.++.+++.+. +.++++++++++||.+ . +.++++.+.+.++
T Consensus 661 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 716 (723)
T 1xfd_A 661 IHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINF 716 (723)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHH
Confidence 9999999999999999988874 2467999999999998 4 7788888877765
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-23 Score=164.61 Aligned_cols=133 Identities=19% Similarity=0.088 Sum_probs=100.3
Q ss_pred cccccceeEEcCCCc-EEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCC
Q 035721 28 SVSHSSEYITNSRGL-RLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~ 102 (308)
++..++..+...+|. ++.++++.|.....+.|+||++||++ ++.. .|..++..|++ .||.|+++|+||+|.+..
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 445566777777886 78898888865435679999999987 5555 45678888877 499999999999998753
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCC
Q 035721 103 LVAHIPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGI 169 (308)
Q Consensus 103 ~~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 169 (308)
+ ...+|+.++++++... .+ +..+++|+|||+||.+|+.++.++++ +++++|+++|....
T Consensus 127 ~--------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 127 P--------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp T--------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred C--------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 2 3355666666665441 11 34589999999999999999988765 49999999997654
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-22 Score=161.08 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=144.5
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCcc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~ 104 (308)
+..++..+...+| ++.+++|.|... .+.|+||++||.+ ++.. .|..+++.|++. ||.|+++|+||+|.+..
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~-- 137 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKTQ-GPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKF-- 137 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSSC-SCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCT--
T ss_pred cEEEEEEecCCCC-eEEEEEEecCCC-CCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCC--
Confidence 3455666766666 899988888653 5679999999954 5555 557888889864 99999999999998643
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCc---cEEEEeCCcCCCCcCCCCCch
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAW---DGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v---~~~vl~~~~~~~~~~~~~~~~ 178 (308)
....+|+.++++++..... +..+++|+|||+||.+|+.++.++|+++ +++|+++|........
T Consensus 138 ------p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~----- 206 (323)
T 3ain_A 138 ------PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLIT----- 206 (323)
T ss_dssp ------THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCC-----
T ss_pred ------cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCC-----
Confidence 3345677777776654321 3468999999999999999999988776 8999999875533110
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
.... ..... ....... ..+....+......... ... ......+..+. |+++++|
T Consensus 207 -~~~~----~~~~~--------~~l~~~~-~~~~~~~~~~~~~~~~~-~~~----------sp~~~~l~~l~-P~lii~G 260 (323)
T 3ain_A 207 -KSLY----DNGEG--------FFLTREH-IDWFGQQYLRSFADLLD-FRF----------SPILADLNDLP-PALIITA 260 (323)
T ss_dssp -HHHH----HHSSS--------SSSCHHH-HHHHHHHHCSSGGGGGC-TTT----------CGGGSCCTTCC-CEEEEEE
T ss_pred -ccHH----HhccC--------CCCCHHH-HHHHHHHhCCCCcccCC-ccc----------CcccCcccCCC-HHHEEEC
Confidence 0000 00000 0000000 00000000000000000 000 01111233343 9999999
Q ss_pred CCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc-CCc-----hhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI-GEP-----EENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~-----~~~~~~i~~~ 307 (308)
++|.++ .....+++.+. +.+++++++++++|.+. ..+ +++.+.+.++
T Consensus 261 ~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 315 (323)
T 3ain_A 261 EHDPLR--DQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYV 315 (323)
T ss_dssp TTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHH
T ss_pred CCCccH--HHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHH
Confidence 999987 35555666553 24689999999999988 544 4555555543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=171.65 Aligned_cols=211 Identities=11% Similarity=0.049 Sum_probs=141.9
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
+..+.+.+|.|.....+.|+||++||.+ ++.. .+..+++.|+++||.|+++|+||+|.+ +.....+|+
T Consensus 65 ~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~--------~~~~~~~d~ 135 (303)
T 4e15_A 65 EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQV--------TLEQLMTQF 135 (303)
T ss_dssp STTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTS--------CHHHHHHHH
T ss_pred CCCcEEEEEecCCCCCCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCC--------ChhHHHHHH
Confidence 3344556666754445689999999954 3333 446788899999999999999999864 345567788
Q ss_pred HHHHHHHHH---hcCCCCCEEEEEechhhHHHHHHHHhcC-------CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 118 ISFFDSFRA---RHAPDLPAFLYSESLGGAIALYITLRQK-------GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 118 ~~~l~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-------~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
.++++++.. .. +..+++|+|||+||.+++.++.+.+ ++++++|++++............ ....
T Consensus 136 ~~~~~~l~~~~~~~-~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~------~~~~ 208 (303)
T 4e15_A 136 THFLNWIFDYTEMT-KVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLES------VNPK 208 (303)
T ss_dssp HHHHHHHHHHHHHT-TCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTT------TSGG
T ss_pred HHHHHHHHHHhhhc-CCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccc------cchh
Confidence 888877755 22 5679999999999999999998654 37999999998755321100000 0000
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC----CcceEEEeeCCCcc
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV----EVPMLICHGGDDVV 263 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~P~l~i~g~~D~~ 263 (308)
..+ .... ...... ......+..+ .+|+++++|++|.+
T Consensus 209 ~~~----------~~~~----------------~~~~~~-------------sp~~~~~~~~~~~~~~P~lii~G~~D~~ 249 (303)
T 4e15_A 209 NIL----------GLNE----------------RNIESV-------------SPMLWEYTDVTVWNSTKIYVVAAEHDST 249 (303)
T ss_dssp GTT----------CCCT----------------TTTTTT-------------CGGGCCCCCGGGGTTSEEEEEEEEESCH
T ss_pred hhh----------cCCH----------------HHHHHc-------------CchhhcccccccCCCCCEEEEEeCCCCC
Confidence 000 0000 000000 0111223333 89999999999999
Q ss_pred cChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 264 CDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
++.+.++.+++.+.. .++++++++++||+.+ +........+.+
T Consensus 250 v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 295 (303)
T 4e15_A 250 TFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSR 295 (303)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHH
T ss_pred CchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHH
Confidence 999999999988852 3679999999999888 776665555443
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=159.42 Aligned_cols=183 Identities=13% Similarity=0.172 Sum_probs=130.1
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc-----CCeEEEecCCCCcCCC-----------------CccccCCCcchH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS-----GFATCAIDHQGHGFSD-----------------GLVAHIPDLNPV 113 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-----g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~ 113 (308)
+++|+||++||++++.. .|..+.+.|..+ |+.|+++|.++++.+. .......++++.
T Consensus 21 ~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVM 99 (239)
T ss_dssp CCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHH
T ss_pred CCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHH
Confidence 45899999999998877 557788888765 6899998887542111 011111245556
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++++..+++.......+..+++|+|||+||.+|+.++.++|++++++|++++.......
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--------------------- 158 (239)
T 3u0v_A 100 CQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA--------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH---------------------
T ss_pred HHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH---------------------
Confidence 67777777765432114569999999999999999999999999999999986432100
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-eEEEeeCCCcccChHHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-MLICHGGDDVVCDPACVEEL 272 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~ 272 (308)
.. ... . .....+| +++++|++|.+++.+.++.+
T Consensus 159 -----------------~~---------------------------~~~-~-~~~~~~pp~li~~G~~D~~v~~~~~~~~ 192 (239)
T 3u0v_A 159 -----------------VY---------------------------QAL-Q-KSNGVLPELFQCHGTADELVLHSWAEET 192 (239)
T ss_dssp -----------------HH---------------------------HHH-H-HCCSCCCCEEEEEETTCSSSCHHHHHHH
T ss_pred -----------------HH---------------------------HHH-H-hhccCCCCEEEEeeCCCCccCHHHHHHH
Confidence 00 000 0 1234567 99999999999999999998
Q ss_pred HHHhcC--CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 273 YKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 273 ~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
.+.+.. .++++++++++||.+. +..+.+.+.+.+
T Consensus 193 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 229 (239)
T 3u0v_A 193 NSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILT 229 (239)
T ss_dssp HHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHH
Confidence 888852 3689999999999998 655555554443
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=183.46 Aligned_cols=240 Identities=9% Similarity=0.028 Sum_probs=159.5
Q ss_pred cccccceeEEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+..+...+...||.++.+.++.|.+ ...+.|+||++||.++... ..|......|.++||.|+++|+||+|.+....
T Consensus 414 ~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 414 QYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred HCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 44566677888899999999988765 2246799999999665443 12334455677889999999999998775421
Q ss_pred ---ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 ---AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 ---~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
..........+|+.++++++..... +..+++++|||+||.+++.++.++|++++++|+.+|...........
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~---- 569 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFG---- 569 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccC----
Confidence 1111234456899999998876533 45689999999999999999999999999999999875532100000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC--cceEEEee
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE--VPMLICHG 258 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i~g 258 (308)
.. ..+. ..+ ..+ . . ......+.. ......+.+++ .|+|+++|
T Consensus 570 ----------------------~~----~~~~-~~~-g~~----~--~-~~~~~~~~~-~sp~~~~~~~~~~~P~Li~~G 613 (695)
T 2bkl_A 570 ----------------------SG----RTWI-PEY-GTA----E--K-PEDFKTLHA-YSPYHHVRPDVRYPALLMMAA 613 (695)
T ss_dssp ----------------------TG----GGGH-HHH-CCT----T--S-HHHHHHHHH-HCGGGCCCSSCCCCEEEEEEE
T ss_pred ----------------------CC----cchH-HHh-CCC----C--C-HHHHHHHHh-cChHhhhhhcCCCCCEEEEee
Confidence 00 0000 000 000 0 0 000111111 12223455554 69999999
Q ss_pred CCCcccChHHHHHHHHHhcC-----CCCcEEEecCCccccc---CCchhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI---GEPEENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~---~~~~~~~~~i~~~ 307 (308)
++|..+++..++++++.++. ..+++++++++||.+. +++.+....++++
T Consensus 614 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 670 (695)
T 2bkl_A 614 DHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSF 670 (695)
T ss_dssp TTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999998853 3478999999999984 3344455555443
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=184.45 Aligned_cols=231 Identities=16% Similarity=0.109 Sum_probs=157.0
Q ss_pred cceeEEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccc--hHHH-HHHHHHH-HcCCeEEEecCCCCcCCCCccc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS--WIVQ-LTAVLFA-KSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~--~~~~-~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
+...+...+ .++.+.++.|.+ ...+.|+||++||++++.. ..|. .+...|. ++||.|+++|+||+|.+.....
T Consensus 469 ~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 469 EIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 445566666 899999998875 2245789999999987642 1111 3445554 6899999999999999865321
Q ss_pred c--CCCc-chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 106 H--IPDL-NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 106 ~--~~~~-~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
. ...+ ....+|+.++++++..... +..+++++|||+||.+++.++.++|++++++|+++|....... ...
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~------~~~ 621 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY------ASV 621 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS------BHH
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh------ccc
Confidence 1 0111 2457888888888876422 4568999999999999999999999999999999987543210 000
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc-ceEEEeeCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV-PMLICHGGD 260 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~ 260 (308)
.. .. +...+... ... ..+.. .+....+.++++ |+|+++|++
T Consensus 622 ~~---~~---------------------------~~g~~~~~---~~~----~~~~~-~~~~~~~~~~~~~P~li~~G~~ 663 (719)
T 1z68_A 622 YT---ER---------------------------FMGLPTKD---DNL----EHYKN-STVMARAEYFRNVDYLLIHGTA 663 (719)
T ss_dssp HH---HH---------------------------HHCCSSTT---TTH----HHHHH-TCSGGGGGGGTTSEEEEEEETT
T ss_pred cc---hh---------------------------hcCCcccc---cch----hhhhh-CCHhHHHhcCCCCcEEEEEeCC
Confidence 00 00 00000000 000 00000 122244567777 899999999
Q ss_pred CcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 261 DVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
|..++++.++.+++.++. .++++++++++||.+. ++++++.+.+.++
T Consensus 664 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 713 (719)
T 1z68_A 664 DDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHF 713 (719)
T ss_dssp CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHH
Confidence 999999999999988753 3468999999999997 6678888777765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=184.79 Aligned_cols=226 Identities=15% Similarity=0.072 Sum_probs=153.6
Q ss_pred cCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccc---hHHHHHHHHHH-HcCCeEEEecCCCCcCCCCcccc---CC
Q 035721 38 NSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS---WIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLVAH---IP 108 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~---~~ 108 (308)
..+|.++.+.++.|.+ ...+.|+||++||.+++.. .+...+...|+ ++||.|+++|+||+|.+...... ..
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 6799999999999876 3345789999999877631 11112334555 48999999999999977543211 01
Q ss_pred CcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 109 DLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
......+|+.++++++..... +..+++|+|||+||.+|+.++.++|++++++|+++|.......
T Consensus 560 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~--------------- 624 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY--------------- 624 (740)
T ss_dssp TTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS---------------
T ss_pred hCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh---------------
Confidence 112347888889988875422 4468999999999999999999999999999999986542210
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc-ceEEEeeCCCcccCh
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV-PMLICHGGDDVVCDP 266 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~ 266 (308)
+......+...+.... .. ..+.. ......+.++++ |+|+++|+.|..+++
T Consensus 625 ---------------------~~~~~~~~~~~p~~~~---~~----~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~ 675 (740)
T 4a5s_A 625 ---------------------DSVYTERYMGLPTPED---NL----DHYRN-STVMSRAENFKQVEYLLIHGTADDNVHF 675 (740)
T ss_dssp ---------------------BHHHHHHHHCCSSTTT---TH----HHHHH-SCSGGGGGGGGGSEEEEEEETTCSSSCT
T ss_pred ---------------------hhHHHHHHcCCCCccc---cH----HHHHh-CCHHHHHhcCCCCcEEEEEcCCCCccCH
Confidence 0000000000000000 00 00000 122234566776 999999999999999
Q ss_pred HHHHHHHHHhcC--CCCcEEEecCCcccc-c-CCchhhHHHhhhc
Q 035721 267 ACVEELYKRAAS--KDKTLSIYPGMWHQL-I-GEPEENVELVFGE 307 (308)
Q Consensus 267 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~-~-~~~~~~~~~i~~~ 307 (308)
+.+..+++.+.. .++++++++++||.+ . +.++.+.+.+.++
T Consensus 676 ~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 720 (740)
T 4a5s_A 676 QQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 720 (740)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHH
Confidence 999999988853 457899999999999 4 6677777777655
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=169.20 Aligned_cols=126 Identities=14% Similarity=0.053 Sum_probs=93.6
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHH-HcCCeEEEecCCCCcCCCCcccc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.++..+...+| .+.+++| +. . .+.|+||++||++ ++.. .+..++..|+ ..||.|+++|+||+|.+..+.
T Consensus 56 ~~~~~i~~~~g-~i~~~~y-~~-~-~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~-- 128 (311)
T 1jji_A 56 VEDRTIKGRNG-DIRVRVY-QQ-K-PDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPA-- 128 (311)
T ss_dssp EEEEEEEETTE-EEEEEEE-ES-S-SSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTH--
T ss_pred EEEEEecCCCC-cEEEEEE-cC-C-CCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCC--
Confidence 55666777777 7888877 33 2 4579999999988 5655 5578888888 569999999999999986532
Q ss_pred CCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhcCCC----ccEEEEeCCcCCC
Q 035721 107 IPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQKGA----WDGLILNGAMCGI 169 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~ 169 (308)
..+|+.++++++... .+ +..+++|+|||+||.+|+.++.+.+++ ++++|+++|....
T Consensus 129 ------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 129 ------AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp ------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred ------cHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 234444444444321 11 344899999999999999999988765 9999999997654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=181.80 Aligned_cols=240 Identities=10% Similarity=0.013 Sum_probs=157.6
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc-hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS-WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~ 103 (308)
.+..+...+...||.+|.+.++.|.+. ..+.|+||++||.++... ..|......|.+ +||.|+++|+||+|.+...
T Consensus 434 ~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 434 DYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred ccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 445567778888999999999988652 245799999999876543 223333446666 8999999999999976432
Q ss_pred ccc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh
Q 035721 104 VAH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179 (308)
Q Consensus 104 ~~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 179 (308)
... ........+|+.++++++..... +..+++++|||+||.+++.++.++|++++++|+.+|...........
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~--- 590 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT--- 590 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST---
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccC---
Confidence 111 01223346788888888876532 55699999999999999999999999999999999865432110000
Q ss_pred hhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC-----CCCc-ce
Q 035721 180 EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE-----EVEV-PM 253 (308)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~-P~ 253 (308)
... .+. ..+ ..+ ... .....+.. ......+. ++++ |+
T Consensus 591 -----------------------~~~----~~~-~~~-g~~------~~~-~~~~~~~~-~sp~~~~~~~~~~~~~~pP~ 633 (710)
T 2xdw_A 591 -----------------------IGH----AWT-TDY-GCS------DSK-QHFEWLIK-YSPLHNVKLPEADDIQYPSM 633 (710)
T ss_dssp -----------------------TGG----GGH-HHH-CCT------TSH-HHHHHHHH-HCGGGCCCCCSSTTCCCCEE
T ss_pred -----------------------CCh----hHH-HhC-CCC------CCH-HHHHHHHH-hCcHhhhcccccccCCCCcE
Confidence 000 000 000 000 000 00111111 12223445 6777 99
Q ss_pred EEEeeCCCcccChHHHHHHHHHhc---------CCCCcEEEecCCccccc-CC--chhhHHHhhhc
Q 035721 254 LICHGGDDVVCDPACVEELYKRAA---------SKDKTLSIYPGMWHQLI-GE--PEENVELVFGE 307 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~-~~--~~~~~~~i~~~ 307 (308)
|+++|++|..+++..+.++++.++ +..+++++++++||.+. .. +.++.+.+.++
T Consensus 634 Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 699 (710)
T 2xdw_A 634 LLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAF 699 (710)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999998888774 23468999999999987 32 23444555443
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=176.70 Aligned_cols=228 Identities=8% Similarity=-0.052 Sum_probs=156.1
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc-hHHH-HHHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS-WIVQ-LTAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
..+..+...+.+.||.+|.+.++.|.+. ..+.|+||++||.++... ..+. ...+.|.++||.|+.+|+||+|.+..
T Consensus 445 ~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~ 524 (711)
T 4hvt_A 445 ENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGP 524 (711)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCH
T ss_pred ccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcch
Confidence 3455667788899999999999988753 356899999999765432 1222 23357888999999999999987754
Q ss_pred ccc---cCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 103 LVA---HIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 103 ~~~---~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
... .........+|+.++++++..... +..++.++|+|+||.+++.++.++|++++++|+.+|...........
T Consensus 525 ~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~-- 602 (711)
T 4hvt_A 525 EWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFG-- 602 (711)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST--
T ss_pred hHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccc--
Confidence 211 111223456788899998877643 56799999999999999999999999999999999876532110000
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc--ceEEE
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV--PMLIC 256 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--P~l~i 256 (308)
. ...+. ..+ ..+ ........+.. .+....+.++++ |+|++
T Consensus 603 ------------------------~----~~~~~-~~~-G~p-------~~~~~~~~l~~-~SP~~~v~~i~~~pPvLii 644 (711)
T 4hvt_A 603 ------------------------A----GHSWV-TEY-GDP-------EIPNDLLHIKK-YAPLENLSLTQKYPTVLIT 644 (711)
T ss_dssp ------------------------T----GGGGH-HHH-CCT-------TSHHHHHHHHH-HCGGGSCCTTSCCCEEEEE
T ss_pred ------------------------c----chHHH-HHh-CCC-------cCHHHHHHHHH-cCHHHHHhhcCCCCCEEEE
Confidence 0 00000 000 000 00001111111 123345667776 99999
Q ss_pred eeCCCcccChHHHHHHHHHh-cC--CCCcEEEecCCccccc
Q 035721 257 HGGDDVVCDPACVEELYKRA-AS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~gH~~~ 294 (308)
+|++|..+|+..+.++++.+ .. ..+++++++++||.+.
T Consensus 645 ~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~ 685 (711)
T 4hvt_A 645 DSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSG 685 (711)
T ss_dssp EETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSC
T ss_pred ecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCc
Confidence 99999999999999999998 53 3579999999999976
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-24 Score=186.23 Aligned_cols=242 Identities=13% Similarity=0.000 Sum_probs=152.6
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
...+..+...+...||.+|.+.++.|.+...+.|+||++||.++... ..|......|.++||.|+++|+||+|.+....
T Consensus 456 ~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 535 (741)
T 1yr2_A 456 PADFRVEQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAW 535 (741)
T ss_dssp GGGEEEEEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHH
T ss_pred hhHCEEEEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHH
Confidence 33455667788888999999999988752246899999999876543 22344556788899999999999999874321
Q ss_pred cc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 AH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 ~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.. ...-....+|+.++++++..... +..+++++|+|+||.+++.++.++|++++++|+.+|...........
T Consensus 536 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~---- 611 (741)
T 1yr2_A 536 HDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFT---- 611 (741)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGST----
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCC----
Confidence 11 00112346888888888876533 56799999999999999999999999999999999865432100000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCC-CCc-ceEEEee
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE-VEV-PMLICHG 258 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~-P~l~i~g 258 (308)
... .+. ..+ ..+ ... .....+.. ......+.. +++ |+|+++|
T Consensus 612 ----------------------~~~----~~~-~~~-g~~------~~~-~~~~~~~~-~sp~~~~~~~~~~~P~Li~~G 655 (741)
T 1yr2_A 612 ----------------------AGR----YWV-DDY-GYP------EKE-ADWRVLRR-YSPYHNVRSGVDYPAILVTTA 655 (741)
T ss_dssp ----------------------TGG----GGH-HHH-CCT------TSH-HHHHHHHT-TCGGGCCCTTSCCCEEEEEEC
T ss_pred ----------------------CCc----hhH-HHc-CCC------CCH-HHHHHHHH-cCchhhhhccCCCCCEEEEee
Confidence 000 000 000 000 000 00000000 111234554 674 9999999
Q ss_pred CCCcccChHHHHHHHHHhcC-----CCCcEEEecCCccccc-CCc--hhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI-GEP--EENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~-~~~--~~~~~~i~~~ 307 (308)
++|..+++..+.++++.++. ..+++++++++||.+. ... .++.+.+.++
T Consensus 656 ~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~f 712 (741)
T 1yr2_A 656 DTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAF 712 (741)
T ss_dssp SCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHH
T ss_pred CCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999888753 2378999999999977 332 2445555443
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-22 Score=159.87 Aligned_cols=232 Identities=15% Similarity=0.163 Sum_probs=147.4
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCcc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~ 104 (308)
+..++..+...+| .|.++++.|... +.|+||++||.+ ++.. .|..++..|+. .||.|+++|+|+.+..
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~--~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~---- 132 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT--SQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQA---- 132 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS--CSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTS----
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC--CCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCC----
Confidence 3345667777788 899999988754 359999999988 6655 45678888887 7999999999976543
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCCC------ccEEEEeCCcCCCCcCCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKGA------WDGLILNGAMCGISQKFK 174 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~------v~~~vl~~~~~~~~~~~~ 174 (308)
.+....+|+.++++++.... + +..+++|+|+|+||.+|+.++.+.+++ +++++++++........
T Consensus 133 ----~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~- 207 (326)
T 3ga7_A 133 ----RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSV- 207 (326)
T ss_dssp ----CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCH-
T ss_pred ----CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCCh-
Confidence 34556788888888887642 2 557999999999999999999987754 89999998865432110
Q ss_pred CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHH---HHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc
Q 035721 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR---KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV 251 (308)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 251 (308)
.. . .... .. ......... ..+......... +.. ......+.+...
T Consensus 208 ----~~---~----~~~~--------~~--~~l~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~ 255 (326)
T 3ga7_A 208 ----SR---R----LFGG--------AW--DGLTREDLDMYEKAYLRNDEDRES-PWY----------CLFNNDLTRDVP 255 (326)
T ss_dssp ----HH---H----HCCC--------TT--TTCCHHHHHHHHHHHCSSGGGGGC-TTT----------SGGGSCCSSCCC
T ss_pred ----hH---h----hhcC--------CC--CCCCHHHHHHHHHHhCCCCCccCC-ccc----------CCCcchhhcCCC
Confidence 00 0 0000 00 000000000 000000000000 000 011123344567
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CC-----chhhHHHhhhc
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GE-----PEENVELVFGE 307 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~-----~~~~~~~i~~~ 307 (308)
|+++++|+.|.++ .....+++.+.. ..+++++++|++|.+. .. .+++.+.+.++
T Consensus 256 P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~f 317 (326)
T 3ga7_A 256 PCFIASAEFDPLI--DDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARF 317 (326)
T ss_dssp CEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHH
T ss_pred CEEEEecCcCcCH--HHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHH
Confidence 9999999999998 456666666642 3579999999999986 32 24555555443
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-23 Score=159.35 Aligned_cols=211 Identities=13% Similarity=0.026 Sum_probs=133.4
Q ss_pred eEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHH---HHHHHHHcCCeEEEecCCCCcCCCCccccCC--
Q 035721 35 YITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQL---TAVLFAKSGFATCAIDHQGHGFSDGLVAHIP-- 108 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-- 108 (308)
......|.++.+.++.|.+. ..+.|+||++||++++.. .|.. +.+.+.+.||.|+++|+||+|.|.......+
T Consensus 20 ~~s~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~ 98 (278)
T 3e4d_A 20 HQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQM 98 (278)
T ss_dssp EEETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTS
T ss_pred EeccccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCcccccccccccc
Confidence 34566788999999988752 356899999999988876 3344 5566666699999999999998865331100
Q ss_pred -------------------C-cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 109 -------------------D-LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 109 -------------------~-~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
. .+..++++...++. ... +..+++++|||+||.+|+.++.++|++++++++++|..
T Consensus 99 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 175 (278)
T 3e4d_A 99 GKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQ---HFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIV 175 (278)
T ss_dssp BTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHH---HSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCS
T ss_pred cCCccccccCCcCcccchhhHHHHHHHHHHHHHHh---hcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcc
Confidence 0 11122344444443 321 33599999999999999999999999999999999976
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE 247 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (308)
...... +....... .+... ... +..... ......+
T Consensus 176 ~~~~~~---~~~~~~~~----~~~~~----------~~~----------------~~~~~~-----------~~~~~~~- 210 (278)
T 3e4d_A 176 APSSAD---WSEPALEK----YLGAD----------RAA----------------WRRYDA-----------CSLVEDG- 210 (278)
T ss_dssp CGGGCT---TTHHHHHH----HHCSC----------GGG----------------GGGGCH-----------HHHHHTT-
T ss_pred cccCCc---cchhhHHH----hcCCc----------HHH----------------HHhcCh-----------hhHhhcC-
Confidence 533211 10100000 00000 000 000000 0111111
Q ss_pred CCCcceEEEeeCCCcccChHH-HHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 248 EVEVPMLICHGGDDVVCDPAC-VEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 248 ~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
...+|+++++|++|.+++... .+.+.+.+.. .++++.+++|++|...
T Consensus 211 ~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 260 (278)
T 3e4d_A 211 ARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYY 260 (278)
T ss_dssp CCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHH
T ss_pred CCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHH
Confidence 145699999999999997532 5667777643 3468999999999765
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=154.18 Aligned_cols=236 Identities=12% Similarity=0.066 Sum_probs=140.6
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
.++..+|.++.+ |.|.. .+.|+||++||++ ++...++..+.+.+.+.||+|+++|+|+.+. ..+.
T Consensus 8 ~~~~~~~~~~~~--y~p~~--~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe--------~~~p 75 (274)
T 2qru_A 8 NQTLANGATVTI--YPTTT--EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPN--------TKID 75 (274)
T ss_dssp EEECTTSCEEEE--ECCSS--SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTT--------SCHH
T ss_pred cccccCCeeEEE--EcCCC--CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCC--------CCCc
Confidence 455567777655 45543 3578999999987 4444333567777888899999999997542 2567
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH---hcCCCccEEEEeCCcCCCCcCCCCCc-hhhhh-HHHh
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL---RQKGAWDGLILNGAMCGISQKFKPPW-PLEHL-LFTV 186 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~~~~~~~~~~-~~~~~-~~~~ 186 (308)
..++|+.++++++.......++++|+|+|+||.+|+.++. ..+.++++++++++............ ..... ....
T Consensus 76 ~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T 2qru_A 76 HILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEI 155 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGG
T ss_pred HHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHHH
Confidence 7899999999998865212569999999999999999987 35778999999887554111000000 00000 0000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHH-H-----HHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeC
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWK-R-----KLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGG 259 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~ 259 (308)
...... ...........+..... . ..+........... ... ...+.++ .|+++++|+
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~l-pP~li~~G~ 219 (274)
T 2qru_A 156 AAIDQT---KPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSA------------YALSDETLKTF-PPCFSTASS 219 (274)
T ss_dssp TTSCCS---SCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGG------------GCCCHHHHHTS-CCEEEEEET
T ss_pred hhhccc---CCCCCCccccchhhhhhhhhhcchhhccCccccccccc------------CCCChhhhcCC-CCEEEEEec
Confidence 000000 00000000000000000 0 00000000000000 000 0123455 799999999
Q ss_pred CCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhh
Q 035721 260 DDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEEN 300 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~ 300 (308)
.|..++...++.+.+.+ ++++++++++++|.+. +.+...
T Consensus 220 ~D~~~~~~~~~~l~~~~--~~~~l~~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 220 SDEEVPFRYSKKIGRTI--PESTFKAVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp TCSSSCTHHHHHHHHHS--TTCEEEEECSCCSCGGGGTTSHH
T ss_pred CCCCcCHHHHHHHHHhC--CCcEEEEcCCCCcCCccCcCCHH
Confidence 99999988899999888 5789999999999988 655544
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-23 Score=178.64 Aligned_cols=228 Identities=11% Similarity=0.008 Sum_probs=148.4
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+..+...+...||.+|.+.++.|.+. ..+.|+||++||..+... ..|......|.++||.|+++|+||.|......
T Consensus 422 ~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 501 (693)
T 3iuj_A 422 DYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAW 501 (693)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred hCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHH
Confidence 445567778888999999999988642 246799999999765432 23345567788899999999999998765321
Q ss_pred cc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 AH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 ~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.. ........+|+.++++++..... +..+++++|+|+||+++..++.++|++++++|+.+|..........
T Consensus 502 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~----- 576 (693)
T 3iuj_A 502 HLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTF----- 576 (693)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGS-----
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccC-----
Confidence 11 01222346788888888877633 5679999999999999999999999999999999987653211000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCC-CCcc-eEEEee
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE-VEVP-MLICHG 258 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P-~l~i~g 258 (308)
. . ...+. ..+ ..+ ... ......+.. ......+.+ +++| +|+++|
T Consensus 577 ----------~---~------------~~~~~-~~~-g~p----~~~--~~~~~~~~~-~sp~~~~~~~~~~Pp~Li~~G 622 (693)
T 3iuj_A 577 ----------T---A------------GTGWA-YDY-GTS----ADS--EAMFDYLKG-YSPLHNVRPGVSYPSTMVTTA 622 (693)
T ss_dssp ----------G---G------------GGGCH-HHH-CCT----TSC--HHHHHHHHH-HCHHHHCCTTCCCCEEEEEEE
T ss_pred ----------C---C------------chhHH-HHc-CCc----cCH--HHHHHHHHh-cCHHHhhcccCCCCceeEEec
Confidence 0 0 00000 000 000 000 000111111 122344566 7887 999999
Q ss_pred CCCcccChHHHHHHHHHhcC-----CCCcEEEecCCccccc
Q 035721 259 GDDVVCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~ 294 (308)
++|..+++..+.++++.+.. ..+++++++++||.+.
T Consensus 623 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 663 (693)
T 3iuj_A 623 DHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAG 663 (693)
T ss_dssp SSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------
T ss_pred CCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCc
Confidence 99999999999998888753 2468999999999876
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-22 Score=157.79 Aligned_cols=126 Identities=11% Similarity=0.048 Sum_probs=96.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC------------CC--cCCCCc
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ------------GH--GFSDGL 103 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~------------G~--G~s~~~ 103 (308)
..+|.++.+..+.|.....+.|+||++||++++...++..+.+.+.+.||.|+++|+| |+ |.|...
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 5678899998888876335689999999999887644467888898899999999999 55 655443
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCC-CccEEEEeCCc
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKG-AWDGLILNGAM 166 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 166 (308)
.. ......+|+.++++.+..... +..+++|+|||+||.+++.++.++|+ +++++|+.++.
T Consensus 114 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 114 RH---VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CC---GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred Cc---ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 11 111223567777777766432 56799999999999999999999995 79999987753
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=165.10 Aligned_cols=204 Identities=15% Similarity=0.054 Sum_probs=130.5
Q ss_pred CCcceEEEEccCCCcc--chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH-HHHHHhcCCCC
Q 035721 56 KTLGVLCVVHGFTGES--SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF-DSFRARHAPDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l-~~~~~~~~~~~ 132 (308)
..+++|||+||++++. . .|..+.+.|.. +|+|+++|+||||.|.... ++++++++++.+.+ +.+ +..
T Consensus 65 ~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~---~~~~~~a~~~~~~l~~~~-----~~~ 134 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPH-EFTRLAGALRG-IAPVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQ-----GDK 134 (300)
T ss_dssp SCSSEEEECCCSSTTCSTT-TTHHHHHHTSS-SCCBCCCCCTTSSTTCCBC---SSHHHHHHHHHHHHHHHC-----SSC
T ss_pred CCCCeEEEECCCcccCcHH-HHHHHHHhcCC-CceEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc-----CCC
Confidence 3478999999999876 5 56788888865 5999999999999987542 47888888877543 333 334
Q ss_pred CEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCCCCCchhhhhHHH-hhhhCCCcccccCCCCCCCcccc
Q 035721 133 PAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKFKPPWPLEHLLFT-VAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+++++|||+||.+|+.++.++| ++++++|++++...... .....+... ...+... . . ....
T Consensus 135 ~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~-----~~~~~~~~~~~~~~~~~------~-~---~~~~ 199 (300)
T 1kez_A 135 PFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ-----DAMNAWLEELTATLFDR------E-T---VRMD 199 (300)
T ss_dssp CEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC-----HHHHHHHHHHHGGGCCC------C-S---SCCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch-----hHHHHHHHHHHHHHHhC------c-C---Cccc
Confidence 9999999999999999999988 48999999998653221 011111110 0000000 0 0 0000
Q ss_pred cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 209 EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
+ ........+..... ......+++|+++++|+ |..+++.. ..+.+.++ .+++++++++
T Consensus 200 ~-----------------~~~~~~~~~~~~~~--~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~-~~~~~~~i~g 257 (300)
T 1kez_A 200 D-----------------TRLTALGAYDRLTG--QWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWP-FEHDTVAVPG 257 (300)
T ss_dssp H-----------------HHHHHHHHHHHHTT--TCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCS-SCCEEEEESS
T ss_pred h-----------------HHHHHHHHHHHHHh--cCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcC-CCCeEEEecC
Confidence 0 00000111111100 11246789999999995 55565544 33333332 2579999998
Q ss_pred Cccccc--CCchhhHHHhhhc
Q 035721 289 MWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 289 ~gH~~~--~~~~~~~~~i~~~ 307 (308)
||+.+ ++|+++++.|.++
T Consensus 258 -gH~~~~~e~~~~~~~~i~~f 277 (300)
T 1kez_A 258 -DHFTMVQEHADAIARHIDAW 277 (300)
T ss_dssp -CTTTSSSSCSHHHHHHHHHH
T ss_pred -CChhhccccHHHHHHHHHHH
Confidence 99987 7899998888765
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-22 Score=151.87 Aligned_cols=192 Identities=14% Similarity=0.040 Sum_probs=135.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcC---CeEEEecCCCCcCCC--Ccc-----c-----------cCC-CcchHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSG---FATCAIDHQGHGFSD--GLV-----A-----------HIP-DLNPVVE 115 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g---~~v~~~d~~G~G~s~--~~~-----~-----------~~~-~~~~~~~ 115 (308)
.++|||+||++++.. .|..+++.|.++| ++|+.+|.+++|.+. +.. . ..+ ++++.++
T Consensus 4 ~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 4 MAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 567999999999887 6789999999876 789988887777521 110 0 001 3566789
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
++.++++.+.... +..+++++||||||.++..++.++ +++|+++|+++++.......
T Consensus 83 ~l~~~~~~l~~~~-~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------------- 144 (250)
T 3lp5_A 83 WLNTAFKALVKTY-HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------------- 144 (250)
T ss_dssp HHHHHHHHHHTTS-CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----------------
T ss_pred HHHHHHHHHHHHc-CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----------------
Confidence 9999999997664 556899999999999999999887 67899999999865432100
Q ss_pred CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC----CCcccCh
Q 035721 191 PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG----DDVVCDP 266 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~----~D~~~~~ 266 (308)
+ . ...... ..+ .+....+++ ++|+++|+|+ .|.++|.
T Consensus 145 ~---------~-----~~~~~~--------------------~~l----~~~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~ 185 (250)
T 3lp5_A 145 T---------T-----AKTSMF--------------------KEL----YRYRTGLPE-SLTVYSIAGTENYTSDGTVPY 185 (250)
T ss_dssp S---------S-----CCCHHH--------------------HHH----HHTGGGSCT-TCEEEEEECCCCCCTTTBCCH
T ss_pred c---------c-----ccCHHH--------------------HHH----HhccccCCC-CceEEEEEecCCCCCCceeeH
Confidence 0 0 000000 011 122344444 7999999999 9999999
Q ss_pred HHHHHHHHHhcCCCCc--EEEe--cCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKT--LSIY--PGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~--~~~~--~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++.+...++..... .+.+ ++++|..+ ++| ++.+.|.+++
T Consensus 186 ~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL 231 (250)
T 3lp5_A 186 NSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYL 231 (250)
T ss_dssp HHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHH
Confidence 9998888887532122 2334 35779999 877 7888888764
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=158.58 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=100.6
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~ 103 (308)
++..++..+...+|..|.+++|.|.. .+.|+||++||.+ ++.. .+..++..|+. .||.|+++|+|+.+..
T Consensus 57 ~~~~~~~~i~~~~G~~i~~~~~~P~~--~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~--- 130 (317)
T 3qh4_A 57 GVAVADDVVTGEAGRPVPVRIYRAAP--TPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARCAVVSVDYRLAPEH--- 130 (317)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEECSC--SSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred cceEEEEEecCCCCCeEEEEEEecCC--CCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCCEEEEecCCCCCCC---
Confidence 45567778888899899999998875 4689999999876 3444 34567777774 5999999999976643
Q ss_pred cccCCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCC
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGI 169 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 169 (308)
.+....+|+.++++++... .+ +..+++|+|||+||.+|+.++.+.++ .++++++++|....
T Consensus 131 -----~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 199 (317)
T 3qh4_A 131 -----PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDD 199 (317)
T ss_dssp -----CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCS
T ss_pred -----CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecC
Confidence 3445567777777777653 12 45689999999999999999987665 49999999997654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=155.38 Aligned_cols=214 Identities=13% Similarity=0.106 Sum_probs=128.6
Q ss_pred EEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHH---HHHHHHcCCeEEEecC--CCCcCCCCccc----
Q 035721 36 ITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLT---AVLFAKSGFATCAIDH--QGHGFSDGLVA---- 105 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~g~~v~~~d~--~G~G~s~~~~~---- 105 (308)
.....|..+.+.++.|++. ..+.|+||++||++++.. .|... .+.+++.||.|+++|+ ||+|.+.....
T Consensus 22 ~s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g 100 (282)
T 3fcx_A 22 DSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100 (282)
T ss_dssp EETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CC
T ss_pred EchhcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCcccccccccccccc
Confidence 3456788999999988752 246799999999998876 33333 6778888999999999 77665432100
Q ss_pred ---cCCC------c----chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 106 ---HIPD------L----NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 106 ---~~~~------~----~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
..+. . .....++..+++.+..... +..+++++|||+||.+|+.++.++|++++++++++|......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~ 180 (282)
T 3fcx_A 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180 (282)
T ss_dssp CCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG
T ss_pred CCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc
Confidence 0000 0 1111122244444443322 345899999999999999999999999999999998654321
Q ss_pred CCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc
Q 035721 172 KFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV 251 (308)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 251 (308)
. .+. .......+.. ....+.... .......+..+.+
T Consensus 181 ~---~~~----~~~~~~~~~~--------------------------~~~~~~~~~-----------~~~~~~~~~~~~~ 216 (282)
T 3fcx_A 181 C---PWG----KKAFSGYLGT--------------------------DQSKWKAYD-----------ATHLVKSYPGSQL 216 (282)
T ss_dssp S---HHH----HHHHHHHHC-----------------------------CCGGGGC-----------HHHHHTTCC---C
T ss_pred C---chh----HHHHHHhcCC--------------------------chhhhhhcC-----------HHHHHHhcccCCC
Confidence 0 000 0000000000 000000000 0122244556689
Q ss_pred ceEEEeeCCCcccChHH--HHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 252 PMLICHGGDDVVCDPAC--VEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
|+++++|++|.+++... .+.+.+.+. +.++++++++++||.+.
T Consensus 217 p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 217 DILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp CEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHH
T ss_pred cEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHH
Confidence 99999999999986543 334444443 24679999999999875
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=154.65 Aligned_cols=180 Identities=20% Similarity=0.170 Sum_probs=126.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCC------CCcCCCCc---------cc
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQ------GHGFSDGL---------VA 105 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~------G~G~s~~~---------~~ 105 (308)
.+.|....+..+ ++.|+|||+||+|++.. .|..+++.|..+ ++.+++++-| |.|.+-.. ..
T Consensus 52 ~l~y~~~p~~~~-~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~ 129 (285)
T 4fhz_A 52 KLTFGRRGAAPG-EATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETA 129 (285)
T ss_dssp CCCEEEEESCTT-CCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHH
T ss_pred cceeecCCCCCC-CCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccch
Confidence 455655555444 66899999999998876 456778888765 6788888744 33332110 00
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
....+...++++.++++.+..+.+ +..+++++|+|+||.+++.++.++|+++.++|.+++.....
T Consensus 130 ~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~-------------- 195 (285)
T 4fhz_A 130 AAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP-------------- 195 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH--------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc--------------
Confidence 000123334567777777665544 67799999999999999999999999999999888632100
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCccc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 264 (308)
+........++|+++++|++|.++
T Consensus 196 --------------------------------------------------------~~~~~~~~~~~Pvl~~hG~~D~~V 219 (285)
T 4fhz_A 196 --------------------------------------------------------ERLAEEARSKPPVLLVHGDADPVV 219 (285)
T ss_dssp --------------------------------------------------------HHHHHHCCCCCCEEEEEETTCSSS
T ss_pred --------------------------------------------------------hhhhhhhhhcCcccceeeCCCCCc
Confidence 000111234679999999999999
Q ss_pred ChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 265 DPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 265 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
|.+.++++.+.+.. .+++++++++.||.+.
T Consensus 220 p~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~ 251 (285)
T 4fhz_A 220 PFADMSLAGEALAEAGFTTYGHVMKGTGHGIA 251 (285)
T ss_dssp CTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Confidence 99999988887753 4578999999999876
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-21 Score=153.07 Aligned_cols=209 Identities=14% Similarity=0.085 Sum_probs=129.5
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.+.++++.|.+. .+.|+||++||.+ ++.. .+..++..|+. .||.|+++|+|+.+.. .+....+|+.
T Consensus 66 ~i~~~~~~p~~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~--------~~~~~~~D~~ 135 (322)
T 3fak_A 66 GCAAEWVRAPGC-QAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEH--------PFPAAVEDGV 135 (322)
T ss_dssp TEEEEEEECTTC-CTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHH
T ss_pred CeEEEEEeCCCC-CCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCC--------CCCcHHHHHH
Confidence 466777777654 5689999999966 3333 45567777776 5999999999976543 3445678888
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC----ccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA----WDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
++++++.....+..+++|+|||+||.+|+.++.+.+++ ++++|+++|......... . ... ....
T Consensus 136 ~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~--~----~~~----~~~~-- 203 (322)
T 3fak_A 136 AAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND--S----FKT----RAEA-- 203 (322)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT--H----HHH----TTTT--
T ss_pred HHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc--C----HHH----hCcc--
Confidence 88888876511667999999999999999999887664 999999999766432110 0 000 0000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
. .+...... .+....+........... ......+..+ .|+++++|+.|.++ .....+++
T Consensus 204 ----~-~~~~~~~~-~~~~~~~~~~~~~~~~~~------------sp~~~~~~~~-pP~li~~g~~D~~~--~~~~~~~~ 262 (322)
T 3fak_A 204 ----D-PMVAPGGI-NKMAARYLNGADAKHPYA------------SPNFANLKGL-PPLLIHVGRDEVLL--DDSIKLDA 262 (322)
T ss_dssp ----C-CSCCSSHH-HHHHHHHHTTSCTTCTTT------------CGGGSCCTTC-CCEEEEEETTSTTH--HHHHHHHH
T ss_pred ----C-cccCHHHH-HHHHHHhcCCCCCCCccc------------CCCcccccCC-ChHhEEEcCcCccH--HHHHHHHH
Confidence 0 00000000 011111111110000000 0111222222 49999999999875 56667766
Q ss_pred HhcC--CCCcEEEecCCccccc
Q 035721 275 RAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 275 ~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.. .+++++++++++|.+.
T Consensus 263 ~l~~~g~~~~~~~~~g~~H~~~ 284 (322)
T 3fak_A 263 KAKADGVKSTLEIWDDMIHVWH 284 (322)
T ss_dssp HHHHTTCCEEEEEETTCCTTGG
T ss_pred HHHHcCCCEEEEEeCCceeehh
Confidence 6642 4679999999999876
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-22 Score=174.93 Aligned_cols=233 Identities=9% Similarity=-0.048 Sum_probs=151.6
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
+..+...+...||.+|.+.++.|.+. ..+.|+||++||.++... ..|......|+++||.|+++|+||+|.+.....
T Consensus 478 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~ 557 (751)
T 2xe4_A 478 YKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWY 557 (751)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHH
T ss_pred eEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchh
Confidence 44566778888999999888777542 245799999999876543 123445667888999999999999998654221
Q ss_pred c----CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 106 H----IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 106 ~----~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
. ........+|+.++++++..... +..+++++|+|+||.+++.++.++|++++++|+.+|..........
T Consensus 558 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~----- 632 (751)
T 2xe4_A 558 EIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCD----- 632 (751)
T ss_dssp HTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTC-----
T ss_pred hccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcc-----
Confidence 1 00122456788888888876532 5679999999999999999999999999999999986542110000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-eEEEeeC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-MLICHGG 259 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~ 259 (308)
...+.. ...+. .+ ..+........+.. ......+.++++| +|+++|+
T Consensus 633 -------~~~~~~-------------------~~~~~----~~-g~p~~~~~~~~~~~-~sp~~~~~~~~~Pp~Lii~G~ 680 (751)
T 2xe4_A 633 -------PSIPLT-------------------TGEWE----EW-GNPNEYKYYDYMLS-YSPMDNVRAQEYPNIMVQCGL 680 (751)
T ss_dssp -------TTSTTH-------------------HHHTT----TT-CCTTSHHHHHHHHH-HCTGGGCCSSCCCEEEEEEET
T ss_pred -------cCcccc-------------------hhhHH----Hc-CCCCCHHHHHHHHh-cChhhhhccCCCCceeEEeeC
Confidence 000000 00000 00 00000001111111 1223456678897 9999999
Q ss_pred CCcccChHHHHHHHHHhcCC-----CCcEEEecCCccccc-CCch
Q 035721 260 DDVVCDPACVEELYKRAASK-----DKTLSIYPGMWHQLI-GEPE 298 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~-~~~~ 298 (308)
+|..+++..+.++++.++.. .+.+.+++++||.+. ..++
T Consensus 681 ~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 725 (751)
T 2xe4_A 681 HDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYK 725 (751)
T ss_dssp TCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhH
Confidence 99999999999998887532 123445599999987 4433
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=152.86 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=97.5
Q ss_pred ccceeEE-cCCCcEEEEEEecCCCC------CCCcceEEEEccCCCccchHHHH--HHHHHH-HcCCeEEEecCCCCcCC
Q 035721 31 HSSEYIT-NSRGLRLFTQWWTPLPP------AKTLGVLCVVHGFTGESSWIVQL--TAVLFA-KSGFATCAIDHQGHGFS 100 (308)
Q Consensus 31 ~~~~~~~-~~~g~~l~~~~~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~-~~g~~v~~~d~~G~G~s 100 (308)
.+...+. ...|.++.+.++.|.+. ..+.|+||++||++++.. .|.. ....+. +.|+.|+.+|+++.+.+
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 85 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGWYT 85 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTSTTS
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCccc
Confidence 3344443 45678899999988764 356799999999998877 4444 344444 46899999999988876
Q ss_pred CCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 101 DGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 101 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+..... ...+.+++|+..+++....... +..+++++|||+||.+|+.++. +|++++++|++++.....
T Consensus 86 ~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~ 154 (263)
T 2uz0_A 86 DTQYGF-DYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQ 154 (263)
T ss_dssp BCTTSC-BHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSS
T ss_pred cCCCcc-cHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchh
Confidence 544222 1245556777777776532111 3358999999999999999999 999999999999976543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-22 Score=153.57 Aligned_cols=211 Identities=18% Similarity=0.103 Sum_probs=130.6
Q ss_pred EEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccchHHHH--HHHHHHHcCCeEEEecCCCCcCCCCcccc-----
Q 035721 36 ITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESSWIVQL--TAVLFAKSGFATCAIDHQGHGFSDGLVAH----- 106 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----- 106 (308)
....+|.++.+.++.|.+ ...+.|+||++||++++...+... +.+.+.+.|+.|+++|.+++|.+......
T Consensus 23 ~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 23 VSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp EETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred eccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 345678899999999875 135689999999999887633222 55667777999999999987765432110
Q ss_pred ---CC------------C-cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 107 ---IP------------D-LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 107 ---~~------------~-~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
.+ . .....+++..+++.... ...+++|+|||+||.+|+.++.++|++++++|+++|.....
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~ 179 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFP---VSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPV 179 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSS---EEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGG
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCC---CCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccc
Confidence 00 0 11122344444432211 11489999999999999999999999999999999965432
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE 250 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 250 (308)
.. . .. .......+.. ....+..... ......+.. .
T Consensus 180 ~~---~-~~---~~~~~~~~~~--------------------------~~~~~~~~~~-----------~~~~~~~~~-~ 214 (280)
T 3i6y_A 180 NC---P-WG---QKAFTAYLGK--------------------------DTDTWREYDA-----------SLLMRAAKQ-Y 214 (280)
T ss_dssp GS---H-HH---HHHHHHHHCS--------------------------CGGGTGGGCH-----------HHHHHHCSS-C
T ss_pred cC---c-hH---HHHHHHhcCC--------------------------chHHHHhcCH-----------HHHHHhcCC-C
Confidence 10 0 00 0001111000 0000000000 011111211 5
Q ss_pred cceEEEeeCCCcccChHH-HHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 251 VPMLICHGGDDVVCDPAC-VEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
+|+++++|++|.+++.+. .+.+.+.+. +.++++++++|++|...
T Consensus 215 ~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 261 (280)
T 3i6y_A 215 VPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYY 261 (280)
T ss_dssp CCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHH
T ss_pred ccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHH
Confidence 799999999999998644 566666653 24579999999999765
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=152.22 Aligned_cols=208 Identities=8% Similarity=-0.024 Sum_probs=137.6
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCC--eEEEecCCCCcCCCC--cc---------------ccCCCcchHHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGF--ATCAIDHQGHGFSDG--LV---------------AHIPDLNPVVEDA 117 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~--~~---------------~~~~~~~~~~~d~ 117 (308)
+.++|||+||++++.. .|+.+++.|.+.|| +|+.+|.+++|.+.- .. ....++.+.++++
T Consensus 5 ~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 5 KTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 3578999999999887 66899999999886 699999998886421 00 0011334578889
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
.++++.+.... +..++.++||||||.+++.++.++|+ +|+++|+++++............. .
T Consensus 84 ~~~i~~l~~~~-~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~-------~----- 150 (249)
T 3fle_A 84 KEVLSQLKSQF-GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNE-------I----- 150 (249)
T ss_dssp HHHHHHHHHTT-CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTT-------S-----
T ss_pred HHHHHHHHHHh-CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcch-------h-----
Confidence 99998887654 55689999999999999999999874 799999999865432111000000 0
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC------CCcccCh
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG------DDVVCDP 266 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~ 266 (308)
.... . ......... +..+ ......+++.++|++.|+|+ .|..||.
T Consensus 151 -~~~~-~---g~p~~~~~~--------------------~~~l----~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~ 201 (249)
T 3fle_A 151 -IVDK-Q---GKPSRMNAA--------------------YRQL----LSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSN 201 (249)
T ss_dssp -CBCT-T---CCBSSCCHH--------------------HHHT----GGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBH
T ss_pred -hhcc-c---CCCcccCHH--------------------HHHH----HHHHhhCCccCCeEEEEeccCCCCCCCCCcccH
Confidence 0000 0 000000000 0011 12234456578999999998 6999999
Q ss_pred HHHHHHHHHhcCC--CCcEEEecC--Cccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASK--DKTLSIYPG--MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~-~~~~~~~~~i~~~i 308 (308)
..++.+...++.. ..+.+++.| +.|... +++ ++.+.|.+++
T Consensus 202 ~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 202 SSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp HHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 9998887777532 124455655 999999 766 6777776653
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=156.32 Aligned_cols=117 Identities=9% Similarity=0.006 Sum_probs=83.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+|..+ ..+.|.+ .+.|+||++||.+ ++.. .|..++..|+. .||.|+++|+||.+.. ......
T Consensus 81 ~~~~~~--~~~~p~~--~~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~--------~~~~~~ 147 (326)
T 3d7r_A 81 LDDMQV--FRFNFRH--QIDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEF--------HIDDTF 147 (326)
T ss_dssp ETTEEE--EEEESTT--CCSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTS--------CHHHHH
T ss_pred ECCEEE--EEEeeCC--CCCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCC--------CchHHH
Confidence 355444 3455543 3478999999965 2333 45677788874 5999999999986542 233345
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC----ccEEEEeCCcCCC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA----WDGLILNGAMCGI 169 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~ 169 (308)
+|+.++++++.... +..+++|+|||+||.+|+.++.++|++ ++++|+++|....
T Consensus 148 ~d~~~~~~~l~~~~-~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~ 205 (326)
T 3d7r_A 148 QAIQRVYDQLVSEV-GHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDA 205 (326)
T ss_dssp HHHHHHHHHHHHHH-CGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred HHHHHHHHHHHhcc-CCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECccccc
Confidence 55555555554332 445999999999999999999988776 9999999997654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-21 Score=152.69 Aligned_cols=223 Identities=15% Similarity=0.108 Sum_probs=132.7
Q ss_pred cCCCcEEEEEEecCCCCCCCcce-EEEEccCC---CccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcch
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGV-LCVVHGFT---GESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNP 112 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~-vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~ 112 (308)
+.+|..+ | .|... .+.++ ||++||.+ ++.. .+..++..|+.. ||.|+++|+|+.+.+. +..
T Consensus 64 ~~~g~~~-~---~p~~~-~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~--------~~~ 129 (322)
T 3k6k_A 64 DLGGVPC-I---RQATD-GAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATLWSLDYRLAPENP--------FPA 129 (322)
T ss_dssp EETTEEE-E---EEECT-TCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEEEEECCCCTTTSC--------TTH
T ss_pred EECCEeE-E---ecCCC-CCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEEEEeeCCCCCCCC--------Cch
Confidence 3477776 3 23332 33566 99999966 4444 456788888765 9999999999887543 344
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC----ccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA----WDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
..+|+.++++++.....+..+++|+|||+||.+|+.++.+.+++ ++++|+++|......... ..... ..
T Consensus 130 ~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~------~~~~~-~~ 202 (322)
T 3k6k_A 130 AVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRW------SNSNL-AD 202 (322)
T ss_dssp HHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSH------HHHHT-GG
T ss_pred HHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCcc------chhhc-cC
Confidence 56777777777765511566999999999999999999988765 999999999765432110 00000 00
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
. . ...... ........+........... ......+. ...|+++++|++|.++ ..
T Consensus 203 ~---------~-~~~~~~-~~~~~~~~~~~~~~~~~~~~------------sp~~~~~~-~~pP~li~~G~~D~~~--~~ 256 (322)
T 3k6k_A 203 R---------D-FLAEPD-TLGEMSELYVGGEDRKNPLI------------SPVYADLS-GLPEMLIHVGSEEALL--SD 256 (322)
T ss_dssp G---------C-SSSCHH-HHHHHHHHHHTTSCTTCTTT------------CGGGSCCT-TCCCEEEEEESSCTTH--HH
T ss_pred C---------C-CcCCHH-HHHHHHHHhcCCCCCCCCcC------------Cccccccc-CCCcEEEEECCcCccH--HH
Confidence 0 0 000000 00000111111000000000 01111122 2359999999999874 56
Q ss_pred HHHHHHHhc--CCCCcEEEecCCccccc-CC-----chhhHHHhhhc
Q 035721 269 VEELYKRAA--SKDKTLSIYPGMWHQLI-GE-----PEENVELVFGE 307 (308)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~-----~~~~~~~i~~~ 307 (308)
+..+++.+. +.++++++++|++|.+. .. ++++.+.+.++
T Consensus 257 ~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 303 (322)
T 3k6k_A 257 STTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHW 303 (322)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHH
Confidence 667766664 24679999999999876 43 34555555443
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-21 Score=155.07 Aligned_cols=185 Identities=12% Similarity=0.113 Sum_probs=135.3
Q ss_pred ccceeEEcC-CCcEEEEEEecCCC--CCCCcceEEEEccCCCccch-HHHH----------HHHHHHHcCCeEEEecCCC
Q 035721 31 HSSEYITNS-RGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESSW-IVQL----------TAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 31 ~~~~~~~~~-~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~~-~~~~----------~~~~l~~~g~~v~~~d~~G 96 (308)
++...+... +|.++.+.++.|.+ ...+.|+||++||++++... .+.. ........|+.|+++|.+|
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC
Confidence 445567777 89999999999876 23456899999999865421 1111 1122335678999999998
Q ss_pred CcCCCCc---cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 97 HGFSDGL---VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 97 ~G~s~~~---~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
.+..... ...........+|+.++++.+..... +..+++++|||+||.+++.++.++|+++++++++++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~---- 299 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD---- 299 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC----
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC----
Confidence 6543321 11112335567788888888877654 456899999999999999999999999999999998530
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-Cc
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EV 251 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~ 251 (308)
...+..+ .+
T Consensus 300 ----------------------------------------------------------------------~~~~~~~~~~ 309 (380)
T 3doh_A 300 ----------------------------------------------------------------------VSKVERIKDI 309 (380)
T ss_dssp ----------------------------------------------------------------------GGGGGGGTTS
T ss_pred ----------------------------------------------------------------------hhhhhhccCC
Confidence 0112233 37
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCC
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGM 289 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 289 (308)
|+++++|++|..+|++.++.+.+.+.. .++++++++++
T Consensus 310 P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 349 (380)
T 3doh_A 310 PIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKG 349 (380)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCC
Confidence 999999999999999999999888753 35789999999
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-21 Score=153.43 Aligned_cols=134 Identities=22% Similarity=0.175 Sum_probs=99.6
Q ss_pred ccccccceeEEcCCCcEEEEEEec-CCCC----------------------CCCcceEEEEccCCCc---cc-hHHHHHH
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWT-PLPP----------------------AKTLGVLCVVHGFTGE---SS-WIVQLTA 79 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~-~~~~----------------------~~~~~~vv~~hG~~~~---~~-~~~~~~~ 79 (308)
.++..+...+...+| +.++.|. |... ..+.|+||++||.+.. .. ..+..++
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~ 137 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLC 137 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHH
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHH
Confidence 356667777878888 6666665 6431 2357999999997642 22 2356788
Q ss_pred HHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc----C-CCC-CEEEEEechhhHHHHHHHHh
Q 035721 80 VLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH----A-PDL-PAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 80 ~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~----~-~~~-~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..|+.+ ||.|+++|+|+.+.. .+....+|+.++++++.... + +.. +++|+|+|+||.+|+.++.+
T Consensus 138 ~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~ 209 (365)
T 3ebl_A 138 RRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVR 209 (365)
T ss_dssp HHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHH
Confidence 888876 999999999975432 45566789999999997542 2 566 99999999999999999988
Q ss_pred cCC---CccEEEEeCCcCCCC
Q 035721 153 QKG---AWDGLILNGAMCGIS 170 (308)
Q Consensus 153 ~p~---~v~~~vl~~~~~~~~ 170 (308)
.++ +++++|+++|.....
T Consensus 210 ~~~~~~~~~g~vl~~p~~~~~ 230 (365)
T 3ebl_A 210 AADEGVKVCGNILLNAMFGGT 230 (365)
T ss_dssp HHHTTCCCCEEEEESCCCCCS
T ss_pred HHhcCCceeeEEEEccccCCC
Confidence 765 799999999976543
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=148.54 Aligned_cols=189 Identities=15% Similarity=0.132 Sum_probs=116.8
Q ss_pred CcceEEEEccCCCccchHHH----HHHHHHHHcCCeEEEecCCC---------------------CcCCCCcc-----cc
Q 035721 57 TLGVLCVVHGFTGESSWIVQ----LTAVLFAKSGFATCAIDHQG---------------------HGFSDGLV-----AH 106 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G---------------------~G~s~~~~-----~~ 106 (308)
++|+|||+||++++.. .|. .+.+.|.+.||+|+++|+|+ +|.+.... ..
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 4688999999999887 333 57778877799999999993 33331100 00
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC------CCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK------GAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
..++.+.++.+.+.++ . .+.+++|+||||||.+|+.++.+++ ..++.++++++........
T Consensus 83 ~~d~~~~~~~l~~~~~---~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~------- 149 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIK---A---NGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP------- 149 (243)
T ss_dssp GCCCHHHHHHHHHHHH---H---HCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-------
T ss_pred hhhHHHHHHHHHHHHH---h---cCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-------
Confidence 1133333333333332 2 2247999999999999999998753 2477788777643211100
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
. .. .. ...... + ......+.++++|+++++|++
T Consensus 150 -------~-~~---------~~--~~~~~~-----~-----------------------~~~~~~~~~~~~P~l~i~G~~ 182 (243)
T 1ycd_A 150 -------E-HP---------GE--LRITEK-----F-----------------------RDSFAVKPDMKTKMIFIYGAS 182 (243)
T ss_dssp -------T-ST---------TC--EEECGG-----G-----------------------TTTTCCCTTCCCEEEEEEETT
T ss_pred -------c-cc---------cc--cccchh-----H-----------------------HHhccCcccCCCCEEEEEeCC
Confidence 0 00 00 000000 0 000123456889999999999
Q ss_pred CcccChHHHHHHHHHhcCC-----CCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 261 DVVCDPACVEELYKRAASK-----DKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
|.++|++.++.+++.++.. ....++++++||.+..+ +.+.+.+.++
T Consensus 183 D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~-~~~~~~i~~f 233 (243)
T 1ycd_A 183 DQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK-KDIIRPIVEQ 233 (243)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC-HHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch-HHHHHHHHHH
Confidence 9999999999998888421 13566778899988732 2466666554
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=168.26 Aligned_cols=254 Identities=14% Similarity=0.080 Sum_probs=153.9
Q ss_pred EcCCCcE--EEEEEecCCCCCCCcceEEEEccCCCccch-----------------------------------------
Q 035721 37 TNSRGLR--LFTQWWTPLPPAKTLGVLCVVHGFTGESSW----------------------------------------- 73 (308)
Q Consensus 37 ~~~~g~~--l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~----------------------------------------- 73 (308)
...||.+ |...++.|.+. .+.|+||..||++.....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~-~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 257 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST-EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPI 257 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS-SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCE
T ss_pred cCCCCCeeeEEEEEEecCCC-CcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccccc
Confidence 4679999 99999999864 567899999998754110
Q ss_pred ------HH-----HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---------------
Q 035721 74 ------IV-----QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR--------------- 127 (308)
Q Consensus 74 ------~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~--------------- 127 (308)
.| ..+.+.|+++||.|+++|.||+|.|++.... .....++|+.++++++...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~--~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q 335 (763)
T 1lns_A 258 VDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTS--GDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKA 335 (763)
T ss_dssp ESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCT--TSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECC
T ss_pred cccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCC--CCHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence 00 0245788899999999999999999876432 2235689999999999742
Q ss_pred cCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC-------CchhhhhHHHh-hhhCCCcccccCC
Q 035721 128 HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHLLFTV-AWLVPTWRVVPTR 199 (308)
Q Consensus 128 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~ 199 (308)
..+..+|+++|+|+||.+++.+|..+|++++++|..++.......... ..........+ ......
T Consensus 336 ~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~------- 408 (763)
T 1lns_A 336 SWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSR------- 408 (763)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGG-------
T ss_pred cCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhh-------
Confidence 012358999999999999999999999999999999886421110000 00000000000 000000
Q ss_pred CCCCCcccc--cHHH---HHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 200 GSLPMVSFK--EEWK---RKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 200 ~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
........ .... ............... . .+... .+....+.+|++|+|+++|..|..+++..+.++++
T Consensus 409 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~w~~-~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~ 481 (763)
T 1lns_A 409 -NLDGADFLKGNAEYEKRLAEMTAALDRKSGDY--N---QFWHD-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWK 481 (763)
T ss_dssp -GGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCC--C---HHHHT-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHH
T ss_pred -hcCcchhhhHHHHHHHHHHHHHhhhhhccCch--h---HHhhc-cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHH
Confidence 00000000 0000 000000000000000 0 00000 12345678899999999999999999999999999
Q ss_pred HhcCCCCcEEEecCCccccc-C-CchhhHHHhhhc
Q 035721 275 RAASKDKTLSIYPGMWHQLI-G-EPEENVELVFGE 307 (308)
Q Consensus 275 ~~~~~~~~~~~~~~~gH~~~-~-~~~~~~~~i~~~ 307 (308)
.++.......++.++||... + .+..+.+.+.++
T Consensus 482 al~~~~~~~l~i~~~gH~~~~~~~~~~~~~~i~~F 516 (763)
T 1lns_A 482 ALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAY 516 (763)
T ss_dssp HSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHH
T ss_pred hhccCCCeEEEEeCCcccCccccchHHHHHHHHHH
Confidence 99531123445577999987 4 555566666544
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.1e-21 Score=149.15 Aligned_cols=211 Identities=18% Similarity=0.147 Sum_probs=128.6
Q ss_pred EEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccchHHHH---HHHHHHHcCCeEEEecCCCCcCCCCcccc----
Q 035721 36 ITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIVQL---TAVLFAKSGFATCAIDHQGHGFSDGLVAH---- 106 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---- 106 (308)
.....|.++.+.++.|.+. ..+.|+||++||++++.. .|.. +.+.+.+.|+.|+++|.+++|.+......
T Consensus 21 ~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g 99 (280)
T 3ls2_A 21 SAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFA 99 (280)
T ss_dssp EETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSS
T ss_pred echhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccc
Confidence 3456788999999998762 356799999999988876 3333 55667777999999999877765322100
Q ss_pred ----CC------------C-cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 107 ----IP------------D-LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 107 ----~~------------~-~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.+ . .....+++..+++. ......+++++|||+||.+|+.++.++|++++++++++|....
T Consensus 100 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~ 176 (280)
T 3ls2_A 100 QGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQ---HFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNP 176 (280)
T ss_dssp TTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHH---HSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCG
T ss_pred cCCccccccccccccccccHHHHHHHHHHHHHHh---hCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCc
Confidence 00 0 11122344444433 2111248999999999999999999999999999999986543
Q ss_pred CcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC-C
Q 035721 170 SQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE-E 248 (308)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 248 (308)
... .+ . .......+.. ....+..... ......+. .
T Consensus 177 ~~~---~~-~---~~~~~~~~g~--------------------------~~~~~~~~~~-----------~~~~~~~~~~ 212 (280)
T 3ls2_A 177 INC---PW-G---VKAFTGYLGA--------------------------DKTTWAQYDS-----------CKLMAKAEQS 212 (280)
T ss_dssp GGS---HH-H---HHHHHHHHCS--------------------------CGGGTGGGCH-----------HHHHHTCCGG
T ss_pred ccC---cc-h---hhHHHhhcCc--------------------------hHHHHHhcCH-----------HHHHHhcccc
Confidence 210 00 0 0000111000 0000000000 01111111 1
Q ss_pred CCcceEEEeeCCCcccChHH-HHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 249 VEVPMLICHGGDDVVCDPAC-VEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
..+|+++++|++|.+++.+. .+.+.+.+. +.++++++++|++|.+.
T Consensus 213 ~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 261 (280)
T 3ls2_A 213 NYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYF 261 (280)
T ss_dssp GCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHH
T ss_pred CCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchh
Confidence 35799999999999998732 444444442 24689999999999865
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-22 Score=161.30 Aligned_cols=124 Identities=13% Similarity=-0.027 Sum_probs=79.8
Q ss_pred EEEEEEecCCCC--CCCcceEEEEccCCCccch----------HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC-
Q 035721 43 RLFTQWWTPLPP--AKTLGVLCVVHGFTGESSW----------IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD- 109 (308)
Q Consensus 43 ~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~----------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~- 109 (308)
.+...++.|... ..+.|+||++||++++... .+..++..|.++||.|+++|+||+|.|.........
T Consensus 62 ~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~ 141 (397)
T 3h2g_A 62 TASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHS 141 (397)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCH
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhh
Confidence 566777776542 2457899999999886542 134678888899999999999999998643322111
Q ss_pred ------cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-cC-----CCccEEEEeCCcCC
Q 035721 110 ------LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR-QK-----GAWDGLILNGAMCG 168 (308)
Q Consensus 110 ------~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p-----~~v~~~vl~~~~~~ 168 (308)
+.+.++++..+++.++.. +..+++++|||+||.+++.++.. .+ -.+.+++..++...
T Consensus 142 ~~~~~~~~d~~~~~~~~~~~~~~~--~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 142 ASEASATIDAMRAARSVLQHLKTP--LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCC--CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 222222333333333221 13499999999999999888732 22 14666666655443
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-21 Score=145.38 Aligned_cols=201 Identities=13% Similarity=0.022 Sum_probs=131.1
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCC---eEEEecCCCCc------CCC----Cc------cccCCCcchHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGF---ATCAIDHQGHG------FSD----GL------VAHIPDLNPVVEDAI 118 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G------~s~----~~------~~~~~~~~~~~~d~~ 118 (308)
.++|||+||++++.. .|..+++.|.++++ .+++++..+.| .+. .+ .....+++.+++++.
T Consensus 3 ~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 3 QIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 567999999999887 56899999998754 23443333332 121 11 012247888899998
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++++.+.... +..+++++||||||.+++.++.++|+ +|+++|+++++...... .. .....
T Consensus 82 ~~i~~l~~~~-~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~----------~~----~~~~~ 146 (254)
T 3ds8_A 82 IAMEDLKSRY-GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP----------ND----NGMDL 146 (254)
T ss_dssp HHHHHHHHHH-CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH----------HH----HCSCT
T ss_pred HHHHHHHHHh-CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc----------cc----ccccc
Confidence 8888887664 55699999999999999999999998 89999999986543211 00 00000
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC------CCcccChH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG------DDVVCDPA 267 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~ 267 (308)
... .... .. .++.........+.. ++|++.|+|. .|.+||.+
T Consensus 147 ~~~----~~p~---~~------------------------~~~~~~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ 194 (254)
T 3ds8_A 147 SFK----KLPN---ST------------------------PQMDYFIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTI 194 (254)
T ss_dssp TCS----SCSS---CC------------------------HHHHHHHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHH
T ss_pred ccc----cCCc---ch------------------------HHHHHHHHHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHH
Confidence 000 0000 00 000011122333443 7899999999 99999999
Q ss_pred HHHHHHHHhcCC--CCcEEEecC--Cccccc-CCchhhHHHhhhc
Q 035721 268 CVEELYKRAASK--DKTLSIYPG--MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 268 ~~~~~~~~~~~~--~~~~~~~~~--~gH~~~-~~~~~~~~~i~~~ 307 (308)
.++.+...++.. ..+...+.+ ++|..+ ++|+ +.+.+..+
T Consensus 195 ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~f 238 (254)
T 3ds8_A 195 SSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWF 238 (254)
T ss_dssp HHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHH
T ss_pred HHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHH
Confidence 999888777531 234455665 779999 7664 77777654
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=157.96 Aligned_cols=141 Identities=12% Similarity=0.050 Sum_probs=107.6
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH-------------HH----HHHHHHHHcCCeE
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI-------------VQ----LTAVLFAKSGFAT 89 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-------------~~----~~~~~l~~~g~~v 89 (308)
.++..+...+.+.+|.++.+.++.|.+...+.|+||++||++++.... ++ .+++.|+++||.|
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~V 162 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVA 162 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEE
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEE
Confidence 356667778888899999999998876335689999999998765411 12 5788999999999
Q ss_pred EEecCCCCcCCCCccccC----CCcchH---------------HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHH
Q 035721 90 CAIDHQGHGFSDGLVAHI----PDLNPV---------------VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYI 149 (308)
Q Consensus 90 ~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~ 149 (308)
+++|+||+|.|....... +....+ +.|+.++++++..... +..++.++||||||.+++.+
T Consensus 163 l~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~ 242 (391)
T 3g8y_A 163 VAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVL 242 (391)
T ss_dssp EECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHH
Confidence 999999999998653211 122222 2688888998876533 45689999999999999988
Q ss_pred HHhcCCCccEEEEeCCcCC
Q 035721 150 TLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 150 a~~~p~~v~~~vl~~~~~~ 168 (308)
+... ++++++|++++...
T Consensus 243 a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 243 GVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHC-TTCCEEEEESCBCC
T ss_pred HHcC-CceeEEEEccCCCC
Confidence 8765 57999998887544
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-21 Score=148.08 Aligned_cols=105 Identities=14% Similarity=0.124 Sum_probs=76.9
Q ss_pred cceEEEEccCCCcc---chHHHHHHHHHHHc--CCeEEEecCCCCcCCCCcc-ccCCCcchHHHHHHHHHHHHHHhcCCC
Q 035721 58 LGVLCVVHGFTGES---SWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLV-AHIPDLNPVVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 58 ~~~vv~~hG~~~~~---~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~~ 131 (308)
.++|||+||++++. . .|..+.+.|.+. |++|+++|+ |+|.|.... ....++.+.++++.+.++.+.. ..
T Consensus 5 ~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~---l~ 79 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPK---LQ 79 (279)
T ss_dssp SCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG---GT
T ss_pred CCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhh---cc
Confidence 45699999999876 4 568899999876 789999998 999875321 1112444444444444432111 11
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCC-ccEEEEeCCcC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGA-WDGLILNGAMC 167 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~ 167 (308)
.+++++||||||.++..++.++|++ |+++|+++++.
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 4999999999999999999999984 99999998643
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=144.28 Aligned_cols=212 Identities=15% Similarity=0.087 Sum_probs=127.6
Q ss_pred eEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHH--HHHHHHHHHcCCeEEEecCCCCcC------------
Q 035721 35 YITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIV--QLTAVLFAKSGFATCAIDHQGHGF------------ 99 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~------------ 99 (308)
......|.++.+.++.|.+. ..+.|+||++||++++...+. ..+...+.+.|+.|+++|.+++|.
T Consensus 27 ~~s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~ 106 (283)
T 4b6g_A 27 HHAQTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQ 106 (283)
T ss_dssp EEETTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBT
T ss_pred EechhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccC
Confidence 34555788999999998763 356899999999988776331 134566777799999999764432
Q ss_pred --CCCcccc------CCC-cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 100 --SDGLVAH------IPD-LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 100 --s~~~~~~------~~~-~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+...... ... ....++++..+++.... ...+++|+|||+||.+|+.++.++|++++++++++|.....
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~ 183 (283)
T 4b6g_A 107 SAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP---TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPS 183 (283)
T ss_dssp TBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC---EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGG
T ss_pred CCcccccCccCcccchhhHHHHHHHHHHHHHHHhCC---CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccc
Confidence 2110000 001 11223455555544311 22489999999999999999999999999999999865432
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE 250 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 250 (308)
.. . ... ......+.. ....+..... ......+. ..
T Consensus 184 ~~---~-~~~---~~~~~~~g~--------------------------~~~~~~~~~~-----------~~~~~~~~-~~ 218 (283)
T 4b6g_A 184 LV---P-WGE---KAFTAYLGK--------------------------DREKWQQYDA-----------NSLIQQGY-KV 218 (283)
T ss_dssp GS---H-HHH---HHHHHHHCS--------------------------CGGGGGGGCH-----------HHHHHHTC-CC
T ss_pred cC---c-chh---hhHHhhcCC--------------------------chHHHHhcCH-----------HHHHHhcc-cC
Confidence 10 0 000 000111000 0000000000 01111111 34
Q ss_pred cceEEEeeCCCcccChHH-HHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 251 VPMLICHGGDDVVCDPAC-VEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
.|+++++|+.|.+++... .+.+.+.+. +.++++.+++|++|...
T Consensus 219 ~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 265 (283)
T 4b6g_A 219 QGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYY 265 (283)
T ss_dssp SCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHH
T ss_pred CCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHh
Confidence 699999999999997621 455554443 24689999999999865
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=153.03 Aligned_cols=216 Identities=13% Similarity=0.012 Sum_probs=134.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|+|+||++++.. .|..+++.|. .+|+|+++|+||+|.+... ..+++++++++.+.++.+.. ..+++++
T Consensus 101 ~~~l~~lhg~~~~~~-~~~~l~~~L~-~~~~v~~~d~~g~~~~~~~---~~~~~~~a~~~~~~i~~~~~----~~~~~l~ 171 (329)
T 3tej_A 101 GPTLFCFHPASGFAW-QFSVLSRYLD-PQWSIIGIQSPRPNGPMQT---AANLDEVCEAHLATLLEQQP----HGPYYLL 171 (329)
T ss_dssp SCEEEEECCTTSCCG-GGGGGGGTSC-TTCEEEEECCCTTTSHHHH---CSSHHHHHHHHHHHHHHHCS----SSCEEEE
T ss_pred CCcEEEEeCCcccch-HHHHHHHhcC-CCCeEEEeeCCCCCCCCCC---CCCHHHHHHHHHHHHHHhCC----CCCEEEE
Confidence 678999999998876 6678888885 4699999999999876532 23788888887777766532 2399999
Q ss_pred EechhhHHHHHHHHh---cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH-HHH
Q 035721 138 SESLGGAIALYITLR---QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE-WKR 213 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (308)
||||||.+|..+|.+ +|++|.+++++++............ .. .+........ ...
T Consensus 172 G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~ 230 (329)
T 3tej_A 172 GYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKE--------------------AN-GLDPEVLAEINRER 230 (329)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC--------------------------CCCCTHHHHHHHHH
T ss_pred EEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcccccccc--------------------cc-ccChhhHHHHHHHH
Confidence 999999999999999 9999999999998654211000000 00 0000000000 000
Q ss_pred HHHhhCCCCCCCcchHHHHHHHHHHHHHhhh--hcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcc
Q 035721 214 KLALSSPRRPVARPRAATALELLRVSRDLQG--RFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH 291 (308)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 291 (308)
............................... ....+.+|++++.|++|...+.+....+.+.. ++++++.++ +||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~--~~~~~~~v~-g~H 307 (329)
T 3tej_A 231 EAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI--AELDIYRQD-CAH 307 (329)
T ss_dssp HHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE--EEEEEEEES-SCG
T ss_pred HHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc--CCcEEEEec-CCh
Confidence 0011110111111111112222211111111 24567899999999999887766655555555 468999998 899
Q ss_pred ccc-CCc--hhhHHHhhh
Q 035721 292 QLI-GEP--EENVELVFG 306 (308)
Q Consensus 292 ~~~-~~~--~~~~~~i~~ 306 (308)
+.+ ++| +.+.+.+.+
T Consensus 308 ~~~~~~~~~~~ia~~l~~ 325 (329)
T 3tej_A 308 VDIISPGTFEKIGPIIRA 325 (329)
T ss_dssp GGGGSTTTHHHHHHHHHH
T ss_pred HHhCCChHHHHHHHHHHH
Confidence 977 666 556555544
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=157.02 Aligned_cols=163 Identities=13% Similarity=0.149 Sum_probs=117.2
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc---------------------cc------CC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV---------------------AH------IP 108 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---------------------~~------~~ 108 (308)
.+.|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|.... .. ..
T Consensus 96 ~~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SCEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 45799999999998877 5578999999999999999999999875310 00 00
Q ss_pred CcchHHHHHHHHHHHHHHh--------------------cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 109 DLNPVVEDAISFFDSFRAR--------------------HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~--------------------~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+...++|+..+++.+... .. +..+++++|||+||.+++.++...+ +++++|++++..
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~ 253 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWM 253 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCcc
Confidence 1223357888888877541 11 3458999999999999999988766 699999998742
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE 247 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (308)
... . .+.+.
T Consensus 254 ~p~--------------------------------~---------------------------------------~~~~~ 262 (383)
T 3d59_A 254 FPL--------------------------------G---------------------------------------DEVYS 262 (383)
T ss_dssp TTC--------------------------------C---------------------------------------GGGGG
T ss_pred CCC--------------------------------c---------------------------------------hhhhc
Confidence 100 0 01235
Q ss_pred CCCcceEEEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 248 EVEVPMLICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 248 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
++++|+|+++|++|... ...+.+ +.+. ..+++++++++++|..+
T Consensus 263 ~i~~P~Lii~g~~D~~~--~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~ 308 (383)
T 3d59_A 263 RIPQPLFFINSEYFQYP--ANIIKM-KKCYSPDKERKMITIRGSVHQNF 308 (383)
T ss_dssp SCCSCEEEEEETTTCCH--HHHHHH-HTTCCTTSCEEEEEETTCCGGGG
T ss_pred cCCCCEEEEecccccch--hhHHHH-HHHHhcCCceEEEEeCCCcCCCc
Confidence 67899999999999754 333333 3332 24678999999999985
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-19 Score=137.10 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=123.8
Q ss_pred cCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccchH------HHHHHHHHHHc----CCeEEEecCCCCcCCCCccc
Q 035721 38 NSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWI------VQLTAVLFAKS----GFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~------~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~ 105 (308)
..+|..+.+.++.|.+. ..+.|+||++||++++...+ +..+++.|.++ ||.|+++|+++++.+...
T Consensus 40 ~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~-- 117 (268)
T 1jjf_A 40 TATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD-- 117 (268)
T ss_dssp TTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC--
T ss_pred cccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc--
Confidence 34678899999988752 34679999999998765422 23457778776 499999999998754221
Q ss_pred cCCCcchHHHH-HHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 106 HIPDLNPVVED-AISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 106 ~~~~~~~~~~d-~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
......++ +.++++.+..... +..+++++|||+||.+++.++.++|+++++++++++...... .
T Consensus 118 ---~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~-------~-- 185 (268)
T 1jjf_A 118 ---GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYP-------N-- 185 (268)
T ss_dssp ---HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCC-------H--
T ss_pred ---cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCc-------h--
Confidence 12222232 3444454544321 346899999999999999999999999999999998543210 0
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCc-ceEEEeeCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEV-PMLICHGGD 260 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~ 260 (308)
...+. .. . ... .... |+++++|++
T Consensus 186 -----~~~~~---------~~------------------------~------------~~~-----~~~~pp~li~~G~~ 210 (268)
T 1jjf_A 186 -----ERLFP---------DG------------------------G------------KAA-----REKLKLLFIACGTN 210 (268)
T ss_dssp -----HHHCT---------TT------------------------T------------HHH-----HHHCSEEEEEEETT
T ss_pred -----hhhcC---------cc------------------------h------------hhh-----hhcCceEEEEecCC
Confidence 00000 00 0 000 1123 499999999
Q ss_pred CcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 261 DVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
|.+++. .+.+.+.+. +.+++++++++++|.+.
T Consensus 211 D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 244 (268)
T 1jjf_A 211 DSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN 244 (268)
T ss_dssp CTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH
T ss_pred CCCccH--HHHHHHHHHHCCCceEEEEcCCCCcCHh
Confidence 999874 455555553 24689999999999875
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-20 Score=158.03 Aligned_cols=140 Identities=16% Similarity=0.108 Sum_probs=109.0
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc---c---hHHH-HHH---HHHHHcCCeEEEecCCCCc
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES---S---WIVQ-LTA---VLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~---~~~~-~~~---~~l~~~g~~v~~~d~~G~G 98 (308)
+..+...+...||.+|++.++.|.+. .+.|+||++||++.+. . ..|. .+. +.|+++||.|+.+|+||+|
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g 101 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKY 101 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCC
Confidence 34456778889999999999988764 4578999999988753 1 1122 233 7899999999999999999
Q ss_pred CCCCccccCCC----cc----hHHHHHHHHHHHHHHh-cCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 99 FSDGLVAHIPD----LN----PVVEDAISFFDSFRAR-HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 99 ~s~~~~~~~~~----~~----~~~~d~~~~l~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.|.+....... +. ..++|+.++++++..+ .....++.++|+|+||.+++.+|..++++++++|.+++....
T Consensus 102 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 102 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 181 (615)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred CCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcccc
Confidence 99875432100 12 5689999999999876 333348999999999999999999889999999999998763
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=140.15 Aligned_cols=186 Identities=17% Similarity=0.198 Sum_probs=122.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCC-----------c---CCCCcc--
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGH-----------G---FSDGLV-- 104 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~-----------G---~s~~~~-- 104 (308)
.+.|.+..|.. +.+++|||+||+|++.. .+..+++.|... ++.+++++-+-. . ......
T Consensus 24 ~l~y~ii~P~~--~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~ 100 (246)
T 4f21_A 24 AMNYELMEPAK--QARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANS 100 (246)
T ss_dssp CCCEEEECCSS--CCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---C
T ss_pred CcCceEeCCCC--cCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccc
Confidence 56788887765 45789999999998877 334666666432 577888765321 1 110000
Q ss_pred -c---cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 -A---HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 -~---~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
. ....+...++.+..+++......-+..++++.|+|+||.+++.++.++|+++.++|.+++......
T Consensus 101 ~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~--------- 171 (246)
T 4f21_A 101 LNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD--------- 171 (246)
T ss_dssp GGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH---------
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc---------
Confidence 0 011233444556666655433211667999999999999999999999999999999988532110
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhc--CCCCcceEEEee
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRF--EEVEVPMLICHG 258 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g 258 (308)
...... ...++|++++||
T Consensus 172 ------------------------------------------------------------~~~~~~~~~~~~~Pvl~~HG 191 (246)
T 4f21_A 172 ------------------------------------------------------------NFKGKITSINKGLPILVCHG 191 (246)
T ss_dssp ------------------------------------------------------------HHSTTCCGGGTTCCEEEEEE
T ss_pred ------------------------------------------------------------cccccccccccCCchhhccc
Confidence 000000 123579999999
Q ss_pred CCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc-CCchhh
Q 035721 259 GDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI-GEPEEN 300 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~ 300 (308)
++|+++|.+.++++.+.+.. .++++..+++.||.+. ++-+.+
T Consensus 192 ~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~ 236 (246)
T 4f21_A 192 TDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDI 236 (246)
T ss_dssp TTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHH
Confidence 99999999999999888864 3578899999999887 443333
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=148.24 Aligned_cols=101 Identities=15% Similarity=0.059 Sum_probs=81.0
Q ss_pred cceEEEEccCCCccchHHH-HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQ-LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+++|||+||++++....|. .+.+.|.++||+|+++|+||+|.++ ....++++.++++.+.... +..++++
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~--------~~~~~~~l~~~i~~~~~~~-g~~~v~l 101 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITALYAGS-GNNKLPV 101 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHT-TSCCEEE
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCc--------HHHHHHHHHHHHHHHHHHh-CCCCEEE
Confidence 5679999999988764266 8899999889999999999998753 2334566666666665542 3369999
Q ss_pred EEechhhHHHHHHHHhcC---CCccEEEEeCCcC
Q 035721 137 YSESLGGAIALYITLRQK---GAWDGLILNGAMC 167 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~ 167 (308)
+||||||.++..++..++ ++|+++|++++..
T Consensus 102 VGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 102 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred EEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence 999999999999988775 7899999999864
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.6e-20 Score=154.99 Aligned_cols=134 Identities=17% Similarity=0.107 Sum_probs=108.7
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH---HH-HHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL---TA-VLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
++..+.+.||.+|++.++.|.+. .+.|+||++||++.... .+.. .+ +.|+++||.|+++|+||+|.|.+....
T Consensus 10 ~~v~i~~~DG~~L~~~~~~P~~~-~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~- 86 (587)
T 3i2k_A 10 SNVMVPMRDGVRLAVDLYRPDAD-GPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP- 86 (587)
T ss_dssp EEEEEECTTSCEEEEEEEEECCS-SCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT-
T ss_pred EEEEEECCCCCEEEEEEEECCCC-CCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc-
Confidence 45678899999999999988754 46799999999887654 2222 34 789999999999999999999876443
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc-CCCC
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM-CGIS 170 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~-~~~~ 170 (308)
+...++|+.++++++........++.++|+|+||.+++.+|.++|++++++|.+++. ....
T Consensus 87 --~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 87 --HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 148 (587)
T ss_dssp --TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred --ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccc
Confidence 345789999999999765322358999999999999999999999999999999987 5543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=150.11 Aligned_cols=140 Identities=14% Similarity=0.103 Sum_probs=104.8
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHH-----------------HHHHHHHHHcCCeE
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----------------QLTAVLFAKSGFAT 89 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----------------~~~~~~l~~~g~~v 89 (308)
.++..+...+...+|.++.+.++.|.+...+.|+||++||.+++..... ..+++.|+++||.|
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~V 167 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIA 167 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEE
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEE
Confidence 3556677788888999999999988763356899999999987644111 14788999999999
Q ss_pred EEecCCCCcCCCCccccC----CC---------------cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHH
Q 035721 90 CAIDHQGHGFSDGLVAHI----PD---------------LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYI 149 (308)
Q Consensus 90 ~~~d~~G~G~s~~~~~~~----~~---------------~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~ 149 (308)
+++|+||+|.|....... +. ....+.|+.++++++..... +..++.++|||+||.+++.+
T Consensus 168 l~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~ 247 (398)
T 3nuz_A 168 VAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVL 247 (398)
T ss_dssp EEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHH
Confidence 999999999997543110 00 11233688888888876533 45689999999999999988
Q ss_pred HHhcCCCccEEEEeCCcC
Q 035721 150 TLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 150 a~~~p~~v~~~vl~~~~~ 167 (308)
+...+ +++++|.+++..
T Consensus 248 aa~~~-~i~a~v~~~~~~ 264 (398)
T 3nuz_A 248 GTLDT-SIYAFVYNDFLC 264 (398)
T ss_dssp HHHCT-TCCEEEEESCBC
T ss_pred HhcCC-cEEEEEEecccc
Confidence 87654 799999876643
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-19 Score=143.39 Aligned_cols=128 Identities=15% Similarity=0.109 Sum_probs=83.5
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccch-------HHHHHHHHHH-HcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-------IVQLTAVLFA-KSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-------~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
..+...++.|.....+.|+|++.||....... ....++..|+ ++||.|+++|+||+|.|.+...........
T Consensus 58 ~~~~g~l~~P~~~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~ 137 (377)
T 4ezi_A 58 TIASGLVAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETL 137 (377)
T ss_dssp EEEEEEEEEESSCSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHH
T ss_pred EEEEEEEEECCCCCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhH
Confidence 45667778786543467999999998753210 0113456677 899999999999999998632221122222
Q ss_pred HHHHHHHHHHHH---HhcC--CCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCC
Q 035721 114 VEDAISFFDSFR---ARHA--PDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGI 169 (308)
Q Consensus 114 ~~d~~~~l~~~~---~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~ 169 (308)
..++.+.++... ...+ +..+++++|||+||.+++.+|...|+ .+.+++..+++..+
T Consensus 138 ~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl 203 (377)
T 4ezi_A 138 ASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGW 203 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCH
T ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCH
Confidence 233333332221 1100 23599999999999999999887653 58899988887654
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=145.91 Aligned_cols=206 Identities=16% Similarity=0.114 Sum_probs=129.1
Q ss_pred eEEEEcc--CCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC--ccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 60 VLCVVHG--FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG--LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 60 ~vv~~hG--~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
+++++|| .+++.. .|..+++.|. .++.|+++|+||+|.+.. ......+++++++++.+.++.+... .+++
T Consensus 91 ~l~~~hg~g~~~~~~-~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~----~p~~ 164 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-EFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGD----APVV 164 (319)
T ss_dssp EEEEECCCCTTCSTT-TTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTT----SCEE
T ss_pred cEEEeCCCCCCCcHH-HHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCC----CCEE
Confidence 8999998 445544 5678888886 579999999999999721 0111247888999998888776532 3899
Q ss_pred EEEechhhHHHHHHHHhc----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHH
Q 035721 136 LYSESLGGAIALYITLRQ----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (308)
++|||+||.+|+.+|.+. +++|+++|++++...... .....+...+.
T Consensus 165 l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~-----~~~~~~~~~l~------------------------ 215 (319)
T 2hfk_A 165 LLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ-----EPIEVWSRQLG------------------------ 215 (319)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC-----HHHHHTHHHHH------------------------
T ss_pred EEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch-----hHHHHHHHHhh------------------------
Confidence 999999999999999886 467999999998643211 00000000000
Q ss_pred HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHHHHHhcCCCCcEEEecCCc
Q 035721 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g 290 (308)
.....................+...... .....+++|+++++| +|..++.+. ...+.+.+. .+++++.++ +|
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~-~~~~~~~v~-g~ 288 (319)
T 2hfk_A 216 --EGLFAGELEPMSDARLLAMGRYARFLAG--PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWD-LPHTVADVP-GD 288 (319)
T ss_dssp --HHHHHTCSSCCCHHHHHHHHHHHHHHHS--CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCS-SCSEEEEES-SC
T ss_pred --HHHHHhhccccchHHHHHHHHHHHHHHh--CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCC-CCCEEEEeC-CC
Confidence 0000000000000001111111111111 124778999999999 999888765 444433332 357899999 69
Q ss_pred ccc-c-CCchhhHHHhhhc
Q 035721 291 HQL-I-GEPEENVELVFGE 307 (308)
Q Consensus 291 H~~-~-~~~~~~~~~i~~~ 307 (308)
|+. + ++++++++.|.++
T Consensus 289 H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 289 HFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp TTHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHhHHHHHHHHHHH
Confidence 996 4 8888888887664
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=139.56 Aligned_cols=202 Identities=10% Similarity=0.032 Sum_probs=120.4
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|+++||++++.. .|..+.+.|.+ ++|+++|+||+|. .++++.+.++.+.. ..+++++
T Consensus 17 ~~~l~~~hg~~~~~~-~~~~~~~~l~~--~~v~~~d~~g~~~-------------~~~~~~~~i~~~~~----~~~~~l~ 76 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGL-MYQNLSSRLPS--YKLCAFDFIEEED-------------RLDRYADLIQKLQP----EGPLTLF 76 (230)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHCTT--EEEEEECCCCSTT-------------HHHHHHHHHHHHCC----SSCEEEE
T ss_pred CCCEEEECCCCCchH-HHHHHHHhcCC--CeEEEecCCCHHH-------------HHHHHHHHHHHhCC----CCCeEEE
Confidence 578999999998876 56788888864 9999999998763 34566666666542 2389999
Q ss_pred EechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCCCCCchh-hhhHHHhhhhCCCcccccCCCCCCCcccccHHHH
Q 035721 138 SESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKFKPPWPL-EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKR 213 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (308)
|||+||.+|+.+|.+.+ ++++++|++++.............. ......... . . ... . ...+...
T Consensus 77 G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~-~~~-~-~~~~~~~ 144 (230)
T 1jmk_C 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNV-N--------R-DNE-A-LNSEAVK 144 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHH-T--------T-TCS-G-GGSHHHH
T ss_pred EECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhc-C--------h-hhh-h-hhhHHHH
Confidence 99999999999998764 6799999998754321100000000 000000000 0 0 000 0 0000000
Q ss_pred HHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcc--
Q 035721 214 KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH-- 291 (308)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH-- 291 (308)
.. +...................+++|+++++|++|..++ .....+.+... .+++++.+++ ||
T Consensus 145 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~-~~~~~~~i~g-~H~~ 208 (230)
T 1jmk_C 145 HG-------------LKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP-EWLASWEEATT-GAYRMKRGFG-THAE 208 (230)
T ss_dssp HH-------------HHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBS-SCEEEEECSS-CGGG
T ss_pred HH-------------HHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc-cccchHHHhcC-CCeEEEEecC-ChHH
Confidence 00 0000000111011112457889999999999999886 33333333332 3678999996 99
Q ss_pred ccc-CCchhhHHHhhhc
Q 035721 292 QLI-GEPEENVELVFGE 307 (308)
Q Consensus 292 ~~~-~~~~~~~~~i~~~ 307 (308)
++. ++++.+++.+.++
T Consensus 209 ~~~~~~~~~~~~~i~~~ 225 (230)
T 1jmk_C 209 MLQGETLDRNAGILLEF 225 (230)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred HcCcHhHHHHHHHHHHH
Confidence 777 7788888777654
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=154.02 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=90.7
Q ss_pred CCcceEEEEccCCCccchHHHH-HHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQL-TAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
+.+|+||++||++++....|.. +.+.|.+ .||+|+++|+||+|.|..... ..+.+.+++|+.++++++....+ +..
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~-~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQA-SQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhh-HhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999887324444 7888876 689999999999999874322 23567788999999999964332 356
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++++||||||.+|+.++.++|++++++++++|...
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 999999999999999999999999999999998644
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-19 Score=135.03 Aligned_cols=192 Identities=12% Similarity=0.050 Sum_probs=120.4
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|+++||++++.. .|..+++.|.. +++|+++|+||++ +.++++.+.++.+.. ..+++++
T Consensus 22 ~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~~v~~~d~~g~~-------------~~~~~~~~~i~~~~~----~~~~~l~ 82 (244)
T 2cb9_A 22 GKNLFCFPPISGFGI-YFKDLALQLNH-KAAVYGFHFIEED-------------SRIEQYVSRITEIQP----EGPYVLL 82 (244)
T ss_dssp SSEEEEECCTTCCGG-GGHHHHHHTTT-TSEEEEECCCCST-------------THHHHHHHHHHHHCS----SSCEEEE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHhCC-CceEEEEcCCCHH-------------HHHHHHHHHHHHhCC----CCCEEEE
Confidence 578999999998876 66888888864 6999999999863 346677777766532 2389999
Q ss_pred EechhhHHHHHHHHhc---CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 138 SESLGGAIALYITLRQ---KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
||||||.+|+.+|.+. ++++.++|++++...... . ... .. . ......+ .+....
T Consensus 83 GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~-~-~~~----------------~~---~-~~~~~~~-~~~~~~ 139 (244)
T 2cb9_A 83 GYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS-I-TAD----------------TE---N-DDSAAYL-PEAVRE 139 (244)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC-C-CCC---------------------------CCS-CHHHHH
T ss_pred EECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc-c-ccc----------------cc---H-HHHHHHh-HHHHHH
Confidence 9999999999999876 578999999998643110 0 000 00 0 0000000 111111
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC--CCcccChHHHHHHHHHhcCCCCcEEEecCCcc-
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG--DDVVCDPACVEELYKRAASKDKTLSIYPGMWH- 291 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH- 291 (308)
.+.. ... ..............+++|+++++|+ +|.+ +++....+.+.+. .+++++.+++ ||
T Consensus 140 ~~~~---------~~~----~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~-~~~~~~~i~g-gH~ 203 (244)
T 2cb9_A 140 TVMQ---------KKR----CYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAE-EGYAEYTGYG-AHK 203 (244)
T ss_dssp HHTH---------HHH----HHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBS-SCEEEEECSS-BGG
T ss_pred HHHH---------HHH----HHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhcC-CCCEEEEecC-ChH
Confidence 1100 000 0111011112456789999999999 8874 3443334443332 3689999995 99
Q ss_pred -ccc-CCchhhHHHhhhc
Q 035721 292 -QLI-GEPEENVELVFGE 307 (308)
Q Consensus 292 -~~~-~~~~~~~~~i~~~ 307 (308)
++. ++++.+++.|.++
T Consensus 204 ~~~~~~~~~~~~~~i~~~ 221 (244)
T 2cb9_A 204 DMLEGEFAEKNANIILNI 221 (244)
T ss_dssp GTTSHHHHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHHH
Confidence 666 7788888877654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-20 Score=144.41 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=78.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.+++|||+||++++.. .|..+++.|. ++|+++|+++.. ...+++++++++.+.++.+.. ..++++
T Consensus 23 ~~~~l~~~hg~~~~~~-~~~~~~~~L~---~~v~~~d~~~~~-------~~~~~~~~a~~~~~~i~~~~~----~~~~~l 87 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTRAA-------PLDSIHSLAAYYIDCIRQVQP----EGPYRV 87 (283)
T ss_dssp SSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCTTS-------CCSCHHHHHHHHHHHHTTTCC----SSCCEE
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHhcC---ceEEEEecCCCC-------CCCCHHHHHHHHHHHHHHhCC----CCCEEE
Confidence 4678999999999887 6688999885 999999997421 124788888888888776542 238999
Q ss_pred EEechhhHHHHHHHHhc---CCCcc---EEEEeCCcCC
Q 035721 137 YSESLGGAIALYITLRQ---KGAWD---GLILNGAMCG 168 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~---p~~v~---~~vl~~~~~~ 168 (308)
+||||||.+|+.+|.+. |+++. ++|++++...
T Consensus 88 ~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 88 AGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp EEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred EEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 99999999999999866 78888 9999998643
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=152.25 Aligned_cols=137 Identities=9% Similarity=0.071 Sum_probs=110.0
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-H------H---------------HHHHHHHHHcCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-I------V---------------QLTAVLFAKSGF 87 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-~------~---------------~~~~~~l~~~g~ 87 (308)
..+...+.+.||.+|+..++.|.+. .+.|+||+.||++.+... + | ...++.|+++||
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~~-~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy 118 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNKD-GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDY 118 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSSS-SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTC
T ss_pred EEEEEEEECCCCcEEEEEEEecCCC-CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCC
Confidence 4456788999999999999999764 568999999999886420 1 0 012678999999
Q ss_pred eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 88 ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 88 ~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.|+++|+||+|.|.+.... ......+|+.++++++........++.++|+|+||.+++.+|...|++++++|..++..
T Consensus 119 ~vv~~D~RG~G~S~G~~~~--~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 119 VVVKVALRGSDKSKGVLSP--WSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLN 196 (560)
T ss_dssp EEEEEECTTSTTCCSCBCT--TSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCC
T ss_pred EEEEEcCCCCCCCCCcccc--CChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcc
Confidence 9999999999999876442 12366899999999998753223589999999999999999999999999999999876
Q ss_pred CC
Q 035721 168 GI 169 (308)
Q Consensus 168 ~~ 169 (308)
..
T Consensus 197 d~ 198 (560)
T 3iii_A 197 DM 198 (560)
T ss_dssp BH
T ss_pred cc
Confidence 53
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-19 Score=151.36 Aligned_cols=140 Identities=15% Similarity=0.115 Sum_probs=108.0
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc----ch---HHH-HH--H-HHHHHcCCeEEEecCCCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES----SW---IVQ-LT--A-VLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~----~~---~~~-~~--~-~~l~~~g~~v~~~d~~G~ 97 (308)
+..+...+.+.||.+|.+.++.|.+. .+.|+||++||++... .. .|. .+ . +.|+++||.|+.+|+||+
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~ 113 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGK 113 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcC
Confidence 34466788899999999999988764 4578999999887542 10 111 12 2 788999999999999999
Q ss_pred cCCCCccccCC----Ccc----hHHHHHHHHHHHHHHh-cCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 98 GFSDGLVAHIP----DLN----PVVEDAISFFDSFRAR-HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 98 G~s~~~~~~~~----~~~----~~~~d~~~~l~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
|.|.+...... .+. ..++|+.++++++..+ .....++.++|+|+||.+++.++.+.+++++++|..++...
T Consensus 114 g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 114 YGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 193 (652)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred CCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 99987543210 012 5689999999999876 33234999999999999999999989999999999998776
Q ss_pred C
Q 035721 169 I 169 (308)
Q Consensus 169 ~ 169 (308)
.
T Consensus 194 ~ 194 (652)
T 2b9v_A 194 G 194 (652)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-18 Score=130.70 Aligned_cols=130 Identities=8% Similarity=-0.027 Sum_probs=87.2
Q ss_pred cccceeEEc-CCCcEEEEEEecCCCCCCCcceEEEEccCC--CccchHHHH---HHHHHHHcCCeEEEecCCCCc-CCCC
Q 035721 30 SHSSEYITN-SRGLRLFTQWWTPLPPAKTLGVLCVVHGFT--GESSWIVQL---TAVLFAKSGFATCAIDHQGHG-FSDG 102 (308)
Q Consensus 30 ~~~~~~~~~-~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G-~s~~ 102 (308)
..+...+.+ ..|.++.+. +.|.+ .|+||++||++ ++.. .|.. +.+.+.+.|+.|+++|.++.+ .++.
T Consensus 10 ~~~~~~~~S~~~~~~~~~~-~~P~~----~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~ 83 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVA-FLAGG----PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNW 83 (280)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS----SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBC
T ss_pred CEEEEEEECcccCCcceEE-EeCCC----CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCCC
Confidence 344455544 467888887 66653 37999999995 3333 3433 556677789999999997642 2111
Q ss_pred ccccCCCc-chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 103 LVAHIPDL-NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 103 ~~~~~~~~-~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.......+ ..+++|+..+++.. .. +..+++|+|+||||.+|+.++.++|+++++++++++...
T Consensus 84 ~~~~~~~~~~~~~~~l~~~i~~~---~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 84 EQDGSKQWDTFLSAELPDWLAAN---RGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp SSCTTCBHHHHHHTHHHHHHHHH---SCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHH---CCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 11110122 22345666666542 21 445999999999999999999999999999999998754
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=131.56 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=80.8
Q ss_pred CcceEEEEccCCCccchHHH-HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQ-LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+++|||+||++++....|. .+.+.|.++||+|+++|+||||.++ ....++++.++++.+.... +..+++
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~--------~~~~~~~la~~I~~l~~~~-g~~~v~ 134 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITTLYAGS-GNNKLP 134 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHT-TSCCEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCc--------HHHHHHHHHHHHHHHHHHh-CCCceE
Confidence 36789999999988743666 8999999999999999999999753 2334555666666555442 335999
Q ss_pred EEEechhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 136 LYSESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
|+||||||.++..++..+ +++|+++|++++...
T Consensus 135 LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 135 VLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp EEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred EEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 999999999998777765 589999999998654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=136.18 Aligned_cols=104 Identities=16% Similarity=0.112 Sum_probs=88.7
Q ss_pred CCcceEEEEccCCCccc-----hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 56 KTLGVLCVVHGFTGESS-----WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
+++++|||+||++++.. .+|..+.+.|.++||+|+++|+||+|.|..+. .+.+++++++.++++.+..+
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~---~~~~~l~~~i~~~l~~~~~~--- 79 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN---GRGEQLLAYVKTVLAATGAT--- 79 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT---SHHHHHHHHHHHHHHHHCCS---
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCCC---
Confidence 34788999999988772 36788999999999999999999999986542 35677888888888776544
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++++|||+||.++..++.++|++|+++|+++++.
T Consensus 80 --~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 80 --KVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --CEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999999853
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=142.57 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=90.1
Q ss_pred CCcceEEEEccCCCccchHHHH-HHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQL-TAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
+.+|+||++||++++....|.. +++.|.+. ||+|+++|+||+|.|..... ..+...+++|+.++++.+....+ +..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQA-SYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHh-HhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999887324555 67777664 89999999999999974322 23566788999999999964321 235
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|+||||||.+|..++.++|++|+++|+++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 999999999999999999999999999999998653
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=127.54 Aligned_cols=132 Identities=10% Similarity=0.057 Sum_probs=86.7
Q ss_pred cceeEEcC-CCcEEEEEEecCCCCCCCcceEEEEccC--CCccchHHHH---HHHHHHHcCCeEEEecCCCCc-CCCCcc
Q 035721 32 SSEYITNS-RGLRLFTQWWTPLPPAKTLGVLCVVHGF--TGESSWIVQL---TAVLFAKSGFATCAIDHQGHG-FSDGLV 104 (308)
Q Consensus 32 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~vv~~hG~--~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G-~s~~~~ 104 (308)
+...+.+. .|.++.+. +.|.. .+.|+||++||. +++.. .|.. +.+.+.+.|+.|+++|.++.. .++...
T Consensus 10 ~~~~~~S~~~~~~i~v~-~~p~~--~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~ 85 (304)
T 1sfr_A 10 EYLQVPSPSMGRDIKVQ-FQSGG--ANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQ 85 (304)
T ss_dssp EEEEEEETTTTEEEEEE-EECCS--TTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSS
T ss_pred EEEEEECccCCCceEEE-ECCCC--CCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccCC
Confidence 33444433 46677776 44432 458999999999 44544 3333 346677779999999987642 221110
Q ss_pred c-------cCCCcchH-HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 105 A-------HIPDLNPV-VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 105 ~-------~~~~~~~~-~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
. ....++++ ++++..+++..... +..+++|+|+||||.+|+.++.++|+++++++++++....
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 86 PACGKAGCQTYKWETFLTSELPGWLQANRHV--KPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (304)
T ss_dssp CEEETTEEECCBHHHHHHTHHHHHHHHHHCB--CSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHCCC--CCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 0 01234443 35666666542111 4459999999999999999999999999999999987543
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=141.79 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=90.1
Q ss_pred CCcceEEEEccCCCccchHHHH-HHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQL-TAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
+.+|+||++||++++....|.. +++.|.++ ||+|+++|++|+|.|..... ..+.+.+++|+.++++.+....+ +..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~-~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQA-VQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHH-HHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999887324444 77888764 89999999999999874322 23567788999999999964321 245
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|+||||||.+|..++.++|++|+++|+++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 999999999999999999999999999999998654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.5e-18 Score=137.92 Aligned_cols=112 Identities=12% Similarity=0.029 Sum_probs=87.7
Q ss_pred CCcceEEEEccCCCccchHHHH-HHHHHH-HcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQL-TAVLFA-KSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
..+|+||++||++++....|.. +++.|. ..+|+|+++|++|+|.|..... .++.+..++++.++++.+....+ +.+
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~-~~~~~~v~~~la~ll~~L~~~~g~~~~ 145 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQA-SQNVRIVGAEVAYLVGVLQSSFDYSPS 145 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999885324443 666663 4579999999999999863322 23566778899999998853221 345
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|+||||||.+|..++.++|++|.++++++|...
T Consensus 146 ~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 146 NVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 999999999999999999999999999999998654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.5e-18 Score=132.10 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=85.8
Q ss_pred CCcceEEEEccCCCccc----hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCC
Q 035721 56 KTLGVLCVVHGFTGESS----WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 131 (308)
+++++|||+||++++.. .+|..+.+.|.++||+|+++|+||+|.+. .+.+++++++.++++.+..+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~------~~~~~~~~~i~~~~~~~~~~---- 74 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSGQP---- 74 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHCCS----
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch------hhHHHHHHHHHHHHHHhCCC----
Confidence 34788999999987742 35678999999999999999999999874 25677788888888776444
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++++|||+||.++..++.++|++|+++|+++++.
T Consensus 75 -~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 75 -KVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -CEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 99999999999999999999999999999999853
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.9e-17 Score=129.48 Aligned_cols=110 Identities=10% Similarity=-0.009 Sum_probs=85.6
Q ss_pred CcceEEEEccCCCcc---------chHH----HHHHHHHHHcCCe---EEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGES---------SWIV----QLTAVLFAKSGFA---TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~---------~~~~----~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
.+++|||+||++++. ...| +.+++.|.++||. |+++|++|+|.|..+... ......++++.+.
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~-~~~~~~~~~l~~~ 117 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYN-YHSSTKYAIIKTF 117 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGC-CBCHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcccc-CCHHHHHHHHHHH
Confidence 467799999999852 2356 7889999999998 999999999998754311 2344555666666
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
++.+.... +..+++|+||||||.++..++.++ |++|+++|+++++..
T Consensus 118 I~~l~~~~-g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 118 IDKVKAYT-GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHH-TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHh-CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 66554432 345999999999999999999998 899999999998654
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-16 Score=122.19 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=81.8
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCC--ccchHHHH---HHHHHHHcCCeEEEecCCCCc-CCCCccc-------
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG--ESSWIVQL---TAVLFAKSGFATCAIDHQGHG-FSDGLVA------- 105 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~--~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G-~s~~~~~------- 105 (308)
..|.++.+... | .. .++||++||+++ +.. .|.. +.+.+.+.|+.|+++|.+|.. .++....
T Consensus 15 ~~~~~~~v~~~-p-~~---~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~ 88 (280)
T 1dqz_A 15 SMGRDIKVQFQ-G-GG---PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQN 88 (280)
T ss_dssp TTTEEEEEEEE-C-CS---SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCC
T ss_pred ccCceeEEEEc-C-CC---CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCcccccc
Confidence 34667776643 2 22 258999999963 444 3443 345677779999999987542 2221100
Q ss_pred cCCCcchH-HHHHHHHHHH-HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 106 HIPDLNPV-VEDAISFFDS-FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 106 ~~~~~~~~-~~d~~~~l~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
...++.++ ++++..+++. +.. +.++++|+||||||.+|+.++.++|+++++++++++....
T Consensus 89 ~~~~~~~~~~~~l~~~i~~~~~~---~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 89 YTYKWETFLTREMPAWLQANKGV---SPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp SCCBHHHHHHTHHHHHHHHHHCC---CSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred ccccHHHHHHHHHHHHHHHHcCC---CCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 11233433 4677777665 222 3358999999999999999999999999999999987553
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-17 Score=135.18 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=86.7
Q ss_pred CCcceEEEEccCCCccchHH-HHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESSWIV-QLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
+.+|+||++||++++....| ..+.+.|.++ +|+|+++|++|+|.|..... .++.+..++++.++++.+....+ +.+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~-~~~~~~~a~~l~~ll~~L~~~~g~~~~ 146 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQA-ANNVRVVGAQVAQMLSMLSANYSYSPS 146 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHH-HHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 45789999999998765234 3466666553 79999999999998753222 23567788999999998853221 345
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|+||||||.+|..++.++|+ |.++++++|...
T Consensus 147 ~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 147 QVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp GEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred hEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 99999999999999999999999 999999998654
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.9e-16 Score=125.32 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=84.8
Q ss_pred cceEEEEccCCCccchHHH--HHHHHHHHc-CCeEEEecCCCCcCCCCccc---------cCCCcchHHHHHHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQ--LTAVLFAKS-GFATCAIDHQGHGFSDGLVA---------HIPDLNPVVEDAISFFDSFR 125 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~--~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~d~~~~l~~~~ 125 (308)
..+|+++||..++...++. .+...|++. |+.|+++|+||||.|.+... ...+.++.++|+..++++++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 4458888998877653332 233444443 78999999999999975321 11257789999999999998
Q ss_pred Hhc-C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 126 ARH-A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 126 ~~~-~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+. . +..+++++||||||.+|+.++.++|++|.++|+.+++..
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 762 1 345899999999999999999999999999999886544
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-14 Score=113.28 Aligned_cols=129 Identities=14% Similarity=0.113 Sum_probs=89.1
Q ss_pred cceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccchH------HHHHHHHHHHcC----CeEEEecCCCCcC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWI------VQLTAVLFAKSG----FATCAIDHQGHGF 99 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~------~~~~~~~l~~~g----~~v~~~d~~G~G~ 99 (308)
+...+.+.+| .+.+.++.|.+- ..+.|+|+++||.+++...+ ...+++.|.++| +.|+++|.+|-
T Consensus 42 ~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~-- 118 (297)
T 1gkl_A 42 VKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG-- 118 (297)
T ss_dssp EEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--
T ss_pred EEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--
Confidence 3455666666 888999988753 24568999999988654322 245677777764 89999998752
Q ss_pred CCCccccCCCc-chHHHHHHHHHHHHHHhc----------CCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 100 SDGLVAHIPDL-NPVVEDAISFFDSFRARH----------APDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 100 s~~~~~~~~~~-~~~~~d~~~~l~~~~~~~----------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+... ..+ +.+++++...++...... .+..++.|+|+||||.+|+.++.++|+++++++++++..
T Consensus 119 ~~~~----~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 119 NCTA----QNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp TCCT----TTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred ccch----HHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2111 122 234566666666541100 023479999999999999999999999999999999854
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-17 Score=133.82 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=81.7
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCC---eEEEecCCCCcCC-----CCcc-c----------------------
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGF---ATCAIDHQGHGFS-----DGLV-A---------------------- 105 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G~s-----~~~~-~---------------------- 105 (308)
.+++|||+||++++.. .|..+++.|.++|| +|+++|++|+|.| +... +
T Consensus 21 ~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~ 99 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKIL 99 (484)
T ss_dssp CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHH
T ss_pred CCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccccc
Confidence 4678999999998887 66899999999999 7999999999976 1100 0
Q ss_pred -c--CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCC
Q 035721 106 -H--IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCG 168 (308)
Q Consensus 106 -~--~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~ 168 (308)
. ..+....++++.+.++.+.... +..+++++||||||.+++.++.++| ++|+++|++++...
T Consensus 100 ~~~~~~~~~~~~~dla~~L~~ll~~l-g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 100 SKSRERLIDETFSRLDRVIDEALAES-GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccCchhhhHHHHHHHHHHHHHHh-CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0 0012233444544554444332 3359999999999999999999997 48999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.67 E-value=6.2e-17 Score=110.82 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=77.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+.+.+|.+++|...++ +|+||++| ++.. .|..+ |.+ +|+|+++|+||+|.|...... +++++
T Consensus 5 ~~~~~~g~~~~~~~~g~------~~~vv~~H---~~~~-~~~~~---l~~-~~~v~~~d~~G~G~s~~~~~~---~~~~~ 67 (131)
T 2dst_A 5 GYLHLYGLNLVFDRVGK------GPPVLLVA---EEAS-RWPEA---LPE-GYAFYLLDLPGYGRTEGPRMA---PEELA 67 (131)
T ss_dssp EEEEETTEEEEEEEECC------SSEEEEES---SSGG-GCCSC---CCT-TSEEEEECCTTSTTCCCCCCC---HHHHH
T ss_pred EEEEECCEEEEEEEcCC------CCeEEEEc---CCHH-HHHHH---HhC-CcEEEEECCCCCCCCCCCCCC---HHHHH
Confidence 34456888999877653 46799999 3333 33444 655 499999999999999875442 77888
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG 155 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 155 (308)
+++.++++.+..+ +++++|||+||.+++.+|.++|.
T Consensus 68 ~~~~~~~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 68 HFVAGFAVMMNLG-----APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHTTCC-----SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC-----ccEEEEEChHHHHHHHHHhcCCc
Confidence 8888888877554 99999999999999999999884
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=123.21 Aligned_cols=248 Identities=12% Similarity=0.033 Sum_probs=128.8
Q ss_pred CCCcE--EEEEEecCCCCCCCcceEEEEccCCCccch--------------------HHHHHHHHH-HHcCCeEEEecCC
Q 035721 39 SRGLR--LFTQWWTPLPPAKTLGVLCVVHGFTGESSW--------------------IVQLTAVLF-AKSGFATCAIDHQ 95 (308)
Q Consensus 39 ~~g~~--l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--------------------~~~~~~~~l-~~~g~~v~~~d~~ 95 (308)
.+|.. ....++.|....++.|+|.+-||..+.... +-..+...+ .++||.|+++|++
T Consensus 85 ~~G~p~~~~gtv~~P~~~~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~ 164 (462)
T 3guu_A 85 TQNEAVADVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHE 164 (462)
T ss_dssp TTSCEEEEEEEEEECSSCCSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEEEEEEecCCCCCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCC
Confidence 34543 445556666553447999999998653210 112345666 7889999999999
Q ss_pred CCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcC----C-CccEEEEeCCcCC
Q 035721 96 GHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQK----G-AWDGLILNGAMCG 168 (308)
Q Consensus 96 G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p----~-~v~~~vl~~~~~~ 168 (308)
|+|.+... -.....++.+.++......+ ...++.++|||+||..++.++...| + .+.+++..+++..
T Consensus 165 G~G~~y~~------~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~d 238 (462)
T 3guu_A 165 GFKAAFIA------GYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVS 238 (462)
T ss_dssp TTTTCTTC------HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCB
T ss_pred CCCCcccC------CcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCC
Confidence 99964221 11112233333333222101 3469999999999999988877543 2 5889999888765
Q ss_pred CCcCC---CCCchh---hhhHHHhhhhCCCcccccCCCCCCC----------cc--cccHHHHHHHhhCCCCCCC-cc--
Q 035721 169 ISQKF---KPPWPL---EHLLFTVAWLVPTWRVVPTRGSLPM----------VS--FKEEWKRKLALSSPRRPVA-RP-- 227 (308)
Q Consensus 169 ~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~-~~-- 227 (308)
+.... ...... ...+..+....+........ .+.. .. +...........+...+.. ..
T Consensus 239 l~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~-~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ 317 (462)
T 3guu_A 239 AKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEA-RLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLL 317 (462)
T ss_dssp HHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHT-TBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGGGBSCTTGG
T ss_pred HHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHH-HhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHHHcCCCccc
Confidence 43211 001000 00111111111111100000 0000 00 0000000000000000000 00
Q ss_pred hHHHHHHHHHHHHHhhh-----hcCCCCcceEEEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 228 RAATALELLRVSRDLQG-----RFEEVEVPMLICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 228 ~~~~~~~~~~~~~~~~~-----~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
........+.. ..+.. .-..+++|+++++|.+|.++|.+.++++++.+. +.+++++.+++++|...
T Consensus 318 ~~p~~~~~l~~-~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~ 390 (462)
T 3guu_A 318 NEAPIASILKQ-ETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTA 390 (462)
T ss_dssp GSTTHHHHHHH-SBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHH
T ss_pred cCHHHHHHHHh-hcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCc
Confidence 00011111111 00100 123568999999999999999999999998874 24689999999999876
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=117.24 Aligned_cols=203 Identities=14% Similarity=0.121 Sum_probs=122.5
Q ss_pred ceeEEcC-CCcEEEEEEecCCCC--CCCcceEEEEccCCCccc-hHHHHHHHHH-HHcC---CeEEEecCCCCc------
Q 035721 33 SEYITNS-RGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS-WIVQLTAVLF-AKSG---FATCAIDHQGHG------ 98 (308)
Q Consensus 33 ~~~~~~~-~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~~~l-~~~g---~~v~~~d~~G~G------ 98 (308)
...+... .|.++.+.++.|.+- ..+.|+|+++||.+.... ..+..+...+ .+.| +.|+++|+++.+
T Consensus 20 ~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~ 99 (275)
T 2qm0_A 20 QWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEE 99 (275)
T ss_dssp EEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHH
T ss_pred EEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccc
Confidence 3445444 688999999998763 235689999999753211 0112222222 3346 999999998731
Q ss_pred ----CCCCcc------c-------cCCCcchHHHHH-HHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccE
Q 035721 99 ----FSDGLV------A-------HIPDLNPVVEDA-ISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDG 159 (308)
Q Consensus 99 ----~s~~~~------~-------~~~~~~~~~~d~-~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 159 (308)
.+.... . .....+.+.+.+ .+++..+..... +..++.++|||+||.+++.++.++|+.+++
T Consensus 100 r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~ 179 (275)
T 2qm0_A 100 RCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQN 179 (275)
T ss_dssp HHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSE
T ss_pred cccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhce
Confidence 111000 0 000001222222 233344444332 345899999999999999999999999999
Q ss_pred EEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH
Q 035721 160 LILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS 239 (308)
Q Consensus 160 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
+++++|..... .. ... ... . .+.
T Consensus 180 ~~~~s~~~~~~---------~~------~~~----------~~~-----~------------------------~~~--- 202 (275)
T 2qm0_A 180 YFISSPSIWWN---------NK------SVL----------EKE-----E------------------------NLI--- 202 (275)
T ss_dssp EEEESCCTTHH---------HH------GGG----------GGT-----T------------------------HHH---
T ss_pred eEEeCceeeeC---------hH------HHH----------HHH-----H------------------------HHH---
Confidence 99998853110 00 000 000 0 000
Q ss_pred HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHh---cCC--CCcEEEecCCccccc
Q 035721 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA---ASK--DKTLSIYPGMWHQLI 294 (308)
Q Consensus 240 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~gH~~~ 294 (308)
... .......|+++++|+.|..++.+.++++.+.+ ... ++++.++++++|+..
T Consensus 203 ~~~--~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 203 IEL--NNAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp HHH--HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred hhh--cccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 000 02345689999999999988888899999888 332 368889999999755
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-17 Score=135.43 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=81.4
Q ss_pred CCcceEEEEccCCCcc-------chHHH----HHHHHHHHcCCeEEEecCCCCcCCCCccc------------------c
Q 035721 56 KTLGVLCVVHGFTGES-------SWIVQ----LTAVLFAKSGFATCAIDHQGHGFSDGLVA------------------H 106 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~-------~~~~~----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------------------~ 106 (308)
.++++|||+||++++. ..+|. .+.+.|.++||+|+++|+||+|.|..... .
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 4578899999998742 23564 58899999999999999999998753110 1
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh--------------------------cCCCccEE
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR--------------------------QKGAWDGL 160 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~~v~~~ 160 (308)
.++++.+++|+.++++.+.. ..+++|+||||||.++..++.. +|++|.++
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~----~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~sl 205 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKP----GHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI 205 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBT----TBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEE
T ss_pred cCCHHHHHHHHHHHHHHhCC----CCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEE
Confidence 12455566666666665432 2399999999999999998876 68899999
Q ss_pred EEeCCcC
Q 035721 161 ILNGAMC 167 (308)
Q Consensus 161 vl~~~~~ 167 (308)
|+++++.
T Consensus 206 v~i~tP~ 212 (431)
T 2hih_A 206 TTIATPH 212 (431)
T ss_dssp EEESCCT
T ss_pred EEECCCC
Confidence 9999864
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.8e-14 Score=116.06 Aligned_cols=193 Identities=12% Similarity=0.025 Sum_probs=117.5
Q ss_pred CCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCCe----EEEecCCCCc-CCCCccccCCCcch
Q 035721 39 SRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFA----TCAIDHQGHG-FSDGLVAHIPDLNP 112 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~----v~~~d~~G~G-~s~~~~~~~~~~~~ 112 (308)
..|....+.+|.|.+. ..+.|+|+++||.+.........+.+.|.++|+. |+++|.+|.+ .+. ... ....
T Consensus 177 ~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~---~~~-~~~~ 252 (403)
T 3c8d_A 177 RLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAH---ELP-CNAD 252 (403)
T ss_dssp TTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHH---HSS-SCHH
T ss_pred ccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccc---cCC-ChHH
Confidence 3567888888888652 2457999999995421110113467788888775 9999998742 111 000 1111
Q ss_pred HHHHH-HHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 113 VVEDA-ISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 113 ~~~d~-~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+.+.+ .+++..+..... +..+++|+|+||||.+|+.++.++|+++++++++++........
T Consensus 253 ~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~--------------- 317 (403)
T 3c8d_A 253 FWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG--------------- 317 (403)
T ss_dssp HHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT---------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC---------------
Confidence 22221 234444444321 44689999999999999999999999999999999865322100
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
. . ..... .... .. ........|+++++|+.|..+ .+.
T Consensus 318 ----------~-~------~~~~~--------------------~~~~---~~--~~~~~~~~~i~l~~G~~D~~~-~~~ 354 (403)
T 3c8d_A 318 ----------G-Q------QEGVL--------------------LEKL---KA--GEVSAEGLRIVLEAGIREPMI-MRA 354 (403)
T ss_dssp ----------S-S------SCCHH--------------------HHHH---HT--TSSCCCSCEEEEEEESSCHHH-HHH
T ss_pred ----------C-C------cHHHH--------------------HHHH---Hh--ccccCCCceEEEEeeCCCchh-HHH
Confidence 0 0 00000 0000 00 112345679999999998654 577
Q ss_pred HHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 269 VEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 269 ~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.+.+.+.. .++++.+++| ||...
T Consensus 355 ~~~l~~~L~~~G~~v~~~~~~G-gH~~~ 381 (403)
T 3c8d_A 355 NQALYAQLHPIKESIFWRQVDG-GHDAL 381 (403)
T ss_dssp HHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred HHHHHHHHHhCCCCEEEEEeCC-CCCHH
Confidence 8888888853 3578999998 68754
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=115.84 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=71.5
Q ss_pred CcceEEEEccCCCccc------hHHH----HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH---
Q 035721 57 TLGVLCVVHGFTGESS------WIVQ----LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS--- 123 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~------~~~~----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~--- 123 (308)
++++|||+||++++.. .+|. .+++.|.++||+|+++|++|+|.|... +.++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~----------a~~l~~~i~~~~v 74 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR----------ACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH----------HHHHHHHHHCEEE
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc----------HHHHHHHHHhhhh
Confidence 4678999999987642 2455 345899889999999999999976321 1222222221
Q ss_pred -----HH-----------------HhcCCCCCEEEEEechhhHHHHHHHHh-------------------cC------CC
Q 035721 124 -----FR-----------------ARHAPDLPAFLYSESLGGAIALYITLR-------------------QK------GA 156 (308)
Q Consensus 124 -----~~-----------------~~~~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------~~ 156 (308)
+. ... +..+++||||||||.++..++.+ +| ++
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~-~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~ 153 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELK-RGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHF 153 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGG-TTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhc-CCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccc
Confidence 00 001 34599999999999999999973 35 78
Q ss_pred ccEEEEeCCcCC
Q 035721 157 WDGLILNGAMCG 168 (308)
Q Consensus 157 v~~~vl~~~~~~ 168 (308)
|+++|+++++..
T Consensus 154 V~sLV~i~tP~~ 165 (387)
T 2dsn_A 154 VLSVTTIATPHD 165 (387)
T ss_dssp EEEEEEESCCTT
T ss_pred eeEEEEECCCCC
Confidence 999999998543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.1e-13 Score=106.86 Aligned_cols=96 Identities=14% Similarity=0.188 Sum_probs=73.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.+++++|+||++++.. .|..+.+.|. +.|+++|+|+ . . ...+++++++++.+.++.+.. ..++++
T Consensus 45 ~~~~l~~~hg~~g~~~-~~~~~~~~l~---~~v~~~~~~~--~--~---~~~~~~~~a~~~~~~i~~~~~----~~~~~l 109 (316)
T 2px6_A 45 SERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTR--A--A---PLDSIHSLAAYYIDCIRQVQP----EGPYRV 109 (316)
T ss_dssp SSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCT--T--S---CTTCHHHHHHHHHHHHTTTCS----SCCCEE
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHhcC---CCEEEEECCC--C--C---CcCCHHHHHHHHHHHHHHhCC----CCCEEE
Confidence 4678999999998876 5678888773 9999999993 1 1 124788888888777665432 248999
Q ss_pred EEechhhHHHHHHHHhcC---CC---ccEEEEeCCcC
Q 035721 137 YSESLGGAIALYITLRQK---GA---WDGLILNGAMC 167 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p---~~---v~~~vl~~~~~ 167 (308)
+||||||.+|..+|.+.+ ++ +++++++++..
T Consensus 110 ~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 110 AGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp EEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred EEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 999999999999998764 45 89999988753
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=7.8e-12 Score=96.71 Aligned_cols=198 Identities=10% Similarity=0.037 Sum_probs=108.2
Q ss_pred ceeEEcCC-CcEEEEEEecCCCC--CCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCc----------
Q 035721 33 SEYITNSR-GLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHG---------- 98 (308)
Q Consensus 33 ~~~~~~~~-g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G---------- 98 (308)
...+.+.. |.++.+.++.|.+- ..+-|+|+++||...... ....+.+.|.. .+..|++++.++-.
T Consensus 15 ~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~-~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d 93 (278)
T 2gzs_A 15 ATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR-LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYD 93 (278)
T ss_dssp EEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH-CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHH
T ss_pred EEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH-HHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccc
Confidence 34454444 67888888888653 233577766677442111 11234455654 46778888886421
Q ss_pred CCCCccc-----cC---CCcchHHHHHHHHH-----HHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeC
Q 035721 99 FSDGLVA-----HI---PDLNPVVEDAISFF-----DSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNG 164 (308)
Q Consensus 99 ~s~~~~~-----~~---~~~~~~~~d~~~~l-----~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 164 (308)
.+..... .. ........+...++ ..+..... +..++.|+||||||.+|+.++.+ |+.++++++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s 172 (278)
T 2gzs_A 94 YTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSAS 172 (278)
T ss_dssp TCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEES
T ss_pred cCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeC
Confidence 1111100 00 00111123333333 22233222 34479999999999999999999 99999999999
Q ss_pred CcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhh
Q 035721 165 AMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQG 244 (308)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (308)
|...... ...... . .....
T Consensus 173 ~~~~~~~--------~~~~~~------------------------------~-----------------------~~~~~ 191 (278)
T 2gzs_A 173 PSLGRGY--------DALLSR------------------------------V-----------------------TAVEP 191 (278)
T ss_dssp GGGSTTH--------HHHHHH------------------------------H-----------------------HTSCT
T ss_pred cchhcCc--------chHHHH------------------------------H-----------------------HHhhc
Confidence 8532110 000000 0 00000
Q ss_pred hcCCCCcceEEEeeCCCcccC--------hHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 245 RFEEVEVPMLICHGGDDVVCD--------PACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 245 ~~~~i~~P~l~i~g~~D~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
. ..-..|+++.+|+.|...+ .+..+++.+.+.. -++++.+++|++|...
T Consensus 192 ~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~ 250 (278)
T 2gzs_A 192 L-QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM 250 (278)
T ss_dssp T-TTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH
T ss_pred c-CCCCCcEEEEecCccccccccchhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccch
Confidence 0 0123589999999997643 5677777777643 3578899999999754
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-10 Score=89.83 Aligned_cols=191 Identities=8% Similarity=0.012 Sum_probs=109.7
Q ss_pred CCcEEEEEEecCCCC---CCCcceEEEEccCCCccchHHHHHHHHHHH------cCCeEEEecCCCCc--CCCCcc----
Q 035721 40 RGLRLFTQWWTPLPP---AKTLGVLCVVHGFTGESSWIVQLTAVLFAK------SGFATCAIDHQGHG--FSDGLV---- 104 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~------~g~~v~~~d~~G~G--~s~~~~---- 104 (308)
-|.+..+.++.|++- ..+-|+|+++||..... ....+.+.+.. .++.|+.++..+.+ .+....
T Consensus 22 l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~--~~~~~~~~l~~~~~~~~~~~IvV~i~~~~R~~dytp~~~~~~~ 99 (331)
T 3gff_A 22 LKETREYVIALPEGYAQSLEAYPVVYLLDGEDQFD--HMASLLQFLSQGTMPQIPKVIIVGIHNTNRMRDYTPTHTLVLP 99 (331)
T ss_dssp TTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHHH--HHHHHHHHHTCSSSCSSCCCEEEEECCSSHHHHSCSSCCSBCT
T ss_pred CCCeEEEEEEeCCCCCCCCCCccEEEEecChhhhH--HHHHHHHHHHhhhhcCCCCEEEEEECCCCcccccCCCcccccc
Confidence 466788888888752 24568999999942111 11234555543 24677887652111 000000
Q ss_pred -c------c--CCCcchHHHHH-HHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC
Q 035721 105 -A------H--IPDLNPVVEDA-ISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF 173 (308)
Q Consensus 105 -~------~--~~~~~~~~~d~-~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 173 (308)
+ . ......+.+.+ .+++..+..... +. ...++||||||..++.++.++|+.+.+++.++|......
T Consensus 100 ~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~-~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~-- 176 (331)
T 3gff_A 100 SGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNG-INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDS-- 176 (331)
T ss_dssp TSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTT--
T ss_pred ccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCC-CeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCCh--
Confidence 0 0 00112222222 233344444432 22 347999999999999999999999999999998532110
Q ss_pred CCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 174 KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
. ... ... ............|+
T Consensus 177 -------------------------------~-----~~~--------------------~~~---~~~~~~~~~~~~~l 197 (331)
T 3gff_A 177 -------------------------------P-----HYL--------------------TLL---EERVVKGDFKQKQL 197 (331)
T ss_dssp -------------------------------T-----HHH--------------------HHH---HHHHHHCCCSSEEE
T ss_pred -------------------------------H-----HHH--------------------HHH---HHHhhcccCCCCeE
Confidence 0 000 000 01111112246799
Q ss_pred EEEeeCCCc-------ccChHHHHHHHHHhcC-----CCCcEEEecCCccccc
Q 035721 254 LICHGGDDV-------VCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 254 l~i~g~~D~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~ 294 (308)
++.+|+.|. .++.+.++++.+.+.. -++++.++++.+|...
T Consensus 198 ~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 198 FMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp EEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred EEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCcccc
Confidence 999999998 3556666777776642 2478899999999765
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-09 Score=84.20 Aligned_cols=131 Identities=16% Similarity=0.090 Sum_probs=79.8
Q ss_pred cCCCcEEEEEEecCCCC-------CCCcceEEEEccCCCccchHHH--HHHHHHHHcCCeEEEecCCCCcC-------CC
Q 035721 38 NSRGLRLFTQWWTPLPP-------AKTLGVLCVVHGFTGESSWIVQ--LTAVLFAKSGFATCAIDHQGHGF-------SD 101 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-------~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~G~-------s~ 101 (308)
..-|.+..+.+|.|++- .++-|+|.++||.+++...|.. .+.+.+.+.+..++.+|..-.+. +.
T Consensus 22 ~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 22 NSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 34577888888888641 2346899999999988763322 23344555688888887532111 00
Q ss_pred ---------Ccc------ccCCCc-chHHHHHHHHHHHHHHhc-----CCCCCEEEEEechhhHHHHHHHHhc--CCCcc
Q 035721 102 ---------GLV------AHIPDL-NPVVEDAISFFDSFRARH-----APDLPAFLYSESLGGAIALYITLRQ--KGAWD 158 (308)
Q Consensus 102 ---------~~~------~~~~~~-~~~~~d~~~~l~~~~~~~-----~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~ 158 (308)
... ...+.+ ..+++++..+++..-... .+.++..|.||||||.-|+.++.++ |++..
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~ 181 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYK 181 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCS
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceE
Confidence 000 000111 224556666665432110 0235789999999999999999985 67788
Q ss_pred EEEEeCCcCC
Q 035721 159 GLILNGAMCG 168 (308)
Q Consensus 159 ~~vl~~~~~~ 168 (308)
++...++...
T Consensus 182 ~~~s~s~~~~ 191 (299)
T 4fol_A 182 SCSAFAPIVN 191 (299)
T ss_dssp EEEEESCCCC
T ss_pred EEEecccccC
Confidence 8887777543
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.6e-11 Score=99.68 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=87.6
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHcC-CeEEEecCC----CCcCCCCccc--cC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKSG-FATCAIDHQ----GHGFSDGLVA--HI 107 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g-~~v~~~d~~----G~G~s~~~~~--~~ 107 (308)
+.|...+ .+|.|.....+.|+||++||.+ ++.... ......|+++| +.|+.+|+| |++.+..... ..
T Consensus 81 ~edcl~l--~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~-~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~ 157 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAADGKKRPVLFWIHGGAFLFGSGSSP-WYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYA 157 (498)
T ss_dssp BSCCCEE--EEEESCSSSCCEEEEEEECCSTTTSCCTTCG-GGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGT
T ss_pred CCCCcEE--EEEecCCCCCCCcEEEEEcCCccCCCCCCCC-cCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcccccc
Confidence 3455444 4566754335679999999987 333322 12345666665 999999999 8887654221 11
Q ss_pred CCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 108 PDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
.....-..|...+++++...- + ++.+|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 158 ~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 158 QAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 233445678888888887642 2 567999999999999998877653 457999999998654
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.4e-11 Score=98.64 Aligned_cols=122 Identities=17% Similarity=0.195 Sum_probs=81.7
Q ss_pred EEEEEecCCCCCCCcceEEEEccCC---CccchHHHHHHHHHHHc-CCeEEEecCC----CCcCCCCccccCCCcchHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFT---GESSWIVQLTAVLFAKS-GFATCAIDHQ----GHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~ 115 (308)
|+..+|.|.....+.|+||++||.+ ++.... ......|+++ |+.|+.+|+| |++.+...... .....-..
T Consensus 83 L~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~~~-~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~gl~ 160 (489)
T 1qe3_A 83 LYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEP-LYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEA-YSDNLGLL 160 (489)
T ss_dssp CEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSG-GGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTT-SCSCHHHH
T ss_pred CEEEEEeCCCCCCCCCEEEEECCCccccCCCCCc-ccCHHHHHhcCCEEEEecCccCcccccCcccccccc-CCCCcchH
Confidence 4555666754323479999999965 232212 1234556665 4999999999 55554321111 13334467
Q ss_pred HHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcC
Q 035721 116 DAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMC 167 (308)
Q Consensus 116 d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 167 (308)
|...+++++.... + ++.+|.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 161 D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 161 DQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 7778888776542 2 567899999999999988877654 56899999999865
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.9e-10 Score=88.80 Aligned_cols=127 Identities=9% Similarity=0.013 Sum_probs=77.5
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCcc-EEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccc
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWD-GLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+..+|+|.|+|+||.+++.++..+|+.++ +++++++.......... . .... . ...... .
T Consensus 9 D~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~--~--------~~~~--------~-~~~~~~-~ 68 (318)
T 2d81_A 9 NPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY--Y--------TSCM--------Y-NGYPSI-T 68 (318)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC--G--------GGGS--------T-TCCCCC-H
T ss_pred CcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH--H--------HHHh--------h-ccCCCC-C
Confidence 45699999999999999999999999999 88777653221100000 0 0000 0 000000 0
Q ss_pred cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCC----CCcE
Q 035721 209 EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASK----DKTL 283 (308)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~ 283 (308)
........... .....+.++ ..|++++||++|.+||++.++++.+.+... ++++
T Consensus 69 ~~~~~~~~~~~---------------------~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~ 127 (318)
T 2d81_A 69 TPTANMKSWSG---------------------NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSY 127 (318)
T ss_dssp HHHHHHHHHBT---------------------TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEE
T ss_pred CHHHHHHHhhc---------------------ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEE
Confidence 00000000000 001112223 359999999999999999999999988532 4688
Q ss_pred EEecCCccccc-CCc
Q 035721 284 SIYPGMWHQLI-GEP 297 (308)
Q Consensus 284 ~~~~~~gH~~~-~~~ 297 (308)
+.++++||.+. ...
T Consensus 128 ~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 128 VTTTGAVHTFPTDFN 142 (318)
T ss_dssp EEETTCCSSEEESSC
T ss_pred EEeCCCCCCCccCCc
Confidence 99999999987 543
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-09 Score=90.42 Aligned_cols=126 Identities=19% Similarity=0.150 Sum_probs=83.4
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCc---cchHHHHHHHHHHH-cCCeEEEecCC----CCcCCCCccccCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGE---SSWIVQLTAVLFAK-SGFATCAIDHQ----GHGFSDGLVAHIPD 109 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~~~~~~~ 109 (308)
+.|...+ .+|.|.....+.|+||++||.+.. .... ......|++ .|+.|+.+++| |++.+..... ..
T Consensus 89 ~edcl~l--nv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~-~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~--~~ 163 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPKPKNATVLIWIYGGGFQTGTSSLH-VYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE--AP 163 (529)
T ss_dssp CSCCCEE--EEEEESSCCSSEEEEEEECCSTTTSCCTTCG-GGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTT--SC
T ss_pred CCcCCeE--EEeeCCCCCCCCeEEEEECCCccccCCCCcc-ccChHHHhccCCeEEEEecccccccccccCCCCCC--Cc
Confidence 3444444 456665433457999999996532 2211 112345555 68999999999 4444422111 13
Q ss_pred cchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 110 LNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
...-..|...+++++...- + ++.+|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 164 ~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 164 GNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 4445678888888887642 2 677999999999999998877654 457999999998653
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=2.2e-09 Score=90.42 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=83.5
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc---chHHHHHHHHHH-HcCCeEEEecCC----CCcCCCCccccCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES---SWIVQLTAVLFA-KSGFATCAIDHQ----GHGFSDGLVAHIPD 109 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~-~~g~~v~~~d~~----G~G~s~~~~~~~~~ 109 (308)
+.|...+ .+|.|.....+.|+||++||.+... ... ......|+ +.|+.|+.+++| |+..+..... ..
T Consensus 91 sedcl~l--nv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~-~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~--~~ 165 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPRPKSTTVMVWIYGGGFYSGSSTLD-VYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQE--AP 165 (537)
T ss_dssp CSCCCEE--EEEECSSCCSSEEEEEEECCSTTTCCCTTCG-GGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSS--SC
T ss_pred CCcCCeE--EEeccCCCCCCCeEEEEECCCcccCCCCCCC-ccChHHHHhcCCEEEEEeccCccccccccCCCCCC--Cc
Confidence 3455444 4466654334579999999965322 211 12234555 669999999999 4444321111 13
Q ss_pred cchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 110 LNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
...-..|...+++++...- + ++.+|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 166 ~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 166 GNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 3445678888888887642 2 67799999999999998877764 2467999999998653
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=3e-09 Score=89.77 Aligned_cols=126 Identities=19% Similarity=0.153 Sum_probs=82.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccc--hHHHHHHHHHHH-cCCeEEEecCC----CCcCCCCccccCCC
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESS--WIVQLTAVLFAK-SGFATCAIDHQ----GHGFSDGLVAHIPD 109 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~~~~~~~ 109 (308)
+.|...+.. |.|... ..+.|+||++||.+.... .........|+. .|+.|+.+++| |++.+..... ..
T Consensus 93 ~edcl~l~v--~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~--~~ 168 (543)
T 2ha2_A 93 SEDCLYLNV--WTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE--AP 168 (543)
T ss_dssp ESCCCEEEE--EEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSS--CC
T ss_pred CCcCCeEEE--eecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCC--CC
Confidence 445555544 556442 234599999999763221 011122345554 69999999999 4444421111 13
Q ss_pred cchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcC
Q 035721 110 LNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMC 167 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 167 (308)
...-..|...+++++...- + ++.+|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 169 ~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 169 GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3445678888888887642 2 677999999999999988776643 46799999998854
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.5e-08 Score=79.07 Aligned_cols=110 Identities=14% Similarity=0.009 Sum_probs=74.9
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecC-----------CCCcCCCCccc---cCCC
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH-----------QGHGFSDGLVA---HIPD 109 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~-----------~G~G~s~~~~~---~~~~ 109 (308)
+...++.|.. ..+.|+||.+||... ....||.++.++. +|+|.-..... ....
T Consensus 125 f~~~i~lP~g-~~P~Pvii~~~~~~~------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~ga 191 (433)
T 4g4g_A 125 FSASIRKPSG-AGPFPAIIGIGGASI------------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGS 191 (433)
T ss_dssp EEEEEECCSS-SCCEEEEEEESCCCS------------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCH
T ss_pred EEEEEECCCC-CCCccEEEEECCCcc------------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHH
Confidence 4666777755 356778888886321 1356999999986 22221000000 0112
Q ss_pred cchHHHHHHHHHHHHHH----hcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 110 LNPVVEDAISFFDSFRA----RHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~----~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+..++-++..+++++.. ... +..+|.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 192 l~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 192 LTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred HHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 33345588888999987 555 7889999999999999999999886 899999887643
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.7e-08 Score=78.97 Aligned_cols=112 Identities=12% Similarity=-0.024 Sum_probs=76.5
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecC-----------CCCcCCC---CccccCC
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH-----------QGHGFSD---GLVAHIP 108 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~-----------~G~G~s~---~~~~~~~ 108 (308)
.+...++.|...+.+-|+||-+||.... ..+||.++.++. +|+|.-. +......
T Consensus 91 ~~~~~i~lP~~~~~p~Pvii~i~~~~~~------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~g 158 (375)
T 3pic_A 91 SFTVTITYPSSGTAPYPAIIGYGGGSLP------------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAG 158 (375)
T ss_dssp EEEEEEECCSSSCSSEEEEEEETTCSSC------------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCC
T ss_pred EEEEEEECCCCCCCCccEEEEECCCccc------------cCCCeEEEEecccccccccCCCCccceecccccCCccchH
Confidence 4566677776644566788888883211 246999999875 1222100 0000011
Q ss_pred CcchHHHHHHHHHHHHHHhc--C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 109 DLNPVVEDAISFFDSFRARH--A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~--~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+..++-++..+++++.... . +..+|.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 23344558889999998875 5 7889999999999999999999886 899999887643
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.4e-08 Score=83.10 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=89.7
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH-----------HHH------HcCCeEEEe
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV-----------LFA------KSGFATCAI 92 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------~l~------~~g~~v~~~ 92 (308)
.....++...++..++|..+........+|++|++||.+|.+. .+..+.+ .|. .+-..++.+
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss-~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfi 98 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYL 98 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEE
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEE
Confidence 3455677666678999987765544346899999999998877 3322211 010 123789999
Q ss_pred cC-CCCcCCCCccccC-CCcchHHHHHHHHHHHHHHhc-C-CCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEeC
Q 035721 93 DH-QGHGFSDGLVAHI-PDLNPVVEDAISFFDSFRARH-A-PDLPAFLYSESLGGAIALYITLR----QKGAWDGLILNG 164 (308)
Q Consensus 93 d~-~G~G~s~~~~~~~-~~~~~~~~d~~~~l~~~~~~~-~-~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~ 164 (308)
|. +|.|.|....... .+....++|+..++...-... . ...+++|.|+|+||..+..+|.. .+-.++++++.+
T Consensus 99 DqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign 178 (452)
T 1ivy_A 99 ESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 178 (452)
T ss_dssp CCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred ecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecC
Confidence 96 7999997432211 122345666655554443332 1 55699999999999965555543 356789999999
Q ss_pred CcCC
Q 035721 165 AMCG 168 (308)
Q Consensus 165 ~~~~ 168 (308)
+...
T Consensus 179 ~~~d 182 (452)
T 1ivy_A 179 GLSS 182 (452)
T ss_dssp CCSB
T ss_pred CccC
Confidence 8754
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=9.6e-09 Score=86.74 Aligned_cols=123 Identities=17% Similarity=0.115 Sum_probs=81.2
Q ss_pred cCCCcEEEEEEecCCCC--CCCcceEEEEccCCCc---cchHHHHHHHHHH-HcCCeEEEecCC----CCcCCCCccccC
Q 035721 38 NSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGE---SSWIVQLTAVLFA-KSGFATCAIDHQ----GHGFSDGLVAHI 107 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~----G~G~s~~~~~~~ 107 (308)
+.|...+ .+|.|... ..+.|+||++||.+.. ... +.. ..|+ ..|+.|+.+|+| |++.+....
T Consensus 95 ~edcl~l--nv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~-~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~--- 166 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKNRLPVMVWIHGGGLMVGAAST-YDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEH--- 166 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCCCEEEEEEECCSTTTSCCSTT-SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTT---
T ss_pred CCCCcEE--EEEECCCCCCCCCCCEEEEECCCcccCCCccc-cCH--HHHHhcCCEEEEecCCCCccccCCCCCccc---
Confidence 3455444 45667543 2457999999996532 221 111 1243 368999999999 444432211
Q ss_pred CCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 108 PDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
.....-..|...+++++...- + ++.+|.|+|+|.||.++..++.. .++.++++|+.++...
T Consensus 167 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 122334567888888876542 2 67799999999999999888776 3578999999988654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4e-08 Score=73.37 Aligned_cols=128 Identities=17% Similarity=0.149 Sum_probs=89.6
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH------------------HHHHcCCeEEEecC-CCCcCC
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV------------------LFAKSGFATCAIDH-QGHGFS 100 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~d~-~G~G~s 100 (308)
.|..+.|..+........+|++++++|.+|.+...+..+.+ .+.+ -..++.+|. .|.|.|
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiDqPvGtGfS 108 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK-VANVLFLDSPAGVGFS 108 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG-TSEEEEECCSTTSTTC
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccc-cCCEEEEecCCCCccC
Confidence 57799998776654445689999999999887732122211 1112 268999996 599988
Q ss_pred CCccc--c-CCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCC
Q 035721 101 DGLVA--H-IPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCG 168 (308)
Q Consensus 101 ~~~~~--~-~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~ 168 (308)
..... . ..+.++.++|+..+++..-.+.. ...++.|.|.|+||..+..+|... .-.++++++.++...
T Consensus 109 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 109 YTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp EESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred CCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 54332 1 24667778888888887665432 456899999999999887776532 235789999998655
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.1e-09 Score=87.66 Aligned_cols=106 Identities=14% Similarity=0.091 Sum_probs=74.1
Q ss_pred cceEEEEccCCC---ccchHHHHHHHHHHHcCCeEEEecCCC----CcCCCCccccCCCcchHHHHHHHHHHHHHHh---
Q 035721 58 LGVLCVVHGFTG---ESSWIVQLTAVLFAKSGFATCAIDHQG----HGFSDGLVAHIPDLNPVVEDAISFFDSFRAR--- 127 (308)
Q Consensus 58 ~~~vv~~hG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~--- 127 (308)
.|+||++||.+. +.... ......|++.|+.|+++|+|. +..+... . .....-..|...+++++...
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~-~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~-~--~~~n~gl~D~~~al~wv~~~i~~ 190 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSD-LHGPEYLVSKDVIVITFNYRLNVYGFLSLNST-S--VPGNAGLRDMVTLLKWVQRNAHF 190 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTT-TCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS-S--CCSCHHHHHHHHHHHHHHHHTGG
T ss_pred CCEEEEEcCCccccCCCccc-ccCHHHHHhCCeEEEEeCCcCCccccccCccc-C--CCCchhHHHHHHHHHHHHHHHHH
Confidence 689999999553 22211 123456677899999999994 2222111 1 12344567888888888764
Q ss_pred cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcC
Q 035721 128 HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMC 167 (308)
Q Consensus 128 ~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 167 (308)
.+ ++.+|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 191 fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 191 FGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 22 67799999999999999988765 356799999998854
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.4e-08 Score=85.36 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=78.6
Q ss_pred EEEEEecCCCC--CCCcceEEEEccCCCccc---hH-HHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchH
Q 035721 44 LFTQWWTPLPP--AKTLGVLCVVHGFTGESS---WI-VQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 44 l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~---~~-~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 113 (308)
|+..+|.|... ..+.|+||++||.+.... .+ ...++.. ...|+.|+++|+| |++.+...... ......
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~-~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~g 163 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVGALGFLASEKVRQN-GDLNAG 163 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCHHHHHCCCHHHHHS-SCTTHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHh-cCCcEEEEEecccccccccccchhcccc-CCCChh
Confidence 44455666532 245799999999764321 11 1112111 2458999999999 44443221111 134555
Q ss_pred HHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~ 168 (308)
..|..++++++...- + ++.+|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 164 l~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 788888888887642 2 677999999999998776665543 567999999988643
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.74 E-value=6.7e-08 Score=81.54 Aligned_cols=128 Identities=14% Similarity=0.057 Sum_probs=79.2
Q ss_pred cCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccch--HH--HHHH-HHHHH-cCCeEEEecCCCC--cCCCCcc-cc
Q 035721 38 NSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSW--IV--QLTA-VLFAK-SGFATCAIDHQGH--GFSDGLV-AH 106 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~--~~--~~~~-~~l~~-~g~~v~~~d~~G~--G~s~~~~-~~ 106 (308)
+.|... ..+|.|... ..+.|+||++||.+..... .+ ..++ +.++. .|+.|+.+|+|.- |.-.... ..
T Consensus 102 sedcl~--l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 179 (544)
T 1thg_A 102 NEDCLY--LNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA 179 (544)
T ss_dssp CSCCCE--EEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeE--EEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc
Confidence 344444 445666542 2457999999997643221 11 1232 22332 4799999999952 1111100 00
Q ss_pred CCCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcC
Q 035721 107 IPDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMC 167 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~ 167 (308)
......-..|..++++++...- + ++.+|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 180 ~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 180 EGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred cCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 0133345678888888887642 2 677999999999999888776642 45799999998754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.2e-08 Score=84.31 Aligned_cols=124 Identities=15% Similarity=0.043 Sum_probs=77.8
Q ss_pred EEEEEecCCCC--CCCcceEEEEccCCCccc---hH-HHHHH-HHHH-HcCCeEEEecCCCC--cCCCCcc-ccCCCcch
Q 035721 44 LFTQWWTPLPP--AKTLGVLCVVHGFTGESS---WI-VQLTA-VLFA-KSGFATCAIDHQGH--GFSDGLV-AHIPDLNP 112 (308)
Q Consensus 44 l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~---~~-~~~~~-~~l~-~~g~~v~~~d~~G~--G~s~~~~-~~~~~~~~ 112 (308)
+...+|.|... ..+.|+||++||.+.... .+ ...++ ..++ ..|+.|+.+++|.- |.-.... ........
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~ 177 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNA 177 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCch
Confidence 44555667542 245799999999764322 11 12222 2232 35899999999942 2111100 00013344
Q ss_pred HHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcC
Q 035721 113 VVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMC 167 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~ 167 (308)
...|..++++++... .+ ++.+|.|+|+|.||..+...+... +..++++|+.++..
T Consensus 178 gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 178 GLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 577888888888764 22 677999999999998777665543 45799999998753
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.68 E-value=4e-08 Score=91.77 Aligned_cols=90 Identities=13% Similarity=0.216 Sum_probs=65.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.+.++++|+.++... .+..+...|. .+.|++++.+ +.++.++...+.++.+. +..++.++
T Consensus 1058 ~~~L~~l~~~~g~~~-~y~~la~~L~--~~~v~~l~~~-------------~~~~~~~~~~~~i~~~~----~~gp~~l~ 1117 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFI-------------EEEDRLDRYADLIQKLQ----PEGPLTLF 1117 (1304)
T ss_dssp CCEEECCCCTTCBGG-GGHHHHTTCC--SCEEEECBCC-------------CSTTHHHHHHHHHHHHC----CSSCEEEE
T ss_pred CCcceeecccccchH-HHHHHHhccc--ccceEeeccc-------------CHHHHHHHHHHHHHHhC----CCCCeEEE
Confidence 567999999888776 4467777775 4889888763 34555565555555443 33489999
Q ss_pred EechhhHHHHHHHHhcC---CCccEEEEeCCcC
Q 035721 138 SESLGGAIALYITLRQK---GAWDGLILNGAMC 167 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~ 167 (308)
|||+||.+|..+|.+.. ..+..++++++..
T Consensus 1118 G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1118 GYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp EETTHHHHHHHHHHHHHHSSCCEEEEEEESCCE
T ss_pred EecCCchHHHHHHHHHHhCCCceeEEEEecCcc
Confidence 99999999999987643 4588899988754
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=6.2e-08 Score=82.31 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=76.1
Q ss_pred EEEEEecCCCC-----CCCcceEEEEccCCCccc--hHHHHHHHHHHHc-CCeEEEecCC----CCcCCCCccccCCCcc
Q 035721 44 LFTQWWTPLPP-----AKTLGVLCVVHGFTGESS--WIVQLTAVLFAKS-GFATCAIDHQ----GHGFSDGLVAHIPDLN 111 (308)
Q Consensus 44 l~~~~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-g~~v~~~d~~----G~G~s~~~~~~~~~~~ 111 (308)
|+..+|.|... ..+.|+||++||.+.... ..+. ...|+.. |+.|+++|+| |+..+... . ....
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~--~~~la~~~~~vvv~~~YRl~~~Gfl~~~~~-~--~~~n 186 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYD--GSVLASYGNVIVITVNYRLGVLGFLSTGDQ-A--AKGN 186 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSC--CHHHHHHHTCEEEEECCCCHHHHHCCCSSS-S--CCCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccC--chhhhccCCEEEEEeCCcCcccccCcCCCC-C--CCCc
Confidence 44455666532 134799999999764322 1111 1345544 6999999999 33322211 1 1234
Q ss_pred hHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCc
Q 035721 112 PVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAM 166 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~ 166 (308)
.-..|..++++++... .+ ++.+|.|+|+|.||.++..++.... ..++++|+.++.
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 4567888888888764 22 6779999999999999988876543 458899988764
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=9.9e-08 Score=81.28 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=72.9
Q ss_pred CCcceEEEEccCCCccc--hHHHHHHHHHHH-cCCeEEEecCC----CCcCCCCc----cccCCCcchHHHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESS--WIVQLTAVLFAK-SGFATCAIDHQ----GHGFSDGL----VAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~----~~~~~~~~~~~~d~~~~l~~~ 124 (308)
.+.|+||++||.+.... .........|+. .|+.|+.+++| |+...... .........-..|...+++++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv 218 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWL 218 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHH
Confidence 45799999999653221 011112344544 58999999999 44332111 111113344567888888888
Q ss_pred HHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcC
Q 035721 125 RARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMC 167 (308)
Q Consensus 125 ~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 167 (308)
...- + ++.+|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 219 ~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 219 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 7642 2 667999999999999887766543 35799999988754
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=7.6e-07 Score=73.73 Aligned_cols=110 Identities=16% Similarity=0.193 Sum_probs=80.8
Q ss_pred cceEEEEccCCCccchHHH--HHHHHHHH-cCCeEEEecCCCCcCCCCccc--------cCCCcchHHHHHHHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQ--LTAVLFAK-SGFATCAIDHQGHGFSDGLVA--------HIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~--~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~d~~~~l~~~~~ 126 (308)
.|++|++-| -+....+.. .+...+++ .|-.++.+++|-+|.|.+-.. ...+.++..+|+..+++.++.
T Consensus 43 gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~ 121 (472)
T 4ebb_A 43 GPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 121 (472)
T ss_dssp CCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHh
Confidence 455555544 334332221 12223333 378899999999999986211 123678888999999999988
Q ss_pred hcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 127 RHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 127 ~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
... ...|++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 122 ~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 122 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred hcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 754 567999999999999999999999999999999887654
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-07 Score=71.93 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=70.8
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEE-ecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCA-IDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
.+.+.++.+.. .+.+||.+||... +.+.+.+.++.+.. .|.++. .....+....+..+.+++...+
T Consensus 62 ~~~~~v~~~~~---~~~iVva~RGT~~--------~~d~l~d~~~~~~~~~~~~~~--~~vh~Gf~~~~~~~~~~~~~~~ 128 (269)
T 1tib_A 62 DVTGFLALDNT---NKLIVLSFRGSRS--------IENWIGNLNFDLKEINDICSG--CRGHDGFTSSWRSVADTLRQKV 128 (269)
T ss_dssp TEEEEEEEETT---TTEEEEEECCCSC--------THHHHTCCCCCEEECTTTSTT--CEEEHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECC---CCEEEEEEeCCCC--------HHHHHHhcCeeeeecCCCCCC--CEecHHHHHHHHHHHHHHHHHH
Confidence 34454554432 3778999999752 24456666787777 566542 1112222224556678888888
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCc
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLILNGAM 166 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~ 166 (308)
+.+..+. +..++++.||||||.+|..++..... .+..+++-+|.
T Consensus 129 ~~~~~~~-~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 129 EDAVREH-PDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHC-TTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHHHHC-CCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 8887664 55689999999999999999987653 25544444443
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.3e-07 Score=78.68 Aligned_cols=124 Identities=19% Similarity=0.101 Sum_probs=77.3
Q ss_pred cCCCcEEEEEEecCCCC---CCCcceEEEEccCCCccchHH--------HHHHHHHHH-cCCeEEEecCC----CCcCCC
Q 035721 38 NSRGLRLFTQWWTPLPP---AKTLGVLCVVHGFTGESSWIV--------QLTAVLFAK-SGFATCAIDHQ----GHGFSD 101 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~--------~~~~~~l~~-~g~~v~~~d~~----G~G~s~ 101 (308)
+.|...| .+|.|... ..+.|+||++||.+....... ......|+. .|+.|+.+++| |+..+.
T Consensus 77 sedcl~l--nv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 77 NEDCLYL--NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp CSCCCEE--EEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCEE--EEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 4455444 44555432 245799999999764322110 011234444 47999999999 443332
Q ss_pred CccccCCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCc
Q 035721 102 GLVAHIPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAM 166 (308)
Q Consensus 102 ~~~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~ 166 (308)
.. . ..-..-..|...++++++.. .+ ++.+|.|+|+|.||.++..++.. ....++++|+.++.
T Consensus 155 ~~-~--~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 155 DS-N--LPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp ST-T--CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CC-C--CCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 11 1 11122356788888887664 22 67799999999999998877654 34679999998764
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=5.2e-06 Score=63.52 Aligned_cols=140 Identities=17% Similarity=0.132 Sum_probs=95.2
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHH-----------HHH------cCCeEE
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVL-----------FAK------SGFATC 90 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-----------l~~------~g~~v~ 90 (308)
.+.....++...++..++|..+........+|+||++.|.+|.+. .+..+.+. |.. +-..++
T Consensus 20 ~~~~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS-~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~l 98 (300)
T 4az3_A 20 SFRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVL 98 (300)
T ss_dssp SSCEEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEE
T ss_pred CcceeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHhcCCCceecCCCccccccCccHHhhhcch
Confidence 344556677777888999988876655467899999999998877 33222210 000 124688
Q ss_pred EecCC-CCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcC----CCccEEEE
Q 035721 91 AIDHQ-GHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQK----GAWDGLIL 162 (308)
Q Consensus 91 ~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl 162 (308)
.+|.| |.|.|..... ...+..+.++|+..+++..-.... ...++.|.|-|+||..+-.+|...- -.++++++
T Consensus 99 fiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~i 178 (300)
T 4az3_A 99 YLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAV 178 (300)
T ss_dssp EECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEE
T ss_pred hhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCccccccee
Confidence 99966 8888765332 223456677888888776554432 5679999999999998877776432 34789888
Q ss_pred eCCcCC
Q 035721 163 NGAMCG 168 (308)
Q Consensus 163 ~~~~~~ 168 (308)
-++...
T Consensus 179 GNg~~d 184 (300)
T 4az3_A 179 GNGLSS 184 (300)
T ss_dssp ESCCSB
T ss_pred cCCccC
Confidence 888654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=5.1e-06 Score=67.29 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=91.5
Q ss_pred ccceeEEcC-CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH---H--------------HHHHcCCeEEEe
Q 035721 31 HSSEYITNS-RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA---V--------------LFAKSGFATCAI 92 (308)
Q Consensus 31 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~--------------~l~~~g~~v~~~ 92 (308)
....++... .+..+.|..+........+|++++++|.+|.+. .+..+. + .+.+ -..++-+
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sW~~-~an~lfi 93 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFALGPSSIGPDLKPIGNPYSWNS-NATVIFL 93 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHTTTTSSEEEETTTEEEECTTCGGG-GSEEECC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHh-HHHHHHccCCcEECCCCceeECCccccc-ccCEEEe
Confidence 344555544 477899877766544456899999999998876 322211 0 0112 2578899
Q ss_pred cC-CCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC--CC--CCEEEEEechhhHHHHHHHHhcC------CCccEEE
Q 035721 93 DH-QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA--PD--LPAFLYSESLGGAIALYITLRQK------GAWDGLI 161 (308)
Q Consensus 93 d~-~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~--~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~v 161 (308)
|. .|.|.|........+.++.++|+..+++..-.... .. .++.|.|.|+||..+-.+|...- -.++++.
T Consensus 94 DqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~ 173 (421)
T 1cpy_A 94 DQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVL 173 (421)
T ss_dssp CCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEE
T ss_pred cCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEE
Confidence 94 58998865433234566778899888887766543 33 69999999999998877775421 2478998
Q ss_pred EeCCcCC
Q 035721 162 LNGAMCG 168 (308)
Q Consensus 162 l~~~~~~ 168 (308)
+-++...
T Consensus 174 IGNg~~d 180 (421)
T 1cpy_A 174 IGNGLTD 180 (421)
T ss_dssp EESCCCC
T ss_pred ecCcccC
Confidence 8776554
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.28 E-value=6.8e-06 Score=68.03 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=83.4
Q ss_pred CcEEEEEEecCC--CCCCCcceEEEEccCCCccchHHHHHHH-----------------HHHHcCCeEEEecC-CCCcCC
Q 035721 41 GLRLFTQWWTPL--PPAKTLGVLCVVHGFTGESSWIVQLTAV-----------------LFAKSGFATCAIDH-QGHGFS 100 (308)
Q Consensus 41 g~~l~~~~~~~~--~~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~g~~v~~~d~-~G~G~s 100 (308)
+..+.|..+... .....+|++|+++|.+|.+. .+..+.+ .+.+ -..++.+|. .|.|.|
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sw~~-~~n~lfiDqPvGtGfS 125 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFS 125 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTC
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHh-hhhhHhhcCCeEecCCCceeecccchhh-cCCeEEEecCCCcccc
Confidence 668888877654 22346899999999998877 3322210 1112 267999996 699988
Q ss_pred CCccc---------cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc------------CCCc
Q 035721 101 DGLVA---------HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ------------KGAW 157 (308)
Q Consensus 101 ~~~~~---------~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v 157 (308)
..... ...+.++.++|+..+++..-.... ...+++|.|+|+||..+..+|... +-.+
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inL 205 (483)
T 1ac5_A 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred CCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccce
Confidence 65322 112455677888888776654432 356899999999999887666421 1347
Q ss_pred cEEEEeCCcCC
Q 035721 158 DGLILNGAMCG 168 (308)
Q Consensus 158 ~~~vl~~~~~~ 168 (308)
+++++-++...
T Consensus 206 kGi~IGNg~~d 216 (483)
T 1ac5_A 206 KALLIGNGWID 216 (483)
T ss_dssp EEEEEEEECCC
T ss_pred eeeEecCCccc
Confidence 88888777554
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.28 E-value=1e-05 Score=62.08 Aligned_cols=87 Identities=16% Similarity=0.161 Sum_probs=54.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.+..||.+||.... .+.+.+.++.+...|....|.. ..+....+..+.+++...++.+..+. +..++++
T Consensus 73 ~~~iVvafRGT~~~--------~d~~~d~~~~~~~~~~~~~~~v--h~Gf~~~~~~~~~~~~~~l~~~~~~~-p~~~i~v 141 (279)
T 1tia_A 73 NSAVVLAFRGSYSV--------RNWVADATFVHTNPGLCDGCLA--ELGFWSSWKLVRDDIIKELKEVVAQN-PNYELVV 141 (279)
T ss_pred CCEEEEEEeCcCCH--------HHHHHhCCcEeecCCCCCCCcc--ChhHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEE
Confidence 36789999997631 2334444565555454211111 11111134445667777777776554 5569999
Q ss_pred EEechhhHHHHHHHHhcC
Q 035721 137 YSESLGGAIALYITLRQK 154 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p 154 (308)
.|||+||.+|..++....
T Consensus 142 tGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 142 VGHSLGAAVATLAATDLR 159 (279)
T ss_pred EecCHHHHHHHHHHHHHH
Confidence 999999999999888754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.7e-07 Score=91.72 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=0.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++++++|+.++... .+..+.+.|. ..|+.+..+|. . ...+++++++++.+.++.+... .++.++
T Consensus 2242 ~~~Lfc~~~agG~~~-~y~~l~~~l~---~~v~~lq~pg~----~---~~~~i~~la~~~~~~i~~~~p~----gpy~L~ 2306 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSIT-VFHGLAAKLS---IPTYGLQCTGA----A---PLDSIQSLASYYIECIRQVQPE----GPYRIA 2306 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHH-HHHHHHHhhC---CcEEEEecCCC----C---CCCCHHHHHHHHHHHHHHhCCC----CCEEEE
Confidence 467899999887765 4567777773 78888888871 1 1136777777777776655432 389999
Q ss_pred EechhhHHHHHHHHhcCC---Ccc---EEEEeCC
Q 035721 138 SESLGGAIALYITLRQKG---AWD---GLILNGA 165 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~---~v~---~~vl~~~ 165 (308)
|||+||.+|..+|.+-.. .+. .++++++
T Consensus 2307 G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2307 GYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ----------------------------------
T ss_pred EECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 999999999999876432 343 6677765
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.18 E-value=4e-05 Score=57.80 Aligned_cols=129 Identities=15% Similarity=0.155 Sum_probs=81.7
Q ss_pred CCCcEEEEEEecC-CCCCCCcceEEEEccCCCccchHHHHHHH-----------HHH------HcCCeEEEecC-CCCcC
Q 035721 39 SRGLRLFTQWWTP-LPPAKTLGVLCVVHGFTGESSWIVQLTAV-----------LFA------KSGFATCAIDH-QGHGF 99 (308)
Q Consensus 39 ~~g~~l~~~~~~~-~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------~l~------~~g~~v~~~d~-~G~G~ 99 (308)
..|..+.|..+.. ......+|++++++|.+|.+...+..+.+ .|. .+-..++-+|. .|.|.
T Consensus 34 ~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGf 113 (270)
T 1gxs_A 34 NNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGF 113 (270)
T ss_dssp TTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTT
T ss_pred CCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccc
Confidence 3467899987766 33335689999999999887732222221 011 01267999995 69998
Q ss_pred CCCccc--cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHH---hc----CCCccEEEEeCCcCC
Q 035721 100 SDGLVA--HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITL---RQ----KGAWDGLILNGAMCG 168 (308)
Q Consensus 100 s~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~---~~----p~~v~~~vl~~~~~~ 168 (308)
|..... ...+..+.++|+..+++..-.... ...++.|.|.| |-++...+.. .. .-.++++++.++...
T Consensus 114 Sy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 114 SYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp CEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred cCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCccC
Confidence 864322 122344567888888876655432 55689999999 6554433222 11 134789999998655
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.99 E-value=7.5e-05 Score=57.07 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=42.6
Q ss_pred CeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 87 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
..+...+++|........+....+..+.+++...++.+..+. +..++++.||||||.+|..++...
T Consensus 92 ~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~-p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 92 LTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQY-PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred CceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHC-CCceEEEEeeCHHHHHHHHHHHHH
Confidence 667777888742111111211244556667777776665543 345699999999999999888765
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.93 E-value=4.2e-05 Score=58.39 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=33.4
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
+..+.+++...++.+..+. +..++++.|||+||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~-~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAH-PTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCeEEEeccChHHHHHHHHHHHH
Confidence 4455667777777776654 556899999999999999888765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00011 Score=54.81 Aligned_cols=105 Identities=15% Similarity=0.036 Sum_probs=67.6
Q ss_pred CcceEEEEccCCCcc--c-hHHHHHHHHHHHcCCeEEEec-CCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCC
Q 035721 57 TLGVLCVVHGFTGES--S-WIVQLTAVLFAKSGFATCAID-HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDL 132 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~--~-~~~~~~~~~l~~~g~~v~~~d-~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~ 132 (308)
++|+|++.+|.+... . .....+++.|.++ +.+-.++ +|-...+ +..+..+-++++...++....+. +..
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~~-----y~~S~~~G~~~~~~~i~~~~~~C-P~t 74 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAFP-----MWPSVEKGVAELILQIELKLDAD-PYA 74 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSSS-----CHHHHHHHHHHHHHHHHHHHHHC-TTC
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCcccC-----ccchHHHHHHHHHHHHHHHHhhC-CCC
Confidence 489999999987632 1 1235677777544 5555453 5532210 10133445666777776665553 667
Q ss_pred CEEEEEechhhHHHHHHHHh-----------cCCCccEEEEeCCcCC
Q 035721 133 PAFLYSESLGGAIALYITLR-----------QKGAWDGLILNGAMCG 168 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~-----------~p~~v~~~vl~~~~~~ 168 (308)
+++|.|+|.|+.++-.++.. ..++|.++++++-+..
T Consensus 75 kiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 75 DFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp CEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred eEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 99999999999999877654 2357889999876543
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00085 Score=47.91 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=66.2
Q ss_pred eEEEEccCCCccc--hHHHHHHHHHHH----cCCeEEEe--cCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCC
Q 035721 60 VLCVVHGFTGESS--WIVQLTAVLFAK----SGFATCAI--DHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 60 ~vv~~hG~~~~~~--~~~~~~~~~l~~----~g~~v~~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 131 (308)
.||+..|.+.... ..-..+.+.|.+ ....|..+ ++|-.-.... ....+..+-++++...++....+. +.
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~--~~~~S~~~G~~~~~~~i~~~~~~C-P~ 96 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNA--LPRGTSSAAIREMLGLFQQANTKC-PD 96 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGG--STTSSCHHHHHHHHHHHHHHHHHC-TT
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCccc--CccccHHHHHHHHHHHHHHHHHhC-CC
Confidence 4666666544321 111234444433 23667888 7875321100 011245566788888888777664 66
Q ss_pred CCEEEEEechhhHHHHHHHHhcC----CCccEEEEeCCcC
Q 035721 132 LPAFLYSESLGGAIALYITLRQK----GAWDGLILNGAMC 167 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 167 (308)
.+++|+|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 97 tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 97 ATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp CEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred CcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 79999999999999988776655 7899999988643
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0019 Score=46.28 Aligned_cols=105 Identities=12% Similarity=0.025 Sum_probs=65.3
Q ss_pred eEEEEccCCCccc---hHHHHHHHHHHHc----CCeEEEe--cCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 60 VLCVVHGFTGESS---WIVQLTAVLFAKS----GFATCAI--DHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 60 ~vv~~hG~~~~~~---~~~~~~~~~l~~~----g~~v~~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
.||+..|.+.... ..-..+.+.|..+ ...|+.+ +|+-.-..... ...+..+-+.++...++....+- +
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~--~~~S~~~G~~~~~~~i~~~~~~C-P 103 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFL--PDGTSSAAINEARRLFTLANTKC-P 103 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGS--TTSSCHHHHHHHHHHHHHHHHHC-T
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccc--cCCCHHHHHHHHHHHHHHHHHhC-C
Confidence 4666666544321 1112344444432 3568888 67743211000 01145566778888887776664 6
Q ss_pred CCCEEEEEechhhHHHHHHHHhcC----CCccEEEEeCCcC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQK----GAWDGLILNGAMC 167 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 167 (308)
..+++|.|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 104 ~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 144 (201)
T 3dcn_A 104 NAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTK 144 (201)
T ss_dssp TSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTT
T ss_pred CCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCcc
Confidence 679999999999999988776544 5789999987643
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.002 Score=46.84 Aligned_cols=107 Identities=17% Similarity=0.084 Sum_probs=64.4
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHc--CCeEEEecCCCCc-CCC-CccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKS--GFATCAIDHQGHG-FSD-GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~v~~~d~~G~G-~s~-~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.||+..|.+.... -....+.+.|.++ |-.+..++||-.. .+. ....+..+..+-++++...++....+. +..++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C-P~tki 84 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQC-PSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHS-TTCEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhC-CCCcE
Confidence 4677777654421 0113455555543 4578888988642 210 000111133445667777777766554 67799
Q ss_pred EEEEechhhHHHHHHHHh--------------cC----CCccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLR--------------QK----GAWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~--------------~p----~~v~~~vl~~~~~ 167 (308)
+|.|+|.|+.++..++.. .| ++|.++++++-+.
T Consensus 85 vl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 85 VLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCC
Confidence 999999999999877641 12 4688888887643
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0028 Score=44.85 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=62.9
Q ss_pred eEEEEccCCCccc---hHHHHHHHHHHHc---CCeEEEec--CCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCC
Q 035721 60 VLCVVHGFTGESS---WIVQLTAVLFAKS---GFATCAID--HQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 60 ~vv~~hG~~~~~~---~~~~~~~~~l~~~---g~~v~~~d--~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 131 (308)
.||+.-|.+.... ..-..+.+.|.++ ...|..++ ++-.-....... .+...-++++..+++....+. +.
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~--~s~~~g~~~~~~~i~~~~~~C-P~ 92 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALPE--GTSQAAIAEAQGLFEQAVSKC-PD 92 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHSTTCEEEEECCSSCCCCGGGGGSTT--SSCHHHHHHHHHHHHHHHHHC-TT
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcCCCceEEeeCCcccCcCccccccc--cchhHHHHHHHHHHHHHHHhC-CC
Confidence 4666666543321 1112344444432 35788888 874321000000 123344667777777665553 66
Q ss_pred CCEEEEEechhhHHHHHHHHhcC----CCccEEEEeCCcC
Q 035721 132 LPAFLYSESLGGAIALYITLRQK----GAWDGLILNGAMC 167 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 167 (308)
.+++|+|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 93 tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 93 TQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTR 132 (187)
T ss_dssp CEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCTT
T ss_pred CcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCCc
Confidence 79999999999999988776554 5789999987643
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00021 Score=49.25 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=48.6
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC----------------------CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS----------------------KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
.+++++.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+.. .+|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 57999999999999999999999888741 2678899999999999 999887666554
Q ss_pred c
Q 035721 307 E 307 (308)
Q Consensus 307 ~ 307 (308)
+
T Consensus 144 f 144 (153)
T 1whs_B 144 F 144 (153)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0026 Score=46.18 Aligned_cols=107 Identities=17% Similarity=0.068 Sum_probs=64.3
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHc--CCeEEEecCCCCc-CCC-CccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKS--GFATCAIDHQGHG-FSD-GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~v~~~d~~G~G-~s~-~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.||+..|.+.... -....+.+.|.++ |-.+..+++|-.. .+. ....+..+..+-++++...++....+. +..++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C-P~tki 84 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSC-PDTQL 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhC-CCCcE
Confidence 4677777655432 0113555666553 3468888988642 211 000111123344567777777666554 67799
Q ss_pred EEEEechhhHHHHHHHHh--------------cC----CCccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLR--------------QK----GAWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~--------------~p----~~v~~~vl~~~~~ 167 (308)
+|.|+|.|+.++..++.. .| ++|.++++++-+.
T Consensus 85 vl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 85 VLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCc
Confidence 999999999999877641 11 4688888887643
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=50.19 Aligned_cols=108 Identities=11% Similarity=0.014 Sum_probs=64.4
Q ss_pred ceEEEEccCCCccc------------hHHHHHHHHHHH----cCCeEEEecCCCCcCCC----CccccCCCcchHHHHHH
Q 035721 59 GVLCVVHGFTGESS------------WIVQLTAVLFAK----SGFATCAIDHQGHGFSD----GLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 59 ~~vv~~hG~~~~~~------------~~~~~~~~~l~~----~g~~v~~~d~~G~G~s~----~~~~~~~~~~~~~~d~~ 118 (308)
-.||+.-|.+.... .+...+.+.|.+ ....++.++|+-.-... ....+..+..+-++++.
T Consensus 41 v~vi~ARGT~E~~~~g~p~~p~~~~~g~~~~v~~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~ 120 (302)
T 3aja_A 41 VMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTV 120 (302)
T ss_dssp EEEEEECCTTSCCTTSCSSSCCSCTTCTTHHHHHHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCCCCCCCcCcccccchhHHHHHHHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHH
Confidence 34666777654431 022344455543 23557888887542210 00111113344456677
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh--------cCCCccEEEEeCCcC
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLR--------QKGAWDGLILNGAMC 167 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~ 167 (308)
..++....+. +..+++|+|+|.|+.++-.++.. .+++|.++++++-..
T Consensus 121 ~~i~~~~~~C-P~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 121 KAMTDMNDRC-PLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp HHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCTT
T ss_pred HHHHHHHhhC-CCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCCC
Confidence 7776666553 57799999999999998877642 236899999987643
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00054 Score=51.98 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGA 165 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~ 165 (308)
...+++...++.+..+. +..++.+.|||+||.+|..++.... .++. ++..++
T Consensus 106 ~~~~~~~~~l~~~~~~~-p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~ 160 (261)
T 1uwc_A 106 SVQDQVESLVKQQASQY-PDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGE 160 (261)
T ss_dssp HHHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESC
T ss_pred HHHHHHHHHHHHHHHHC-CCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecC
Confidence 34566777777776654 5568999999999999998887642 3455 444443
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0051 Score=44.46 Aligned_cols=99 Identities=18% Similarity=0.042 Sum_probs=64.3
Q ss_pred ceEEEEccCCCccc--hHHHHHHHH-HHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 59 GVLCVVHGFTGESS--WIVQLTAVL-FAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 59 ~~vv~~hG~~~~~~--~~~~~~~~~-l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
-.||+..|.+.... .....+.+. |... |-....+++|-.- .+. + .+-++++...|+....+- +..++
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~------~y~-S-~~G~~~~~~~i~~~~~~C-P~tki 79 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF------SQN-S-AAGTADIIRRINSGLAAN-PNVCY 79 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT------TCC-C-HHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC------CCc-C-HHHHHHHHHHHHHHHhhC-CCCcE
Confidence 34666677654432 122456666 6554 3355777776421 121 4 566778888887766654 67799
Q ss_pred EEEEechhhHHHHHHHHhc--C----CCccEEEEeCCc
Q 035721 135 FLYSESLGGAIALYITLRQ--K----GAWDGLILNGAM 166 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~--p----~~v~~~vl~~~~ 166 (308)
+|+|+|.|+.++-.++... + ++|.++++++-+
T Consensus 80 vl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 80 ILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred EEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 9999999999988776554 3 479999998853
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0018 Score=48.87 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
...+++...++.+..+. +..++++.|||+||.+|..++..
T Consensus 105 ~~~~~~~~~l~~~~~~~-p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 105 AVHDTIITEVKALIAKY-PDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHS-TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-CCCeEEEeccCHHHHHHHHHHHH
Confidence 34455666666665554 55699999999999999887764
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0028 Score=48.50 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEeCC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR----QKGAWDGLILNGA 165 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~ 165 (308)
...+++...++.+..+. +..++.+.|||+||.+|..++.. .+.....++..++
T Consensus 119 ~~~~~~~~~l~~~~~~~-p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~ 175 (279)
T 3uue_A 119 DLMDDIFTAVKKYKKEK-NEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGL 175 (279)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESC
T ss_pred HHHHHHHHHHHHHHHhC-CCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 34455666666555543 56699999999999999987754 3444455555554
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0014 Score=51.01 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=30.1
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
....+++...++.+.... +..++++.|||+||.+|..++..
T Consensus 116 ~~i~~~l~~~l~~~~~~~-p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 116 NEISAAATAAVAKARKAN-PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHSS-TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC-CCCceEEeecCHHHHHHHHHHHH
Confidence 334456666666666543 55689999999999999887764
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0031 Score=48.78 Aligned_cols=39 Identities=28% Similarity=0.317 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+++...++.+..+. +..++.+.|||+||.+|..++...
T Consensus 137 ~~~i~~~l~~~~~~~-p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 137 YNQIGPKLDSVIEQY-PDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCceEEEeccChHHHHHHHHHHHH
Confidence 344555555555443 556899999999999999887653
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.003 Score=43.60 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=48.1
Q ss_pred CCCcceEEEeeCCCcccChHHHHHHHHHhcC---------------------------CCCcEEEecCCccccc-CCchh
Q 035721 248 EVEVPMLICHGGDDVVCDPACVEELYKRAAS---------------------------KDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 248 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
+-.+++|+..|+.|-+++.-..+.+.+.+.- .+.++..+.+|||+.. ++|+.
T Consensus 61 ~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~ 140 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLA 140 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHH
T ss_pred HcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHH
Confidence 3467999999999999999988888887731 1346788889999999 99998
Q ss_pred hHHHhhhc
Q 035721 300 NVELVFGE 307 (308)
Q Consensus 300 ~~~~i~~~ 307 (308)
..+.+.++
T Consensus 141 al~m~~~f 148 (155)
T 4az3_B 141 AFTMFSRF 148 (155)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666554
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.44 E-value=0.017 Score=39.96 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=46.3
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC-------------------------CCCcEEEecCCccccc-CCchhhHHH
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS-------------------------KDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
.++++|..|+.|-+++.-..+.+.+.+.- .+.++..+.++||+.. .+|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 57999999999999999888888877631 1246778899999999 999876666
Q ss_pred hhhc
Q 035721 304 VFGE 307 (308)
Q Consensus 304 i~~~ 307 (308)
+..+
T Consensus 146 ~~~f 149 (158)
T 1gxs_B 146 FKQF 149 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.028 Score=44.42 Aligned_cols=22 Identities=23% Similarity=0.293 Sum_probs=19.1
Q ss_pred CCCEEEEEechhhHHHHHHHHh
Q 035721 131 DLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..++++.|||+||.+|..++..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 4589999999999999987764
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.67 E-value=0.07 Score=44.35 Aligned_cols=58 Identities=12% Similarity=0.163 Sum_probs=46.7
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhc---------C--------------------------CCCcEEEecCCccccc
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAA---------S--------------------------KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------~--------------------------~~~~~~~~~~~gH~~~ 294 (308)
.++|||.+|+.|-+|+.-..+.+.+.+. . .+.++..+.+|||+..
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999999988888877763 0 1356778899999999
Q ss_pred -CCchhhHHHhhhc
Q 035721 295 -GEPEENVELVFGE 307 (308)
Q Consensus 295 -~~~~~~~~~i~~~ 307 (308)
.+|+...+.+..+
T Consensus 452 ~dqP~~al~m~~~f 465 (483)
T 1ac5_A 452 FDKSLVSRGIVDIY 465 (483)
T ss_dssp HHCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH
Confidence 9998877666554
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=92.81 E-value=0.12 Score=42.04 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=45.8
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC-----------------------------CCCcEEEecCCccccc-CCchh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS-----------------------------KDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
.++++|.+|+.|-+++.-..+.+.+.+.- .+.++..+.++||+.. .+|+.
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 57999999999999998888887766521 1346778899999999 99988
Q ss_pred hHHHhhhc
Q 035721 300 NVELVFGE 307 (308)
Q Consensus 300 ~~~~i~~~ 307 (308)
..+.+.++
T Consensus 407 al~m~~~f 414 (421)
T 1cpy_A 407 ALSMVNEW 414 (421)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666544
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.83 E-value=0.021 Score=45.93 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=18.9
Q ss_pred CCEEEEEechhhHHHHHHHHhc
Q 035721 132 LPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.++++.|||+||.+|..++...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 3799999999999999887653
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.50 E-value=0.17 Score=41.59 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=46.7
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC---------------------------CCCcEEEecCCccccc-CCchhhH
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS---------------------------KDKTLSIYPGMWHQLI-GEPEENV 301 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~-~~~~~~~ 301 (308)
.++++|..|+.|-+|+.-..+.+.+.+.- .+.++..+.++||+.. .+|++..
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 57999999999999999999888887731 1346778899999999 9998776
Q ss_pred HHhhhc
Q 035721 302 ELVFGE 307 (308)
Q Consensus 302 ~~i~~~ 307 (308)
+.+..+
T Consensus 441 ~m~~~f 446 (452)
T 1ivy_A 441 TMFSRF 446 (452)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 308 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 6e-17 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 1e-09 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 1e-09 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 2e-09 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 5e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-07 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-07 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 6e-07 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 3e-06 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 4e-06 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 5e-06 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 9e-06 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 2e-05 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 3e-05 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 5e-05 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 8e-05 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 1e-04 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-04 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-04 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 3e-04 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 0.001 | |
| d1jkma_ | 358 | c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, | 0.001 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 0.002 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 0.002 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 0.002 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 0.002 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 0.003 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 0.003 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 77.3 bits (189), Expect = 6e-17
Identities = 28/266 (10%), Positives = 60/266 (22%), Gaps = 28/266 (10%)
Query: 34 EYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI 92
+ + G L P + + GF L A + +GF
Sbjct: 7 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGL-AEYLSTNGFHVFRY 65
Query: 93 DHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152
D H + + + + + ++ L + SL +A +
Sbjct: 66 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNI--GLIAASLSARVAYEVI-- 121
Query: 153 QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWK 212
LI + + + ++L + L G
Sbjct: 122 SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDF---EGHKLGSEVFVRDC 178
Query: 213 RKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
+ + + + VP++ +D V ++
Sbjct: 179 FEHHWDTLDSTLDKV-------------------ANTSVPLIAFTANNDDWVKQEEVYDM 219
Query: 273 YKRAASKDKTLSIYPGMWHQLIGEPE 298
+ L G H L
Sbjct: 220 LAHIRTGHCKLYSLLGSSHDLGENLV 245
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 56.1 bits (134), Expect = 1e-09
Identities = 35/260 (13%), Positives = 61/260 (23%), Gaps = 43/260 (16%)
Query: 47 QWWTPLPPAKT-LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105
+ +P + ++ G Q+ L G AT D G G
Sbjct: 119 PVYVRIPEGPGPHPAVIMLGGLESTKEESFQM-ENLVLDRGMATATFDGPGQGEMFEYKR 177
Query: 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165
D + A + SLGG AL + + G
Sbjct: 178 IAGDYEKYTSAVVDLLTKLEAIRND--AIGVLGRSLGGNYALKSAACEPRLAACISWGGF 235
Query: 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA 225
W + T + + V EE + + + R V
Sbjct: 236 SD-----------------LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVL 278
Query: 226 RPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285
++ P I HG D V + V+ + + ++ L +
Sbjct: 279 ---------------------SQIACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLVV 316
Query: 286 YPGMWHQLIGEPEENVELVF 305
H +
Sbjct: 317 EKDGDHCCHNLGIRPRLEMA 336
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 55.9 bits (133), Expect = 1e-09
Identities = 40/272 (14%), Positives = 73/272 (26%), Gaps = 15/272 (5%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
+ RG R+ P + L + G+ G + + + G+ +D
Sbjct: 59 TFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHD--WLFWPSMGYICFVMDT 116
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154
+G G V+ + F R D + Y A+
Sbjct: 117 RGQGSGWLKGDTPDYPEGPVD---PQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASF 173
Query: 155 GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214
D + A L A ++ L +
Sbjct: 174 PQVDQERIVIAGG--------SQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDT 225
Query: 215 LALSSPRRPVARPRAATALELLRVSRDLQGRF-EEVEVPMLICHGGDDVVCDPACVEELY 273
+ + R + +S F ++P L G D +C P+ V Y
Sbjct: 226 HPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAY 285
Query: 274 KRAASKDKTLSIYPGMWHQLIGEPEENVELVF 305
+ K + IYP H+ G + ++ F
Sbjct: 286 -NYYAGPKEIRIYPYNNHEGGGSFQAVEQVKF 316
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 55.2 bits (131), Expect = 2e-09
Identities = 41/295 (13%), Positives = 75/295 (25%), Gaps = 19/295 (6%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
E + L P ++ A V + R+ + P ++
Sbjct: 33 EELAKVQAEPDLQPVDYPADG-VKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGY 91
Query: 67 FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126
I + V +A G+AT + +G S+ + + +
Sbjct: 92 NASYDGEIHE--MVNWALHGYATFGMLVRGQQRSED--------TSISPHGHALGWMTKG 141
Query: 127 RHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186
D + I+ + + + G G + V
Sbjct: 142 ILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAV 201
Query: 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRF 246
A + E SP V + D+
Sbjct: 202 ADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKT-------LSYFDIMNLA 254
Query: 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENV 301
+ V+VP+L+ G D V P+ V Y K L +Y H+ I +
Sbjct: 255 DRVKVPVLMSIGLIDKVTPPSTVFAAY-NHLETKKELKVYRYFGHEYIPAFQTEK 308
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 51.0 bits (120), Expect = 5e-08
Identities = 31/248 (12%), Positives = 63/248 (25%), Gaps = 14/248 (5%)
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123
+H +WI L G A+D G + I ++ +
Sbjct: 8 IHTI-CHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSF----DEYSEPLLT 62
Query: 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183
F P L ES GG + + + ++ ++ + +
Sbjct: 63 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 122
Query: 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA------RPRAATALELLR 237
W T+ G + L + P R + + +
Sbjct: 123 VFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNIL 182
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE- 296
R + + + D + P + K + G H+L
Sbjct: 183 AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYKVEGGDHKLQLTK 240
Query: 297 PEENVELV 304
+E E++
Sbjct: 241 TKEIAEIL 248
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 50.1 bits (118), Expect = 1e-07
Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 66/313 (21%)
Query: 60 VLCVVHGFTGES-SWIVQLT----AVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP-- 112
V + HG + +WI L A + A +G+ + +G+ ++ + + PD
Sbjct: 60 VAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFW 119
Query: 113 -------VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165
D + D + D S G I + A
Sbjct: 120 AFSFDEMAKYDLPATIDFILKKTGQD-KLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYA 178
Query: 166 MCGIS--------------------------QKFKPPWPLEHLLFTVAWLVPTWRVVPTR 199
+ ++ + F P + L T T ++ +
Sbjct: 179 LAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSN 238
Query: 200 GSLPMVSFKEE------------------------WKRKLALSSPRRPVARPRAATALEL 235
+ F + S + +
Sbjct: 239 ALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMH 298
Query: 236 LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295
S ++ VP+ + +GG+D++ DP V+ L + + P H
Sbjct: 299 YHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIY-HRKIPPYNHLDFI 357
Query: 296 EPEENVELVFGEM 308
+ + V+ E+
Sbjct: 358 WAMDAPQAVYNEI 370
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 49.1 bits (115), Expect = 2e-07
Identities = 26/245 (10%), Positives = 50/245 (20%), Gaps = 16/245 (6%)
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123
VHG W L +G A+D G + + L + +S
Sbjct: 8 VHGA-CHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMES 66
Query: 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS--------QKFKP 175
A L + + A S +++
Sbjct: 67 LSADEKVILVGHSLGG----MNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNE 122
Query: 176 PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALEL 235
P E+ L T + T + + + + R ++
Sbjct: 123 RTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182
Query: 236 LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295
V + +D G H +
Sbjct: 183 DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GVTEAIEIKGADHMAML 240
Query: 296 E-PEE 299
P++
Sbjct: 241 CEPQK 245
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.6 bits (111), Expect = 6e-07
Identities = 23/276 (8%), Positives = 67/276 (24%), Gaps = 40/276 (14%)
Query: 44 LFTQWWTPLPPAK-TLGVLCVVHG--------FTGESSWIVQLTAVLFAKSGFATCAIDH 94
LF + T ++ T + +HG + + + + +S +I++
Sbjct: 16 LFNKTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEY 75
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154
+ + + + S+G I K
Sbjct: 76 RLSPEITNPRNL---------YDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALK 126
Query: 155 GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214
+ + + L ++++ L+ + L + ++ +
Sbjct: 127 DPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEE 186
Query: 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274
+ P + + M + H D + L
Sbjct: 187 PSRVMPYV--------------------KKALSRFSIDMHLVHSYSDELLTLRQTNCLIS 226
Query: 275 --RAASKDKTLSIYPGMWHQLIGEPEENVELVFGEM 308
+ L + H + + + + +F +
Sbjct: 227 CLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDNI 262
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 45.6 bits (106), Expect = 3e-06
Identities = 40/248 (16%), Positives = 71/248 (28%), Gaps = 14/248 (5%)
Query: 64 VHGFTGESSWIVQLTAVL--FAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121
+HG + + F +G+ D G SD +V
Sbjct: 36 LHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM 95
Query: 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
D+ A + + A AL L LIL G F P
Sbjct: 96 DALDIDRAHLVGNAMGG-----ATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGI 150
Query: 182 LLFTVAWLVPTW----RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR 237
L + P++ +++ + +E + + + + +A +
Sbjct: 151 KLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPL 210
Query: 238 VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE- 296
+ D+ R E++ I G DD +L D L ++ H E
Sbjct: 211 STWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI--DDARLHVFSKCGHWAQWEH 268
Query: 297 PEENVELV 304
+E LV
Sbjct: 269 ADEFNRLV 276
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 45.6 bits (107), Expect = 4e-06
Identities = 16/107 (14%), Positives = 24/107 (22%), Gaps = 13/107 (12%)
Query: 64 VHGFTGESSWIVQL-----TAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
VHG G + + G + G DG L V+ +
Sbjct: 14 VHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVL 73
Query: 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165
L S GG + Y+ + G
Sbjct: 74 --------AATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 44.9 bits (104), Expect = 5e-06
Identities = 44/279 (15%), Positives = 81/279 (29%), Gaps = 18/279 (6%)
Query: 35 YIT----NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATC 90
+IT NS + L+ + P + ++HGF S + + +G+
Sbjct: 2 FITVGQENSTSIDLYYEDHGTGQP------VVLIHGF-PLSGHSWERQSAALLDAGYRVI 54
Query: 91 AIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYIT 150
D +G G S D + ++ + A + + + ++ Y T
Sbjct: 55 TYDRRGFGQSSQPTTGYDYDTF-AADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGT 113
Query: 151 LRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210
R L + P E VA + T + E
Sbjct: 114 ARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDEN 173
Query: 211 WKRKLA----LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266
+++ +S + A A D + ++VP LI HG D
Sbjct: 174 LGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPI 233
Query: 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGE-PEENVELV 304
++ +A G H L+ EE +
Sbjct: 234 ENTARVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTAL 271
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 44.1 bits (102), Expect = 9e-06
Identities = 45/273 (16%), Positives = 79/273 (28%), Gaps = 14/273 (5%)
Query: 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96
T G +++ + W P + HG+ ++ + + A G+ A D +G
Sbjct: 4 TTRDGTQIYYKDWGSGQP------IVFSHGW-PLNADSWESQMIFLAAQGYRVIAHDRRG 56
Query: 97 HGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156
HG S + + +D + R A + I + T R A
Sbjct: 57 HGRSSQPWSGNDM-DTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKA 115
Query: 157 WDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK-- 214
+ M A L ++ S P F + +
Sbjct: 116 GLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSA 175
Query: 215 --LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272
+ + A + A D ++++VP L+ HG D V
Sbjct: 176 GMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIA 235
Query: 273 YKRAASKDKTLSIYPGMWHQLIGE-PEENVELV 304
K TL IY G H L ++ +
Sbjct: 236 SAA-LVKGSTLKIYSGAPHGLTDTHKDQLNADL 267
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 42.9 bits (99), Expect = 2e-05
Identities = 36/240 (15%), Positives = 71/240 (29%), Gaps = 27/240 (11%)
Query: 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118
VL + HGFTG +S V++ G+ A ++GHG + H + +
Sbjct: 13 AVLLL-HGFTG-NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMN 70
Query: 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178
+ ++ + SLGG +L + P
Sbjct: 71 GYEFL---KNKGYEKIAVAGLSLGGVFSLK----------------------LGYTVPIE 105
Query: 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV 238
+ ++ + K E K + + + T L +
Sbjct: 106 GIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQEL 165
Query: 239 SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298
D++ + + P + D + +P +Y S K + Y H + + E
Sbjct: 166 IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQE 225
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.0 bits (97), Expect = 3e-05
Identities = 34/155 (21%), Positives = 49/155 (31%), Gaps = 7/155 (4%)
Query: 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSG 86
SV I +G LF + P VL +HG S +W T A++G
Sbjct: 3 SVEQREGTIQ-VQGQALFFREALPGSGQARFSVLL-LHGIRFSSETWQNLGTLHRLAQAG 60
Query: 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIA 146
+ AID G G S P+ E A F + P + S SL G +
Sbjct: 61 YRAVAIDLPGLGHSK----EAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYS 116
Query: 147 LYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181
L G + +C ++
Sbjct: 117 LPFLTAPGSQLPGFVPVAPICTDKINAANYASVKT 151
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 42.1 bits (97), Expect = 5e-05
Identities = 26/243 (10%), Positives = 51/243 (20%), Gaps = 25/243 (10%)
Query: 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT-------AVLFAKSGFATCAIDHQG 96
++ ++ P + + ++HG + + T F + G++T ID G
Sbjct: 46 MYVRYQIPQRAKRY--PITLIHGC-CLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSG 102
Query: 97 HGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156
G S V+ + S A A G Q
Sbjct: 103 RGRSATD----ISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQ--- 155
Query: 157 WDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLA 216
+ + + P V
Sbjct: 156 FPVQAQAELWQQMVPDWLGSMPT-------PNPTVANLSKLAIKLDGTVLLSHSQSGIYP 208
Query: 217 LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA 276
+ A ++E + +P+L+ G A
Sbjct: 209 FQTAAMNPKGITAIVSVEPGECPKPED-VKPLTSIPVLVVFGDHIEEFPRWAPRLKACHA 267
Query: 277 ASK 279
Sbjct: 268 FID 270
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 41.0 bits (94), Expect = 8e-05
Identities = 42/295 (14%), Positives = 69/295 (23%), Gaps = 29/295 (9%)
Query: 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI 92
SE I S + L++ + P L +V G + A A G
Sbjct: 1 SERIVPSGDVELWSDDFGD-PADPAL---LLVMGGNLSALGWPDEFARRLADGGLHVIRY 56
Query: 93 DHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152
DH+ G S A + L + +
Sbjct: 57 DHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHD 116
Query: 153 QKGAWDGLILNGAMC----GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208
+ + L+ G I + + L+ L + ++
Sbjct: 117 RLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVA 176
Query: 209 EEWKRKLALSSPRRPVARPRAATALELLR------------------VSRDLQGRFEEVE 250
+ + LS P A E EV
Sbjct: 177 KRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVT 236
Query: 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE-PEENVELV 304
VP L+ D + + L L+ PGM H L E++
Sbjct: 237 VPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGHALPSSVHGPLAEVI 289
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 41.1 bits (95), Expect = 1e-04
Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 15/221 (6%)
Query: 82 FAKSGFATCAIDHQGHGFSDGL-----VAHIPDLNPVVE------DAISFFDSFRARHAP 130
F GFA+ + G SDG I + V++ A + A
Sbjct: 132 FLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 191
Query: 131 --DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188
+ + +S G +A + ++ + ++ +
Sbjct: 192 WANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGE 251
Query: 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE 248
+ + +L F + + ++ + L ++
Sbjct: 252 DLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLI-NTDK 310
Query: 249 VEVPMLICHGGDDVVCDPACVEELYKR-AASKDKTLSIYPG 288
V+ +LI HG D P +K K ++ G
Sbjct: 311 VKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRG 351
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 40.2 bits (92), Expect = 1e-04
Identities = 43/246 (17%), Positives = 75/246 (30%), Gaps = 20/246 (8%)
Query: 64 VHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123
+HG+ G ++ + + + F +D G G S G A +
Sbjct: 17 LHGW-GLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGALSL-----------ADMA 63
Query: 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183
A SLGG +A I L L+ + S + + P +L
Sbjct: 64 EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVL 123
Query: 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR--- 240
+ + L + + E R+ A + + +A P + +
Sbjct: 124 AGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT 183
Query: 241 -DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE-PE 298
DL+ + V +P L +G D + V L K I+ H P
Sbjct: 184 VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW--PHSESYIFAKAAHAPFISHPA 241
Query: 299 ENVELV 304
E L+
Sbjct: 242 EFCHLL 247
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 39.8 bits (91), Expect = 2e-04
Identities = 30/139 (21%), Positives = 43/139 (30%), Gaps = 7/139 (5%)
Query: 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA 225
M ++ L AW V V+ E+ LA +
Sbjct: 175 MSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234
Query: 226 RPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285
+E + L+ ++P +I HG DVVC +L+K L I
Sbjct: 235 VNGGFFEVE----DQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQI 288
Query: 286 YPGMWHQLIGEPEENVELV 304
P H EPE LV
Sbjct: 289 SPASGH-SAFEPENVDALV 306
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 39.4 bits (90), Expect = 3e-04
Identities = 31/164 (18%), Positives = 43/164 (26%), Gaps = 9/164 (5%)
Query: 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH 97
+ L L P +L +HG G I+ L +A+ GF A D H
Sbjct: 4 RTERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILAL-LPGYAERGFLLLAFDAPRH 62
Query: 98 GFSDGLVAHIPDLNPVVEDAISFFDSFRA--------RHAPDLPAFLYSESLGGAIALYI 149
G +G V E LP FL SLG +A +
Sbjct: 63 GEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLL 122
Query: 150 TLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193
L G+ + +L T
Sbjct: 123 LAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATR 166
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 38.0 bits (86), Expect = 0.001
Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 39/304 (12%)
Query: 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATC 90
+ S ++ G R++ + P K V +HG G I LF +
Sbjct: 11 YDSGWLDTGDGHRIYWELSGN-PNGKPA-VF--IHGGPG--GGISPHHRQLFDPERYKVL 64
Query: 91 AIDHQGH-GFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP-----------AFLYS 138
D +G +V D + A +
Sbjct: 65 LFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHP 124
Query: 139 ESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPT 198
E + + I +K +GA +K++ + + + + +
Sbjct: 125 ERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTS 184
Query: 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRA------------------ATALELLRVSR 240
+ + W + P + L +
Sbjct: 185 ADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQ 244
Query: 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEEN 300
L+ +P +I HG D+ C +L K + L I G H EP
Sbjct: 245 LLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSY-DEPGIL 301
Query: 301 VELV 304
+L+
Sbjct: 302 HQLM 305
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Score = 37.9 bits (86), Expect = 0.001
Identities = 40/291 (13%), Positives = 80/291 (27%), Gaps = 25/291 (8%)
Query: 7 AEANEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHG 66
+ Q+++ S+ D R V S+E I G + + P L L HG
Sbjct: 55 SHDGFQAVYDSIALDLPTDRDDVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHG 114
Query: 67 ----FTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
+ + + A +G +D + ++G + + + +
Sbjct: 115 GGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDE 174
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
+ + S AIA + +++G D + A L
Sbjct: 175 HRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRL 234
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL 242
+ + + G +V + P+A P A+
Sbjct: 235 TELPSLVENDGYFIENGGMALLVRAYDPTGEH-----AEDPIAWPYFASE---------- 279
Query: 243 QGRFEEVEVPMLICHGGDDVVCDPACVEELYKR--AASKDKTLSIYPGMWH 291
P ++ D + D +R A D + G+ H
Sbjct: 280 --DELRGLPPFVVAVNELDPLRDEG--IAFARRLARAGVDVAARVNIGLVH 326
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 37.2 bits (84), Expect = 0.002
Identities = 40/274 (14%), Positives = 72/274 (26%), Gaps = 10/274 (3%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94
+T S G +F + W P + V HG+ S+ + F G+ A D
Sbjct: 2 TVTTSDGTNIFYKDWGP-RDGLPV-VF--HHGW-PLSADDWDNQMLFFLSHGYRVIAHDR 56
Query: 95 QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP---AFLYSESLGGAIALYITL 151
+GHG SD + A + + A +
Sbjct: 57 RGHGRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAK 116
Query: 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211
+ ++ + + V
Sbjct: 117 AVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVS 176
Query: 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271
+ + + + A D + ++VP+L+ HG DD V A
Sbjct: 177 QGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAP 236
Query: 272 LYKRAASKDKTLSIYPGMWHQLIGE-PEENVELV 304
+ TL Y G+ H ++ PE +
Sbjct: 237 KSAELL-ANATLKSYEGLPHGMLSTHPEVLNPDL 269
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 37.2 bits (84), Expect = 0.002
Identities = 37/285 (12%), Positives = 68/285 (23%), Gaps = 28/285 (9%)
Query: 35 YIT----NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATC 90
YIT NS + L+ + P + ++HG+ + G+
Sbjct: 2 YITVGNENSTPIELYYEDQGSGQP------VVLIHGY-PLDGHSWERQTRELLAQGYRVI 54
Query: 91 AIDHQGHGFSDGLVAH----------IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES 140
D +G G S + L + + Y
Sbjct: 55 TYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHE 114
Query: 141 LGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200
+A +L G + + + + + + + G
Sbjct: 115 RVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLG 174
Query: 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260
S S+P A A + R P LI HG
Sbjct: 175 SRISEQAVTGSWNVAIGSAPVAAYAVVPAW-----IEDFRSDVEAVRAAGKPTLILHGTK 229
Query: 261 DVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGE-PEENVELV 304
D + + +A + G H L+ +E +
Sbjct: 230 DNILPIDATARRFHQAV-PEADYVEVEGAPHGLLWTHADEVNAAL 273
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 37.0 bits (85), Expect = 0.002
Identities = 16/118 (13%), Positives = 31/118 (26%), Gaps = 11/118 (9%)
Query: 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTG-ESSWIVQLTAVLFAKSGFATCAIDHQGHGFS 100
L P + + +L +V G L + G+ C I +
Sbjct: 16 LDAGLTCQGASPSSVSKPIL-LVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN 74
Query: 101 DGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWD 158
D E ++ + A + + + S GG +A +
Sbjct: 75 --------DTQVNTEYMVNAITALYAGSGNN-KLPVLTWSQGGLVAQWGLTFFPSIRS 123
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 37.1 bits (85), Expect = 0.002
Identities = 12/105 (11%), Positives = 22/105 (20%), Gaps = 19/105 (18%)
Query: 64 VHGFTGESS------WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117
HG G + W +A + G + S+ + ++
Sbjct: 13 AHGMLGFDNILGVDYWFGIPSA--LRRDGAQVYVTEVSQLDTSEVRGEQL------LQQV 64
Query: 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLIL 162
L S GG Y+ +
Sbjct: 65 EEIVALSGQPK-----VNLIGHSHGGPTIRYVAAVRPDLIASATS 104
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 36.7 bits (83), Expect = 0.003
Identities = 37/260 (14%), Positives = 71/260 (27%), Gaps = 21/260 (8%)
Query: 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL---TAVLFAKSGFATCA 91
+ G+RL + P + VL V + + + + F + G+A
Sbjct: 9 MVPMRDGVRLAVDLYRP-DADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVI 67
Query: 92 IDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151
D +G S+G DA + D ++ S G +
Sbjct: 68 QDTRGLFASEG---EFVPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAV 124
Query: 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211
G + + ++ PW +V L+ ++ T
Sbjct: 125 SGVGGLKAIA---PSMASADLYRAPWYGPGGALSVEALLGWSALIGTGLITSRSD----- 176
Query: 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271
+ P + A L + + + E+ + LI D VV P E
Sbjct: 177 ------ARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDES 230
Query: 272 LYKRAASKDKTLSIYPGMWH 291
+ + P +
Sbjct: 231 WQSISLFERLGGLATPALIT 250
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.2 bits (82), Expect = 0.003
Identities = 23/202 (11%), Positives = 49/202 (24%), Gaps = 12/202 (5%)
Query: 64 VHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122
VHG S S+ L + G +D S + + E +
Sbjct: 8 VHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE--QVQGFREAVVPIM- 64
Query: 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182
L S GG + + ++ + + Q +
Sbjct: 65 -----AKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLF 119
Query: 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL 242
++ + P + ++ + + +A +
Sbjct: 120 PTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHP---NATVW 176
Query: 243 QGRFEEVEVPMLICHGGDDVVC 264
+ F V +LI D V+
Sbjct: 177 RKNFLRVGHLVLIGGPDDGVIT 198
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 308 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.96 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.95 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.95 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.93 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.92 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.92 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.91 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.91 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.9 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.9 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.89 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.89 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.88 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.88 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.87 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.87 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.87 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.86 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.85 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.85 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.85 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.85 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.83 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.83 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.81 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.8 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.8 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.79 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.78 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.78 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.77 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.77 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.74 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.72 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.72 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.72 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.7 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.68 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.67 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.61 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.59 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.57 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.55 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.48 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.35 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.35 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.34 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.33 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.3 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.29 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.26 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.08 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.03 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.01 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.91 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.55 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.52 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.49 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.49 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.42 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.41 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.3 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.29 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.26 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.17 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.94 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.86 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 97.77 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 97.04 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.98 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.91 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.9 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.9 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.82 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 96.79 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=4.2e-37 Score=240.48 Aligned_cols=256 Identities=18% Similarity=0.129 Sum_probs=170.4
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc--ccCCCcch
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV--AHIPDLNP 112 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~ 112 (308)
.+...+|.+|+|..+|+++ +|+|||+||++++...|...+.+.|.++||+|+++|+||||.|+... ...+++++
T Consensus 3 ~~~~~g~~~i~y~~~G~~~----~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 78 (297)
T d1q0ra_ 3 RIVPSGDVELWSDDFGDPA----DPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78 (297)
T ss_dssp EEEEETTEEEEEEEESCTT----SCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred eEEEECCEEEEEEEecCCC----CCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccch
Confidence 4557788999999998643 68899999999887744466888898899999999999999997643 23358999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC--------------CCCch
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF--------------KPPWP 178 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--------------~~~~~ 178 (308)
+++|+..++++++.+ +++++||||||.+++.+|.++|++|+++|++++........ .....
T Consensus 79 ~~~d~~~ll~~l~~~-----~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (297)
T d1q0ra_ 79 LAADAVAVLDGWGVD-----RAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 153 (297)
T ss_dssp HHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred hhhhhcccccccccc-----ceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhh
Confidence 999999999998776 99999999999999999999999999999998754322100 00000
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchH-HHHHHHHHH-----------------HH
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRA-ATALELLRV-----------------SR 240 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------~~ 240 (308)
............... ............................. ......... ..
T Consensus 154 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (297)
T d1q0ra_ 154 QQPFLDALALMNQPA-------EGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPP 226 (297)
T ss_dssp CHHHHHHHHHHHSCC-------CSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCG
T ss_pred hHHHHHHHHHhcccc-------chhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccc
Confidence 000000000000000 00000000000000000000000000000 000000000 01
Q ss_pred HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 241 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+....++++++|+++|+|++|.+++++.++.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 227 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l 293 (297)
T d1q0ra_ 227 SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGHALPSSVHGPLAEVILAHT 293 (297)
T ss_dssp GGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCSSCCGGGHHHHHHHHHHHH
T ss_pred cchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCcchhhCHHHHHHHHHHHH
Confidence 233457789999999999999999999999999888 7899999999999999 99999999998763
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=4.4e-37 Score=239.60 Aligned_cols=265 Identities=15% Similarity=0.059 Sum_probs=175.5
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+++++..++ +.+|.+|+|..+++++ +|+|||+||++++.. .|+.+++.|++ ||+|+++|+||||.|+.+...
T Consensus 4 ~~p~~~~~i-~~~g~~i~y~~~G~~~----~p~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~~- 75 (291)
T d1bn7a_ 4 GFPFDPHYV-EVLGERMHYVDVGPRD----GTPVLFLHGNPTSSY-LWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLD- 75 (291)
T ss_dssp CCCCCCEEE-EETTEEEEEEEESCSS----SSCEEEECCTTCCGG-GGTTTHHHHTT-TSCEEEECCTTSTTSCCCSCC-
T ss_pred CCCCCCeEE-EECCEEEEEEEeCCCC----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEEeCCCCccccccccc-
Confidence 456666555 5689999999998654 578999999998877 56788999965 799999999999999875443
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
++.+++++|+.++++.++.+ +++++||||||.+++.++.++|+++++++++++......................
T Consensus 76 ~~~~~~~~~l~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (291)
T d1bn7a_ 76 YFFDDHVRYLDAFIEALGLE-----EVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFR 150 (291)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-----SEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHT
T ss_pred cchhHHHHHHhhhhhhhccc-----cccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHh
Confidence 68999999999999988766 9999999999999999999999999999998876543322211111111111000
Q ss_pred ------hhCC-CcccccCC-CCCCCcccccHHHHHHHhhCCCCCCCcch-HHHH---------HHHHHHHHHhhhhcCCC
Q 035721 188 ------WLVP-TWRVVPTR-GSLPMVSFKEEWKRKLALSSPRRPVARPR-AATA---------LELLRVSRDLQGRFEEV 249 (308)
Q Consensus 188 ------~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~i 249 (308)
.... ........ .......... .................. .... .............+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (291)
T d1bn7a_ 151 TADVGRELIIDQNAFIEGVLPKCVVRPLTE-VEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQS 229 (291)
T ss_dssp STTHHHHHHTTSCHHHHTHHHHTCSSCCCH-HHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hhhhHHHhhhhhhhhHHhhhhhhccccchH-HHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcC
Confidence 0000 00000000 0000000000 000111100000000000 0000 00111112333446678
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|+++++|++|.+++++.++.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 230 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL 287 (291)
T d1bn7a_ 230 PVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 287 (291)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCGGGTCHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 999999999999999999999999998 6899999999999999 99999999998875
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=5.8e-37 Score=236.92 Aligned_cols=257 Identities=20% Similarity=0.211 Sum_probs=168.9
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.||.+|+|..+++++ .|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++.++++
T Consensus 2 ~i~~~dG~~l~y~~~G~~~----~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~-~~~~~~~ 75 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD----GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTG-HDMDTYA 75 (275)
T ss_dssp EEECTTSCEEEEEEESCTT----SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHH
T ss_pred EEEecCCCEEEEEEecCCC----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccc-ccccccc
Confidence 6889999999999999765 468999999998887 668889999899999999999999999875543 6899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEech-hhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC--CchhhhhHHHh-hh--
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESL-GGAIALYITLRQKGAWDGLILNGAMCGISQKFKP--PWPLEHLLFTV-AW-- 188 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~-Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~-~~-- 188 (308)
+|+.++++.++.+ +++++|||+ ||.++..+|.++|++|+++|++++.......... ........... ..
T Consensus 76 ~~~~~~l~~l~~~-----~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T d1a88a_ 76 ADVAALTEALDLR-----GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALA 150 (275)
T ss_dssp HHHHHHHHHHTCC-----SEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred ccccccccccccc-----ccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhh
Confidence 9999999998766 889999886 6667778899999999999999876443221111 11111110000 00
Q ss_pred -----hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCCC
Q 035721 189 -----LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 189 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
................................. ............. ..+..+.++++++|+++++|++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D 226 (275)
T d1a88a_ 151 ANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM----MGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred hhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhc----ccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCC
Confidence 000000000000000000000000000000000 0001111111111 12233456778999999999999
Q ss_pred cccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 262 VVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++|.+.. +.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 273 (275)
T d1a88a_ 227 QVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273 (275)
T ss_dssp SSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 99987654 5555666 6899999999999999 99999999998864
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-37 Score=227.39 Aligned_cols=197 Identities=21% Similarity=0.221 Sum_probs=156.5
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH--HHHHHHHcCCeEEEecCCCCcCCCCccc-c
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL--TAVLFAKSGFATCAIDHQGHGFSDGLVA-H 106 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~ 106 (308)
+.++.++ ..+|.+++|+.++|..+ +.+++|||+||++++.. .|+. .++.|+++||+|+++|+||||.|+.... .
T Consensus 5 ~~~e~~i-~v~G~~i~y~~~~~~~~-~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~ 81 (208)
T d1imja_ 5 EQREGTI-QVQGQALFFREALPGSG-QARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 81 (208)
T ss_dssp EECCCCE-EETTEEECEEEEECSSS-CCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred CceEEEE-EECCEEEEEEEecCCCC-CCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc
Confidence 3344455 46999999999988765 56889999999998876 5554 4688999999999999999999987543 2
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.++.....+++.++++.+... +++++||||||.+++.++.++|++++++|+++|.....
T Consensus 82 ~~~~~~~~~~l~~~~~~l~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~---------------- 140 (208)
T d1imja_ 82 PIGELAPGSFLAAVVDALELG-----PPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------- 140 (208)
T ss_dssp CTTSCCCTHHHHHHHHHHTCC-----SCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------
T ss_pred ccchhhhhhhhhhcccccccc-----cccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc----------------
Confidence 235556677888888887766 99999999999999999999999999999998742100
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
...+.+.++++|+|+|+|++|.++|.
T Consensus 141 ------------------------------------------------------~~~~~~~~i~~P~Lii~G~~D~~~~~ 166 (208)
T d1imja_ 141 ------------------------------------------------------INAANYASVKTPALIVYGDQDPMGQT 166 (208)
T ss_dssp ------------------------------------------------------SCHHHHHTCCSCEEEEEETTCHHHHH
T ss_pred ------------------------------------------------------cccccccccccccccccCCcCcCCcH
Confidence 00123457889999999999998875
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+. +..+.+ +++++.+++++||..+ ++|+++.+.+.+++
T Consensus 167 ~~--~~~~~~--~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl 205 (208)
T d1imja_ 167 SF--EHLKQL--PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 205 (208)
T ss_dssp HH--HHHTTS--SSEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred HH--HHHHhC--CCCeEEEECCCCCchhhhCHHHHHHHHHHHH
Confidence 42 334444 6899999999999998 99999999988764
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=3.7e-38 Score=243.26 Aligned_cols=248 Identities=17% Similarity=0.125 Sum_probs=170.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH--HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI--VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
+.....+.+|.+++|..+|. +|+|||+||++++...+ |..+.+.|+ +||+|+++|+||||.|+.+.....+
T Consensus 3 ~~~~~i~~~G~~~~Y~~~G~------G~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (271)
T d1uk8a_ 3 EIGKSILAAGVLTNYHDVGE------GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYS 75 (271)
T ss_dssp TCCEEEEETTEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCC
T ss_pred CCCCEEEECCEEEEEEEEee------CCeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCcccccccccc
Confidence 44567789999999998873 35799999998765522 556778885 4899999999999999887665567
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC-------Cchhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHL 182 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-------~~~~~~~ 182 (308)
.+++++++..+++.++.+ +++++||||||.+++.+|.++|++++++|++++.......... .......
T Consensus 76 ~~~~~~~~~~~~~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T d1uk8a_ 76 KDSWVDHIIGIMDALEIE-----KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENM 150 (271)
T ss_dssp HHHHHHHHHHHHHHTTCC-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHH
T ss_pred ccccchhhhhhhhhhcCC-----CceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHH
Confidence 788889999998888766 9999999999999999999999999999999886543211100 0000000
Q ss_pred HHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCC--------CCCCcchHHHHHHHHHHHHHhhhhcCCCCcceE
Q 035721 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPR--------RPVARPRAATALELLRVSRDLQGRFEEVEVPML 254 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 254 (308)
......... ................... ........ ..........+.+.++++|++
T Consensus 151 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~i~~P~l 215 (271)
T d1uk8a_ 151 RNLLDIFAY-----------DRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQ----RWIDALASSDEDIKTLPNETL 215 (271)
T ss_dssp HHHHHHHCS-----------CGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTH----HHHHHHCCCHHHHTTCCSCEE
T ss_pred HHHHHHHhh-----------hcccchhHHHHHHHhhhhchhHHHHHHhhcchhhh----hhhhhccccHHHHHhhcccee
Confidence 000000000 0001111111100000000 00000000 111111233455788999999
Q ss_pred EEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 255 ICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 255 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|++|.++|++..+.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 216 ii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl 268 (271)
T d1uk8a_ 216 IIHGREDQVVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 268 (271)
T ss_dssp EEEETTCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred EEecCCCCCcCHHHHHHHHHhC--CCCEEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 9999999999999999999998 6899999999999999 99999999998764
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-36 Score=239.73 Aligned_cols=255 Identities=15% Similarity=0.112 Sum_probs=172.6
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPD 109 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~ 109 (308)
....++.+.||.+|+|..+|. +|+|||+||+++++. .|+.+++.|+++||+|+++|+||||.|..+.. ..++
T Consensus 11 ~~~~~v~~~~g~~i~y~~~G~------gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 83 (322)
T d1zd3a2 11 MSHGYVTVKPRVRLHFVELGS------GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 83 (322)
T ss_dssp SEEEEEEEETTEEEEEEEECC------SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGS
T ss_pred CceeEEEECCCCEEEEEEEcC------CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEecccccccccccccccccc
Confidence 455677888999999998862 468999999998887 66889999999999999999999999987533 3357
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc------------
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW------------ 177 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~------------ 177 (308)
.+++++++.+++++++.+ +++++|||+||.+++.+|.++|++++++|++++............
T Consensus 84 ~~~~~~~i~~l~~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 84 MEVLCKEMVTFLDKLGLS-----QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp HHHHHHHHHHHHHHHTCS-----CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred ccccchhhhhhhhccccc-----ccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhH
Confidence 889999999999998776 999999999999999999999999999999987544322111000
Q ss_pred -------hhhh-----hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCC--------CCCCCcchHHHHHHH--
Q 035721 178 -------PLEH-----LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSP--------RRPVARPRAATALEL-- 235 (308)
Q Consensus 178 -------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-- 235 (308)
.... ....+........ ................. ...............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASD---------ESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFK 229 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTT---------SCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccc---------hhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHh
Confidence 0000 0000111100000 00000000000000000 000000000000000
Q ss_pred --------------H-HHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 236 --------------L-RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 236 --------------~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
. ....+......++++|+++++|++|.+++++..+.+.+.+ +++++++++++||+++ ++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~ 307 (322)
T d1zd3a2 230 KSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKPTE 307 (322)
T ss_dssp HHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHSHHH
T ss_pred hcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHHH
Confidence 0 0112334556789999999999999999999988888777 6899999999999999 99999
Q ss_pred hHHHhhhcC
Q 035721 300 NVELVFGEM 308 (308)
Q Consensus 300 ~~~~i~~~i 308 (308)
+++.|.++|
T Consensus 308 v~~~i~~FL 316 (322)
T d1zd3a2 308 VNQILIKWL 316 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=5.2e-36 Score=235.73 Aligned_cols=268 Identities=14% Similarity=0.051 Sum_probs=173.3
Q ss_pred cccccceeEE---cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYIT---NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~---~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
+.+++..++. ..||.+++|..+|++++ .|+|||+||+++++. .|..+...|.+.||+|+++|+||||.|+.+.
T Consensus 17 ~~p~~~~~~~~~~~~~g~~~~y~~~G~~~~---~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~ 92 (310)
T d1b6ga_ 17 QYPFSPNYLDDLPGYPGLRAHYLDEGNSDA---EDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92 (310)
T ss_dssp SCCCCCEEEESCTTCTTCEEEEEEEECTTC---SCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEES
T ss_pred CCCCCCceeccccCCCCEEEEEEEecCCCC---CCEEEEECCCCCchH-HHHHHHHHhhccCceEEEeeecCcccccccc
Confidence 3444444443 45899999999988765 789999999998887 6678899999999999999999999998643
Q ss_pred -ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh---
Q 035721 105 -AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE--- 180 (308)
Q Consensus 105 -~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~--- 180 (308)
...++++.+++|+.++++++..+ +++++||||||.+++.+|.++|++|+++|++++.......... ....
T Consensus 93 ~~~~~~~~~~~~~l~~~l~~l~~~-----~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~-~~~~~~~ 166 (310)
T d1b6ga_ 93 DEEDYTFEFHRNFLLALIERLDLR-----NITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQP-AFSAFVT 166 (310)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCC-----SEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCT-HHHHTTT
T ss_pred ccccccccccccchhhhhhhcccc-----ccccccceecccccccchhhhccccceEEEEcCccCCCcccch-hHHHHhh
Confidence 34468999999999999998777 9999999999999999999999999999999886543221110 0000
Q ss_pred ----hhHHH-hhhhCCC-cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH---------HHHHHhhhh
Q 035721 181 ----HLLFT-VAWLVPT-WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL---------RVSRDLQGR 245 (308)
Q Consensus 181 ----~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 245 (308)
..... ....... ........... .... ......+.................... .........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T d1b6ga_ 167 QPADGFTAWKYDLVTPSDLRLDQFMKRWA-PTLT-EAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFW 244 (310)
T ss_dssp SSTTTHHHHHHHHHSCSSCCHHHHHHHHS-TTCC-HHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhccchhhhhhhhhhccC-cccc-HHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHh
Confidence 00000 0000000 00000000000 0000 011111111110000000000000000 001112223
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..++++|+++++|++|.+++++..+.+.+.+++ ..++++++++||+++ ++|+.+++.|.+++
T Consensus 245 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl 307 (310)
T d1b6ga_ 245 QNDWNGQTFMAIGMKDKLLGPDVMYPMKALING-CPEPLEIADAGHFVQEFGEQVAREALKHFA 307 (310)
T ss_dssp HHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTT-CCCCEEETTCCSCGGGGHHHHHHHHHHHHH
T ss_pred hcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CccEEEECCCcCchhhhCHHHHHHHHHHHH
Confidence 457899999999999999999999999888842 247889999999999 88888888877653
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=5e-37 Score=238.91 Aligned_cols=255 Identities=18% Similarity=0.237 Sum_probs=164.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
+...||.+|+|..++.+++ +|+||++||+++++..++. ....+.++||+|+++|+||||.|+.+....++++.+++
T Consensus 6 ~~~~~g~~i~y~~~g~~~~---~~~iv~lHG~~g~~~~~~~-~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 81 (290)
T d1mtza_ 6 YAKVNGIYIYYKLCKAPEE---KAKLMTMHGGPGMSHDYLL-SLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVE 81 (290)
T ss_dssp EEEETTEEEEEEEECCSSC---SEEEEEECCTTTCCSGGGG-GGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHH
T ss_pred eEEECCEEEEEEEcCCCCC---CCeEEEECCCCCchHHHHH-HHHHHHHCCCEEEEEeCCCCccccccccccccccchhh
Confidence 4467999999999987554 7899999999877764554 44556677899999999999999876655578999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc--
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW-- 193 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (308)
|+.++++++... .+++++||||||.+|+.+|.++|++|+++|++++........ ..............
T Consensus 82 ~l~~ll~~l~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 151 (290)
T d1mtza_ 82 EAEALRSKLFGN----EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV------KEMNRLIDELPAKYRD 151 (290)
T ss_dssp HHHHHHHHHHTT----CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH------HHHHHHHHTSCHHHHH
T ss_pred hhhhhhcccccc----cccceecccccchhhhhhhhcChhhheeeeecccccCcccch------hhhhhhhhhhhHHHHH
Confidence 999999988532 299999999999999999999999999999998864321100 00000000000000
Q ss_pred ---ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHH------HHHH--------------HHhhhhcCCCC
Q 035721 194 ---RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALEL------LRVS--------------RDLQGRFEEVE 250 (308)
Q Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--------------~~~~~~~~~i~ 250 (308)
...... ................................... .... .+....+++++
T Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (290)
T d1mtza_ 152 AIKKYGSSG-SYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIK 230 (290)
T ss_dssp HHHHHHHHT-CTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCC
T ss_pred HHHHhhhhc-cccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhccc
Confidence 000000 00000000000000000000000000000000000 0000 11234466789
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++++|++|.++ ++.++.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 231 ~P~l~i~G~~D~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL 286 (290)
T d1mtza_ 231 IPTLITVGEYDEVT-PNVARVIHEKI--AGSELHVFRDCSHLTMWEDREGYNKLLSDFI 286 (290)
T ss_dssp SCEEEEEETTCSSC-HHHHHHHHHHS--TTCEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCC-HHHHHHHHHHC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 99999999999876 46788888888 6899999999999999 99999999887764
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2e-35 Score=228.21 Aligned_cols=253 Identities=17% Similarity=0.222 Sum_probs=165.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.||.+|+|..+|. .|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++..+++
T Consensus 2 ~~~t~dG~~l~y~~~G~------g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~ 73 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQ------GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDG-YDFDTFA 73 (274)
T ss_dssp EEECTTSCEEEEEEECS------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHH
T ss_pred eEECcCCCEEEEEEECC------CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccc-ccchhhH
Confidence 57889999999999863 356999999998887 668889999889999999999999999876544 5888999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCC--CCchhhhhHHHhh----
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFK--PPWPLEHLLFTVA---- 187 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~---- 187 (308)
+|+.++++.+..+ +++++|||+||.+++.++.+ .|++|++++++++......... .............
T Consensus 74 ~dl~~~l~~l~~~-----~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (274)
T d1a8qa_ 74 DDLNDLLTDLDLR-----DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVL 148 (274)
T ss_dssp HHHHHHHHHTTCC-----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh-----hhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhh
Confidence 9999999988766 99999999999998887655 5889999999987654332211 1111111000000
Q ss_pred ----hhCCCc-ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCC
Q 035721 188 ----WLVPTW-RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 188 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
...... ...... .................... ............. ..+..+.++++++|+++++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~ 222 (274)
T d1a8qa_ 149 TERSQFWKDTAEGFFSA-NRPGNKVTQGNKDAFWYMAM-----AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDD 222 (274)
T ss_dssp HHHHHHHHHHHHHHTTT-TSTTCCCCHHHHHHHHHHHT-----TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred hhhHHHhhhhhhhhhhc-cccchhhhhhHHHHHHHhhh-----ccchhhhhhHHHHhhccchHHHHHhccceeeeeccCC
Confidence 000000 000000 00111111111111100000 0011111111111 1233456789999999999999
Q ss_pred CcccChHHH-HHHHHHhcCCCCcEEEecCCccccc---CCchhhHHHhhhcC
Q 035721 261 DVVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI---GEPEENVELVFGEM 308 (308)
Q Consensus 261 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~i~~~i 308 (308)
|.+++.+.. +.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 223 D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL 272 (274)
T d1a8qa_ 223 DQVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272 (274)
T ss_dssp CSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHhC--CCCEEEEECCCCCcccccccCHHHHHHHHHHHH
Confidence 999998764 5566666 6899999999999876 45888988888764
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.6e-37 Score=238.07 Aligned_cols=245 Identities=15% Similarity=0.125 Sum_probs=164.0
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP 112 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 112 (308)
.+.+.||.+++|...|. .|+|||+||++++.. ..|..+.+.|++ ||+|+++|+||||.|+.+... .+.++
T Consensus 5 ~~~~~dg~~l~y~~~G~------g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~ 76 (268)
T d1j1ia_ 5 RFVNAGGVETRYLEAGK------GQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIE-YTQDR 76 (268)
T ss_dssp EEEEETTEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSSC-CCHHH
T ss_pred eEEEECCEEEEEEEEcC------CCeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCccc-ccccc
Confidence 34457999999998763 356999999987654 246678888854 799999999999999875544 57888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC-------chhhhhHHH
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP-------WPLEHLLFT 185 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-------~~~~~~~~~ 185 (308)
+++|+.++++.+... .+++++|||+||.+++.+|.++|++|+++|++++........... .........
T Consensus 77 ~~~~~~~~i~~l~~~----~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (268)
T d1j1ia_ 77 RIRHLHDFIKAMNFD----GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHL 152 (268)
T ss_dssp HHHHHHHHHHHSCCS----SCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHH
T ss_pred ccccchhhHHHhhhc----ccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHH
Confidence 999999999887653 289999999999999999999999999999999864432211100 000000001
Q ss_pred hhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH------HhhhhcCCCCcceEEEeeC
Q 035721 186 VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR------DLQGRFEEVEVPMLICHGG 259 (308)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~P~l~i~g~ 259 (308)
........ .. ............... ............... ...+.+.++++|+++|+|+
T Consensus 153 ~~~~~~~~--------~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~ 217 (268)
T d1j1ia_ 153 VKALTNDG--------FK---IDDAMINSRYTYATD----EATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 217 (268)
T ss_dssp HHHHSCTT--------CC---CCHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHHHhhhh--------hh---hhhhhhHHHHHhhhh----hhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeC
Confidence 11111000 00 000000000000000 000000001111000 1123467899999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 260 DDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|.++|++.++.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 218 ~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL 265 (268)
T d1j1ia_ 218 DDKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265 (268)
T ss_dssp TCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 99999999999999998 6899999999999999 99999999998864
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=8.8e-37 Score=236.82 Aligned_cols=251 Identities=16% Similarity=0.088 Sum_probs=162.9
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC--
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP-- 108 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-- 108 (308)
+..+ ..++.+++|...|+++ +|+|||+||++++.. ..|+.+++.|++ ||+|+++|+||||.|+.......
T Consensus 6 ~~~~-~~~~~~~h~~~~G~~~----~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 79 (281)
T d1c4xa_ 6 EKRF-PSGTLASHALVAGDPQ----SPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHI 79 (281)
T ss_dssp EEEE-CCTTSCEEEEEESCTT----SCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSH
T ss_pred EEEE-ccCCEEEEEEEEecCC----CCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccc
Confidence 3344 4566899999887653 689999999987654 246778888965 79999999999999987544321
Q ss_pred --CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 109 --DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 109 --~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
+.++.++|+.++++.+..+ +++++||||||.+++.+|.++|++|+++|++++......... ..........
T Consensus 80 ~~~~~~~~~~i~~~i~~~~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~--~~~~~~~~~~ 152 (281)
T d1c4xa_ 80 MSWVGMRVEQILGLMNHFGIE-----KSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARP--PELARLLAFY 152 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCC--HHHHHHHTGG
T ss_pred hhhHHHhhhhccccccccccc-----cceeccccccccccccccccccccccceEEeccccCccccch--hHHHHHHHhh
Confidence 3455677777777777655 999999999999999999999999999999998644322111 1111111000
Q ss_pred h--------hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH-HHHHH-------HHhhhhcCCCC
Q 035721 187 A--------WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE-LLRVS-------RDLQGRFEEVE 250 (308)
Q Consensus 187 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~i~ 250 (308)
. .....+.... ................... ........ ..... ......+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 222 (281)
T d1c4xa_ 153 ADPRLTPYRELIHSFVYDP---ENFPGMEEIVKSRFEVAND-------PEVRRIQEVMFESMKAGMESLVIPPATLGRLP 222 (281)
T ss_dssp GSCCHHHHHHHHHTTSSCS---TTCTTHHHHHHHHHHHHHC-------HHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCC
T ss_pred hhcccchhhhhhhhhcccc---cccchhhhHHHHHhhhccc-------chhhhhhhhhhhHHhhhhhhhccchhhhhhhc
Confidence 0 0000000000 0000000000000000000 00000000 00000 01123467889
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++++|++|.++|++..+.+.+.+ +++++++++++||+++ ++|+++++.+.++|
T Consensus 223 ~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 279 (281)
T d1c4xa_ 223 HDVLVFHGRQDRIVPLDTSLYLTKHL--KHAELVVLDRCGHWAQLERWDAMGPMLMEHF 279 (281)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHC--SSEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred cceEEEEeCCCCCcCHHHHHHHHHHC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHh
Confidence 99999999999999999999999988 6899999999999999 99999999998874
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.4e-35 Score=228.79 Aligned_cols=256 Identities=18% Similarity=0.184 Sum_probs=167.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++++.||.+|+|..+|. .|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++.++++
T Consensus 2 ~f~~~dG~~i~y~~~G~------g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~ 73 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGS------GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG-NDMDTYA 73 (273)
T ss_dssp EEECTTSCEEEEEEESC------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHH
T ss_pred EEEeeCCcEEEEEEECC------CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCcccccccc-ccccchH
Confidence 67889999999998863 356999999999887 668899999889999999999999999876554 6899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHH-HHHhcCCCccEEEEeCCcCCCCcCCC--CCchhhhhHH-H-----
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALY-ITLRQKGAWDGLILNGAMCGISQKFK--PPWPLEHLLF-T----- 185 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~-~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~-~----- 185 (308)
+|+.++++.++.. +.+++|||+||.++.. ++..+|+++.+++++++......... .......... .
T Consensus 74 ~~~~~~l~~l~~~-----~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T d1a8sa_ 74 DDLAQLIEHLDLR-----DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASL 148 (273)
T ss_dssp HHHHHHHHHTTCC-----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcc-----ceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHH
Confidence 9999999988765 8899999998865554 56667999999999987654322211 1111111100 0
Q ss_pred --hhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCC
Q 035721 186 --VAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.................................... .............. .+..+.++++++|+++++|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D 224 (273)
T d1a8sa_ 149 ADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM----AAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDAD 224 (273)
T ss_dssp HHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH----HSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTC
T ss_pred HHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhc----ccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCC
Confidence 000000000000000000000000111100000000 00011111111111 2234557789999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.++|.+..+.+.+.+. +++++++++++||+++ ++|+++++.|.++|
T Consensus 225 ~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 271 (273)
T d1a8sa_ 225 QVVPIEASGIASAALV-KGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271 (273)
T ss_dssp SSSCSTTTHHHHHHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHc
Confidence 9999888777766653 5789999999999999 99999999998874
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.3e-35 Score=226.60 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=161.0
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
..+.++.+|+|...|. .|+|||+||++++.. .|+.+++.|.++||+|+++|+||||.|+..... ++++++++
T Consensus 7 ~~~~~~v~i~y~~~G~------G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 78 (277)
T d1brta_ 7 QENSTSIDLYYEDHGT------GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTG-YDYDTFAA 78 (277)
T ss_dssp EETTEEEEEEEEEECS------SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred cCcCCcEEEEEEEEcc------CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCcccccccc-cchhhhhh
Confidence 3344567888988763 457999999998887 668889999989999999999999999875544 68999999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhh-HHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC---CchhhhhHHHhhhhCC
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGG-AIALYITLRQKGAWDGLILNGAMCGISQKFKP---PWPLEHLLFTVAWLVP 191 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 191 (308)
|+.++++.++.+ +++++|||||| .++..++..+|++|+++|++++.......... ................
T Consensus 79 dl~~~l~~l~~~-----~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T d1brta_ 79 DLNTVLETLDLQ-----DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 153 (277)
T ss_dssp HHHHHHHHHTCC-----SEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH
T ss_pred hhhhhhhccCcc-----cccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhh
Confidence 999999999776 99999999996 55666788889999999999876543321111 1111111110000000
Q ss_pred CcccccCCCCCCCcccccHHHHHH--HhhCCCCCCCcchHHHHHH------HHHH-------HHHhhhhcCCCCcceEEE
Q 035721 192 TWRVVPTRGSLPMVSFKEEWKRKL--ALSSPRRPVARPRAATALE------LLRV-------SRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~i~~P~l~i 256 (308)
.... .+........ ................... .... ..+....++++++|++++
T Consensus 154 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 223 (277)
T d1brta_ 154 ADRY----------AFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALIL 223 (277)
T ss_dssp HCHH----------HHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEE
T ss_pred ccch----------hhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeE
Confidence 0000 0000000000 0000000000000000000 0000 012234567789999999
Q ss_pred eeCCCcccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 257 HGGDDVVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 257 ~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++|.+++++.. +.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 224 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL 275 (277)
T d1brta_ 224 HGTGDRTLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275 (277)
T ss_dssp EETTCSSSCGGGTHHHHHHHC--TTSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred eecCCCCcCHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999998765 5566666 6899999999999999 99999999998874
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=6.4e-34 Score=221.55 Aligned_cols=237 Identities=13% Similarity=0.094 Sum_probs=161.9
Q ss_pred cceeEEcCCCcEEEEEEecCCCCC-CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 109 (308)
.+..++..||.+|+++.+.|.+.. .++++||++||++++.. .|..+++.|+++||+|+++|+||| |.|++.... ++
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~-~~ 82 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE-FT 82 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------C-CC
T ss_pred eeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccC-CC
Confidence 456788899999999998876542 45789999999998887 568999999999999999999998 888775443 57
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
+.++.+|+.++++++... +..+++++||||||.+++.+|... +++++|+.+|...... .....+...
T Consensus 83 ~~~~~~dl~~vi~~l~~~--~~~~i~lvG~SmGG~ial~~A~~~--~v~~li~~~g~~~~~~---------~~~~~~~~~ 149 (302)
T d1thta_ 83 MTTGKNSLCTVYHWLQTK--GTQNIGLIAASLSARVAYEVISDL--ELSFLITAVGVVNLRD---------TLEKALGFD 149 (302)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHTTTS--CCSEEEEESCCSCHHH---------HHHHHHSSC
T ss_pred HHHHHHHHHHHHHhhhcc--CCceeEEEEEchHHHHHHHHhccc--ccceeEeecccccHHH---------HHHHHHhhc
Confidence 888999999999999876 667999999999999999988653 5899999988654221 111111111
Q ss_pred CCCcccccCCCCC--CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 190 VPTWRVVPTRGSL--PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 190 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
............. .................... ......+.+.++++|+++++|++|.+++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~i~~PvLii~G~~D~~V~~~ 214 (302)
T d1thta_ 150 YLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWD---------------TLDSTLDKVANTSVPLIAFTANNDDWVKQE 214 (302)
T ss_dssp GGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCS---------------SHHHHHHHHTTCCSCEEEEEETTCTTSCHH
T ss_pred cchhhhhhccccccccccchhhHHHHHHHHHhHHH---------------HHHHHHHHHhhcCCCEEEEEeCCCCccCHH
Confidence 1111100000000 00000000111111100000 002234567889999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCcccccCCch
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 298 (308)
.++.+++.++++++++++++|+||.+.++++
T Consensus 215 ~~~~l~~~i~s~~~kl~~~~g~~H~l~e~~~ 245 (302)
T d1thta_ 215 EVYDMLAHIRTGHCKLYSLLGSSHDLGENLV 245 (302)
T ss_dssp HHHHHHTTCTTCCEEEEEETTCCSCTTSSHH
T ss_pred HHHHHHHhCCCCCceEEEecCCCcccccChH
Confidence 9999999997778999999999999887765
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=7.2e-36 Score=231.84 Aligned_cols=249 Identities=17% Similarity=0.082 Sum_probs=161.3
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHH---HHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT---AVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
++.+|+|...|. .|+|||+||++.+.. .|..+ ...+.++||+|+++|+||||.|.......++...+++|
T Consensus 18 ~~~~i~y~~~G~------G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (283)
T d2rhwa1 18 SDFNIHYNEAGN------GETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90 (283)
T ss_dssp EEEEEEEEEECC------SSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHH
T ss_pred CCEEEEEEEEcC------CCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhh
Confidence 456899988662 367999999998876 44433 23455679999999999999998766554566677899
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch--hhhhHHHhhhhCCCcc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP--LEHLLFTVAWLVPTWR 194 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 194 (308)
+.+++++++.+ +++++|||+||.+++.+|.++|++|+++|+++|............. ................
T Consensus 91 i~~li~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (283)
T d2rhwa1 91 VKGLMDALDID-----RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETL 165 (283)
T ss_dssp HHHHHHHHTCC-----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHH
T ss_pred ccccccccccc-----ccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhH
Confidence 99999988766 9999999999999999999999999999999986443322211111 1111111100000000
Q ss_pred cc-cCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH-------HHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 195 VV-PTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV-------SRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 195 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
.. ............+........... ............ ..+....+.++++|+++++|++|.++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 239 (283)
T d2rhwa1 166 KQMLQVFLYDQSLITEELLQGRWEAIQ------RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL 239 (283)
T ss_dssp HHHHHHHCSCGGGCCHHHHHHHHHHHH------HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCT
T ss_pred HHHHHHhhcccccCcHHHHHHHHHHhh------hhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCH
Confidence 00 000000000111111000000000 000000000000 0123455778899999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 240 ~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL 280 (283)
T d2rhwa1 240 DHGLKLLWNI--DDARLHVFSKCGHWAQWEHADEFNRLVIDFL 280 (283)
T ss_dssp HHHHHHHHHS--SSEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999998 6899999999999999 99999999998764
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7e-34 Score=218.87 Aligned_cols=251 Identities=17% Similarity=0.260 Sum_probs=166.9
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.|++.||.+|+|..+|. .|+|||+||++++.. .|+.+++.|.++||+|+++|+||||.|+.+... +++++++
T Consensus 2 ~f~~~dG~~l~y~~~G~------g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~ 73 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWGS------GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG-NDYDTFA 73 (271)
T ss_dssp EEECTTSCEEEEEEESS------SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-CSHHHHH
T ss_pred EEEeECCeEEEEEEEcC------CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccc-ccccccc
Confidence 56789999999998863 356899999998887 678999999988999999999999999876554 5889999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHH-HHHHhcCCCccEEEEeCCcCCCCcCCCC--C-chhhhhHHHh----
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIAL-YITLRQKGAWDGLILNGAMCGISQKFKP--P-WPLEHLLFTV---- 186 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~-~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~-~~~~~~~~~~---- 186 (308)
+|+.++++.+..+ +++++|||+||.+++ .++..+|+++.+++++++.......... . ..........
T Consensus 74 ~~~~~~~~~~~~~-----~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (271)
T d1va4a_ 74 DDIAQLIEHLDLK-----EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELL 148 (271)
T ss_dssp HHHHHHHHHHTCC-----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred ccceeeeeecCCC-----cceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 9999999988766 999999999887654 5677789999999999876543322111 1 1111100000
Q ss_pred ---hhhCCCcc---cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEee
Q 035721 187 ---AWLVPTWR---VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 187 ---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g 258 (308)
........ ....................... ............. .+....++++++|+++++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 219 (271)
T d1va4a_ 149 KDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL---------ASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHG 219 (271)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHH---------SCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEE
T ss_pred hhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhh---------hhhhhhhhcccccchhhhhhhhhhcccceeeccc
Confidence 00000000 00000000000000000000000 0111111111111 2233456788999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.+++++.+.++.+.+. +++++++++++||+++ ++|+++++.|.++|
T Consensus 220 ~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL 269 (271)
T d1va4a_ 220 DGDQIVPFETTGKVAAELI-KGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269 (271)
T ss_dssp TTCSSSCGGGTHHHHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999988877765543 6899999999999999 99999999998764
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=8.5e-35 Score=221.99 Aligned_cols=239 Identities=13% Similarity=-0.048 Sum_probs=156.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.++|||+||+++++. .|+.+++.|+++||+|+++|+||||.|+.+....++..+++.|+..+++..... .+++++
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lv 76 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSAD----EKVILV 76 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSS----SCEEEE
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhccccc----cccccc
Confidence 467999999998876 678999999999999999999999999887666567888888887777665443 389999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc---ccCCCCCCCcccccHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV---VPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 214 (308)
|||+||.+++.++.++|++++++|++++........ ..................... ...................
T Consensus 77 ghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T d1xkla_ 77 GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHN-SSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLA 155 (258)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSC-TTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHH
T ss_pred ccchhHHHHHHHhhhhccccceEEEecccCCCcccc-hHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHH
Confidence 999999999999999999999999999864432211 111111111110000000000 0000000111111111111
Q ss_pred HHhhCCCCCCCcchHHHHHHH---------HHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEE
Q 035721 215 LALSSPRRPVARPRAATALEL---------LRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSI 285 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (308)
..... ............. .....+....+..+++|+++++|++|.++|++..+.+.+.+ +++++++
T Consensus 156 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 230 (258)
T d1xkla_ 156 HKLYQ---LCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GVTEAIE 230 (258)
T ss_dssp HHTST---TSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CCSEEEE
T ss_pred HHhhh---cccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC--CCCEEEE
Confidence 11100 0000000000000 00001222345667899999999999999999999999998 6899999
Q ss_pred ecCCccccc-CCchhhHHHhhhc
Q 035721 286 YPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 286 ~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++++||+++ ++|+++++.|.++
T Consensus 231 i~~~gH~~~~e~P~~~~~~l~e~ 253 (258)
T d1xkla_ 231 IKGADHMAMLCEPQKLCASLLEI 253 (258)
T ss_dssp ETTCCSCHHHHSHHHHHHHHHHH
T ss_pred ECCCCCchHHhCHHHHHHHHHHH
Confidence 999999999 9999999998865
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=2.6e-34 Score=222.42 Aligned_cols=250 Identities=12% Similarity=0.092 Sum_probs=158.9
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHH
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 119 (308)
.+++|+|..+|. .|+|||+||+++++. .|..+++.|.++||+|+++|+||||.|+.+... ++++++++|+.+
T Consensus 11 ~~v~i~y~~~G~------g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~di~~ 82 (279)
T d1hkha_ 11 TPIELYYEDQGS------GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTG-YDYDTFAADLHT 82 (279)
T ss_dssp EEEEEEEEEESS------SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSC-CSHHHHHHHHHH
T ss_pred CeEEEEEEEEcc------CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCccccccc-cchhhhhhhhhh
Confidence 345889988763 467999999998877 668888888888999999999999999876544 689999999999
Q ss_pred HHHHHHHhcCCCCCEEEEEechhh-HHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC--CchhhhhHHHhhh--------
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGG-AIALYITLRQKGAWDGLILNGAMCGISQKFKP--PWPLEHLLFTVAW-------- 188 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~-------- 188 (308)
+++.++.+ +++++|||||| .++..++..+|++|.+++++++.......... .............
T Consensus 83 ~i~~l~~~-----~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (279)
T d1hkha_ 83 VLETLDLR-----DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFA 157 (279)
T ss_dssp HHHHHTCC-----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHH
T ss_pred hhhhcCcC-----ccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhh
Confidence 99998766 99999999996 56667788889999999999875443221111 1111111100000
Q ss_pred ----hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCccc
Q 035721 189 ----LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 189 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 264 (308)
......... . ..... ............... .....................+.++++++|+++++|++|.++
T Consensus 158 ~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 233 (279)
T d1hkha_ 158 WFTDFYKNFYNLD-E-NLGSR-ISEQAVTGSWNVAIG-SAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNIL 233 (279)
T ss_dssp HHHHHHHHHHTHH-H-HBTTT-BCHHHHHHHHHHHHT-SCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSS
T ss_pred hhhhhhhhhcccc-h-hhhhh-hhhhhhhhhhhhhcc-cchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCcc
Confidence 000000000 0 00000 001000000000000 000000110001000001222345567899999999999999
Q ss_pred ChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 265 DPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 265 ~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+ ..+.+.+.+ +++++++++++||+++ ++|+++++.|.++|
T Consensus 234 ~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 277 (279)
T d1hkha_ 234 PIDATARRFHQAV--PEADYVEVEGAPHGLLWTHADEVNAALKTFL 277 (279)
T ss_dssp CTTTTHHHHHHHC--TTSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 875 456777777 6899999999999999 99999999998764
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=5.1e-34 Score=222.27 Aligned_cols=255 Identities=12% Similarity=0.047 Sum_probs=160.1
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc---cCCCcc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA---HIPDLN 111 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~ 111 (308)
+....+|.+|+|...|. .|+|||+||+++++. .|..+++.|++ +|+|+++|+||||.|+.... ...+++
T Consensus 11 ~~~~~~~~~l~y~~~G~------gp~vv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 82 (293)
T d1ehya_ 11 YEVQLPDVKIHYVREGA------GPTLLLLHGWPGFWW-EWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKYSLD 82 (293)
T ss_dssp EEEECSSCEEEEEEEEC------SSEEEEECCSSCCGG-GGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGGCHH
T ss_pred eEEEECCEEEEEEEECC------CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCcccCCccccccccccccch
Confidence 34456788999988762 468999999998887 67899999966 69999999999999976432 234678
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC--chhhhhHHH----
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP--WPLEHLLFT---- 185 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~~~~~~~~---- 185 (308)
++++|+.++++.++.. +++++||||||.+|+.++.++|+++.++|++++........... .........
T Consensus 83 ~~a~~~~~~~~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T d1ehya_ 83 KAADDQAALLDALGIE-----KAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQL 157 (293)
T ss_dssp HHHHHHHHHHHHTTCC-----CEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTC
T ss_pred hhhhHHHhhhhhcCcc-----ccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhcc
Confidence 8899999998887766 99999999999999999999999999999999864321111000 000000000
Q ss_pred --hhhhCCCcc---------cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh------hhhcCC
Q 035721 186 --VAWLVPTWR---------VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL------QGRFEE 248 (308)
Q Consensus 186 --~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 248 (308)
......... ..... ................... ................... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T d1ehya_ 158 DMAVEVVGSSREVCKKYFKHFFDHW-SYRDELLTEEELEVHVDNC----MKPDNIHGGFNYYRANIRPDAALWTDLDHTM 232 (293)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHT-SSSSCCSCHHHHHHHHHHH----TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSC
T ss_pred chhhhhhccchhHHHHHHHHhhhhc-ccccccccHHHHHhhhhcc----ccchhhhhhhhhhhhccccchhhhhhhhhhc
Confidence 000000000 00000 0000000110000000000 0001111111111110000 011345
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|+++|+|++|.+++.+...++.+... +++++++++++||+++ ++|+++++.|.+++
T Consensus 233 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ff 292 (293)
T d1ehya_ 233 SDLPVTMIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292 (293)
T ss_dssp BCSCEEEEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred cCCceEEEEeCCCCCcCHHHHHHHHHHhC-CCCEEEEECCCCCchHHHCHHHHHHHHHHhh
Confidence 78999999999999999887766554443 6899999999999999 99999999998875
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=5.7e-34 Score=224.26 Aligned_cols=255 Identities=16% Similarity=0.100 Sum_probs=159.1
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIP 108 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~ 108 (308)
++++.++.+.||.+|+|..+|+++ .++|||+||++++.. .|......+ ..+|+|+++|+||||.|+++. ...+
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~----g~pvvllHG~~g~~~-~~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~~~~~~ 83 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPH----GKPVVMLHGGPGGGC-NDKMRRFHD-PAKYRIVLFDQRGSGRSTPHADLVDN 83 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT----SEEEEEECSTTTTCC-CGGGGGGSC-TTTEEEEEECCTTSTTSBSTTCCTTC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCC----CCEEEEECCCCCCcc-chHHHhHHh-hcCCEEEEEeccccCCCCccccccch
Confidence 457788999999999999998654 567999999987765 333343333 458999999999999998643 3346
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC---CCc---hhhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK---PPW---PLEHL 182 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~---~~~~~ 182 (308)
+++++++|+.+++++++.+ +++++||||||.+++.+|.++|+++++++++++......... ... .....
T Consensus 84 ~~~~~~~dl~~~~~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T d1azwa_ 84 TTWDLVADIERLRTHLGVD-----RWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDA 158 (313)
T ss_dssp CHHHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHH
T ss_pred hHHHHHHHHHHHHHhhccc-----cceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHH
Confidence 7899999999999999877 999999999999999999999999999999998654321100 000 00000
Q ss_pred HHHhhhhCCCcccccC-----C-CCCCCcccccH---HHHHHHhhCCCCCCCcchHHHH-------HHHHHHH-------
Q 035721 183 LFTVAWLVPTWRVVPT-----R-GSLPMVSFKEE---WKRKLALSSPRRPVARPRAATA-------LELLRVS------- 239 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~------- 239 (308)
................ . ........... ........ ............. .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
T d1azwa_ 159 WEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGA-TSFLHVDEDFVTGHEDAHFALAFARIENHYFVNG 237 (313)
T ss_dssp HHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH-TSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhcccc-ccccccchhhhcccchhHHHHHHhHHHHHHHhhc
Confidence 0111111100000000 0 00000000000 00000000 0011111000000 0000000
Q ss_pred -------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCchh
Q 035721 240 -------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299 (308)
Q Consensus 240 -------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 299 (308)
.........+++|+++++|++|.++|++.++.+.+.+ +++++++++++||+++ +|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~--p~a~~~~i~~aGH~~~-ep~~ 301 (313)
T d1azwa_ 238 GFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQISPASGHSAF-EPEN 301 (313)
T ss_dssp GGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT-SHHH
T ss_pred cccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCCCC-CchH
Confidence 0112335567899999999999999999999999998 7899999999999876 3543
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-34 Score=220.57 Aligned_cols=236 Identities=19% Similarity=0.157 Sum_probs=150.4
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
|+|...|. + +++|||+||++++.. .|+.+++.|.+ +|+|+++|+||||.|+..... +. .|+.+.+..
T Consensus 2 i~y~~~G~--g---~~~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~--~~----~d~~~~~~~ 68 (256)
T d1m33a_ 2 IWWQTKGQ--G---NVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGFGAL--SL----ADMAEAVLQ 68 (256)
T ss_dssp CCEEEECC--C---SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSCCCC--CH----HHHHHHHHT
T ss_pred eEEEEECC--C---CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEeCCCCCCccccccc--cc----ccccccccc
Confidence 56766653 2 568999999998887 67889999975 699999999999999764322 33 233333332
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh--------hhCCCccc
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA--------WLVPTWRV 195 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 195 (308)
+ ...+++++||||||.+++.+|.++|+++++++++++...................... .....+..
T Consensus 69 ~-----~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (256)
T d1m33a_ 69 Q-----APDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLA 143 (256)
T ss_dssp T-----SCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-----cccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhh
Confidence 2 3349999999999999999999999999999999876554332222211111111110 00000000
Q ss_pred ccCCCCCCCcccccHH--HHHHHhhCCCCCCCcchHHHHHHHHHHH--HHhhhhcCCCCcceEEEeeCCCcccChHHHHH
Q 035721 196 VPTRGSLPMVSFKEEW--KRKLALSSPRRPVARPRAATALELLRVS--RDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 196 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
. . ........... ......... .............. .+..+.++++++|+++++|++|.++|++.++.
T Consensus 144 ~--~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~ 215 (256)
T d1m33a_ 144 L--Q-TMGTETARQDARALKKTVLALP-----MPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM 215 (256)
T ss_dssp T--T-STTSTTHHHHHHHHHHHHHTSC-----CCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-
T ss_pred h--h-hccccchhhHHHHHHHhhhhcc-----hhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHH
Confidence 0 0 11111111111 111111111 11122222222211 23456778899999999999999999999888
Q ss_pred HHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 272 LYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.+.+ +++++++++++||+++ ++|+++++.|.++
T Consensus 216 l~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 250 (256)
T d1m33a_ 216 LDKLW--PHSESYIFAKAAHAPFISHPAEFCHLLVAL 250 (256)
T ss_dssp CTTTC--TTCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHC--CCCEEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 88877 6899999999999999 9999999998775
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=2.1e-34 Score=219.87 Aligned_cols=233 Identities=13% Similarity=0.100 Sum_probs=152.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEec
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S 140 (308)
.||+||+++++. .|+.+++.|.++||+|+++|+||||.|+.+....++++++++++.++++.+... .+++++|||
T Consensus 5 ~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~lvGhS 79 (256)
T d3c70a1 5 FVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPG----EKVILVGES 79 (256)
T ss_dssp EEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTT----CCEEEEEET
T ss_pred EEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccc----cceeecccc
Confidence 689999988776 678999999999999999999999999987666678899999999988775433 399999999
Q ss_pred hhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC--CCCCcccccHHHHHHHhh
Q 035721 141 LGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG--SLPMVSFKEEWKRKLALS 218 (308)
Q Consensus 141 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 218 (308)
|||.+++.++.++|++|+++|++++........ .......................... ..................
T Consensus 80 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T d3c70a1 80 CGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHC-PSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYT 158 (256)
T ss_dssp THHHHHHHHHHHHGGGEEEEEEESCCCCCSSSC-TTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTST
T ss_pred hHHHHHHHHhhcCchhhhhhheeccccCCcccc-hhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhh
Confidence 999999999999999999999999754332211 11111111111111100000000000 000000000111100000
Q ss_pred CCCCCCCcchHHHHHHHHH--------H---HHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEec
Q 035721 219 SPRRPVARPRAATALELLR--------V---SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP 287 (308)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (308)
.. ........... . ..........+++|+++|+|++|.+++++..+.+.+.+ +++++++++
T Consensus 159 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~ 230 (256)
T d3c70a1 159 ----LC--GPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYKVE 230 (256)
T ss_dssp ----TS--CHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSEEEECC
T ss_pred ----hc--chhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC--CCCEEEEEC
Confidence 00 00000000000 0 00111223446899999999999999999999999988 689999999
Q ss_pred CCccccc-CCchhhHHHhhhc
Q 035721 288 GMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 288 ~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++||+++ ++|+++++.|.++
T Consensus 231 ~agH~~~~e~P~~~~~~l~~~ 251 (256)
T d3c70a1 231 GGDHKLQLTKTKEIAEILQEV 251 (256)
T ss_dssp SCCSCHHHHSHHHHHHHHHHH
T ss_pred CCCCchHHhCHHHHHHHHHHH
Confidence 9999999 9999999988764
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=5.9e-33 Score=223.89 Aligned_cols=297 Identities=11% Similarity=0.079 Sum_probs=177.0
Q ss_pred cccCccCCCCcccccccccccccceeEEcCCCcEEEEEEec--CC--CCCCCcceEEEEccCCCccchHH-----HHHHH
Q 035721 10 NEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWT--PL--PPAKTLGVLCVVHGFTGESSWIV-----QLTAV 80 (308)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~--~~--~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~ 80 (308)
...+|...+...+.....+++.++.++++.||..|...... +. ....++|+|||+||+++++..|. ..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~ 85 (377)
T d1k8qa_ 6 HPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAF 85 (377)
T ss_dssp SCCCGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHH
T ss_pred CCCCCCcCCCHHHHHHHcCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHH
Confidence 34456666666666666788889999999999887765442 11 12346789999999998876331 34789
Q ss_pred HHHHcCCeEEEecCCCCcCCCCcccc--------CCCcchH-HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 81 LFAKSGFATCAIDHQGHGFSDGLVAH--------IPDLNPV-VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 81 ~l~~~g~~v~~~d~~G~G~s~~~~~~--------~~~~~~~-~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.|+++||+|+++|+||||.|+.+... ..+++++ ..|+.++++.+.... +..+++++||||||.+++.++.
T Consensus 86 ~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~-g~~~v~lvGhS~GG~ia~~~a~ 164 (377)
T d1k8qa_ 86 ILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT-GQDKLHYVGHSQGTTIGFIAFS 164 (377)
T ss_dssp HHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH-CCSCEEEEEETHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHc-CCCCEEEEEecchHHHHHHHHH
Confidence 99999999999999999999864332 1233333 357777777766554 5569999999999999999999
Q ss_pred hcCCCccEEEEeCCcCCCCcCCCCCchhhhhH----HHhhhhCCCcccccCC--------CCCCCcccccHHHHH-HHhh
Q 035721 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLL----FTVAWLVPTWRVVPTR--------GSLPMVSFKEEWKRK-LALS 218 (308)
Q Consensus 152 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~ 218 (308)
++|+++++++++.................... ................ ............... ....
T Consensus 165 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T d1k8qa_ 165 TNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIIC 244 (377)
T ss_dssp HCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHH
T ss_pred hhhhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhc
Confidence 99998888877654433221111111111100 0000000000000000 000000000000000 0000
Q ss_pred CCC--------------CCCCcchHHHHHHHHHHHH-----------------------HhhhhcCCCCcceEEEeeCCC
Q 035721 219 SPR--------------RPVARPRAATALELLRVSR-----------------------DLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 219 ~~~--------------~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~i~~P~l~i~g~~D 261 (308)
... .............+..... .....++++++|+++++|++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D 324 (377)
T d1k8qa_ 245 GFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGND 324 (377)
T ss_dssp CCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTC
T ss_pred CCCcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCC
Confidence 000 0000111111111111100 012246788999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCcccc--c--CCchhhHHHhhhcC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQL--I--GEPEENVELVFGEM 308 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~--~--~~~~~~~~~i~~~i 308 (308)
.+++++.++.+.+.+++ ..+.++++++||+- . +.++++.+.|+++|
T Consensus 325 ~~~~~~~~~~l~~~lp~-~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl 374 (377)
T d1k8qa_ 325 LLADPHDVDLLLSKLPN-LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM 374 (377)
T ss_dssp SSSCHHHHHHHHTTCTT-EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHH
T ss_pred CccCHHHHHHHHHHCCC-CeEEEEeCCCCCcchhhccchHHHHHHHHHHHH
Confidence 99999999999998842 35788999999972 3 44788888888764
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=1.7e-31 Score=209.34 Aligned_cols=260 Identities=15% Similarity=0.109 Sum_probs=160.4
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIP 108 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~ 108 (308)
++++.++.+.||.+|+|..+|+++ .|+|||+||+++++. .|..+...|+ +||+|+++|+||+|.|+.... ..+
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~----g~pvvllHG~~~~~~-~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~~~~~~~ 83 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPN----GKPAVFIHGGPGGGI-SPHHRQLFDP-ERYKVLLFDQRGCGRSRPHASLDNN 83 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT----SEEEEEECCTTTCCC-CGGGGGGSCT-TTEEEEEECCTTSTTCBSTTCCTTC
T ss_pred CCcCCEEEeCCCcEEEEEEecCCC----CCeEEEECCCCCccc-chHHHHHHhh-cCCEEEEEeCCCccccccccccccc
Confidence 345678888899999999998754 467999999998887 5667777665 479999999999999986433 335
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC------CCCchhhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF------KPPWPLEHL 182 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~------~~~~~~~~~ 182 (308)
+...+++|+..+++.+... +++++|||+||.++..+|..+|++|.+++++++........ .........
T Consensus 84 ~~~~~~~d~~~~~~~~~~~-----~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T d1wm1a_ 84 TTWHLVADIERLREMAGVE-----QWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEK 158 (313)
T ss_dssp SHHHHHHHHHHHHHHTTCS-----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHH
T ss_pred chhhHHHHHHhhhhccCCC-----cceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhh
Confidence 6777888888888887766 99999999999999999999999999999998754421100 000000000
Q ss_pred HHHhhhhCCCcccccC------CCCCCCcccccH--HHHHHHhhCCCCCCCcc------hHHHHHHHH---HHH------
Q 035721 183 LFTVAWLVPTWRVVPT------RGSLPMVSFKEE--WKRKLALSSPRRPVARP------RAATALELL---RVS------ 239 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~------ 239 (308)
................ ............ ................. ......... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
T d1wm1a_ 159 WERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGF 238 (313)
T ss_dssp HHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGG
T ss_pred hhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcc
Confidence 0000000000000000 000000000000 00000000100000000 000000000 000
Q ss_pred -----HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHH
Q 035721 240 -----RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVEL 303 (308)
Q Consensus 240 -----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 303 (308)
.........+++|+++++|++|.++|++.++.+.+.+ +++++++++++||.+ ++|+.+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~--p~a~~~~i~~aGH~~-~eP~~~~~l 304 (313)
T d1wm1a_ 239 LESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSY-DEPGILHQL 304 (313)
T ss_dssp CSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSST-TSHHHHHHH
T ss_pred cccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHC--CCCEEEEECCCCCCc-CCchHHHHH
Confidence 1122334567899999999999999999999999999 789999999999965 457655543
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=4.2e-31 Score=205.77 Aligned_cols=264 Identities=15% Similarity=0.056 Sum_probs=154.3
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
+.+..+.+.+|.+|+|..+|. +|+|||+||++++.. .|+.+++.|++ +|+|+++|+||||.|+.........
T Consensus 7 ~~~~~fi~~~g~~i~y~~~G~------g~~vvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~ 78 (298)
T d1mj5a_ 7 FGEKKFIEIKGRRMAYIDEGT------GDPILFQHGNPTSSY-LWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPSGPER 78 (298)
T ss_dssp SSCCEEEEETTEEEEEEEESC------SSEEEEECCTTCCGG-GGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred CCCCEEEEECCEEEEEEEEcC------CCcEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEEeCCCCCCCCCCccccccc
Confidence 444566677999999998763 467999999998877 66889999976 4999999999999998755432111
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
.....+...++..+.... ...+++++||||||.+++.++.++|++|.+++++++.........................
T Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (298)
T d1mj5a_ 79 YAYAEHRDYLDALWEALD-LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA 157 (298)
T ss_dssp SCHHHHHHHHHHHHHHTT-CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT
T ss_pred cccchhhhhhcccccccc-ccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhh
Confidence 122222222222222221 3459999999999999999999999999999999876543322221111111111000000
Q ss_pred --------CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCC----------cchHHHHHHHHHHHHHhhhhcCCCCcc
Q 035721 191 --------PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVA----------RPRAATALELLRVSRDLQGRFEEVEVP 252 (308)
Q Consensus 191 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~P 252 (308)
......... ......................... ...............+....+..+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 236 (298)
T d1mj5a_ 158 GEELVLQDNVFVEQVLP-GLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIP 236 (298)
T ss_dssp HHHHHTTTCHHHHTHHH-HTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSC
T ss_pred hhhhhhhhhhhhhhhcc-ccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhccee
Confidence 000000000 0000000011110000000000000 000000011111123444567889999
Q ss_pred eEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 253 MLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 253 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++|++|.+.+ ...+.+.+.+ ++++++++ ++||+++ ++|+++++.|.++|
T Consensus 237 ~l~i~g~~d~~~~-~~~~~~~~~~--p~~~~~~~-~~GH~~~~e~P~~v~~~i~~fl 289 (298)
T d1mj5a_ 237 KLFINAEPGALTT-GRMRDFCRTW--PNQTEITV-AGAHFIQEDSPDEIGAAIAAFV 289 (298)
T ss_dssp EEEEEEEECSSSS-HHHHHHHTTC--SSEEEEEE-EESSCGGGTCHHHHHHHHHHHH
T ss_pred EEEEecCCCCcCh-HHHHHHHHHC--CCCEEEEe-CCCCchHHhCHHHHHHHHHHHH
Confidence 9999999998765 5667777776 56777665 5799999 99999999988764
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=1.8e-30 Score=195.93 Aligned_cols=225 Identities=18% Similarity=0.228 Sum_probs=149.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|...... ....+...++..++..+... +..+++++
T Consensus 11 ~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 86 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH-TGPDDWWQDVMNGYEFLKNK--GYEKIAVA 86 (242)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT-CCHHHHHHHHHHHHHHHHHH--TCCCEEEE
T ss_pred CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccc-cchhHHHHHHHHHHhhhhhc--ccCceEEE
Confidence 567999999998887 668999999999999999999999998765443 35566667777777666655 56799999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
|||+||.+++.++.++|. ...+++++........ ................ ... ..........
T Consensus 87 G~S~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~~ 149 (242)
T d1tqha_ 87 GLSLGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEE---TMYEGVLEYAREYKKR----EGK--------SEEQIEQEME 149 (242)
T ss_dssp EETHHHHHHHHHHTTSCC--SCEEEESCCSSCCCHH---HHHHHHHHHHHHHHHH----HTC--------CHHHHHHHHH
T ss_pred EcchHHHHhhhhcccCcc--cccccccccccccchh---HHHHHHHHHHHHHhhh----ccc--------hhhhHHHHHh
Confidence 999999999999999985 3455555543322110 0011111111100000 000 0000000000
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C-
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G- 295 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~- 295 (308)
....... ................+..+++|+++++|++|.+++++.++.+++.+.++++++++++++||+++ +
T Consensus 150 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 224 (242)
T d1tqha_ 150 KFKQTPM-----KTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQ 224 (242)
T ss_dssp HHTTSCC-----TTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGST
T ss_pred hhhhhcc-----chhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCcccc
Confidence 0000000 00111111223344567889999999999999999999999999998777899999999999998 6
Q ss_pred CchhhHHHhhhcC
Q 035721 296 EPEENVELVFGEM 308 (308)
Q Consensus 296 ~~~~~~~~i~~~i 308 (308)
+++++.+.|.++|
T Consensus 225 ~~~~~~~~i~~Fl 237 (242)
T d1tqha_ 225 EKDQLHEDIYAFL 237 (242)
T ss_dssp THHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 5888988888764
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.97 E-value=2.3e-30 Score=206.03 Aligned_cols=235 Identities=13% Similarity=0.034 Sum_probs=159.6
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+.+.+...+. .+|.+|.+..+.|+.. .+.|+||++||+.++...+ ..+.+.|.++||.|+++|+||+|.|.......
T Consensus 103 ~~~~e~v~ip-~dg~~l~g~l~~P~~~-~~~P~Vi~~hG~~~~~e~~-~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~ 179 (360)
T d2jbwa1 103 SPPAERHELV-VDGIPMPVYVRIPEGP-GPHPAVIMLGGLESTKEES-FQMENLVLDRGMATATFDGPGQGEMFEYKRIA 179 (360)
T ss_dssp SSCEEEEEEE-ETTEEEEEEEECCSSS-CCEEEEEEECCSSCCTTTT-HHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CCCeEEeecC-cCCcccceEEEecCCC-CCceEEEEeCCCCccHHHH-HHHHHHHHhcCCEEEEEccccccccCcccccc
Confidence 4445556665 4788999999988654 5789999999998887644 56888999999999999999999997654332
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.++..++..+++.+..... +..+|.++||||||.+|+.+|...| +++++|.+++....................
T Consensus 180 ---~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~~~~~~~~~~~- 254 (360)
T d2jbwa1 180 ---GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLETPLTKESWKY- 254 (360)
T ss_dssp ---SCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGSCHHHHHHHHH-
T ss_pred ---ccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhhhhhhhHHHHH-
Confidence 2333445556666655432 4568999999999999999999887 699999998865432111100000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
.. ................+....+.++++|+|+++|++|. +|+
T Consensus 255 --~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~ 297 (360)
T d2jbwa1 255 --VS----------------------------------KVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPL 297 (360)
T ss_dssp --HT----------------------------------TCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCT
T ss_pred --hc----------------------------------cCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCH
Confidence 00 00000111111111123344577899999999999998 589
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
+.++.+++.++.++++++++++++|.....+.+....+.++
T Consensus 298 ~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~~~~~~~~i~dW 338 (360)
T d2jbwa1 298 SFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADW 338 (360)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCGGGGGGTTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCcCCCcChHHHHHHHHHH
Confidence 99999999986556788889999998776666666665543
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=3.9e-31 Score=202.15 Aligned_cols=242 Identities=15% Similarity=0.111 Sum_probs=134.7
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
+.+|+|.. +.. .+|+|||+||++++.. .|..+++.|++.||+|+++|+||||.|...... +......+...+
T Consensus 4 ~~~lh~~~--~~~---~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~--~~~~~~~~~~~~ 75 (264)
T d1r3da_ 4 SNQLHFAK--PTA---RTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCD--NFAEAVEMIEQT 75 (264)
T ss_dssp CEEEESSC--CBT---TBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC---------CHHHHHHHHH
T ss_pred CCeEEEcC--CCC---CCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccc--ccchhhhhhhhc
Confidence 34566532 332 3789999999998887 678999999988999999999999999876543 222222222111
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh----h--hCCC--
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA----W--LVPT-- 192 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~-- 192 (308)
.. .... ...+++++|||+||.+++.++.++|+++.+++++.+.......... ........... . ....
T Consensus 76 ~~-~~~~--~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T d1r3da_ 76 VQ-AHVT--SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQEN-EEKAARWQHDQQWAQRFSQQPIEH 151 (264)
T ss_dssp HH-TTCC--TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSH-HHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred cc-cccc--ccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccch-hhhhhhhhhhhhhhhhhhhhhhhh
Confidence 11 1111 4458999999999999999999999999998887654432211110 00000000000 0 0000
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-----HHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-----RDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
....... ...................... ............ ....+.+..+++|+++++|++|..+
T Consensus 152 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~--- 222 (264)
T d1r3da_ 152 VLSDWYQ-QAVFSSLNHEQRQTLIAQRSAN-----LGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF--- 222 (264)
T ss_dssp HHHHHTT-SGGGTTCCHHHHHHHHHHHTTS-----CHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH---
T ss_pred hhhhhhh-hhhhcccchHHHHHHHHHHhhh-----hhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH---
Confidence 0000000 0000000011111111100000 000000111100 1112345678999999999999654
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..+.+. +++++++++++||+++ ++|+++++.|.++|
T Consensus 223 --~~~~~~---~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl 259 (264)
T d1r3da_ 223 --QQLAES---SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMI 259 (264)
T ss_dssp --HHHHHH---HCSEEEEETTCCSCHHHHCHHHHHHHHHHHH
T ss_pred --HHHHhc---CCCeEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 233333 4789999999999999 99999999988764
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.97 E-value=1.3e-28 Score=179.94 Aligned_cols=195 Identities=18% Similarity=0.152 Sum_probs=146.8
Q ss_pred cceeEEcCCCcEEEEEEecCCCC-CCCcceEEEEccC---CCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGF---TGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~---~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
...++...+| +|......|... ..+.+++|++|+. +++.. .....+++.|+++||.|+.+|+||+|.|.+...
T Consensus 9 ~~l~i~gp~G-~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~- 86 (218)
T d2fuka1 9 AALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD- 86 (218)
T ss_dssp EEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC-
T ss_pred eEEEEeCCCc-cEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccC-
Confidence 3456777788 677777666443 2345567888854 33322 245678999999999999999999999987543
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
+.....+|+.++++++.... +..+++++||||||.+++.+|.+.+ ++++|+++|+....
T Consensus 87 --~~~~~~~D~~a~~~~~~~~~-~~~~v~l~G~S~Gg~va~~~a~~~~--~~~lil~ap~~~~~---------------- 145 (218)
T d2fuka1 87 --HGDGEQDDLRAVAEWVRAQR-PTDTLWLAGFSFGAYVSLRAAAALE--PQVLISIAPPAGRW---------------- 145 (218)
T ss_dssp --TTTHHHHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHHHC--CSEEEEESCCBTTB----------------
T ss_pred --cCcchHHHHHHHHHHHhhcc-cCceEEEEEEcccchhhhhhhcccc--cceEEEeCCcccch----------------
Confidence 45677899999999998875 6678999999999999999888753 78999999853211
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
.+ ...++.+|+|+|+|++|.++|+
T Consensus 146 --------------~~------------------------------------------~~~~~~~P~Lvi~G~~D~~vp~ 169 (218)
T d2fuka1 146 --------------DF------------------------------------------SDVQPPAQWLVIQGDADEIVDP 169 (218)
T ss_dssp --------------CC------------------------------------------TTCCCCSSEEEEEETTCSSSCH
T ss_pred --------------hh------------------------------------------hccccccceeeEecCCCcCcCH
Confidence 00 0123467999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhh
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFG 306 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~ 306 (308)
+.++++++.+. ..+++++++|++|++..+.+++.+.+.+
T Consensus 170 ~~~~~l~~~~~-~~~~l~~i~ga~H~f~~~~~~l~~~~~~ 208 (218)
T d2fuka1 170 QAVYDWLETLE-QQPTLVRMPDTSHFFHRKLIDLRGALQH 208 (218)
T ss_dssp HHHHHHHTTCS-SCCEEEEETTCCTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcc-CCceEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 99999988775 3578999999999877544555555544
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.9e-28 Score=187.69 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=88.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.++|||+||++++.. .|+.+.+.|.+. ||+|+++|+||||.|..+.. ++++++++|+.++++.+. + +++
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~--~~~~~~~~~l~~~l~~l~-~-----~~~ 72 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKAP-Q-----GVH 72 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHCT-T-----CEE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc--cCHHHHHHHHHHHHhccC-C-----eEE
Confidence 466899999998887 678999999875 79999999999999987654 478889999999988776 4 999
Q ss_pred EEEechhhHHHHHHHHhcCC-CccEEEEeCCcC
Q 035721 136 LYSESLGGAIALYITLRQKG-AWDGLILNGAMC 167 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 167 (308)
++||||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 73 lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 73 LICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp EEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred EEccccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 99999999999999999998 699999998754
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=3.6e-29 Score=202.31 Aligned_cols=128 Identities=14% Similarity=0.076 Sum_probs=109.6
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcC------CeEEEecCCCCcCCCCccc-
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSG------FATCAIDHQGHGFSDGLVA- 105 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g------~~v~~~d~~G~G~s~~~~~- 105 (308)
..+.++.||.+|+|....... +..++|||+||++++.. .|+.+++.|++.| |+|+++|+||+|.|+.+..
T Consensus 83 ~~f~~~i~G~~iHf~h~~~~~--~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~ 159 (394)
T d1qo7a_ 83 PQFTTEIEGLTIHFAALFSER--EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLD 159 (394)
T ss_dssp CEEEEEETTEEEEEEEECCSC--TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSS
T ss_pred CCeEEEECCEEEEEEEEeccC--CCCCEEEEeccccccHH-HHHHHHHhhccccCCcccceeeecccccccCCCCCCCCC
Confidence 345667799999997665443 35789999999999887 6789999999987 9999999999999997643
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
..++....++++..+++.++.. +.+++|||+||.++..++..+|+++.+++++.....
T Consensus 160 ~~y~~~~~a~~~~~l~~~lg~~-----~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 160 KDFGLMDNARVVDQLMKDLGFG-----SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCT-----TCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred CccCHHHHHHHHHHHHhhccCc-----ceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 4478899999999999988776 999999999999999999999999999998876544
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=5.8e-28 Score=190.08 Aligned_cols=238 Identities=16% Similarity=0.137 Sum_probs=156.8
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.++..+...+.+.||.+|++.++.|.+. .+.|+||++||++++.. .|...+..|+++||.|+++|+||+|.|......
T Consensus 52 ~~~~~~~v~~~~~dg~~i~~~l~~P~~~-~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~ 129 (318)
T d1l7aa_ 52 DGVKVYRLTYKSFGNARITGWYAVPDKE-GPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSIS 129 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESSC-SCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCC
T ss_pred CCeEEEEEEEECCCCcEEEEEEEecCCC-CCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCCccc
Confidence 3445567778888999999999888765 67899999999998887 446788999999999999999999999864332
Q ss_pred CC-----------------CcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 107 IP-----------------DLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 107 ~~-----------------~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.. .....+.|....++.+..... +..++.++|+|+||..++..+...+. +++++...+...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~ 208 (318)
T d1l7aa_ 130 PHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLS 208 (318)
T ss_dssp SSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSC
T ss_pred chhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccc
Confidence 11 011234566666666666533 45679999999999999999998874 777776665432
Q ss_pred CCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhc
Q 035721 169 ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRF 246 (308)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (308)
.. .... ...... .... ......... .......... ........+
T Consensus 209 ~~---------~~~~---~~~~~~-------------~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 254 (318)
T d1l7aa_ 209 NF---------ERAI---DVALEQ-------------PYLE--INSFFRRNG-------SPETEVQAMKTLSYFDIMNLA 254 (318)
T ss_dssp CH---------HHHH---HHCCST-------------TTTH--HHHHHHHSC-------CHHHHHHHHHHHHTTCHHHHG
T ss_pred cH---------HHHh---hccccc-------------ccch--hhhhhhccc-------ccccccccccccccccccccc
Confidence 11 0000 000000 0000 000000000 0000000000 001223446
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHH
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVE 302 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~ 302 (308)
.++++|+|+++|++|.++|++.+..++++++ .++++++++++||... +..+++.+
T Consensus 255 ~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~-~~~~l~~~~~~gH~~~~~~~~~~~~ 310 (318)
T d1l7aa_ 255 DRVKVPVLMSIGLIDKVTPPSTVFAAYNHLE-TKKELKVYRYFGHEYIPAFQTEKLA 310 (318)
T ss_dssp GGCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCSSCCHHHHHHHHH
T ss_pred ccCCCCEEEEEECCCCCcCHHHHHHHHHHcC-CCcEEEEECCCCCCCcHHHHHHHHH
Confidence 7889999999999999999999999999986 3689999999999876 54444443
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.95 E-value=2e-27 Score=181.36 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=163.4
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
....+..++.+.||.+|.+.++.|++...+.|+||++||.+... ...|...+..|+++||.|+++|+||++.+......
T Consensus 9 ~~~~~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~ 88 (260)
T d2hu7a2 9 IAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 88 (260)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHH
T ss_pred cCceEEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeecccccccccc
Confidence 34456678999999999999999887656789999999854322 22345778889999999999999999877543221
Q ss_pred C---CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 107 I---PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 107 ~---~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
. .......+|+.++++++.... +..++.++|+|+||.+++.++..+|+.+++++..++..........
T Consensus 89 ~~~~~~~~~~~~D~~~~~~~l~~~~-~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~-------- 159 (260)
T d2hu7a2 89 KIIGDPCGGELEDVSAAARWARESG-LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYEL-------- 159 (260)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTT-CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHHT--------
T ss_pred ccccccchhhhhhhccccccccccc-ccceeeccccccccccccchhccCCcccccccccccchhhhhhhcc--------
Confidence 1 112344678888888888754 5568999999999999999999999999999998886442210000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
....+. ... ...... . .+.+.. .+....+.++++|+|+++|++|.+
T Consensus 160 -------------------~~~~~~-~~~-~~~~~~--------~----~~~~~~-~~~~~~~~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 160 -------------------SDAAFR-NFI-EQLTGG--------S----REIMRS-RSPINHVDRIKEPLALIHPQNDSR 205 (260)
T ss_dssp -------------------CCHHHH-HHH-HHHHCS--------C----HHHHHH-TCGGGCGGGCCSCEEEEEETTCSS
T ss_pred -------------------cccccc-ccc-cccccc--------c----cccccc-cchhhcccccCCCceeeecccCce
Confidence 000000 000 000000 0 000010 123345678899999999999999
Q ss_pred cChHHHHHHHHHhcC--CCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 264 CDPACVEELYKRAAS--KDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
+|++.+..+++.+.. .+++++++||+||.+. ++..++.+.+.++
T Consensus 206 vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~f 253 (260)
T d2hu7a2 206 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFF 253 (260)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHH
Confidence 999999999988753 4578999999999875 5455555555544
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=7.3e-26 Score=163.89 Aligned_cols=175 Identities=13% Similarity=0.060 Sum_probs=116.6
Q ss_pred ceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 59 GVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 59 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
..||++||++++.. .+++.+++.|+++||.|+++|+||+|.+ ..+++++.+...+ .. ...+++++
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~--------~~~~~~~~l~~~~----~~--~~~~~~lv 67 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP--------RLEDWLDTLSLYQ----HT--LHENTYLV 67 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC--------CHHHHHHHHHTTG----GG--CCTTEEEE
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc--------hHHHHHHHHHHHH----hc--cCCCcEEE
Confidence 35999999998754 3457899999999999999999999864 2334444333332 22 55699999
Q ss_pred EechhhHHHHHHHHhcCCCcc--EEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWD--GLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~--~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
||||||.+++.++.++++... +++..++...... ..... . .+....
T Consensus 68 GhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~---~~~~~----------------~----~~~~~~--------- 115 (186)
T d1uxoa_ 68 AHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP---TLQML----------------D----EFTQGS--------- 115 (186)
T ss_dssp EETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT---TCGGG----------------G----GGTCSC---------
T ss_pred EechhhHHHHHHHHhCCccceeeEEeecccccccch---hhhhh----------------h----hhhccc---------
Confidence 999999999999999986543 3444443221110 00000 0 000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI- 294 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 294 (308)
.. .....++.+|+++++|++|+++|++.++.+++.+ ++++++++++||+..
T Consensus 116 ----------~~---------------~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~---~~~~~~~~~~gH~~~~ 167 (186)
T d1uxoa_ 116 ----------FD---------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLED 167 (186)
T ss_dssp ----------CC---------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCGG
T ss_pred ----------cc---------------ccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc---CCEEEEeCCCCCcCcc
Confidence 00 0111224679999999999999999999999987 579999999999876
Q ss_pred CC---chhhHHHhhhc
Q 035721 295 GE---PEENVELVFGE 307 (308)
Q Consensus 295 ~~---~~~~~~~i~~~ 307 (308)
+. -.++.+.+.++
T Consensus 168 ~~~~~~~~~~~~l~~~ 183 (186)
T d1uxoa_ 168 EGFTSLPIVYDVLTSY 183 (186)
T ss_dssp GTCSCCHHHHHHHHHH
T ss_pred ccCcccHHHHHHHHHH
Confidence 32 13455555443
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=3.3e-25 Score=174.53 Aligned_cols=229 Identities=18% Similarity=0.187 Sum_probs=150.2
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
++..++..+.+.||.+|++.++.|.+...+.|+||++||++.+.. ++. ....++++||.|+++|+||+|.|.......
T Consensus 52 ~~~~~~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~-~~~-~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~ 129 (322)
T d1vlqa_ 52 TVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPH-DWLFWPSMGYICFVMDTRGQGSGWLKGDTP 129 (322)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGG-GGCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred CeEEEEEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcC-cHH-HHHHHHhCCCEEEEeeccccCCCCCCcccc
Confidence 445566778889999999999998765566799999999887765 332 345678899999999999999986532110
Q ss_pred C------------------------CcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEE
Q 035721 108 P------------------------DLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLIL 162 (308)
Q Consensus 108 ~------------------------~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl 162 (308)
. .....+.|+..+++.+..... +..++.++|+|+||.+++.++...+ ++++++.
T Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~ 208 (322)
T d1vlqa_ 130 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLC 208 (322)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEE
T ss_pred ccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEE
Confidence 0 001234577777777766543 5568999999999999998888776 6898887
Q ss_pred eCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh
Q 035721 163 NGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL 242 (308)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (308)
..+...... ... ..... ... ........... ............ .+.
T Consensus 209 ~~~~~~~~~---------~~~----~~~~~------------~~~--~~~~~~~~~~~------~~~~~~~~~~~~-~d~ 254 (322)
T d1vlqa_ 209 DVPFLCHFR---------RAV----QLVDT------------HPY--AEITNFLKTHR------DKEEIVFRTLSY-FDG 254 (322)
T ss_dssp ESCCSCCHH---------HHH----HHCCC------------TTH--HHHHHHHHHCT------TCHHHHHHHHHT-TCH
T ss_pred eCCccccHH---------HHH----hhccc------------cch--hhHHhhhhcCc------chhhhHHHHhhh-hhH
Confidence 766432110 000 00000 000 00000000000 000000000000 123
Q ss_pred hhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 243 QGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 243 ~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
...+.++++|+|+++|++|.++|++.+..+++.++. +++++++|++||...
T Consensus 255 ~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~p~~~H~~~ 305 (322)
T d1vlqa_ 255 VNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGG 305 (322)
T ss_dssp HHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTT
T ss_pred HHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEECCCCCCCc
Confidence 344678899999999999999999999999998864 589999999999665
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=8e-24 Score=159.25 Aligned_cols=197 Identities=20% Similarity=0.149 Sum_probs=125.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc---chHHH
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL---NPVVE 115 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~---~~~~~ 115 (308)
..|..+.+ ..|++ ++|+||++||++++.. .|..+++.|++.||.|+++|+||||.|.......... .....
T Consensus 10 l~g~~~~~--~~p~~---~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~ 83 (238)
T d1ufoa_ 10 LAGLSVLA--RIPEA---PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYR 83 (238)
T ss_dssp ETTEEEEE--EEESS---CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHH
T ss_pred ECCEEEEe--cCCCC---CCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhh
Confidence 35655444 44543 4899999999999887 5578999999999999999999999987644321111 11111
Q ss_pred H-------HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 116 D-------AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 116 d-------~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+ +..++...... +..++.++|+|+||.+++.++..+|+ +++++.+.+.........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~--~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~-------------- 146 (238)
T d1ufoa_ 84 VALGFKEEARRVAEEAERR--FGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQ-------------- 146 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCT--------------
T ss_pred hHHhHHHHHHHHhhhcccc--CCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeecccccccc--------------
Confidence 1 22222222222 55699999999999999999999986 555554433222111000
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
............... ..........++|+++++|++|.+++.+.
T Consensus 147 ---------------~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~ 190 (238)
T d1ufoa_ 147 ---------------GQVVEDPGVLALYQA---------------------PPATRGEAYGGVPLLHLHGSRDHIVPLAR 190 (238)
T ss_dssp ---------------TCCCCCHHHHHHHHS---------------------CGGGCGGGGTTCCEEEEEETTCTTTTHHH
T ss_pred ---------------ccccccccccchhhh---------------------hhhhhhhhhcCCCeEEEEcCCCCccCHHH
Confidence 000000000000000 01111223346899999999999999999
Q ss_pred HHHHHHHhcC----CCCcEEEecCCccccc
Q 035721 269 VEELYKRAAS----KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 269 ~~~~~~~~~~----~~~~~~~~~~~gH~~~ 294 (308)
+..+++.+.. .++++++++|+||.+.
T Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~ 220 (238)
T d1ufoa_ 191 MEKTLEALRPHYPEGRLARFVEEGAGHTLT 220 (238)
T ss_dssp HHHHHHHHGGGCTTCCEEEEEETTCCSSCC
T ss_pred HHHHHHHHHhcCCCceEEEEEECCCCCccC
Confidence 9999988742 2467888999999886
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=1.3e-23 Score=159.91 Aligned_cols=235 Identities=14% Similarity=0.075 Sum_probs=148.9
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCc----cchHHHHHHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGE----SSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
++.++..+...||.+++|.++.|++- +++-|+||++||.++. ..+........++++||.|+.+|+||.+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~ 80 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 80 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence 35577888999999999999999863 2334899999995221 11111233445778899999999999876543
Q ss_pred cccc--CCC-cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 103 LVAH--IPD-LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 103 ~~~~--~~~-~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
.... ..+ -....+++.++++++..... +..++.++|+|+||.+++.++..+|+.+...+..++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 154 (258)
T d2bgra2 81 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY------ 154 (258)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS------
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccc------
Confidence 2110 001 12235667777777776543 5568999999999999999999999988887776664322110
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEe
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICH 257 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~ 257 (308)
...........+. ........ .. .+......++ ++|+++++
T Consensus 155 -~~~~~~~~~~~~~-------------~~~~~~~~---~~---------------------~~~~~~~~~~~~~P~li~h 196 (258)
T d2bgra2 155 -DSVYTERYMGLPT-------------PEDNLDHY---RN---------------------STVMSRAENFKQVEYLLIH 196 (258)
T ss_dssp -BHHHHHHHHCCCS-------------TTTTHHHH---HH---------------------SCSGGGGGGGGGSEEEEEE
T ss_pred -cccccchhccccc-------------chhhHHHh---hc---------------------ccccccccccccCChheee
Confidence 0000000000000 00000000 00 0111223333 47999999
Q ss_pred eCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 258 GGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
|++|..+|+..+.++++.+. +.+++++++|+++|.+. +....+.+.+.++
T Consensus 197 G~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~f 250 (258)
T d2bgra2 197 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 250 (258)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred ecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHH
Confidence 99999999999999988874 35689999999999875 4455555555544
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.91 E-value=6e-23 Score=153.36 Aligned_cols=193 Identities=15% Similarity=0.124 Sum_probs=140.6
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc----
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH---- 106 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---- 106 (308)
.+.+.+++.||.++......|.+ .+.|.||++|+..+... ..+.+++.|+++||.|+++|+.|.+........
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~--~~~P~vl~~h~~~G~~~-~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~ 79 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK--APAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS--SSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCC--CCceEEEEeCCCCCCCH-HHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHH
Confidence 35678899999999998888865 46899999997766555 446789999999999999999876654331110
Q ss_pred ----------CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC
Q 035721 107 ----------IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP 176 (308)
Q Consensus 107 ----------~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~ 176 (308)
..+.+....|+.+.++.+........++.++|+|+||.+++.++... .+.+.+.+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~-------- 149 (233)
T d1dina_ 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGL-------- 149 (233)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCG--------
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceecccccccc--------
Confidence 12344556788888888865432345899999999999999988654 3556554332100
Q ss_pred chhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEE
Q 035721 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 256 (308)
....+...++++|++++
T Consensus 150 ---------------------------------------------------------------~~~~~~~~~i~~Pvl~~ 166 (233)
T d1dina_ 150 ---------------------------------------------------------------EKQLNKVPEVKHPALFH 166 (233)
T ss_dssp ---------------------------------------------------------------GGGGGGGGGCCSCEEEE
T ss_pred ---------------------------------------------------------------ccchhhhhccCCcceee
Confidence 01113345788999999
Q ss_pred eeCCCcccChHHHHHHHHHhcC-CCCcEEEecCCccccc-CCchh
Q 035721 257 HGGDDVVCDPACVEELYKRAAS-KDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
+|++|..+|.+..+.+.+.+.. ++++++++||++|.+. ...+.
T Consensus 167 ~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~ 211 (233)
T d1dina_ 167 MGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSG 211 (233)
T ss_dssp EETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTT
T ss_pred ecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCcc
Confidence 9999999999998888877643 4578999999999877 44443
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.90 E-value=4.5e-22 Score=146.72 Aligned_cols=197 Identities=21% Similarity=0.226 Sum_probs=148.7
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccC---CCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGF---TGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~---~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
..+...+| +|...+..+. . .+++++|++||. +++.. .....+++.|.+.||.|+.+|+||.|.|.+..+.
T Consensus 3 v~i~g~~G-~Le~~~~~~~-~-~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~--- 76 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQPSK-E-KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH--- 76 (218)
T ss_dssp EEEEETTE-EEEEEEECCS-S-TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS---
T ss_pred EEEeCCCc-cEEEEEeCCC-C-CCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc---
Confidence 45667778 8988655433 2 457899999984 44432 2345788999999999999999999999876543
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
.....+|..++++++........+++++|+|+||.++..++.+.+ .+.+++++.+......
T Consensus 77 ~~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~------------------ 137 (218)
T d2i3da1 77 GAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD------------------ 137 (218)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC------------------
T ss_pred chhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc------------------
Confidence 344567888888888776434568999999999999999988876 4777887777533210
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
...+....+|+++++|++|.+++.+..
T Consensus 138 -----------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~ 164 (218)
T d2i3da1 138 -----------------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKDV 164 (218)
T ss_dssp -----------------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHH
T ss_pred -----------------------------------------------------hhhccccCCCceeeecccceecChHHH
Confidence 012344578999999999999999999
Q ss_pred HHHHHHhcC---CCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 270 EELYKRAAS---KDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 270 ~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
..+.+.+.. .+.++++++|++|++..+.+++.+.+.++|
T Consensus 165 ~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l 206 (218)
T d2i3da1 165 NGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYL 206 (218)
T ss_dssp HHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHH
Confidence 999888753 245899999999988876778888777653
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=3.5e-24 Score=153.26 Aligned_cols=167 Identities=13% Similarity=0.063 Sum_probs=121.4
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.++|||+||++++.. .|..+++.|.++||.++.+|.+|++.+...... +.+.+.+++.++++.. +..+++++
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~~l~~~i~~~~~~~-----~~~~v~lv 73 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN--NGPVLSRFVQKVLDET-----GAKKVDIV 73 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH--HHHHHHHHHHHHHHHH-----CCSCEEEE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCccccccccch--hhhhHHHHHHHHHHhc-----CCceEEEE
Confidence 356899999998877 678999999999999999999999988654332 3334444444444443 34499999
Q ss_pred EechhhHHHHHHHHhc--CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 138 SESLGGAIALYITLRQ--KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
||||||.++..++.++ +++|+++|+++++....... .+
T Consensus 74 GHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~---------------------------~l------------- 113 (179)
T d1ispa_ 74 AHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------------------AL------------- 113 (179)
T ss_dssp EETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---------------------------CC-------------
T ss_pred eecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh---------------------------hc-------------
Confidence 9999999999999876 57899999998753211000 00
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI- 294 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 294 (308)
........+|++.++|..|.++++..+ .+ ++++.+.+++++|...
T Consensus 114 ---------------------------~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l--~~~~~~~~~~~~H~~l~ 159 (179)
T d1ispa_ 114 ---------------------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RL--DGARNVQIHGVGHIGLL 159 (179)
T ss_dssp ---------------------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CC--BTSEEEEESSCCTGGGG
T ss_pred ---------------------------CCcccccCceEEEEEecCCcccCchhh-----cC--CCceEEEECCCCchhhc
Confidence 000123467999999999999998654 23 5788899999999988
Q ss_pred CCchhhHHHhhhc
Q 035721 295 GEPEENVELVFGE 307 (308)
Q Consensus 295 ~~~~~~~~~i~~~ 307 (308)
.+| ++.+.+.++
T Consensus 160 ~~~-~v~~~i~~~ 171 (179)
T d1ispa_ 160 YSS-QVNSLIKEG 171 (179)
T ss_dssp GCH-HHHHHHHHH
T ss_pred cCH-HHHHHHHHH
Confidence 766 466666554
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.89 E-value=3.8e-23 Score=158.83 Aligned_cols=212 Identities=16% Similarity=0.109 Sum_probs=131.8
Q ss_pred CCcceEEEEccCC-CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCCcchHHHHHHHHHHHHHHhcCCCC
Q 035721 56 KTLGVLCVVHGFT-GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVVEDAISFFDSFRARHAPDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~-~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~~~~ 132 (308)
..+|+++|+||+. +.+.+.|..+++.|... ++|+++|+||||.|+..... ..+++++++++.+.+.... +..
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~-~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~----~~~ 132 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEE-RDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA----GDA 132 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTT-CCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH----TTS
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCC-ceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhc----CCC
Confidence 4578999999963 22223567899999775 99999999999988764332 2367777777665544333 233
Q ss_pred CEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccc
Q 035721 133 PAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+++|+||||||.+|+.+|.+. ++++.++|++++....... .............
T Consensus 133 P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~-----~~~~~~~~~~~~~------------------ 189 (283)
T d2h7xa1 133 PVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQE-----PIEVWSRQLGEGL------------------ 189 (283)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCH-----HHHHTHHHHHHHH------------------
T ss_pred ceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCcccccc-----chhhhhhhhHHHh------------------
Confidence 999999999999999999864 4679999999985432211 0111111000000
Q ss_pred cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 209 EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
............+......... ........+++|+++++|++|..++.+....+.+.+. ...+++.++|
T Consensus 190 --------~~~~~~~~~~~~l~a~~~~~~~--~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~-~~~~~~~v~G 258 (283)
T d2h7xa1 190 --------FAGELEPMSDARLLAMGRYARF--LAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD-LPHTVADVPG 258 (283)
T ss_dssp --------HHTCSSCCCHHHHHHHHHHHHH--HHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS-SCSEEEEESS
T ss_pred --------hcccccccccHHHHHHHHHHHH--HhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEEEcC
Confidence 0000000000111111111111 1112346789999999999999998887766665553 3468899995
Q ss_pred Cccccc--CCchhhHHHhhhc
Q 035721 289 MWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 289 ~gH~~~--~~~~~~~~~i~~~ 307 (308)
||+.+ ++++.+++.|.++
T Consensus 259 -~H~~ml~e~~~~vA~~i~~~ 278 (283)
T d2h7xa1 259 -DHFTMMRDHAPAVAEAVLSW 278 (283)
T ss_dssp -CTTHHHHTTHHHHHHHHHHH
T ss_pred -CCcccccCCHHHHHHHHHHH
Confidence 89855 6788888887765
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=4.1e-23 Score=157.07 Aligned_cols=224 Identities=16% Similarity=0.140 Sum_probs=138.1
Q ss_pred cCCCcEEEEEEecCCCC--CCCcceEEEEccCCCcc----chHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCC
Q 035721 38 NSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGES----SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPD 109 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~ 109 (308)
..||.+|.+.++.|.+- +++.|+||++||.++.. .+........|+++||.|+++|+||.+.+...... ...
T Consensus 9 ~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~ 88 (258)
T d1xfda2 9 EIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRR 88 (258)
T ss_dssp EETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTC
T ss_pred eeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhcc
Confidence 35999999999998763 23358999999963221 11112234568889999999999986543221110 001
Q ss_pred -cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 110 -LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 110 -~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
.....+|+.++++++..+.. +..++.++|+|+||.+++.++...++ .+...+.+.+....... .....
T Consensus 89 ~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 162 (258)
T d1xfda2 89 LGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY------ASAFS 162 (258)
T ss_dssp TTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS------BHHHH
T ss_pred chhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecc------ccccc
Confidence 12346788889998887654 67799999999999999988876654 35555555553221100 00000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCC-CCcceEEEeeCCCc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE-VEVPMLICHGGDDV 262 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~ 262 (308)
.... ..... . ...+... .....+.+ .++|+|+++|+.|.
T Consensus 163 ~~~~-~~~~~---------~----------------~~~~~~~--------------s~~~~~~~~~~~p~Li~hG~~D~ 202 (258)
T d1xfda2 163 ERYL-GLHGL---------D----------------NRAYEMT--------------KVAHRVSALEEQQFLIIHPTADE 202 (258)
T ss_dssp HHHH-CCCSS---------C----------------CSSTTTT--------------CTHHHHTSCCSCEEEEEEETTCS
T ss_pred cccc-ccccc---------c----------------hHHhhcc--------------chhhhhhhhhcccccccccCCCC
Confidence 0000 00000 0 0000000 00111223 36899999999999
Q ss_pred ccChHHHHHHHHHhcC--CCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 263 VCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
.+|++.+.++.+.+.. .+++++++|+++|.+. +....+.+.++++
T Consensus 203 ~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f 251 (258)
T d1xfda2 203 KIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINF 251 (258)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHH
Confidence 9999999998887642 4678999999999876 3444455555554
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.88 E-value=5e-22 Score=150.60 Aligned_cols=175 Identities=18% Similarity=0.172 Sum_probs=128.7
Q ss_pred EecCCC-CCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHH
Q 035721 48 WWTPLP-PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 48 ~~~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
+|.|.+ ++.+.|+||++||++++... +..+++.|+++||.|+++|++|++.. ......|+.++++.+..
T Consensus 41 ly~P~~~~~g~~P~Vv~~HG~~g~~~~-~~~~a~~lA~~Gy~V~~~d~~~~~~~---------~~~~~~d~~~~~~~l~~ 110 (260)
T d1jfra_ 41 IYYPTSTADGTFGAVVISPGFTAYQSS-IAWLGPRLASQGFVVFTIDTNTTLDQ---------PDSRGRQLLSALDYLTQ 110 (260)
T ss_dssp EEEESCCTTCCEEEEEEECCTTCCGGG-TTTHHHHHHTTTCEEEEECCSSTTCC---------HHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCccEEEEECCCCCCHHH-HHHHHHHHHhCCCEEEEEeeCCCcCC---------chhhHHHHHHHHHHHHh
Confidence 444543 22456899999999988874 46789999999999999999987643 23445677777777655
Q ss_pred hc----C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCC
Q 035721 127 RH----A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS 201 (308)
Q Consensus 127 ~~----~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
.. . +..++.++|||+||.+++.++...+ +++++|.+++....
T Consensus 111 ~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~-------------------------------- 157 (260)
T d1jfra_ 111 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD-------------------------------- 157 (260)
T ss_dssp TSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC--------------------------------
T ss_pred hhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc--------------------------------
Confidence 31 1 5678999999999999999998876 68888887774221
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHHHHHhcC-C
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEELYKRAAS-K 279 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-~ 279 (308)
..+.++++|+|+++|++|.++|++. .+.+++.++. .
T Consensus 158 ------------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~ 195 (260)
T d1jfra_ 158 ------------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSL 195 (260)
T ss_dssp ------------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTS
T ss_pred ------------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCC
Confidence 1124567899999999999999865 5556665532 3
Q ss_pred CCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 280 DKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 280 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
..+++.++|++|... .....+.+.++.+
T Consensus 196 ~~~~~~i~ga~H~~~~~~~~~~~~~~~~w 224 (260)
T d1jfra_ 196 DKAYLELRGASHFTPNTSDTTIAKYSISW 224 (260)
T ss_dssp CEEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred CEEEEEECCCccCCCCCChHHHHHHHHHH
Confidence 467899999999988 5445555555443
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.88 E-value=1.4e-22 Score=158.95 Aligned_cols=255 Identities=13% Similarity=0.062 Sum_probs=154.2
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccc--hHHHHHH---HHHHHcCCeEEEecCCCCcCCCCcc------------
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WIVQLTA---VLFAKSGFATCAIDHQGHGFSDGLV------------ 104 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~------------ 104 (308)
.+|.|..||..+. ...++||++|++.+++. .||..++ +.|-...|.||++|..|.|.++..+
T Consensus 29 ~~laY~t~G~ln~-~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~ 107 (376)
T d2vata1 29 VPVAYKSWGRMNV-SRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRP 107 (376)
T ss_dssp EEEEEEEESCCCT-TSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CB
T ss_pred ceEEEEeecccCC-CCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCc
Confidence 5788999997654 34688999999988764 3455442 2343346999999999877543211
Q ss_pred ----ccCCCcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh
Q 035721 105 ----AHIPDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL 179 (308)
Q Consensus 105 ----~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 179 (308)
-+..++.++++.-..++++++++ ++ .|+|.||||+.|+.+|..+|++|+++|.+++........ ...
T Consensus 108 yg~~FP~~ti~D~v~aq~~ll~~LGI~-----~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~---~a~ 179 (376)
T d2vata1 108 YGAKFPRTTIRDDVRIHRQVLDRLGVR-----QIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWC---AAW 179 (376)
T ss_dssp CGGGCCCCCHHHHHHHHHHHHHHHTCC-----CEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHH---HHH
T ss_pred ccccCCcchhHHHHHHHHHHHHHhCcc-----eEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHH---HHH
Confidence 01246678888888888888887 76 588999999999999999999999999998865432100 000
Q ss_pred hhhHHHhhhhCCCcccccCCC-CCCCccc-----------cc-HHHHHH-------------------------------
Q 035721 180 EHLLFTVAWLVPTWRVVPTRG-SLPMVSF-----------KE-EWKRKL------------------------------- 215 (308)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~-~~~~~~------------------------------- 215 (308)
.......-..-+.|....... ....... .. ......
T Consensus 180 ~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~ 259 (376)
T d2vata1 180 FETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSH 259 (376)
T ss_dssp HHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-----------------------
T ss_pred HHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccccccccc
Confidence 000000000001000000000 0000000 00 000000
Q ss_pred -----------Hhh-CCCCCCCcchHHHHHHHHHHHH----------HhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 216 -----------ALS-SPRRPVARPRAATALELLRVSR----------DLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 216 -----------~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
+.. ....+........+..+.+.+. ++.+.+++|++|+|+|.++.|.++|++..++++
T Consensus 260 ~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a 339 (376)
T d2vata1 260 RAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMG 339 (376)
T ss_dssp ----CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHH
Confidence 000 0000000001111122222211 234458899999999999999999999999999
Q ss_pred HHhcCCCCcEEEec-CCccccc-CCchhhHHHhhhc
Q 035721 274 KRAASKDKTLSIYP-GMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 274 ~~~~~~~~~~~~~~-~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.+ +++++.+++ ..||..+ .+++.+.+.|.++
T Consensus 340 ~~l--~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~F 373 (376)
T d2vata1 340 RSI--PNSRLCVVDTNEGHDFFVMEADKVNDAVRGF 373 (376)
T ss_dssp HHS--TTEEEEECCCSCGGGHHHHTHHHHHHHHHHH
T ss_pred Hhc--CCCeEEEECCCCCccccccCHHHHHHHHHHH
Confidence 999 689999998 6899888 7788888887765
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.5e-22 Score=151.32 Aligned_cols=203 Identities=10% Similarity=0.022 Sum_probs=119.1
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+++|||+||++++.. .|..+++.|. +|.|+++|++|+|. .++++.+.++.+. +..+++|+
T Consensus 17 ~~~l~~lhg~~g~~~-~~~~la~~L~--~~~v~~~~~~g~~~-------------~a~~~~~~i~~~~----~~~~~~lv 76 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFIEEED-------------RLDRYADLIQKLQ----PEGPLTLF 76 (230)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHCT--TEEEEEECCCCSTT-------------HHHHHHHHHHHHC----CSSCEEEE
T ss_pred CCeEEEEcCCCCCHH-HHHHHHHHCC--CCEEeccCcCCHHH-------------HHHHHHHHHHHhC----CCCcEEEE
Confidence 789999999999887 6689999994 69999999998763 3555555555543 33489999
Q ss_pred EechhhHHHHHHHHhcCCCccE---EEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWDG---LILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~---~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
||||||.+|+.+|.++|+++.. ++.+.+........................... ...........
T Consensus 77 GhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 145 (230)
T d1jmkc_ 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRD-----------NEALNSEAVKH 145 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTT-----------CSGGGSHHHHH
T ss_pred eeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhcccc-----------ccccccHHHHH
Confidence 9999999999999988765544 444444322111110000000001111110000 00001111110
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.. .......... .........+++|+++++|++|..++... ..+.+... .+.+++.++ +||+.+
T Consensus 146 ~~------------~~~~~~~~~~-~~~~~~~~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~-~~~~~~~i~-g~H~~m 209 (230)
T d1jmkc_ 146 GL------------KQKTHAFYSY-YVNLISTGQVKADIDLLTSGADFDIPEWL-ASWEEATT-GAYRMKRGF-GTHAEM 209 (230)
T ss_dssp HH------------HHHHHHHHHH-HHHCCCCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBS-SCEEEEECS-SCGGGT
T ss_pred HH------------HHHHHHHHHh-hhcccccccccCcceeeeecCCcccchhH-HHHHHhcc-CCcEEEEEc-CCChhh
Confidence 00 0001111111 22234467889999999999999887543 33344443 467888898 699988
Q ss_pred -CCc--hhhHHHhhhc
Q 035721 295 -GEP--EENVELVFGE 307 (308)
Q Consensus 295 -~~~--~~~~~~i~~~ 307 (308)
++| +++++.|.++
T Consensus 210 l~~~~~~~va~~I~~~ 225 (230)
T d1jmkc_ 210 LQGETLDRNAGILLEF 225 (230)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHH
Confidence 655 7778777665
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1e-22 Score=156.89 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=79.1
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
..++|.+|.+...+. .++++|||+||++++.. .|+.+++.| +++|+++|+||+|.|+ ++++.+++
T Consensus 8 ~~~~~~~l~~l~~~~----~~~~Pl~l~Hg~~gs~~-~~~~l~~~L---~~~v~~~d~~g~~~~~-------~~~~~a~~ 72 (286)
T d1xkta_ 8 VNPEGPTLMRLNSVQ----SSERPLFLVHPIEGSTT-VFHSLASRL---SIPTYGLQCTRAAPLD-------SIHSLAAY 72 (286)
T ss_dssp CCTTSCSEEECCCCC----CCSCCEEEECCTTCCCG-GGHHHHHTC---SSCEEEECCCTTSCCS-------CHHHHHHH
T ss_pred cCCCCCEEEEecCCC----CCCCeEEEECCCCccHH-HHHHHHHHc---CCeEEEEeCCCCCCCC-------CHHHHHHH
Confidence 356666666543222 23566999999999987 668888877 5899999999999875 55666776
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
....+..+. +..+++++||||||.+|+.+|.++|+++.++++++.
T Consensus 73 ~~~~~~~~~----~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 73 YIDCIRQVQ----PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHHC----CSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred HHHHHHHhc----CCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 665555443 334999999999999999999999999888877664
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7.8e-22 Score=146.77 Aligned_cols=172 Identities=17% Similarity=0.158 Sum_probs=115.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCC---------C-----CccccCCC---cchHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFS---------D-----GLVAHIPD---LNPVVEDAI 118 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s---------~-----~~~~~~~~---~~~~~~d~~ 118 (308)
+..++|||+||+|++.. .|..+...+...++.+++++-|.+..+ . .......+ +++..+.+.
T Consensus 19 ~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 45679999999998876 455666777677899999886533111 0 00000001 222334445
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccC
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPT 198 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (308)
.+++.......+.++++++|+|+||.+|+.++.++|++++++|.+++........
T Consensus 98 ~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~------------------------- 152 (229)
T d1fj2a_ 98 ALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------------------------- 152 (229)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------------------------
T ss_pred HHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccc-------------------------
Confidence 5555443321166799999999999999999999999999999998743211100
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc-
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA- 277 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~- 277 (308)
.... ....+.++|++++||++|.++|.+.+++..+.+.
T Consensus 153 ----~~~~-------------------------------------~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~ 191 (229)
T d1fj2a_ 153 ----PQGP-------------------------------------IGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKT 191 (229)
T ss_dssp ----CSSC-------------------------------------CCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred ----cccc-------------------------------------cccccccCceeEEEcCCCCeeCHHHHHHHHHHHHh
Confidence 0000 0011235799999999999999998888777663
Q ss_pred ---CCCCcEEEecCCccccc
Q 035721 278 ---SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 278 ---~~~~~~~~~~~~gH~~~ 294 (308)
..++++++++++||.+.
T Consensus 192 ~~~~~~v~~~~~~g~gH~i~ 211 (229)
T d1fj2a_ 192 LVNPANVTFKTYEGMMHSSC 211 (229)
T ss_dssp HSCGGGEEEEEETTCCSSCC
T ss_pred cCCCCceEEEEeCCCCCccC
Confidence 23578889999999876
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.86 E-value=3.6e-21 Score=149.78 Aligned_cols=256 Identities=12% Similarity=0.056 Sum_probs=154.7
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccch--------HHHHHH---HHHHHcCCeEEEecCCCCcCCCCccc---
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--------IVQLTA---VLFAKSGFATCAIDHQGHGFSDGLVA--- 105 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--------~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--- 105 (308)
++.+|.|..||..+. ...++||++|++.+++.. ||+.++ ..|-...|.|+++|..|.|.++..+.
T Consensus 22 ~~~~laY~t~G~ln~-~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~ 100 (357)
T d2b61a1 22 SYINVAYQTYGTLND-EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 100 (357)
T ss_dssp CSEEEEEEEESCCCT-TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred CCceEEEEeecccCC-CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCC
Confidence 357899999997665 345899999999887542 455442 23433459999999999765432111
Q ss_pred -----------cCCCcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC
Q 035721 106 -----------HIPDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF 173 (308)
Q Consensus 106 -----------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 173 (308)
...++.++++.-..+++++++. ++ .++|.||||+.|+.+|.++|++|+++|.+++........
T Consensus 101 p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~-----~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~ 175 (357)
T d2b61a1 101 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS-----HLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEA 175 (357)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC-----CEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHH
T ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHHhCcc-----eEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhH
Confidence 1246677777778888888777 77 577999999999999999999999999998864322100
Q ss_pred CCCchhhhhHHHhhhhCCCcccccCC-------------------------------------CCCCCcccccHHHHHHH
Q 035721 174 KPPWPLEHLLFTVAWLVPTWRVVPTR-------------------------------------GSLPMVSFKEEWKRKLA 216 (308)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~ 216 (308)
..........-..-+.+...... .......+....+....
T Consensus 176 ---~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~ 252 (357)
T d2b61a1 176 ---IGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQ 252 (357)
T ss_dssp ---HHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHH
Confidence 00000000000001111100000 00000001000000000
Q ss_pred hhCCCCCCCcchHHHHHHHHHHHH---------HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEE
Q 035721 217 LSSPRRPVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSI 285 (308)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~ 285 (308)
... +........+..+.+.+. ++.+.+++|++|+|+|..+.|.++|++..+.+++.++. .++++++
T Consensus 253 g~k---f~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~ 329 (357)
T d2b61a1 253 GKK---FLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYE 329 (357)
T ss_dssp HHH---HHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHH---HHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEE
Confidence 000 000011222222222221 23345889999999999999999999999999998853 3568888
Q ss_pred ecC-Cccccc-CCchhhHHHhhhc
Q 035721 286 YPG-MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 286 ~~~-~gH~~~-~~~~~~~~~i~~~ 307 (308)
++. .||.-+ .+.+++.+.|.++
T Consensus 330 I~S~~GHdafL~e~~~~~~~I~~f 353 (357)
T d2b61a1 330 FPSDYGHDAFLVDYDQFEKRIRDG 353 (357)
T ss_dssp ECCTTGGGHHHHCHHHHHHHHHHH
T ss_pred ECCCCCccccCcCHHHHHHHHHHH
Confidence 886 599988 7788887777654
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.85 E-value=8.2e-21 Score=138.81 Aligned_cols=171 Identities=18% Similarity=0.114 Sum_probs=121.6
Q ss_pred ecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc-----cccCCCcch---HHHHHHHH
Q 035721 49 WTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL-----VAHIPDLNP---VVEDAISF 120 (308)
Q Consensus 49 ~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-----~~~~~~~~~---~~~d~~~~ 120 (308)
+.|... +++|+||++||++++.. .+..+++.+.+ ++.|++++.+..+..... .....+.++ ..+++..+
T Consensus 6 ~~~~~~-~~~P~vi~lHG~g~~~~-~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (202)
T d2h1ia1 6 FQKGKD-TSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEF 82 (202)
T ss_dssp EECCSC-TTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHH
T ss_pred CCCCCC-CCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHH
Confidence 344443 56899999999998876 45678888875 699999876543322110 000012222 33456666
Q ss_pred HHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC
Q 035721 121 FDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR 199 (308)
Q Consensus 121 l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (308)
++.+..... +..++.++|+|+||.+++.++.++|+++.+++++++......
T Consensus 83 i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~---------------------------- 134 (202)
T d2h1ia1 83 LDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG---------------------------- 134 (202)
T ss_dssp HHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS----------------------------
T ss_pred HHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc----------------------------
Confidence 666655544 778999999999999999999999999999999887533110
Q ss_pred CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC
Q 035721 200 GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279 (308)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 279 (308)
.........|+++++|++|+++|++.++++.+.+...
T Consensus 135 -------------------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 135 -------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp -------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred -------------------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHHC
Confidence 0111234579999999999999999999999888643
Q ss_pred --CCcEEEecCCccccc
Q 035721 280 --DKTLSIYPGMWHQLI 294 (308)
Q Consensus 280 --~~~~~~~~~~gH~~~ 294 (308)
+++++.++ +||.+.
T Consensus 172 g~~~~~~~~~-ggH~~~ 187 (202)
T d2h1ia1 172 NANVTMHWEN-RGHQLT 187 (202)
T ss_dssp TCEEEEEEES-STTSCC
T ss_pred CCCEEEEEEC-CCCcCC
Confidence 46888888 489775
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.85 E-value=3.6e-21 Score=141.20 Aligned_cols=176 Identities=15% Similarity=0.061 Sum_probs=119.7
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-----cCCCCccccCCCcch---H
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-----GFSDGLVAHIPDLNP---V 113 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-----G~s~~~~~~~~~~~~---~ 113 (308)
..+.|+..++.. +++|+||++||++++.. .|..+++.|.+ ++.+++++.+.. +..........+... .
T Consensus 9 ~~~~~~~~~~~~--~~~p~vv~lHG~g~~~~-~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (209)
T d3b5ea1 9 LAFPYRLLGAGK--ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAE 84 (209)
T ss_dssp SSSCEEEESTTS--SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CcceeEecCCCC--CCCCEEEEEcCCCCCHH-HHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHH
Confidence 345566665443 46899999999998877 55788888876 589998875421 111111111112222 3
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
++++.++|+.+..+.. +.++++++|||+||.+++.++.++|+++++++++++......
T Consensus 85 ~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~--------------------- 143 (209)
T d3b5ea1 85 TAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH--------------------- 143 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS---------------------
T ss_pred HHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc---------------------
Confidence 4455566666655544 677999999999999999999999999999999988532110
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHH
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEEL 272 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 272 (308)
.......++|+++++|++|++++ +.++++
T Consensus 144 --------------------------------------------------~~~~~~~~~p~~~~~G~~D~~~~-~~~~~~ 172 (209)
T d3b5ea1 144 --------------------------------------------------VPATDLAGIRTLIIAGAADETYG-PFVPAL 172 (209)
T ss_dssp --------------------------------------------------CCCCCCTTCEEEEEEETTCTTTG-GGHHHH
T ss_pred --------------------------------------------------ccccccccchheeeeccCCCccC-HHHHHH
Confidence 00112346799999999999987 455566
Q ss_pred HHHhcC--CCCcEEEecCCccccc
Q 035721 273 YKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 273 ~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.+.. .+++++++++ ||.+.
T Consensus 173 ~~~l~~~G~~v~~~~~~g-gH~i~ 195 (209)
T d3b5ea1 173 VTLLSRHGAEVDARIIPS-GHDIG 195 (209)
T ss_dssp HHHHHHTTCEEEEEEESC-CSCCC
T ss_pred HHHHHHCCCCeEEEEECC-CCCCC
Confidence 666542 3578999986 79876
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.85 E-value=1.5e-20 Score=146.60 Aligned_cols=255 Identities=13% Similarity=0.115 Sum_probs=156.1
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccc------------hHHHHHH---HHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS------------WIVQLTA---VLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
+.+|.|..||..+. ...++||++|++.+++. .||+.++ ..|-.+-|.||++|..|.|.|+.++.
T Consensus 26 ~~~l~Y~t~G~ln~-~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~ 104 (362)
T d2pl5a1 26 PVVIAYETYGTLSS-SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 104 (362)
T ss_dssp SEEEEEEEEECCCT-TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred CceEEEEeeeccCC-CCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcc
Confidence 56899999997655 34589999999988742 2444332 23333459999999999877644221
Q ss_pred --------------cCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 106 --------------HIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 106 --------------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
...++.++++.-..++++++++ ++. |+|.||||+.|+.+|.++|+.|+++|.+++.....
T Consensus 105 s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~-----~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s 179 (362)
T d2pl5a1 105 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE-----KLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHS 179 (362)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS-----SEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCC
T ss_pred ccccccccccCcCCccchhHHHHHHHHHHHHHhCcC-----eeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccC
Confidence 1135566777777777877776 666 88999999999999999999999999998865432
Q ss_pred cCCCCCchhhhhHHHhh---hhCCCcccccCCCCCCCc-----------ccccH-HHHHHH-------------------
Q 035721 171 QKFKPPWPLEHLLFTVA---WLVPTWRVVPTRGSLPMV-----------SFKEE-WKRKLA------------------- 216 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~------------------- 216 (308)
. ....+..... ..-+.+........-... .+..+ ......
T Consensus 180 ~------~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~y 253 (362)
T d2pl5a1 180 A------MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSY 253 (362)
T ss_dssp H------HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGG
T ss_pred H------HHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHH
Confidence 1 0111111100 001111100000000000 00000 000010
Q ss_pred -hhCCCCCCCcchHHHHHHHHHHH--------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC--CCcEEE
Q 035721 217 -LSSPRRPVARPRAATALELLRVS--------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK--DKTLSI 285 (308)
Q Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~ 285 (308)
...............+..+.+.. .++.+.+++|++|+|+|..+.|.++|++..+.+++.+++. ++++++
T Consensus 254 l~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~e 333 (362)
T d2pl5a1 254 LIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVE 333 (362)
T ss_dssp GGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEE
Confidence 00111112222233333333322 2344568999999999999999999999999999999642 456777
Q ss_pred ec-CCccccc-CCchhhHHHhhhc
Q 035721 286 YP-GMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 286 ~~-~~gH~~~-~~~~~~~~~i~~~ 307 (308)
++ ..||.-+ .+.+++.+.|.++
T Consensus 334 I~S~~GHdaFL~e~~~~~~~I~~F 357 (362)
T d2pl5a1 334 LQSGEGHDSFLLKNPKQIEILKGF 357 (362)
T ss_dssp ECCCBSSGGGGSCCHHHHHHHHHH
T ss_pred eCCCCCcchhccCHHHHHHHHHHH
Confidence 76 5799998 8888888887765
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=4.3e-20 Score=140.72 Aligned_cols=207 Identities=12% Similarity=0.051 Sum_probs=125.0
Q ss_pred CCcceEEEEccCCC-----ccchH---HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTG-----ESSWI---VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~-----~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
.++|+||++||.+. +...+ .+.+++.+.+.||.|+++|+|..+.. .+....+|+.+.++++...
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~--------~~~~~~~d~~~~~~~l~~~ 100 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNITRLVKE 100 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcch--------hhhHHHHhhhhhhhccccc
Confidence 45899999999542 11111 23345556678999999999965432 4556678888888888766
Q ss_pred cCCCCCEEEEEechhhHHHHHHHHhcCCCcc-----------------EEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 128 HAPDLPAFLYSESLGGAIALYITLRQKGAWD-----------------GLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 128 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~-----------------~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
. +..+++++|||+||.+++.++...++... ..+...+.... ...... .
T Consensus 101 ~-~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~ 165 (263)
T d1vkha_ 101 K-GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL----------KELLIE----Y 165 (263)
T ss_dssp H-TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH----------HHHHHH----C
T ss_pred c-cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccc----------hhhhhh----c
Confidence 5 67799999999999999999887664321 11111111000 000000 0
Q ss_pred CCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHH
Q 035721 191 PTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVE 270 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 270 (308)
+ .................... .... . ......+.++.+|+++++|++|.++|++.+.
T Consensus 166 ~---------------~~~~~~~~~~~~~~~~~~~~-~~~~-~------~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~ 222 (263)
T d1vkha_ 166 P---------------EYDCFTRLAFPDGIQMYEEE-PSRV-M------PYVKKALSRFSIDMHLVHSYSDELLTLRQTN 222 (263)
T ss_dssp G---------------GGHHHHHHHCTTCGGGCCCC-HHHH-H------HHHHHHHHHHTCEEEEEEETTCSSCCTHHHH
T ss_pred c---------------ccchhhhccccccccccccc-cccc-C------ccccccccccCCCeeeeecCCCcccCHHHHH
Confidence 0 00000000000000000000 0000 0 0111223456789999999999999999999
Q ss_pred HHHHHhcC--CCCcEEEecCCcccccCCchhhHHHhhhcC
Q 035721 271 ELYKRAAS--KDKTLSIYPGMWHQLIGEPEENVELVFGEM 308 (308)
Q Consensus 271 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~i~~~i 308 (308)
.+.+.+.. .+++++++++++|......+++.+.|++.|
T Consensus 223 ~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~~~~~~i~~~i 262 (263)
T d1vkha_ 223 CLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDNI 262 (263)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSGGGGGGCHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEEEECCCCchhhhcChHHHHHHHHhh
Confidence 99988753 357899999999987744466888888765
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.83 E-value=9.1e-20 Score=133.24 Aligned_cols=169 Identities=15% Similarity=0.136 Sum_probs=118.5
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-----cCCCc---chHHHHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-----HIPDL---NPVVEDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~---~~~~~d~~~~l~~~~~~ 127 (308)
+++|+||++||++++.. .|..+.+.|.+ ++.|+.++.+..+....... ...+. ...++++..+++.....
T Consensus 15 ~~~P~vi~lHG~G~~~~-~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 92 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDEN-QFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 92 (203)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhc
Confidence 45899999999998876 55678888875 58999998765443322110 01122 22234444444443333
Q ss_pred cCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccc
Q 035721 128 HAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207 (308)
Q Consensus 128 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (308)
. +..+++++|+|+||.+++.++.++|+.+.++++.++.......
T Consensus 93 ~-~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~----------------------------------- 136 (203)
T d2r8ba1 93 Y-QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK----------------------------------- 136 (203)
T ss_dssp H-TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC-----------------------------------
T ss_pred C-CCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc-----------------------------------
Confidence 2 6779999999999999999999999999999999985432100
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEE
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSI 285 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~ 285 (308)
........|+++++|++|.++|++.++++.+.+.. -++++++
T Consensus 137 ------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ 180 (203)
T d2r8ba1 137 ------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVW 180 (203)
T ss_dssp ------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEE
T ss_pred ------------------------------------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 00122356999999999999999999999988753 3468899
Q ss_pred ecCCccccc-CCchh
Q 035721 286 YPGMWHQLI-GEPEE 299 (308)
Q Consensus 286 ~~~~gH~~~-~~~~~ 299 (308)
+++ ||.+. +.-++
T Consensus 181 ~~g-gH~~~~~~~~~ 194 (203)
T d2r8ba1 181 HPG-GHEIRSGEIDA 194 (203)
T ss_dssp ESS-CSSCCHHHHHH
T ss_pred ECC-CCcCCHHHHHH
Confidence 985 79876 44333
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.83 E-value=1.3e-19 Score=136.71 Aligned_cols=185 Identities=12% Similarity=0.018 Sum_probs=128.5
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCcc--chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGES--SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
...+|.|++ .+.|+||++||.+... ...+..++..|+++||.|+.+|+|..+. .++.+.++|+.++++
T Consensus 51 ~lDiy~P~~--~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~--------~~~p~~~~d~~~a~~ 120 (261)
T d2pbla1 51 KFDLFLPEG--TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE--------VRISEITQQISQAVT 120 (261)
T ss_dssp EEEEECCSS--SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT--------SCHHHHHHHHHHHHH
T ss_pred EEEEeccCC--CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccc--------ccCchhHHHHHHHHH
Confidence 445576765 4689999999965321 1234568889999999999999996433 267778899999999
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcC------CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccc
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQK------GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVV 196 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (308)
++..+ .+.+++|+|||.||.++..++.... ..+++++.+++..........
T Consensus 121 ~~~~~--~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 177 (261)
T d2pbla1 121 AAAKE--IDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT--------------------- 177 (261)
T ss_dssp HHHHH--SCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS---------------------
T ss_pred HHHhc--ccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh---------------------
Confidence 99887 5679999999999999987765432 357888888876553311000
Q ss_pred cCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHH
Q 035721 197 PTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKR 275 (308)
Q Consensus 197 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 275 (308)
.....+ .+.... .. ........+...|+++++|++|..++.+.++.+.+.
T Consensus 178 -----~~~~~~~~~~~~~-----------------------~~-~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~ 228 (261)
T d2pbla1 178 -----SMNEKFKMDADAA-----------------------IA-ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEA 228 (261)
T ss_dssp -----TTHHHHCCCHHHH-----------------------HH-TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHH
T ss_pred -----hhcccccCCHHHH-----------------------HH-hCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHH
Confidence 000000 000000 00 011233456789999999999998888899999999
Q ss_pred hcCCCCcEEEecCCccccc
Q 035721 276 AASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 276 ~~~~~~~~~~~~~~gH~~~ 294 (308)
+ +++.+++++.+|+-.
T Consensus 229 l---~~~~~~~~~~~HF~v 244 (261)
T d2pbla1 229 W---DADHVIAFEKHHFNV 244 (261)
T ss_dssp H---TCEEEEETTCCTTTT
T ss_pred h---CCCceEeCCCCchhH
Confidence 8 468899999999643
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=7.5e-21 Score=124.21 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=80.7
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
-+...+|.+|+|...+. .|+|||+||.... | .+.|. ++|+|+++|+||||.|+.++ ++.++++
T Consensus 4 ~~~~~~G~~l~y~~~G~------G~pvlllHG~~~~----w---~~~L~-~~yrvi~~DlpG~G~S~~p~---~s~~~~a 66 (122)
T d2dsta1 4 GYLHLYGLNLVFDRVGK------GPPVLLVAEEASR----W---PEALP-EGYAFYLLDLPGYGRTEGPR---MAPEELA 66 (122)
T ss_dssp EEEEETTEEEEEEEECC------SSEEEEESSSGGG----C---CSCCC-TTSEEEEECCTTSTTCCCCC---CCHHHHH
T ss_pred eEEEECCEEEEEEEEcC------CCcEEEEeccccc----c---ccccc-CCeEEEEEeccccCCCCCcc---cccchhH
Confidence 45578999999999874 4679999995322 2 33454 47999999999999998642 5889999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
+++.++++.++.. +++++||||||.+++++++..+
T Consensus 67 ~~i~~ll~~L~i~-----~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 67 HFVAGFAVMMNLG-----APWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp HHHHHHHHHTTCC-----SCEEEECGGGGGGHHHHHHTTC
T ss_pred HHHHHHHHHhCCC-----CcEEEEeCccHHHHHHHHhhcc
Confidence 9999999999887 9999999999999999998654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.80 E-value=2.1e-23 Score=163.67 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=126.4
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHH-------HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ-------LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
+++..+.|.++ .+++|||+||++.++. .|+ .+++.+.++||+|+++|+||||.|...... .+...+.++
T Consensus 46 ~~v~~~~p~~~--~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~-~~~~~~~~~ 121 (318)
T d1qlwa_ 46 MYVRYQIPQRA--KRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA-INAVKLGKA 121 (318)
T ss_dssp EEEEEEEETTC--CSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHH-HHHHHTTSS
T ss_pred EEEEEECCCCC--CCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcccc-CCHHHHHHH
Confidence 44444556543 3566899999998876 443 367889999999999999999999764332 123333333
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCc-cEEEEeCCcCCCCcCCCCCchhh-hhHHHhhhhCCCcc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAW-DGLILNGAMCGISQKFKPPWPLE-HLLFTVAWLVPTWR 194 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v-~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 194 (308)
+.+.++.+.. ...+..++|||+||.++..++....... ..+++.++............... ..........+...
T Consensus 122 ~~~~l~~~~~---~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (318)
T d1qlwa_ 122 PASSLPDLFA---AGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVL 198 (318)
T ss_dssp CGGGSCCCBC---CCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHhh---cccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhccccc
Confidence 3333332221 1225667899999998887776554322 22222222222211111111111 11111222111111
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-----H
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-----V 269 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~ 269 (308)
..... ........................ .........+..+++|+|+++|++|..+|... .
T Consensus 199 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~ 265 (318)
T d1qlwa_ 199 LSHSQ--------SGIYPFQTAAMNPKGITAIVSVEP-----GECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKAC 265 (318)
T ss_dssp EEEGG--------GTTHHHHHHHHCCTTEEEEEEESC-----SCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHH
T ss_pred hhhhc--------ccchhhhhhhhhhhHHHHHHhhhc-----ccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHH
Confidence 10000 000000001111100000000000 00001223455678999999999999998533 3
Q ss_pred HHHHHHhc--CCCCcEEEec-----CCccccc-CCc-hhhHHHhhhcC
Q 035721 270 EELYKRAA--SKDKTLSIYP-----GMWHQLI-GEP-EENVELVFGEM 308 (308)
Q Consensus 270 ~~~~~~~~--~~~~~~~~~~-----~~gH~~~-~~~-~~~~~~i~~~i 308 (308)
+.+.+.+. +.+++++.+| |+||+++ |.+ +++++.|.++|
T Consensus 266 ~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL 313 (318)
T d1qlwa_ 266 HAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI 313 (318)
T ss_dssp HHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHH
Confidence 33444432 2567888865 6789998 765 88888888764
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=4.2e-19 Score=133.86 Aligned_cols=206 Identities=13% Similarity=0.023 Sum_probs=125.4
Q ss_pred CcceEEEEccC--CCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGF--TGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+|+|+|+||+ +++.. .|..+++.|... +.|+++|+||+|.+.... .+++++++++.+.|.... +..++
T Consensus 41 ~~~~l~c~~~~~~gg~~~-~y~~La~~L~~~-~~V~al~~pG~~~~e~~~---~s~~~~a~~~~~~i~~~~----~~~P~ 111 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPH-EFTRLAGALRGI-APVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQ----GDKPF 111 (255)
T ss_dssp CSSEEEEECCCSSSCSGG-GGHHHHHHHTTT-CCEEEECCTTSSTTCCEE---SSHHHHHHHHHHHHHHTT----SSSCE
T ss_pred CCCeEEEECCCCCCCCHH-HHHHHHHhcCCC-ceEEEEeCCCcCCCCCCC---CCHHHHHHHHHHHHHHhC----CCCCE
Confidence 37889999984 33443 568999999775 999999999999876543 378888887776664432 34489
Q ss_pred EEEEechhhHHHHHHHHhc---CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHH
Q 035721 135 FLYSESLGGAIALYITLRQ---KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW 211 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (308)
+|+||||||.+|+.+|.+. ..++.+++++++..... ................... .....+.
T Consensus 112 ~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~--------~~~~~~~~~~~~~~~~~~~------~~~~~~~- 176 (255)
T d1mo2a_ 112 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGH--------QDAMNAWLEELTATLFDRE------TVRMDDT- 176 (255)
T ss_dssp EEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSH--------HHHHHHHHHHHHTTCC----------CCCCHH-
T ss_pred EEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCC--------ccchhhHHHHHHHHhhccc------cccCCHH-
Confidence 9999999999999999865 45699999999854321 1111111111111100000 0000010
Q ss_pred HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcc
Q 035721 212 KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWH 291 (308)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 291 (308)
.+.......+....+ ....+.+|++++.+++|....... .+...+. ...+++.++ ++|
T Consensus 177 ----------------~l~a~~~~~~~~~~~--~~~~~~~p~l~v~a~~~~~~~~~~--~w~~~~~-~~~~~~~v~-G~H 234 (255)
T d1mo2a_ 177 ----------------RLTALGAYDRLTGQW--RPRETGLPTLLVSAGEPMGPWPDD--SWKPTWP-FEHDTVAVP-GDH 234 (255)
T ss_dssp ----------------HHHHHHHHHHHHHHC--CCCCCCCCEEEEECCSSSSCCTTC--CCCCCCC-SSCEEEECC-SCC
T ss_pred ----------------HHHHHHHHHHHHhcC--CCccccceEEEeecCCCCCcchhh--HHHHhCC-CCcEEEEEC-CCC
Confidence 111111111211121 235679999999998886543321 2222222 357889999 589
Q ss_pred cc-c-CCchhhHHHhhhcC
Q 035721 292 QL-I-GEPEENVELVFGEM 308 (308)
Q Consensus 292 ~~-~-~~~~~~~~~i~~~i 308 (308)
+. + ++++.+++.|.++|
T Consensus 235 ~~ml~~~~~~~A~~i~~~L 253 (255)
T d1mo2a_ 235 FTMVQEHADAIARHIDAWL 253 (255)
T ss_dssp SSCSSCCHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHh
Confidence 84 4 67888888776653
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.79 E-value=1.5e-18 Score=137.31 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=107.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH---HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI---VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
+...+...||++|.+.++.|... .+.|+||+.||++...... .....+.|+++||.|+++|.||+|.|.+....
T Consensus 6 ~~v~ipmrDGv~L~~~vy~P~~~-~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~-- 82 (347)
T d1ju3a2 6 SNVMVPMRDGVRLAVDLYRPDAD-GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP-- 82 (347)
T ss_dssp EEEEEECTTSCEEEEEEEEECCS-SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCT--
T ss_pred eCeEEECCCCCEEEEEEEEcCCC-CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCcccc--
Confidence 45688999999999999999765 5689999999987543211 12346778899999999999999999986543
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
......|..++++++........+|.++|+|+||.+++.+|...|..+++++...+....
T Consensus 83 -~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 83 -HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp -TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred -ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 223346778888888876544459999999999999999999999899999988887654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.78 E-value=1.2e-17 Score=132.24 Aligned_cols=138 Identities=20% Similarity=0.138 Sum_probs=102.5
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCc---cc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGE---SS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~---~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
++..+...+.+.||..|...++.|.+.+.+.|+||++||.+.. .. ..++.++..|+++|+.|+++|+|..+...+.
T Consensus 76 ~v~~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe 155 (358)
T d1jkma_ 76 DVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 155 (358)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred CccEEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccccc
Confidence 4556667788899999999999988765678999999997542 22 2345778889999999999999976443221
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCC
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGI 169 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~ 169 (308)
..+....+|+.++++++..... +..+++|+|+|.||.+++.++... ...+.++++..|....
T Consensus 156 ----~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 156 ----HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp ----CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred ----CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 2456678888888887754321 567999999999999998776542 2457888888886553
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.78 E-value=1.5e-19 Score=140.78 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCcceEEEEccCCCccch-----HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 56 KTLGVLCVVHGFTGESSW-----IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
+++.+|||+||++++... +|..+.+.|.++||+|+++|+||+|.|+.... ..+++++++..+++..+.+
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~---~~~~l~~~i~~~~~~~~~~--- 79 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG---RGEQLLAYVKQVLAATGAT--- 79 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS---HHHHHHHHHHHHHHHHCCS---
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---cHHHHHHHHHHHHHHhCCC---
Confidence 346678999999877542 36789999999999999999999998875432 3456666676666665444
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++++||||||.++..++.++|++++++|+++++.
T Consensus 80 --~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 80 --KVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp --CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --CEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 99999999999999999999999999999998853
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.77 E-value=5e-19 Score=135.39 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=82.1
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+++|||+||++++.. .+|..+.+.|.+.||+|+.+|++|+|.++ .+..++++...++.+.... +..++.|
T Consensus 31 ~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d--------~~~sae~la~~i~~v~~~~-g~~kV~l 101 (317)
T d1tcaa_ 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITALYAGS-GNNKLPV 101 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHT-TSCCEEE
T ss_pred CCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCc--------hHhHHHHHHHHHHHHHHhc-cCCceEE
Confidence 567899999987654 34567899999999999999999998764 3444667777777776653 4569999
Q ss_pred EEechhhHHHHHHHHhcC---CCccEEEEeCCcC
Q 035721 137 YSESLGGAIALYITLRQK---GAWDGLILNGAMC 167 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~ 167 (308)
+||||||.++..++..+| ++|+.+|.+++..
T Consensus 102 VGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 102 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred EEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 999999999999999887 5799999999864
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.77 E-value=2.9e-17 Score=130.97 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=108.3
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc----------hHHHHHHHHHHHcCCeEEEecCCCCcCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS----------WIVQLTAVLFAKSGFATCAIDHQGHGFS 100 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~----------~~~~~~~~~l~~~g~~v~~~d~~G~G~s 100 (308)
.++.++.+.||++|...++.|.+. .+.|+||+.|+++.... .......+.|+++||.|+.+|.||+|.|
T Consensus 24 ~~~v~i~~rDG~~L~~~v~~P~~~-~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S 102 (381)
T d1mpxa2 24 KREVMIPMRDGVKLHTVIVLPKGA-KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGS 102 (381)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred EEEEEEECCCCCEEEEEEEEeCCC-CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCC
Confidence 356789999999999999999775 57899999998764211 0112456789999999999999999999
Q ss_pred CCccccC--------CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 101 DGLVAHI--------PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 101 ~~~~~~~--------~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+..... ....+.++|..++++++..+.. +..+|.++|+|+||.+++.+|...|+.++++|..++...
T Consensus 103 ~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 103 EGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred CCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 8743221 1123457899999999977642 566899999999999999999999999999999888665
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.74 E-value=1.7e-17 Score=122.20 Aligned_cols=168 Identities=17% Similarity=0.164 Sum_probs=104.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCC--------cCCC-C-----ccccCCCcchH---HHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGH--------GFSD-G-----LVAHIPDLNPV---VED 116 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~--------G~s~-~-----~~~~~~~~~~~---~~d 116 (308)
+++++||++||+|++.. .+..+.+.|... ++.+++++-|.. .... . ......+.++. ...
T Consensus 12 ~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHH
Confidence 45789999999998877 446777877654 355666654311 0000 0 00000011111 122
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 117 AISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 117 ~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
+.++++... ..+ +..+++++|+|+||.+++.++.. .+..+.+++.+++.......
T Consensus 91 v~~li~~~~-~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~---------------------- 147 (218)
T d1auoa_ 91 VTDLIEAQK-RTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD---------------------- 147 (218)
T ss_dssp HHHHHHHHH-HTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT----------------------
T ss_pred HHHHHHHHH-HhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccc----------------------
Confidence 333333332 222 56799999999999999988754 56678999998874321100
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
..... . ...++|+++++|++|.++|.+.++++.+
T Consensus 148 ----------~~~~~----------------------------------~--~~~~~pvl~~hG~~D~vvp~~~~~~~~~ 181 (218)
T d1auoa_ 148 ----------ELELS----------------------------------A--SQQRIPALCLHGQYDDVVQNAMGRSAFE 181 (218)
T ss_dssp ----------TCCCC----------------------------------H--HHHTCCEEEEEETTCSSSCHHHHHHHHH
T ss_pred ----------ccccc----------------------------------h--hccCCCEEEEecCCCCccCHHHHHHHHH
Confidence 00000 0 0124699999999999999999999998
Q ss_pred HhcC--CCCcEEEecCCccccc
Q 035721 275 RAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 275 ~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.. .+++++.++ +||.+.
T Consensus 182 ~L~~~g~~~~~~~~~-~gH~i~ 202 (218)
T d1auoa_ 182 HLKSRGVTVTWQEYP-MGHEVL 202 (218)
T ss_dssp HHHTTTCCEEEEEES-CSSSCC
T ss_pred HHHHCCCCEEEEEEC-CCCccC
Confidence 8864 356888887 789776
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.72 E-value=2.8e-16 Score=126.19 Aligned_cols=238 Identities=15% Similarity=0.087 Sum_probs=141.0
Q ss_pred CCCc--EEEEEEecCCCCCCCcceEEEEccCCCccc--------------------------------------------
Q 035721 39 SRGL--RLFTQWWTPLPPAKTLGVLCVVHGFTGESS-------------------------------------------- 72 (308)
Q Consensus 39 ~~g~--~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-------------------------------------------- 72 (308)
.||. .|+..++.|.+. .+-|+|+..+.++....
T Consensus 36 rDG~~d~l~~di~rP~~~-~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (405)
T d1lnsa3 36 QRGENDLIKIQIIRPKST-EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVD 114 (405)
T ss_dssp CSSSCCEEEEEEEECCCS-SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEES
T ss_pred CCCCEeEEEEEEEccCCC-CCceEEEEeCCcCCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3898 599999999875 44577777777642110
Q ss_pred --------hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc---------------C
Q 035721 73 --------WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH---------------A 129 (308)
Q Consensus 73 --------~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~---------------~ 129 (308)
.+.....+.|+++||.|+.+|.||.|.|.+.... .+. +..+|..++|+++.... +
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~-~~~-~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~W 192 (405)
T d1lnsa3 115 KAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTS-GDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASW 192 (405)
T ss_dssp SCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCT-TSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTT
T ss_pred cccccccccccccchHHHHhCCCEEEEECCCCCCCCCCcccc-CCh-hhhhhHHHHHHHHHhcccccccccccccccccc
Confidence 0001345789999999999999999999986543 233 34789999999987531 1
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCC-------CchhhhhHHHhhhhCCCcccccCCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKP-------PWPLEHLLFTVAWLVPTWRVVPTRGSL 202 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (308)
...+|.++|+|+||..++.+|...|..++++|..++.......... .....................
T Consensus 193 snGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~------ 266 (405)
T d1lnsa3 193 ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLD------ 266 (405)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGS------
T ss_pred cCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccc------
Confidence 3448999999999999999999999899999988876553211000 000000000000000000000
Q ss_pred CCccccc-HH----HHHH-HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHh
Q 035721 203 PMVSFKE-EW----KRKL-ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRA 276 (308)
Q Consensus 203 ~~~~~~~-~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 276 (308)
....... .. .... ........... ..... .+....+.+|++|+|+++|..|..+++..+.++++.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------~~w~~-~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al 338 (405)
T d1lnsa3 267 GADFLKGNAEYEKRLAEMTAALDRKSGDYN-------QFWHD-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKAL 338 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTTCCCC-------HHHHT-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHS
T ss_pred cchhhhchhhhhhccchhhhhhhhccccch-------hhhhh-cChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHH
Confidence 0000000 00 0000 00000000000 00000 2334567789999999999999999999888998887
Q ss_pred cCC-CCcEEEecCCccccc
Q 035721 277 ASK-DKTLSIYPGMWHQLI 294 (308)
Q Consensus 277 ~~~-~~~~~~~~~~gH~~~ 294 (308)
... ..++++-+ .+|...
T Consensus 339 ~~~~~~~Lilgp-w~H~~~ 356 (405)
T d1lnsa3 339 PEGHAKHAFLHR-GAHIYM 356 (405)
T ss_dssp CTTCCEEEEEES-CSSCCC
T ss_pred HhCCCcEEEEeC-CCCCCC
Confidence 532 34665555 789765
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.72 E-value=2.6e-16 Score=120.49 Aligned_cols=225 Identities=9% Similarity=-0.071 Sum_probs=132.1
Q ss_pred cccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
..+...+++.||.+|.+.++.|++. ..+.|+||++||.++... .+.......+...++.+...+.++.........
T Consensus 6 ~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T d1qfma2 6 QTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWH 85 (280)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHH
T ss_pred EEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhh
Confidence 4466788999999999999998763 346799999999654322 122233444555577777777665543222111
Q ss_pred cC---CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 106 HI---PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 106 ~~---~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
.. .......++............. .....++.|.|.||..+...+...++.+++++...+................
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (280)
T d1qfma2 86 KGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW 165 (280)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG
T ss_pred hcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccccccccc
Confidence 11 1122223344444443333322 5668899999999999999999999888888887776543211100000000
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhh------hcCCCCcceEE
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQG------RFEEVEVPMLI 255 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~P~l~ 255 (308)
... . . .... .. ....... ..... .......|+|+
T Consensus 166 ~~~---~------------~-~~~~---~~--------------------~~~~~~~-~~~~~~~s~~~~~~~~~pP~Li 205 (280)
T d1qfma2 166 TTD---Y------------G-CSDS---KQ--------------------HFEWLIK-YSPLHNVKLPEADDIQYPSMLL 205 (280)
T ss_dssp HHH---H------------C-CTTS---HH--------------------HHHHHHH-HCGGGCCCCCSSTTCCCCEEEE
T ss_pred eec---c------------c-CCCc---cc--------------------ccccccc-cccccccchhhhcccCCCceEE
Confidence 000 0 0 0000 00 0000000 00011 11122348999
Q ss_pred EeeCCCcccChHHHHHHHHHhc---------CCCCcEEEecCCccccc
Q 035721 256 CHGGDDVVCDPACVEELYKRAA---------SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~ 294 (308)
++|++|..||+.++.++++++. +..+++++++++||.+.
T Consensus 206 ihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~ 253 (280)
T d1qfma2 206 LTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAG 253 (280)
T ss_dssp EEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTT
T ss_pred eecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCC
Confidence 9999999999999999998883 23578999999999875
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.72 E-value=1.4e-15 Score=118.58 Aligned_cols=117 Identities=20% Similarity=0.119 Sum_probs=82.8
Q ss_pred cccccceeEEcCCCc-EEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCC
Q 035721 28 SVSHSSEYITNSRGL-RLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~ 102 (308)
++..++..+...+|. .|..+++.|.+...+.|+||++||.+. +.... ..+...++. .||.|+.+|+|...+.
T Consensus 47 ~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~-~~~~~~la~~~G~~V~~vdYrl~pe~-- 123 (317)
T d1lzla_ 47 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESS-DPFCVEVARELGFAVANVEYRLAPET-- 123 (317)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGG-HHHHHHHHHHHCCEEEEECCCCTTTS--
T ss_pred CceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCccccccccccc-chHHHhHHhhcCCccccccccccccc--
Confidence 445566677777775 688889998765456789999999653 33323 455556654 5999999999975442
Q ss_pred ccccCCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc
Q 035721 103 LVAHIPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 103 ~~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+....+|+.+.++++... .+ +.++|+++|+|.||.+++.++.+.
T Consensus 124 ------~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 124 ------TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred ------cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 3455566666666666432 22 456899999999999999887653
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=3.2e-17 Score=124.81 Aligned_cols=100 Identities=13% Similarity=0.059 Sum_probs=79.5
Q ss_pred CcceEEEEccCCCccch----HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCC
Q 035721 57 TLGVLCVVHGFTGESSW----IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDL 132 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~----~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~ 132 (308)
++.+|||+||++++... +|..+.+.|.++||+|+++|++|+|.+. ...+++.+++.++++..+. +
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~------~~a~~l~~~i~~~~~~~g~-----~ 74 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSGQ-----P 74 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHCC-----S
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH------HHHHHHHHHHHHHHHHcCC-----C
Confidence 35569999999876542 4778999999999999999999988542 1334455555555555544 4
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++++||||||.++..++..+|++|+++|.++++.
T Consensus 75 ~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 75 KVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred eEEEEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 99999999999999999999999999999998753
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.68 E-value=4.6e-16 Score=124.26 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=107.2
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc-----------chHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES-----------SWIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~-----------~~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
..+...+.+.||++|.+.+|.|.++ .+.|+||+.|+++... ........+.|+++||.|+.+|.||.|
T Consensus 27 ~~~~v~ipmrDG~~L~~~v~~P~~~-~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g 105 (385)
T d2b9va2 27 IKREVMVPMRDGVKLYTVIVIPKNA-RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKY 105 (385)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred eEeEEEEECCCCCEEEEEEEEcCCC-CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCccc
Confidence 3456789999999999999999865 6788999988875321 011124567899999999999999999
Q ss_pred CCCCccccCC--------CcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 99 FSDGLVAHIP--------DLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 99 ~s~~~~~~~~--------~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.|.+...... .-...++|..++++++..+.. +..+|.++|+|+||.+++.+|...++.+++++..++....
T Consensus 106 ~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 106 GSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 185 (385)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEecccccc
Confidence 9987543210 112347899999999987642 5568999999999999999999999899999987776543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.67 E-value=3.3e-15 Score=115.86 Aligned_cols=125 Identities=15% Similarity=0.090 Sum_probs=86.8
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+...+...+| .+..++|.|+.. .|+||++||.+. +...+ ..++..+.. .|+.|+.+|+|....
T Consensus 57 ~~~~i~~~~g-~i~~~iy~P~~~---~P~il~iHGGg~~~g~~~~~-~~~~~~l~~~~g~~Vv~v~Yrlap~-------- 123 (311)
T d1jjia_ 57 EDRTIKGRNG-DIRVRVYQQKPD---SPVLVYYHGGGFVICSIESH-DALCRRIARLSNSTVVSVDYRLAPE-------- 123 (311)
T ss_dssp EEEEEEETTE-EEEEEEEESSSS---EEEEEEECCSTTTSCCTGGG-HHHHHHHHHHHTSEEEEEECCCTTT--------
T ss_pred EEEEEeCCCC-cEEEEEEcCCCC---ceEEEEEcCCCCccCChhhh-hhhhhhhhhcCCcEEEEeccccccc--------
Confidence 4456666666 789999988643 799999999753 33323 455666644 599999999995432
Q ss_pred CCcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCcCCC
Q 035721 108 PDLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAMCGI 169 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~ 169 (308)
..+....+|....++++.... . +.+++++.|+|.||.+++.++... .....+.+++.|....
T Consensus 124 ~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~ 193 (311)
T d1jjia_ 124 HKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp SCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred cccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeee
Confidence 245556677777777665531 1 456899999999999888776542 2356788888887654
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.61 E-value=4.8e-14 Score=109.28 Aligned_cols=127 Identities=17% Similarity=0.089 Sum_probs=88.8
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCC
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
...+. .+|.+|...+|.|++...+.|+||++||.+. +.. ....+...++.+ |+.|+.+|+|.... .
T Consensus 48 ~~~~~-~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~a~~~~~~v~~v~Yrl~p~--------~ 117 (308)
T d1u4na_ 48 EFDMD-LPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPE--------H 117 (308)
T ss_dssp EEEEE-ETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTT--------S
T ss_pred EEEEe-cCCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc-cccchhhhhhhcccccccccccccccc--------c
Confidence 33443 4788899999999765567899999999753 233 234666666666 46688899985432 2
Q ss_pred CcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcC----CCccEEEEeCCcCCC
Q 035721 109 DLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQK----GAWDGLILNGAMCGI 169 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~~ 169 (308)
.+....+|+...++++.... + +..++++.|+|.||.+++.++.... ..+.+..++.+....
T Consensus 118 ~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
T d1u4na_ 118 KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 186 (308)
T ss_dssp CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence 45566788888888887532 2 5668999999999999988776543 245667777765543
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.59 E-value=8.3e-15 Score=110.44 Aligned_cols=197 Identities=14% Similarity=0.053 Sum_probs=114.1
Q ss_pred cceeE-EcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccchH------HHHHHHHHHHcC-CeEEEecCCCCcCCC
Q 035721 32 SSEYI-TNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESSWI------VQLTAVLFAKSG-FATCAIDHQGHGFSD 101 (308)
Q Consensus 32 ~~~~~-~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~~~------~~~~~~~l~~~g-~~v~~~d~~G~G~s~ 101 (308)
+...+ ...+|.++.+.++.|.+ ..++-|+|+++||.+++...+ .......+...+ ...+.+...+.+...
T Consensus 23 ~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (255)
T d1jjfa_ 23 VNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAG 102 (255)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCC
T ss_pred EEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccccccc
Confidence 33334 34578999999999975 234568999999988664311 122333333332 222222222222221
Q ss_pred CccccCCCcchHHHHHHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 102 GLVAHIPDLNPVVEDAISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 102 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
..... .........+.+++..+..... +.+++.++|+|+||..++.++.++|+++++++.+++........
T Consensus 103 ~~~~~-~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~----- 176 (255)
T d1jjfa_ 103 PGIAD-GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE----- 176 (255)
T ss_dssp TTCSC-HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH-----
T ss_pred ccccc-cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccc-----
Confidence 11110 0111112233334444443321 55689999999999999999999999999999988754321000
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
... .+..........|+++.+|
T Consensus 177 --------------------------~~~--------------------------------~~~~~~~~~~~~~~~i~~G 198 (255)
T d1jjfa_ 177 --------------------------RLF--------------------------------PDGGKAAREKLKLLFIACG 198 (255)
T ss_dssp --------------------------HHC--------------------------------TTTTHHHHHHCSEEEEEEE
T ss_pred --------------------------ccc--------------------------------ccHHHHhhccCCcceEEeC
Confidence 000 0000111123468999999
Q ss_pred CCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 259 GDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
++|..++. .+++++.+.. -++++.+++++||...
T Consensus 199 ~~D~~~~~--~~~~~~~L~~~g~~~~~~~~~~ggH~~~ 234 (255)
T d1jjfa_ 199 TNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN 234 (255)
T ss_dssp TTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH
T ss_pred CCCCCchH--HHHHHHHHHHCCCCEEEEEECCCCcCHH
Confidence 99998753 5566666642 3578899999999754
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.57 E-value=1.4e-13 Score=105.44 Aligned_cols=138 Identities=9% Similarity=-0.017 Sum_probs=91.6
Q ss_pred cccccceeEE-cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHH---HHHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 28 SVSHSSEYIT-NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQ---LTAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 28 ~~~~~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
+++.+...+. ...|.++.+.+..|. .+.|+|+++||.++... ..|. .+.+.+.+.|+.++.++..+.+....
T Consensus 6 ~~~v~~~~~~s~~~~r~~~~~v~~p~---~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 82 (288)
T d1sfra_ 6 GLPVEYLQVPSPSMGRDIKVQFQSGG---ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSD 82 (288)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEECCS---TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCB
T ss_pred CCEEEEEEEECCCCCcEEEEEEeCCC---CCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCcc
Confidence 4444444443 346778888776554 35899999999876432 1222 24667777899999999876554332
Q ss_pred cccc------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 103 LVAH------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 103 ~~~~------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.... ..........+.+++..+..++. +..++.+.|+|+||..|+.++.++|+++.+++.+++...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 83 WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred ccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccc
Confidence 1110 00112222234455555555544 677899999999999999999999999999999998654
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.55 E-value=1.3e-13 Score=103.15 Aligned_cols=202 Identities=11% Similarity=0.009 Sum_probs=114.9
Q ss_pred cceeEEc-CCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCC----eEEEecCCCCcCCCCccc
Q 035721 32 SSEYITN-SRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF----ATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 32 ~~~~~~~-~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~~~~ 105 (308)
++..+.+ ..|.+..+.++.|.+. ..+.|+||++||.+...........+.+...|. .++.++....+. ....
T Consensus 16 ~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~--~~~~ 93 (246)
T d3c8da2 16 KEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTH--RAHE 93 (246)
T ss_dssp EEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHH--HHHH
T ss_pred EEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccc--cccc
Confidence 4444444 3477888888888752 345699999999543221111234555655543 233333221110 0000
Q ss_pred cCCC---cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhh
Q 035721 106 HIPD---LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182 (308)
Q Consensus 106 ~~~~---~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 182 (308)
.... .+.+.+++..+++.......+..++.++|+|+||..|+.++.++|+++++++.+++..........
T Consensus 94 ~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~------- 166 (246)
T d3c8da2 94 LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQ------- 166 (246)
T ss_dssp SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSS-------
T ss_pred cCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCcc-------
Confidence 0001 111223444444332111004568999999999999999999999999999999986442211000
Q ss_pred HHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCc
Q 035721 183 LFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDV 262 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 262 (308)
. ...... ............|+++.+|+.|.
T Consensus 167 ---------------------~----~~~~~~-------------------------~~~~~~~~~~~~~~~l~~G~~D~ 196 (246)
T d3c8da2 167 ---------------------Q----EGVLLE-------------------------KLKAGEVSAEGLRIVLEAGIREP 196 (246)
T ss_dssp ---------------------S----CCHHHH-------------------------HHHTTSSCCCSCEEEEEEESSCH
T ss_pred ---------------------c----hHHHHH-------------------------HhhhhhhhccCCCeEEEecCCCc
Confidence 0 000000 11123345567899999999998
Q ss_pred ccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 263 VCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+ ....+++++.+.. -.+++++++| ||...
T Consensus 197 ~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 197 MI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL 228 (246)
T ss_dssp HH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred ch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCChH
Confidence 76 4677888888753 3468888886 89765
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.48 E-value=1.2e-12 Score=98.99 Aligned_cols=123 Identities=9% Similarity=-0.036 Sum_probs=80.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHH---HHHHHHHHcCCeEEEecCCCCc-CCCCccccCCCcch-
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQ---LTAVLFAKSGFATCAIDHQGHG-FSDGLVAHIPDLNP- 112 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~---~~~~~l~~~g~~v~~~d~~G~G-~s~~~~~~~~~~~~- 112 (308)
..|+++.+.+..+. .|+|+++||.++... ..|. .+.+.+.+.++.|+.+|--..+ .++........+++
T Consensus 13 ~~~r~~~~~v~~~~-----~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tf 87 (267)
T d1r88a_ 13 SMGRDIPVAFLAGG-----PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTF 87 (267)
T ss_dssp TTTEEEEEEEECCS-----SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHH
T ss_pred cCCceeeEEEECCC-----CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHH
Confidence 35777887775432 489999999765322 1222 3566677789999999842111 11111111112222
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 113 VVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
+.+++ +..+...+. +..++.+.|+||||..|+.++.++|+++++++.+++....
T Consensus 88 l~~eL---~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 88 LSAEL---PDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 142 (267)
T ss_dssp HHTHH---HHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred HHHHH---HHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCC
Confidence 23344 444544444 6778999999999999999999999999999999986543
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.35 E-value=6.7e-11 Score=89.82 Aligned_cols=122 Identities=10% Similarity=0.030 Sum_probs=78.8
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHH---HHHHHHHHcCCeEEEecCCCCcCCCC---c-----ccc
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQ---LTAVLFAKSGFATCAIDHQGHGFSDG---L-----VAH 106 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~---~-----~~~ 106 (308)
.-|.+|...+-+ .+.|+|+|+||.++... ..|. .+.+.+.+.|+.|+.+|-...+.... + ...
T Consensus 15 ~~~r~i~~~~~~-----~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~ 89 (280)
T d1dqza_ 15 SMGRDIKVQFQG-----GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNY 89 (280)
T ss_dssp TTTEEEEEEEEC-----CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCS
T ss_pred cCCCcceEEeeC-----CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCc
Confidence 346777776532 23689999999865321 1222 35567777899999998432211110 0 000
Q ss_pred CCCcch-HHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 107 IPDLNP-VVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 107 ~~~~~~-~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
...+++ +++++...|+ ..+. +.+++.+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 90 ~~~~~~~~~~el~~~i~---~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 90 TYKWETFLTREMPAWLQ---ANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp CCBHHHHHHTHHHHHHH---HHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred chhHHHHHHHHHHHHHH---HhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccC
Confidence 011222 2445555544 4333 667899999999999999999999999999999998654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.35 E-value=5.2e-13 Score=99.34 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=73.0
Q ss_pred eEEEEccCCCccc--hHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 60 VLCVVHGFTGESS--WIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 60 ~vv~~hG~~~~~~--~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
+||++||++++.. ..+..+.+.+.+. |+.|+++++.....++..........+.++.+.+.++.... ...++.
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~---~~~~v~ 83 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPK---LQQGYN 83 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG---GTTCEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccc---ccccee
Confidence 7999999987643 2356788888765 89999999865444332222222445555555555543221 334899
Q ss_pred EEEechhhHHHHHHHHhcCC-CccEEEEeCCcC
Q 035721 136 LYSESLGGAIALYITLRQKG-AWDGLILNGAMC 167 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 167 (308)
+|||||||.++-.++.+.++ +|..+|.++++-
T Consensus 84 lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 99999999999999999875 589999988754
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.34 E-value=1.7e-12 Score=98.86 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=78.1
Q ss_pred CCcceEEEEccCCCccc-hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCC
Q 035721 56 KTLGVLCVVHGFTGESS-WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDL 132 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~ 132 (308)
+.+|+++++||+.++.. .++..+.+.+.. .+++|+++|+.... +..-...........+.+..+|+.+....+ +.+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 56899999999987654 244555555544 46999999997532 211111111334455677778877666544 667
Q ss_pred CEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+++|||||+||.+|-.++.+ ..++.+++.++|+...-
T Consensus 147 ~vhlIGhSLGAhvAG~aG~~-~~~l~rItgLDPA~P~F 183 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGSR-TPGLGRITGLDPVEASF 183 (337)
T ss_dssp GEEEEEETHHHHHHHHHHHT-STTCCEEEEESCCCTTT
T ss_pred heEEEeecHHHhhhHHHHHh-hccccceeccCCCcccc
Confidence 99999999999999765554 45799999999976543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=9.2e-12 Score=94.01 Aligned_cols=201 Identities=12% Similarity=0.009 Sum_probs=112.9
Q ss_pred ccceeEEcCCC-cEEEEEEecCCCC--CCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc----
Q 035721 31 HSSEYITNSRG-LRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL---- 103 (308)
Q Consensus 31 ~~~~~~~~~~g-~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---- 103 (308)
.+...+...+| .++.+.++.|.+. .++-|+|+++||...................++.|+++++++...-...
T Consensus 13 ~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~ 92 (265)
T d2gzsa1 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAY 92 (265)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHH
T ss_pred eEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCccccccc
Confidence 45667888887 4788888877763 2345899999995322111111122233445889999988775421110
Q ss_pred -----c---------ccCC----CcchHHH-HHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 104 -----V---------AHIP----DLNPVVE-DAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 104 -----~---------~~~~----~~~~~~~-d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
. .... ....+.+ ...+++..+..... +..++.+.|+|+||..++.++.+ ++.+.+++..
T Consensus 93 d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~ 171 (265)
T d2gzsa1 93 DYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSA 171 (265)
T ss_dssp HTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEE
T ss_pred ccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEEE
Confidence 0 0000 0011111 12223333333322 45578999999999999987665 5678888887
Q ss_pred CCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh
Q 035721 164 GAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQ 243 (308)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (308)
+|...... .... .. ....
T Consensus 172 s~~~~~~~--------------------------------------~~~~-----------------------~~-~~~~ 189 (265)
T d2gzsa1 172 SPSLGRGY--------------------------------------DALL-----------------------SR-VTAV 189 (265)
T ss_dssp SGGGSTTH--------------------------------------HHHH-----------------------HH-HHTS
T ss_pred CCcccccc--------------------------------------hhhh-----------------------hc-cccc
Confidence 77432110 0000 00 0111
Q ss_pred hhcCCCCcceEEEeeCC--------CcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 244 GRFEEVEVPMLICHGGD--------DVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~--------D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
........|+++.+|+. |..++....+++.+.+. +.++++.++||++|...
T Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~ 250 (265)
T d2gzsa1 190 EPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM 250 (265)
T ss_dssp CTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH
T ss_pred cccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH
Confidence 12233456778887766 55566778888888775 34679999999999643
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.30 E-value=3.8e-12 Score=96.75 Aligned_cols=114 Identities=11% Similarity=0.008 Sum_probs=82.0
Q ss_pred CCCcceEEEEccCCCccc-hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CC
Q 035721 55 AKTLGVLCVVHGFTGESS-WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PD 131 (308)
Q Consensus 55 ~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~ 131 (308)
+..+|+++++||+.++.. .++..+.+.+.. ..++|+++|+......... ..........+.+..+|+.+....+ +.
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~-~a~~n~~~Vg~~ia~~i~~l~~~~g~~~ 145 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT-QASYNTRVVGAEIAFLVQVLSTEMGYSP 145 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchH-HHHHhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 356899999999987654 244555555544 4699999999754322111 1111344556677778877665443 67
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
+++++||||+||.+|-.++.+.+.++.+++.++|+...
T Consensus 146 ~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 146 ENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp GGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred ceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 79999999999999999999888899999999997654
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.29 E-value=3.5e-10 Score=85.50 Aligned_cols=131 Identities=12% Similarity=0.055 Sum_probs=81.1
Q ss_pred cccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccchHH------HHHHHHHHH----cCCeEEEecCCCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIV------QLTAVLFAK----SGFATCAIDHQGH 97 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~------~~~~~~l~~----~g~~v~~~d~~G~ 97 (308)
..+...++..+| +..+.+|.|++- .++-|+|+++||.+++...++ ..+.+.+.. ..+.|+.++..+.
T Consensus 26 ~v~~~~~~~~~~-~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 104 (273)
T d1wb4a1 26 RIVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 104 (273)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCST
T ss_pred eEEEEEEecCCC-eEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCC
Confidence 345566777777 458888988762 345699999999887643221 223333322 2477778877654
Q ss_pred cCCCCccccCCCcchHHHHHHHHHHHH-----------HHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 98 GFSDGLVAHIPDLNPVVEDAISFFDSF-----------RARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 98 G~s~~~~~~~~~~~~~~~d~~~~l~~~-----------~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
+..... ......+++...++.. .... +..++.+.|+|+||..++.+|.++|+++.+++.+++.
T Consensus 105 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 105 NCTAQN-----FYQEFRQNVIPFVESKYSTYAESTTPQGIAA-SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp TCCTTT-----HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHT-TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred CCcccc-----chhcccccccchhhhhhhhhhhhhhhhcccC-CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 322211 0111122222221111 0000 5568999999999999999999999999999999885
Q ss_pred C
Q 035721 167 C 167 (308)
Q Consensus 167 ~ 167 (308)
.
T Consensus 179 ~ 179 (273)
T d1wb4a1 179 Y 179 (273)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=4.2e-10 Score=85.48 Aligned_cols=131 Identities=16% Similarity=0.093 Sum_probs=80.4
Q ss_pred cCCCcEEEEEEecCCCC-------CCCcceEEEEccCCCccchHHH--HHHHHHHHcCCeEEEecCCCC-----------
Q 035721 38 NSRGLRLFTQWWTPLPP-------AKTLGVLCVVHGFTGESSWIVQ--LTAVLFAKSGFATCAIDHQGH----------- 97 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-------~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~----------- 97 (308)
..-|.+..+.++.|+.- +++-|+|+++||.+++...|.+ .+.+...+.+..|+.++....
T Consensus 22 ~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~ 101 (299)
T d1pv1a_ 22 NSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp SSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCC
T ss_pred cccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCccccc
Confidence 34577888999988642 1346899999999887653322 234445556888888874321
Q ss_pred -----cCCCCcc------ccCCCcch-HHHHHHHHHHHHHHhcC-----CCCCEEEEEechhhHHHHHHHHh--cCCCcc
Q 035721 98 -----GFSDGLV------AHIPDLNP-VVEDAISFFDSFRARHA-----PDLPAFLYSESLGGAIALYITLR--QKGAWD 158 (308)
Q Consensus 98 -----G~s~~~~------~~~~~~~~-~~~d~~~~l~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~ 158 (308)
+.+.... .....+++ +.+++...++..-.... +.++..|.|+||||.-|+.+|.+ +|+++.
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~ 181 (299)
T d1pv1a_ 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYK 181 (299)
T ss_dssp SSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCS
T ss_pred ccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceE
Confidence 1111000 00001122 34555555544321100 12478999999999999999976 589999
Q ss_pred EEEEeCCcCC
Q 035721 159 GLILNGAMCG 168 (308)
Q Consensus 159 ~~vl~~~~~~ 168 (308)
++...++...
T Consensus 182 ~~~s~s~~~~ 191 (299)
T d1pv1a_ 182 SCSAFAPIVN 191 (299)
T ss_dssp EEEEESCCCC
T ss_pred EEeeccCcCC
Confidence 9998888654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=4.9e-09 Score=85.03 Aligned_cols=137 Identities=17% Similarity=0.145 Sum_probs=94.3
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHH------------------HHHcCCeEEE
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVL------------------FAKSGFATCA 91 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~------------------l~~~g~~v~~ 91 (308)
.....++...++..|+|..+...+....+|+++++.|.+|.++ .+..+.+. +.+ -.+++-
T Consensus 20 ~~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~SW~~-~anllf 97 (452)
T d1ivya_ 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLY 97 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEE
T ss_pred cceeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCcchhc-ccCEEE
Confidence 3445677777888999988876654456899999999999887 43333221 111 147899
Q ss_pred ecCC-CCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEe
Q 035721 92 IDHQ-GHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----QKGAWDGLILN 163 (308)
Q Consensus 92 ~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~ 163 (308)
+|.| |.|.|..... ...+..+.+.|+.++++..-.... ...++.|.|-|+||..+-.+|.. .+-.++++++.
T Consensus 98 IDqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~ig 177 (452)
T d1ivya_ 98 LESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVG 177 (452)
T ss_dssp ECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEE
T ss_pred EecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcC
Confidence 9975 9999865332 223445667777776655544332 56699999999999987777653 22358999999
Q ss_pred CCcCC
Q 035721 164 GAMCG 168 (308)
Q Consensus 164 ~~~~~ 168 (308)
++...
T Consensus 178 ng~~d 182 (452)
T d1ivya_ 178 NGLSS 182 (452)
T ss_dssp SCCSB
T ss_pred CCccC
Confidence 98754
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.03 E-value=8.7e-10 Score=83.95 Aligned_cols=46 Identities=13% Similarity=0.244 Sum_probs=39.3
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcC----CCCcEEEecCCccccc
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAAS----KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~ 294 (308)
...|+++++|.+|..|++..++++.+.+.. .+++++..+++||.+.
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fp 138 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFP 138 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCC
Confidence 357999999999999999999999998853 2466788899999987
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.00 E-value=2e-07 Score=74.56 Aligned_cols=135 Identities=14% Similarity=0.146 Sum_probs=92.6
Q ss_pred cceeEEcCC-CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHH-----------------HHHcCCeEEEec
Q 035721 32 SSEYITNSR-GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVL-----------------FAKSGFATCAID 93 (308)
Q Consensus 32 ~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-----------------l~~~g~~v~~~d 93 (308)
-..++...+ +..++|..+...+....+|+||++-|.+|.+. .+..+.+. ..+ -.+++-+|
T Consensus 17 ysGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS-~~g~~~e~GP~~i~~~~~~~~N~~sW~~-~anllfiD 94 (421)
T d1wpxa1 17 YTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFELGPSSIGPDLKPIGNPYSWNS-NATVIFLD 94 (421)
T ss_dssp EEEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSCEEECTTCGGG-SSEEEEEC
T ss_pred eeeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEECCCCccccCCccccc-ccCEEEEe
Confidence 345665543 56899987776555466899999999999887 44333321 111 25799999
Q ss_pred C-CCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEE
Q 035721 94 H-QGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLIL 162 (308)
Q Consensus 94 ~-~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl 162 (308)
. .|.|.|........+..+.++|+.++++..-.... ...++.|.|-|+||..+-.+|.+- +-.++++++
T Consensus 95 ~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~i 174 (421)
T d1wpxa1 95 QPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp CSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEE
T ss_pred cCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEe
Confidence 4 59999965444334666677888888876655432 235899999999999877766432 234789999
Q ss_pred eCCcCC
Q 035721 163 NGAMCG 168 (308)
Q Consensus 163 ~~~~~~ 168 (308)
.++...
T Consensus 175 Gng~~d 180 (421)
T d1wpxa1 175 GNGLTD 180 (421)
T ss_dssp ESCCCC
T ss_pred cCCccc
Confidence 888655
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.91 E-value=5.7e-10 Score=86.90 Aligned_cols=102 Identities=12% Similarity=0.002 Sum_probs=71.7
Q ss_pred CcceEEEEccCCCccc------hHHHH----HHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESS------WIVQL----TAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~------~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
++-+|||+||+.+-.. .||.. +.+.|.++|+.|++......+ +.++-+.++...|+....
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~----------S~~~RA~eL~~~I~~~~~ 75 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS----------SNWDRACEAYAQLVGGTV 75 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB----------CHHHHHHHHHHHHHCEEE
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc----------CHHHHHHHHHHHHhhhhh
Confidence 4567999999865421 35643 788899999999999875433 566667777777763221
Q ss_pred hc-----------------------C-CCCCEEEEEechhhHHHHHHHHhcC-------------------------CCc
Q 035721 127 RH-----------------------A-PDLPAFLYSESLGGAIALYITLRQK-------------------------GAW 157 (308)
Q Consensus 127 ~~-----------------------~-~~~~~~l~G~S~Gg~~a~~~a~~~p-------------------------~~v 157 (308)
.. + ...||+||||||||..+-.++...| +.|
T Consensus 76 d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V 155 (388)
T d1ku0a_ 76 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFV 155 (388)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcce
Confidence 10 0 2359999999999998877775433 369
Q ss_pred cEEEEeCCcCC
Q 035721 158 DGLILNGAMCG 168 (308)
Q Consensus 158 ~~~vl~~~~~~ 168 (308)
++|+.++++-.
T Consensus 156 ~SvTTIsTPH~ 166 (388)
T d1ku0a_ 156 LSVTTIATPHD 166 (388)
T ss_dssp EEEEEESCCTT
T ss_pred EEEEeccCCCC
Confidence 99999987643
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.55 E-value=2.1e-07 Score=75.97 Aligned_cols=126 Identities=17% Similarity=0.137 Sum_probs=82.6
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCcc---chHHHHHHHHHHHcCCeEEEecCCC--CcCCCCcc-ccCCCcchHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGES---SWIVQLTAVLFAKSGFATCAIDHQG--HGFSDGLV-AHIPDLNPVVED 116 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~-~~~~~~~~~~~d 116 (308)
-|+..+|.|.....+.|++|+|||.+... ..........+.+.+..|+++++|- +|.-.... .....-.--..|
T Consensus 81 CL~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~D 160 (483)
T d1qe3a_ 81 CLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLD 160 (483)
T ss_dssp CCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHH
T ss_pred CCEEEEEECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHH
Confidence 46667777876656689999999976332 1121122334445579999999993 23211110 011123344678
Q ss_pred HHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 117 AISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 117 ~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
...+|++++..- + ++++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 161 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 161 QAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 888888887653 3 788999999999999887766532 257999999987643
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.49 E-value=9.7e-06 Score=65.66 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=78.9
Q ss_pred CcEEEEEEecCCCCC--CCcceEEEEccCCCccchHHHHHHHH-----------------HHHcCCeEEEecCC-CCcCC
Q 035721 41 GLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQLTAVL-----------------FAKSGFATCAIDHQ-GHGFS 100 (308)
Q Consensus 41 g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~-----------------l~~~g~~v~~~d~~-G~G~s 100 (308)
+..++|..+...+.. ..+|++|++-|.+|.++ .+..+.+. ..+ -..++-+|.| |.|.|
T Consensus 48 ~~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS-~~g~f~E~GP~~v~~~~~l~~Np~SWn~-~an~lfIDqPvGvGfS 125 (483)
T d1ac5a_ 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFS 125 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTC
T ss_pred cceEEEEEEEecCCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCeEECCCCceeeCCCcccc-cCCEEEEeCCCCcCee
Confidence 446777666544331 23599999999999887 43322210 111 2578999965 89988
Q ss_pred CCccc---------cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc------------CCCc
Q 035721 101 DGLVA---------HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ------------KGAW 157 (308)
Q Consensus 101 ~~~~~---------~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v 157 (308)
-.... ...+.++.++++..+++..-.... ...++.|.|-|+||..+-.+|... +-.+
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inL 205 (483)
T d1ac5a_ 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred ecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccc
Confidence 54321 112345567777777765544332 456899999999999777666532 1247
Q ss_pred cEEEEeCCcCC
Q 035721 158 DGLILNGAMCG 168 (308)
Q Consensus 158 ~~~vl~~~~~~ 168 (308)
+++.+.++...
T Consensus 206 kGi~IGNg~~d 216 (483)
T d1ac5a_ 206 KALLIGNGWID 216 (483)
T ss_dssp EEEEEEEECCC
T ss_pred eeeeecCCccC
Confidence 88888777544
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.49 E-value=5e-07 Score=74.61 Aligned_cols=124 Identities=17% Similarity=0.101 Sum_probs=80.6
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCcc---chHHHHHHHHHHHcCCeEEEecCCC----CcCCCCccccCCCcchHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGES---SWIVQLTAVLFAKSGFATCAIDHQG----HGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~ 115 (308)
-|+..+|.|.....+.|++|+|||.+... ..........+.+.+..||.+++|= +-....... .+-..-..
T Consensus 91 CL~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~--~~gN~Gl~ 168 (532)
T d1ea5a_ 91 CLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQE--APGNVGLL 168 (532)
T ss_dssp CCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSS--SCSCHHHH
T ss_pred CCEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccC--CCCcccch
Confidence 45666677876556789999999975321 1111122233445689999999983 322211111 12333467
Q ss_pred HHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 116 DAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 116 d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
|...+|++++.. .+ ++++|.|+|+|.||..+..++.. ....+.++|+.++...
T Consensus 169 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 169 DQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 888888888764 23 78899999999999987766553 2357999999887654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=1.1e-06 Score=72.48 Aligned_cols=126 Identities=17% Similarity=0.097 Sum_probs=79.4
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCC--CcCCCCccccCCCcchHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQG--HGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~d~ 117 (308)
-|+..+|.|....++.|++|+|||.+.... ..........++.+..|+.+++|= +|.-........+-..-..|.
T Consensus 89 CL~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq 168 (526)
T d1p0ia_ 89 CLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQ 168 (526)
T ss_dssp CCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHH
T ss_pred CCEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccch
Confidence 366666778765566799999999764321 111111222335579999999983 221111101111334456788
Q ss_pred HHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHH--hcCCCccEEEEeCCcCC
Q 035721 118 ISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITL--RQKGAWDGLILNGAMCG 168 (308)
Q Consensus 118 ~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~~ 168 (308)
..+|++++..- + ++.+|.|+|+|.||..+..++. .....+.++|+.++...
T Consensus 169 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 169 QLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred hhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 88888887642 3 7889999999999998765543 23356889998887544
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.41 E-value=1.1e-06 Score=72.77 Aligned_cols=123 Identities=19% Similarity=0.146 Sum_probs=78.9
Q ss_pred EEEEEEecCCCC-CCCcceEEEEccCCCc---cc-hHHHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchH
Q 035721 43 RLFTQWWTPLPP-AKTLGVLCVVHGFTGE---SS-WIVQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 43 ~l~~~~~~~~~~-~~~~~~vv~~hG~~~~---~~-~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 113 (308)
-|+..+|.|... ..+.|++|+|||.+.. .. ..+.. ....++.+..|+.+++| |+-.+..... .+-..-
T Consensus 96 CL~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~-~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~--~~gN~G 172 (542)
T d2ha2a1 96 CLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDG-RFLAQVEGAVLVSMNYRVGTFGFLALPGSRE--APGNVG 172 (542)
T ss_dssp CCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCT-HHHHHHHCCEEEEECCCCHHHHHCCCTTCSS--CCSCHH
T ss_pred CCEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCc-hhhhhhccceeEeeeeeccceeeeccccccc--CCCcCC
Confidence 355556666543 2456999999997532 22 12111 12233468999999999 4422221111 123334
Q ss_pred HHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
..|...+|++++.. .+ ++.+|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 173 l~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred cccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 67888888888764 23 788999999999999887666543 257999999887543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.30 E-value=3.3e-06 Score=69.61 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=76.1
Q ss_pred EEEEEEecCCCC--CCCcceEEEEccCCCccc--hHH--HHHH--HHHHHcCCeEEEecCCC--CcCCCCc-cccCCCcc
Q 035721 43 RLFTQWWTPLPP--AKTLGVLCVVHGFTGESS--WIV--QLTA--VLFAKSGFATCAIDHQG--HGFSDGL-VAHIPDLN 111 (308)
Q Consensus 43 ~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~--~~~--~~~~--~~l~~~g~~v~~~d~~G--~G~s~~~-~~~~~~~~ 111 (308)
-|+..+|.|... ..+.|++|+|||.+.... ..+ ..+. ..+..++..||++++|- +|.-... ......-.
T Consensus 97 CL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN 176 (534)
T d1llfa_ 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGN 176 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccc
Confidence 355666777532 356899999999764221 111 1222 23446689999999993 2221111 00001222
Q ss_pred hHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHH-HHHHhc----C---CCccEEEEeCCcC
Q 035721 112 PVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIAL-YITLRQ----K---GAWDGLILNGAMC 167 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~-~~a~~~----p---~~v~~~vl~~~~~ 167 (308)
--..|...+|++++..- + ++.+|.|+|+|.||..+. +++... | ..++++|+.++..
T Consensus 177 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred cchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 34568888888887742 3 788999999999999665 443221 1 3589999998754
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=3.6e-06 Score=69.35 Aligned_cols=123 Identities=18% Similarity=0.142 Sum_probs=79.2
Q ss_pred EEEEEecCCCC--CCCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCC--CcCCCCccccCCCcchHHHHH
Q 035721 44 LFTQWWTPLPP--AKTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQG--HGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 44 l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~d~ 117 (308)
|+..+|.|... ..+.|++|+|||.+.... ..+. -...++.++..||++++|- +|.-...... ..-..-..|.
T Consensus 97 L~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~-~~gN~Gl~Dq 174 (532)
T d2h7ca1 97 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYD-GLALAAHENVVVVTIQYRLGIWGFFSTGDEH-SRGNWGHLDQ 174 (532)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSC-CHHHHHHHTCEEEEECCCCHHHHHCCCSSTT-CCCCHHHHHH
T ss_pred CEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCC-chhhhhcCceEEEEEeeccCCCccccccccc-cccccccHHH
Confidence 55566777543 234699999999764322 1221 2234456789999999983 2321111111 1223346788
Q ss_pred HHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 118 ISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 118 ~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
..+|++++.. .+ ++++|.|+|+|.||..+..++.. ....++++|+.++...
T Consensus 175 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 175 VAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 8888888764 23 78899999999999987766543 3357899999887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.26 E-value=4.4e-06 Score=68.98 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=77.3
Q ss_pred EEEEEEecCCCC--CCCcceEEEEccCCCccch--H--HHH-HHHHH-HHcCCeEEEecCCC--CcCCCCcc-ccCCCcc
Q 035721 43 RLFTQWWTPLPP--AKTLGVLCVVHGFTGESSW--I--VQL-TAVLF-AKSGFATCAIDHQG--HGFSDGLV-AHIPDLN 111 (308)
Q Consensus 43 ~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~--~--~~~-~~~~l-~~~g~~v~~~d~~G--~G~s~~~~-~~~~~~~ 111 (308)
-|+..+|.|... ..+.|++|+|||.+..... . ... ....+ ...+..||++++|= +|.-.... .....-.
T Consensus 105 CL~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN 184 (544)
T d1thga_ 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTN 184 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CCEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhcccccc
Confidence 356666777542 2457999999997643321 1 012 22333 34579999999982 22211110 0001223
Q ss_pred hHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcC
Q 035721 112 PVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMC 167 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~ 167 (308)
--..|...+|++++..- + ++++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 185 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 34678888888887652 3 788999999999998766555421 24799999988754
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.17 E-value=3.7e-06 Score=68.97 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=75.6
Q ss_pred EEEEEecCCCC--CCCcceEEEEccCCCccc---hH-HHHHHHHHHHcCCeEEEecCCC--CcCCCCcc-ccCCCcchHH
Q 035721 44 LFTQWWTPLPP--AKTLGVLCVVHGFTGESS---WI-VQLTAVLFAKSGFATCAIDHQG--HGFSDGLV-AHIPDLNPVV 114 (308)
Q Consensus 44 l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~---~~-~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~-~~~~~~~~~~ 114 (308)
|+..+|.|... ..+.|++|++||.+.... .+ ..... ...+.+..|+.+++|= +|.-.... ........-.
T Consensus 81 L~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~-~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl 159 (517)
T d1ukca_ 81 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVI-QASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGL 159 (517)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHH-HHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHH
T ss_pred CEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhh-hhhccccceEEEEecccceeecCccccccccccchhH
Confidence 55666777543 234699999999763322 11 12221 1234567889999983 22211110 0101223446
Q ss_pred HHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEeCCcCC
Q 035721 115 EDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLR----QKGAWDGLILNGAMCG 168 (308)
Q Consensus 115 ~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 168 (308)
.|...+|++++..- + ++++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 78888888887642 3 78899999999999977644332 2247999999987543
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.94 E-value=3.2e-05 Score=64.17 Aligned_cols=111 Identities=14% Similarity=0.036 Sum_probs=69.6
Q ss_pred CCcceEEEEccCCCcc---c-hHHHHHHHHHH-HcCCeEEEecCCC--CcCCCC------ccccCCCcchHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGES---S-WIVQLTAVLFA-KSGFATCAIDHQG--HGFSDG------LVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~-~~g~~v~~~d~~G--~G~s~~------~~~~~~~~~~~~~d~~~~l~ 122 (308)
.+.|++|+|||.+... . ..+. ...|+ +.+..||++++|= +|.-.. ......+-.--..|...+|+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~--~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYN--ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGC--CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccc--hhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 4579999999975321 1 1111 22333 3358889999982 222111 00111123445678888999
Q ss_pred HHHHhc---C-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 123 SFRARH---A-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 123 ~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
+++..- + ++++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 888742 3 78899999999999988755543 2356889998876544
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.86 E-value=4.7e-05 Score=63.20 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=76.0
Q ss_pred EEEEEEecCCCC---CCCcceEEEEccCCCccchH----H--HHH--HHHHHH-cCCeEEEecCCC--CcCCCCccccCC
Q 035721 43 RLFTQWWTPLPP---AKTLGVLCVVHGFTGESSWI----V--QLT--AVLFAK-SGFATCAIDHQG--HGFSDGLVAHIP 108 (308)
Q Consensus 43 ~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~----~--~~~--~~~l~~-~g~~v~~~d~~G--~G~s~~~~~~~~ 108 (308)
-|+..+|.|... ..+.|++|+|||.+.....- + ..+ ...|+. .+..||.+++|= +|.-...... .
T Consensus 80 CL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~-~ 158 (579)
T d2bcea_ 80 CLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN-L 158 (579)
T ss_dssp CCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTT-C
T ss_pred CCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccC-C
Confidence 355666766432 23569999999976422100 0 001 123333 368999999992 2221111111 1
Q ss_pred CcchHHHHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 109 DLNPVVEDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
.-.--..|...+|++++..- + ++++|.|+|+|.||..+...+.. ....++++|+.++...
T Consensus 159 ~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 159 PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred CccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 22334678888888887652 3 78899999999999987765543 3467999999986543
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=97.77 E-value=0.00035 Score=48.49 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=63.7
Q ss_pred eEEEEccCCCccc--hHHHHHHHHHH----HcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 60 VLCVVHGFTGESS--WIVQLTAVLFA----KSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 60 ~vv~~hG~~~~~~--~~~~~~~~~l~----~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
.||+.-|.+.... ..-..+.+.|. ..+..+..++++-............+...-+.++...+.....+- +..+
T Consensus 19 ~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~C-P~tk 97 (197)
T d1cexa_ 19 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKC-PDAT 97 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhC-CCCe
Confidence 4566666554322 11123344333 334456666654322111111111244455677777777777664 6679
Q ss_pred EEEEEechhhHHHHHHHHhcC----CCccEEEEeCCc
Q 035721 134 AFLYSESLGGAIALYITLRQK----GAWDGLILNGAM 166 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~ 166 (308)
++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 98 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 98 LIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp EEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred EEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 999999999999988877543 689999998854
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=97.04 E-value=0.0012 Score=46.18 Aligned_cols=106 Identities=16% Similarity=0.048 Sum_probs=61.8
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHc--CCeEEEecCCCCcCCCCc--cccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKS--GFATCAIDHQGHGFSDGL--VAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~--~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.||+.-|.+.... .....+...+.+. |-.+..+++|..-..... ..+..+..+-+.++...++....+- +..++
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C-P~tki 84 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSC-PDTQL 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhC-CCCeE
Confidence 3555666544322 1112333333332 567888888875332111 1111133444566777777776664 56799
Q ss_pred EEEEechhhHHHHHHHHhc------------------CCCccEEEEeCCc
Q 035721 135 FLYSESLGGAIALYITLRQ------------------KGAWDGLILNGAM 166 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~------------------p~~v~~~vl~~~~ 166 (308)
+|+|+|.|+.++-.++... .++|.++++++-+
T Consensus 85 vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 85 VLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCC
Confidence 9999999999998776421 1357888888643
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.98 E-value=0.00051 Score=50.30 Aligned_cols=42 Identities=29% Similarity=0.402 Sum_probs=30.6
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+....+++...++.+.... +..++++.|||+||.+|..++..
T Consensus 112 ~~~~~~~i~~~v~~~~~~~-~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 112 YEQVVNDYFPVVQEQLTAH-PTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC-CCceEEEEecccchHHHHHHHHH
Confidence 3445556666666655543 56699999999999999887753
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.91 E-value=0.00068 Score=49.48 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=30.6
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
....+++...++.+..+. +..++++.|||+||.+|..++..
T Consensus 105 ~~i~~~i~~~i~~~~~~~-~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 105 ISVQDQVESLVKQQASQY-PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC-CCcceEEeccchhHHHHHHHHHH
Confidence 344566667777666654 55689999999999999987754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.90 E-value=0.00062 Score=49.98 Aligned_cols=43 Identities=23% Similarity=0.284 Sum_probs=31.6
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
+....+++...++.+..+. +..++++.|||+||.+|..++...
T Consensus 117 ~~~~~~~v~~~v~~~~~~~-~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREH-PDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCcceeeeccchHHHHHHHHHHHH
Confidence 3444556666666665554 566999999999999999888754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.90 E-value=0.00051 Score=50.50 Aligned_cols=43 Identities=23% Similarity=0.297 Sum_probs=31.5
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
+.....++...++.+..+. +..++++.|||+||.+|..++...
T Consensus 116 ~~~~~~~i~~~i~~~~~~~-~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQN-PNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCceEEEeccchHHHHHHHHHHHH
Confidence 3445566666676665554 566899999999999999887653
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.82 E-value=0.00079 Score=49.30 Aligned_cols=42 Identities=21% Similarity=0.243 Sum_probs=29.5
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+.....++...++.+..+. +..++++.|||+||.+|..++..
T Consensus 111 ~~~v~~~i~~~i~~~~~~~-~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 111 YGEVQNELVATVLDQFKQY-PSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCceEEEecccchHHHHHHHHHH
Confidence 3444455566665555543 56689999999999999987753
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=96.79 E-value=0.0031 Score=44.14 Aligned_cols=106 Identities=15% Similarity=0.059 Sum_probs=61.3
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHc--CCeEEEecCCCCcCCCCc--cccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKS--GFATCAIDHQGHGFSDGL--VAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~--~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.||++.|.+.... .....+...+.+. |-.+..+++|........ ..+..+..+-+.++...++....+- +..++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~C-P~tk~ 84 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQC-PSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHS-TTCEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcCCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhC-CCCcE
Confidence 4566666653221 0112333333222 567888899864322111 1111233444566777777776664 56699
Q ss_pred EEEEechhhHHHHHHHHhc------------------CCCccEEEEeCCc
Q 035721 135 FLYSESLGGAIALYITLRQ------------------KGAWDGLILNGAM 166 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~------------------p~~v~~~vl~~~~ 166 (308)
+|+|+|.|+.++-.++... .++|.++++++-+
T Consensus 85 vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP 134 (207)
T d1g66a_ 85 VLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCC
Confidence 9999999999998776421 1357788887754
|