Citrus Sinensis ID: 035726

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISSVLYNLFFFI
Secondary Structure (PSIPRED)
cccccccccEEEEcccccccccccccccccccccEEcccccccEEcccccEEEEEEEEEEEEccccccccccccEEEEEEcccccccccccEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccccccccccccccccccEEEEccccccEEcccccEEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
qaatpddeeWYFFSELQKKyansdrvdrttkvgswkvtggdrqiwdncgkevigvkknlvfhkghgskakktSWVIHEYHSSKASIHQAISSVLYNLFFFI
Flexible Loop (DISEMBL)
qaatpddeewyFFSELqkkyansdrvdrttkvgswkvtggdrqiwdncGKEVIGVKKnlvfhkghgskakktsWVIHEYHSSKASIHQAISSVLYNLFFFI
Low Complexity Region (SEG)
QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISSVLYNLFFFI
Disordered region (IsUnstruct)
*********WYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIH************************
Disordered Region (DISOPRED)
***TPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISSVLYNLFFFI
Disordered Region (DISEMBL)
********EWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHK********TSWVIHEYHSSKASIHQAISSVLYNLFFFI
Disordered Region (DISPRO)
*****DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISSVLYNLFFFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISSVLYNLFFFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.801	0.142	0.481	2e-18
A0SPJ6	396	NAC transcription factor	N/A	no	0.841	0.214	0.465	5e-17
A0SPJ9	402	NAC transcription factor	N/A	no	0.900	0.226	0.445	5e-17
A0SPJ8	406	NAC transcription factor	N/A	no	0.910	0.226	0.431	2e-16
D2SMN4	406	NAC transcription factor	N/A	no	0.910	0.226	0.421	5e-16
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.762	0.184	0.467	6e-16
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.871	0.263	0.386	2e-15
A0SPJ4	405	NAC transcription factor	N/A	no	0.841	0.209	0.444	3e-15
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.732	0.197	0.459	4e-15
A8MQY1	473	NAC domain-containing pro	no	no	0.742	0.158	0.486	7e-15

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           D EWYFFS L KKY+N  + +R T+ G WK TG DR+I +  G  V+G+KK LV+HKG  
Sbjct: 64  DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRA 121

Query: 67  SKAKKTSWVIHEYHSSKASIHQA 89
            + ++T+WV+HEY  S   + +A
Sbjct: 122 PRGERTNWVMHEYRLSDEDLKKA 144

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIW-DNCGKEVIGVKKNL 59
           + AT  ++EWYFFS   +KY N  R +R    G WK TG D+ I    CG+E +GVKK L
Sbjct: 75  EKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKAL 134

Query: 60  VFHKGHGSKAKKTSWVIHEYHSSKAS 85
           VF++G   K  KT+W++HEY  + AS
Sbjct: 135 VFYRGKPPKGLKTNWIMHEYRLTDAS 160

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIW-DNCGKEVIGVKKNL 59
           + AT  ++EWYFFS   +KY N  R +R    G WK TG D+ I    CG+E +GVK  L
Sbjct: 75  EKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXAL 134

Query: 60  VFHKGHGSKAKKTSWVIHEYHSSKASIHQAIS 91
           VF++G   K  KT+W++HEY  + AS   A S
Sbjct: 135 VFYRGKPPKGLKTNWIMHEYRLTDASSSAATS 166

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDN---CGKEVIGVKK 57
           + AT  + EWYFFS   +KYAN  R +R    G WK TG D+ I  +   CG+E +GVKK
Sbjct: 82  EKATFGEHEWYFFSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKK 141

Query: 58  NLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISS 92
            LVF++G   +  KT+W++HEY  + AS     +S
Sbjct: 142 ALVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTS 176

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDN---CGKEVIGVKK 57
           + AT  + EWYFFS   +KY N  R +R    G WK TG D+ I  +   CG+E +GVKK
Sbjct: 82  EKATFGEHEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKK 141

Query: 58  NLVFHKGHGSKAKKTSWVIHEYHSSKASIHQAISS 92
            LVF++G   +  KT+W++HEY  + AS     +S
Sbjct: 142 ALVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTS 176

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query: 3   ATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFH 62
           A   ++EWYF+    +KY NS R +R T  G WK TG DR I+ + G + IG+KK+LVF+
Sbjct: 65  AMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY 124

Query: 63  KGHGSKAKKTSWVIHEY 79
           KG  +K  KT W++HE+
Sbjct: 125 KGRAAKGVKTDWMMHEF 141

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/88 (38%), Positives = 51/88 (57%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLV 60
           + A   + EWYF+S   +KY    R +R T  G WK TG D++++   G +++G+KK LV
Sbjct: 69  EMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLV 128

Query: 61  FHKGHGSKAKKTSWVIHEYHSSKASIHQ 88
           F+KG   +  KT WV+HEY       H+
Sbjct: 129 FYKGRAPRGLKTKWVMHEYRLENDHSHR 156

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 1   QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDN---CG--KEVIGV 55
           + AT  ++EWYFFS   +KY N  R +R    G WK TG D+ I  +   CG  +E +GV
Sbjct: 81  EKATIGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGV 140

Query: 56  KKNLVFHKGHGSKAKKTSWVIHEYHSSKAS 85
           KK LVF++G   K  KT+W++HEY  + AS
Sbjct: 141 KKALVFYRGKPPKGLKTNWIMHEYRLTDAS 170

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 50/74 (67%)

Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           ++EWYFFS   +KY    R +R T+ G WK TG DR+I+ +    ++G+KK LVF+KG  
Sbjct: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRA 129

Query: 67  SKAKKTSWVIHEYH 80
            K +K++WV+HEY 
Sbjct: 130 PKGEKSNWVMHEYR 143

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|A8MQY1|NAC68_ARATH NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKE-VIGVKKNLVFHKG 64
           +D EWYFFS ++    N  ++ RTT  G WK TG DR+I D  G   VIG+KK LV+H+G
Sbjct: 60  EDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEG 119

Query: 65  HGSKAKKTSWVIHEYH 80
                 +T WV+HEYH
Sbjct: 120 KSPHGVRTPWVMHEYH 135

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
147843196	1537	hypothetical protein VITISV_005910 [Viti	0.910	0.059	0.521	2e-19
296089033	218	unnamed protein product [Vitis vinifera]	0.910	0.422	0.521	3e-19
296089035	994	unnamed protein product [Vitis vinifera]	0.891	0.090	0.5	2e-18
359489481	997	PREDICTED: uncharacterized protein LOC10	0.910	0.092	0.5	4e-18
413953608	611	putative NAC domain transcription factor	0.920	0.152	0.442	1e-17
293333166	612	putative NAC domain transcription factor	0.920	0.151	0.442	1e-17
242091638	352	hypothetical protein SORBIDRAFT_10g00010	0.910	0.261	0.436	3e-17
356522462	497	PREDICTED: NAC domain-containing protein	0.752	0.152	0.552	7e-17
15237699	567	NAC domain-containing protein 78 [Arabid	0.801	0.142	0.481	9e-17
297806417	568	hypothetical protein ARALYDRAFT_908325 [	0.801	0.142	0.481	1e-16

>gi|147843196|emb|CAN80540.1| hypothetical protein VITISV_005910 [Vitis vinifera]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/92 (52%), Positives = 60/92 (65%)

Query: 6    DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
            DD EW+FFS L  KY+N  R +R T  G WK TG DR I+    KEVIG KK LVF++G 
Sbjct: 1204 DDPEWFFFSLLDYKYSNGSRSNRATNAGYWKPTGQDRDIFSGTNKEVIGTKKTLVFYRGR 1263

Query: 66   GSKAKKTSWVIHEYHSSKASIHQAISSVLYNL 97
            G  A +T+WVIHEYH++ AS+    + VL  L
Sbjct: 1264 GRGAIRTNWVIHEYHTNIASLPANRAYVLCRL 1295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089033|emb|CBI38736.3| unnamed protein product [Vitis vinifera]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 60/92 (65%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FFS L  KY+N  R +R T  G WK TG DR I+    KEVIG KK LVF++G 
Sbjct: 63  DDPEWFFFSLLDYKYSNGSRSNRATNAGYWKPTGQDRGIFSGTNKEVIGTKKTLVFYRGR 122

Query: 66  GSKAKKTSWVIHEYHSSKASIHQAISSVLYNL 97
           G  A +T+WVIHEYH++ AS+    + VL  L
Sbjct: 123 GRGAIRTNWVIHEYHTNIASLPANRAYVLCRL 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089035|emb|CBI38738.3| unnamed protein product [Vitis vinifera]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 58/92 (63%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FFS L  KY+N  R +R T  G WK TG DR I+    KEVIG KK LVF++G 
Sbjct: 736 DDPEWFFFSLLDYKYSNGSRSNRATSAGYWKPTGQDRDIFSGTNKEVIGTKKTLVFYRGR 795

Query: 66  GSKAKKTSWVIHEYHSSKASIHQAISSVLYNL 97
           G  A +T+WVIHEY ++ A +    + VL  L
Sbjct: 796 GRGAIRTNWVIHEYRANIAGLPANRAYVLCRL 827

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489481|ref|XP_002268822.2| PREDICTED: uncharacterized protein LOC100262652 [Vitis vinifera]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 58/92 (63%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FFS L  KY+N  R +R T  G WK TG DR I+    KEVIG KK LVF++G 
Sbjct: 68  DDPEWFFFSLLDYKYSNGSRSNRATSAGYWKPTGQDRDIFSGTNKEVIGTKKTLVFYRGR 127

Query: 66  GSKAKKTSWVIHEYHSSKASIHQAISSVLYNL 97
           G  A +T+WVIHEY ++ A +    + VL  L
Sbjct: 128 GRGAIRTNWVIHEYRANIAGLPANRAYVLCRL 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413953608|gb|AFW86257.1| putative NAC domain transcription factor superfamily protein [Zea mays]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FF+ L +KY    R +R+T  G WK TG DR I       +IGVKK LVFH+G 
Sbjct: 66  DDPEWFFFAPLDRKYPGGHRSNRSTAAGYWKATGKDRLIRSRPAGTLIGVKKTLVFHRGR 125

Query: 66  GSKAKKTSWVIHEYHSSKASIHQAI--SSVLYNLF 98
             +  +T+W++HEY +++  + Q    S VLY LF
Sbjct: 126 APRGHRTAWIMHEYRTAEPQLPQGQNGSFVLYRLF 160

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293333166|ref|NP_001169690.1| putative NAC domain transcription factor superfamily protein [Zea mays] gi|224030913|gb|ACN34532.1| unknown [Zea mays] gi|413953607|gb|AFW86256.1| putative NAC domain transcription factor superfamily protein [Zea mays]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FF+ L +KY    R +R+T  G WK TG DR I       +IGVKK LVFH+G 
Sbjct: 66  DDPEWFFFAPLDRKYPGGHRSNRSTAAGYWKATGKDRLIRSRPAGTLIGVKKTLVFHRGR 125

Query: 66  GSKAKKTSWVIHEYHSSKASIHQAI--SSVLYNLF 98
             +  +T+W++HEY +++  + Q    S VLY LF
Sbjct: 126 APRGHRTAWIMHEYRTAEPQLPQGQNGSFVLYRLF 160

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242091638|ref|XP_002436309.1| hypothetical protein SORBIDRAFT_10g000101 [Sorghum bicolor] gi|241914532|gb|EER87676.1| hypothetical protein SORBIDRAFT_10g000101 [Sorghum bicolor]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           D EW+FF+ L +KY    R +R+T  G WK TG DR I       +IGVKK LVFH+G  
Sbjct: 86  DPEWFFFAPLDRKYPGGHRSNRSTAAGYWKATGKDRLIRSRRAGTLIGVKKTLVFHRGRA 145

Query: 67  SKAKKTSWVIHEYHSSKASIHQAI--SSVLYNLF 98
            +  +T+W++HEY +++  + Q    S VLY LF
Sbjct: 146 PRGHRTAWIMHEYRTAEPQLQQGQNGSFVLYRLF 179

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 50/76 (65%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
           DD EW+FFS +  KY  S R +RTTK G WK TG DR +       VIG KK LVFH+G 
Sbjct: 66  DDPEWFFFSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVFHEGR 125

Query: 66  GSKAKKTSWVIHEYHS 81
           G +  KT+WVIHEYH+
Sbjct: 126 GPRGVKTNWVIHEYHA 141

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237699|ref|NP_196061.1| NAC domain-containing protein 78 [Arabidopsis thaliana] gi|51316421|sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 gi|7406445|emb|CAB85547.1| putative protein [Arabidopsis thaliana] gi|20466286|gb|AAM20460.1| putative protein [Arabidopsis thaliana] gi|22136362|gb|AAM91259.1| putative protein [Arabidopsis thaliana] gi|332003356|gb|AED90739.1| NAC domain-containing protein 78 [Arabidopsis thaliana]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           D EWYFFS L KKY+N  + +R T+ G WK TG DR+I +  G  V+G+KK LV+HKG  
Sbjct: 64  DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRA 121

Query: 67  SKAKKTSWVIHEYHSSKASIHQA 89
            + ++T+WV+HEY  S   + +A
Sbjct: 122 PRGERTNWVMHEYRLSDEDLKKA 144

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806417|ref|XP_002871092.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata] gi|297316929|gb|EFH47351.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           D EWYFFS L KKY+N  + +R T+ G WK TG DR+I +  G  V+G+KK LV+HKG  
Sbjct: 64  DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRA 121

Query: 67  SKAKKTSWVIHEYHSSKASIHQA 89
            + ++T+WV+HEY  S   + +A
Sbjct: 122 PRGERTNWVMHEYRLSDEDLKKA 144

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.881	0.162	0.453	6e-18
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.801	0.142	0.481	8.3e-18
TAIR|locus:2083656	310	CUC1 "CUP-SHAPED COTYLEDON1" [	0.910	0.296	0.430	8.6e-17
TAIR|locus:1009023241	279	AT3G12977 [Arabidopsis thalian	0.900	0.326	0.408	1.4e-16
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.772	0.246	0.455	1.6e-16
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.782	0.240	0.451	2.8e-16
TAIR|locus:2087037	318	NAC3 "NAC domain containing pr	0.702	0.223	0.493	2.9e-16
TAIR|locus:2163153	336	NAC100 "NAC domain containing	0.782	0.235	0.451	3.1e-16
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.762	0.184	0.467	3.5e-16
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.702	0.249	0.479	6e-16

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 6.0e-18, P = 6.0e-18
 Identities = 44/97 (45%), Positives = 62/97 (63%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             D EWYFFS L KKY N  + +R T++G WK TG DR+I +  G +V+G+KK LV+HKG  
Sbjct:    64 DLEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILN--GSKVVGMKKTLVYHKGRA 121

Query:    67 SKAKKTSWVIHEYHS-----SKASIHQAISSVLYNLF 98
              + ++T+WV+HEY        K  +HQ  + VL  +F
Sbjct:   122 PRGERTNWVMHEYRLVDQDLDKTGVHQD-AFVLCRIF 157

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 8.3e-18, P = 8.3e-18
 Identities = 40/83 (48%), Positives = 56/83 (67%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             D EWYFFS L KKY+N  + +R T+ G WK TG DR+I +  G  V+G+KK LV+HKG  
Sbjct:    64 DLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRA 121

Query:    67 SKAKKTSWVIHEYHSSKASIHQA 89
              + ++T+WV+HEY  S   + +A
Sbjct:   122 PRGERTNWVMHEYRLSDEDLKKA 144

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2083656 CUC1 "CUP-SHAPED COTYLEDON1" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 40/93 (43%), Positives = 56/93 (60%)

Query:     1 QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLV 60
             + A   ++EWYFF+   +KY    R +R T+ G WK TG DR+I  +  K ++G+KK LV
Sbjct:    67 EKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLV 126

Query:    61 FHKGHGSKAKKTSWVIHEYH-SSKASIHQAISS 92
             F+KG   K +K+ WV+HEY    K S H   SS
Sbjct:   127 FYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSS 159

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0048467 "gynoecium development" evidence=IGI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0010072 "primary shoot apical meristem specification" evidence=TAS

GO:0048527 "lateral root development" evidence=TAS

GO:0051782 "negative regulation of cell division" evidence=IMP

GO:0010223 "secondary shoot formation" evidence=IMP

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0009790 "embryo development" evidence=IGI

GO:0009908 "flower development" evidence=IGI;IMP

GO:0010014 "meristem initiation" evidence=IGI;IMP

GO:0010160 "formation of organ boundary" evidence=IGI

TAIR|locus:1009023241 AT3G12977 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 38/93 (40%), Positives = 56/93 (60%)

Query:     1 QAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLV 60
             Q A    +EWYF+S+  +KYA   R +R T  G WK TG DR I  N G  ++G++K LV
Sbjct:    65 QTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGG--LVGMRKTLV 122

Query:    61 FHKGHGSKAKKTSWVIHEYHSSKASIHQAISSV 93
             F++G   K +KT WV+HE+      +H + +S+
Sbjct:   123 FYRGRSPKGRKTDWVMHEFRLQGKLLHHSPNSL 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 36/79 (45%), Positives = 53/79 (67%)

Query:     8 EEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGS 67
             +EWYFFS   +KY    R +R T  G WK TG D++I+++   E++G+KK LVF++G   
Sbjct:    70 KEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAP 129

Query:    68 KAKKTSWVIHEYH-SSKAS 85
             + +KT WV+HEY   SK+S
Sbjct:   130 RGEKTCWVMHEYRLHSKSS 148

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 37/82 (45%), Positives = 53/82 (64%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             ++EWYFF    +KY    R +R T+ G WK TG D++I+   GK ++G+KK LVF++G  
Sbjct:    70 EKEWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFR--GKSLVGMKKTLVFYRGRA 127

Query:    67 SKAKKTSWVIHEYH-SSKASIH 87
              K +KT+WV+HEY    K S H
Sbjct:   128 PKGQKTNWVMHEYRLDGKLSAH 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2087037 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 36/73 (49%), Positives = 49/73 (67%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             ++EWYFF    +KY    R +R TK G WK TG D++I+   GK ++G+KK LVF+KG  
Sbjct:    77 EKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFK--GKSLVGMKKTLVFYKGRA 134

Query:    67 SKAKKTSWVIHEY 79
              K  KT+WV+HEY
Sbjct:   135 PKGVKTNWVMHEY 147

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IMP

TAIR|locus:2163153 NAC100 "NAC domain containing protein 100" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 37/82 (45%), Positives = 53/82 (64%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             ++EWYFF    +KY    R +R T+ G WK TG D++I+   GK ++G+KK LVF++G  
Sbjct:    69 EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR--GKSLVGMKKTLVFYRGRA 126

Query:    67 SKAKKTSWVIHEYH-SSKASIH 87
              K +KT+WV+HEY    K S H
Sbjct:   127 PKGQKTNWVMHEYRLEGKFSAH 148

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query:     3 ATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFH 62
             A   ++EWYF+    +KY NS R +R T  G WK TG DR I+ + G + IG+KK+LVF+
Sbjct:    65 AMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY 124

Query:    63 KGHGSKAKKTSWVIHEY 79
             KG  +K  KT W++HE+
Sbjct:   125 KGRAAKGVKTDWMMHEF 141

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 35/73 (47%), Positives = 49/73 (67%)

Query:     7 DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
             ++EWYFF    +KY    R +R T+ G WK TG D++I+   GK ++G+KK LVF+KG  
Sbjct:    73 EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFK--GKSLVGMKKTLVFYKGRA 130

Query:    67 SKAKKTSWVIHEY 79
              K  KT+WV+HEY
Sbjct:   131 PKGVKTNWVMHEY 143

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026201001 SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (177 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	101
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-31

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  107 bits (270), Expect = 1e-31
 Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 6   DDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGH 65
            D EWYFFS   +KY N  R +R T  G WK TG D+ +    G+ V+G+KK LVF+KG 
Sbjct: 55  GDREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGE-VVGMKKTLVFYKGR 113

Query: 66  GSKAKKTSWVIHEYH 80
             K +KT WV+HEY 
Sbjct: 114 APKGEKTDWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.94

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.94  E-value=9.6e-27  Score=155.42  Aligned_cols=78  Identities=51%  Similarity=0.883  Sum_probs=59.4

Q ss_pred             CCCCCeEEEEEeccccccCCCcceeeccccEEEEcCcceeEEcCCCCeEEEEEEEeEeeeCCCCCCCccCeEEEEEEeC
Q 035726            4 TPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSS   82 (101)
Q Consensus         4 ~~~~~~wYFFs~~~~k~~~g~r~~R~~~~G~Wk~~g~~~~I~~~~~g~~vG~kk~l~f~~g~~~~~~kT~W~M~EY~l~   82 (101)
                      ..++++||||++++.++.++.|.+|++++|+||.+|+.++|.+. ++.+||.|++|+||.++.+++.+|+|+||||+|.
T Consensus        52 ~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   52 KGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             SS-SSEEEEEEE----------S-EEETTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cCCCceEEEEEecccccCCcccccccccceEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            35678999999999999999999999999999999999999985 8889999999999999889999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-13
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-13
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-12

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           ++EWYFFS   +KY N  R +R    G WK TG D+ I  +   + +G+KK LVF+ G  
Sbjct: 73  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVFYIGKA 130
Query: 67  SKAKKTSWVIHEYHSSKAS 85
            K  KT+W++HEY   + S
Sbjct: 131 PKGTKTNWIMHEYRLIEPS 149

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 7   DEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHG 66
           ++EWYFFS   +KY N  R +R    G WK TG D+ I  +   + +G+KK LVF+ G  
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVFYIGKA 127
Query: 67  SKAKKTSWVIHEYHSSKAS 85
            K  KT+W++HEY   + S
Sbjct: 128 PKGTKTNWIMHEYRLIEPS 146

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 9   EWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSK 68
           EWYFF+   +KY N  R +R    G WK TG D+ +        +G+KK LVF+ G   +
Sbjct: 70  EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAPR 127
Query: 69  AKKTSWVIHEYH 80
             KT W++HEY 
Sbjct: 128 GVKTDWIMHEYR 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	7e-32
1ut7_A	171	No apical meristem protein; transcription regulati	2e-31

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  108 bits (273), Expect = 7e-32
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 3   ATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFH 62
           A     EWYFF+   +KY N  R +R    G WK TG D+ +        +G+KK LVF+
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPV--APRGRTLGIKKALVFY 121

Query: 63  KGHGSKAKKTSWVIHEYHSSKASIHQAISS 92
            G   +  KT W++HEY  + A    A + 
Sbjct: 122 AGKAPRGVKTDWIMHEYRLADAGRAAAGAK 151

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  107 bits (270), Expect = 2e-31
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 2   AATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVF 61
            A   ++EWYFFS   +KY N  R +R    G WK TG D+ I  +   + +G+KK LVF
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVF 122

Query: 62  HKGHGSKAKKTSWVIHEYHSSKASIHQAISS----VLYNLF 98
           + G   K  KT+W++HEY   + S     +     VL  ++
Sbjct: 123 YIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=7.3e-38  Score=218.63  Aligned_cols=95  Identities=36%  Similarity=0.665  Sum_probs=80.6

Q ss_pred             CCCCCCeEEEEEeccccccCCCcceeeccccEEEEcCcceeEEcCCCCeEEEEEEEeEeeeCCCCCCCccCeEEEEEEeC
Q 035726            3 ATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSS   82 (101)
Q Consensus         3 a~~~~~~wYFFs~~~~k~~~g~r~~R~~~~G~Wk~~g~~~~I~~~~~g~~vG~kk~l~f~~g~~~~~~kT~W~M~EY~l~   82 (101)
                      +..++++|||||++.+++++|.|++|+|++||||++|++++|.+  +|.+||+||+|+||.|++|++.+|+|+||||+|.
T Consensus        64 ~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG~dk~I~~--~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~  141 (174)
T 3ulx_A           64 ALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLA  141 (174)
T ss_dssp             CSSCSSEEEEEEECCC-----CCSCEEETTEEEEECSCCEEECC--SSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEEC
T ss_pred             hccCCceEEEEeccccccCCCCCceeecCCceEccCCCCcEEee--CCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeC
Confidence            34578899999999999999999999999999999999999986  5789999999999999999999999999999998


Q ss_pred             CCCCC---------CCCCeEEEEEEE
Q 035726           83 KASIH---------QAISSVLYNLFF   99 (101)
Q Consensus        83 ~~~~~---------~~~~~VlCki~~   99 (101)
                      .+...         ..++|||||||.
T Consensus       142 ~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A          142 DAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             SCC-----------CCSSEEEEEEEE
T ss_pred             CCCCcccccccCCCCCCCEEEEEEEE
Confidence            86432         357999999996

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.8e-37  Score=216.16  Aligned_cols=95  Identities=37%  Similarity=0.648  Sum_probs=78.5

Q ss_pred             CCCCCeEEEEEeccccccCCCcceeeccccEEEEcCcceeEEcCCCCeEEEEEEEeEeeeCCCCCCCccCeEEEEEEeCC
Q 035726            4 TPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSK   83 (101)
Q Consensus         4 ~~~~~~wYFFs~~~~k~~~g~r~~R~~~~G~Wk~~g~~~~I~~~~~g~~vG~kk~l~f~~g~~~~~~kT~W~M~EY~l~~   83 (101)
                      ..++++|||||++.+++++|.|.+|+|++|+||++|++++|..  ++.+||+|++|+||.++.|++.+|+|+||||+|..
T Consensus        67 ~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG~~k~I~~--~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~  144 (171)
T 1ut7_A           67 LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE  144 (171)
T ss_dssp             SSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECC
T ss_pred             hcCCccEEEEeccccccCCCCcccccCCCCEEeccCCCceEEe--cCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCC
Confidence            4678999999999999999999999999999999999999997  56999999999999999999999999999999987


Q ss_pred             CCC----CCCCCeEEEEEEEE
Q 035726           84 ASI----HQAISSVLYNLFFF  100 (101)
Q Consensus        84 ~~~----~~~~~~VlCki~~~  100 (101)
                      .+.    ...++|||||||..
T Consensus       145 ~~~~~~~~~~~~~VlCrv~~k  165 (171)
T 1ut7_A          145 PSRRNGSTKLDDWVLCRIYKK  165 (171)
T ss_dssp             CC--------CCEEEEEEEEC
T ss_pred             CccccCcccCCCEEEEEEEEc
Confidence            642    24589999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	101
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	6e-21

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.7 bits (196), Expect = 6e-21
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 3   ATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFH 62
           A   ++EWYFFS   +KY N  R +R    G WK TG D+ I  +   + +G+KK LVF+
Sbjct: 66  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVFY 123

Query: 63  KGHGSKAKKTSWVIHEYH----SSKASIHQAISSVLYNLF 98
            G   K  KT+W++HEY     S +    +    VL  ++
Sbjct: 124 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.4e-34  Score=196.72  Aligned_cols=94  Identities=37%  Similarity=0.670  Sum_probs=77.1

Q ss_pred             CCCCCeEEEEEeccccccCCCcceeeccccEEEEcCcceeEEcCCCCeEEEEEEEeEeeeCCCCCCCccCeEEEEEEeCC
Q 035726            4 TPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNCGKEVIGVKKNLVFHKGHGSKAKKTSWVIHEYHSSK   83 (101)
Q Consensus         4 ~~~~~~wYFFs~~~~k~~~g~r~~R~~~~G~Wk~~g~~~~I~~~~~g~~vG~kk~l~f~~g~~~~~~kT~W~M~EY~l~~   83 (101)
                      ..++++|||||++.++++++.|.+|++++|+||++|+++.|.+  +|.+||+|++|+||+++.+++.+|+|+||||+|.+
T Consensus        67 ~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~  144 (166)
T d1ut7a_          67 LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE  144 (166)
T ss_dssp             SSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECC
T ss_pred             ccCcceEEEEeeeccccCCCCccccccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCC
Confidence            4578899999999999999999999999999999999998886  78899999999999999999999999999999987


Q ss_pred             CCCC----CCCCeEEEEEEE
Q 035726           84 ASIH----QAISSVLYNLFF   99 (101)
Q Consensus        84 ~~~~----~~~~~VlCki~~   99 (101)
                      ....    ..++|||||||.
T Consensus       145 ~~~~~~~~~~~~~VLCrI~~  164 (166)
T d1ut7a_         145 PSRRNGSTKLDDWVLCRIYK  164 (166)
T ss_dssp             CC--------CCEEEEEEEE
T ss_pred             cccccCccccCCEEEEEEEe
Confidence            6432    357899999996