Citrus Sinensis ID: 035770

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MTSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLYPTTDG
ccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEEEEEccccccccccccEEEEcccccccccccccccccccccEEEEccccccHHHHHHcccccccEEEEccccccccc
ccHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccEEEEEEccccEEEEEEcccHHHccccccccccccccccccccccccccEEEEEEEccccccccEEEEEEEEEcccccccEEEccEEEEEccccccccccccccccccccEEEEcccccccHHHHcccHcccEEEEEEcccccccc
MTSKQFICSIYIYVLTLTSKIngfrieltprtcidsalfpkdlspeEIHHRIAQLSRARAIhhrsnqepetlkppvypspfantniYITKISIGSTQFSTYLVVdtgsddtwlqckgctscfpinggsfpvkesktyrglacdhplcvpklcvikegsgtkgvlssesftfprdkntsltfanvtfgcgydnqnvsfgghmgsdniitgvfglgagqrsilrqlepetnlrfsyclrlypttdg
MTSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHrsnqepetlkppvypsPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTkgvlssesftfprdkntSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRqlepetnlrfsyclrlypttdg
MTSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLYPTTDG
****QFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDL****IHH*I************************YPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLY*****
*TSKQFICSIYIYVLTLTSKINGFRIELTPRTC**********************************************PFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSY***L******
MTSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLYPTTDG
*TSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLY*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTSKQFICSIYIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLCVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLYPTTDG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query244 2.2.26 [Sep-21-2011]
Q766C2 438 Aspartic proteinase nepen N/A no 0.782 0.436 0.311 7e-15
Q3EBM5 447 Probable aspartic proteas no no 0.901 0.492 0.277 9e-14
Q766C3 437 Aspartic proteinase nepen N/A no 0.790 0.441 0.303 9e-14
Q9LS40 500 Protein ASPARTIC PROTEASE no no 0.508 0.248 0.314 4e-12
Q9LHE3 470 Protein ASPARTIC PROTEASE no no 0.561 0.291 0.302 9e-10
Q6XBF8 437 Aspartic proteinase CDR1 no no 0.827 0.462 0.247 5e-09
Q9S9K4 475 Aspartic proteinase-like no no 0.610 0.313 0.290 5e-09
Q9LZL3 453 Aspartic proteinase PCS1 no no 0.5 0.269 0.300 3e-06
A2ZC67 410 Aspartic proteinase Asp1 N/A no 0.524 0.312 0.276 7e-06
Q0IU52 410 Aspartic proteinase Asp1 no no 0.524 0.312 0.288 0.0001
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function desciption
 Score = 80.9 bits (198), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 40/231 (17%)

Query: 23  GFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLS--RARAIHHRSNQEPETLKPPVYPSP 80
           G R++L     +DS    K+L+  E+  R  +    R R+I+    Q    ++ PVY   
Sbjct: 41  GLRVDLEQ---VDSG---KNLTKYELIKRAIKRGERRMRSINAML-QSSSGIETPVY--- 90

Query: 81  FANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGL 140
            A    Y+  ++IG+   S   ++DTGSD  W QC+ CT CF      F  ++S ++  L
Sbjct: 91  -AGDGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTL 149

Query: 141 ACDHPLC--VP-KLCVIKE---------GSGTKGVLSSESFTFPRDKNTSLTFANVTFGC 188
            C+   C  +P + C   E         GS T+G +++E+FTF        +  N+ FGC
Sbjct: 150 PCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETS-----SVPNIAFGC 204

Query: 189 GYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLY 239
           G DNQ   FG   G+     G+ G+G G  S+  QL      +FSYC+  Y
Sbjct: 205 GEDNQG--FGQGNGA-----GLIGMGWGPLSLPSQLGVG---QFSYCMTSY 245
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
224114179 449 predicted protein [Populus trichocarpa] 0.856 0.465 0.292 7e-22
449454654 434 PREDICTED: probable aspartic protease At 0.889 0.5 0.306 1e-20
449454652 435 PREDICTED: probable aspartic protease At 0.844 0.473 0.308 5e-20
449499012 435 PREDICTED: probable aspartic protease At 0.844 0.473 0.308 1e-19
356525748 436 PREDICTED: probable aspartic protease At 0.840 0.470 0.330 5e-19
356557014 435 PREDICTED: probable aspartic protease At 0.860 0.482 0.309 1e-18
357514989 416 Aspartic proteinase nepenthesin-1 [Medic 0.852 0.5 0.305 3e-18
242079447 441 hypothetical protein SORBIDRAFT_07g02278 0.819 0.453 0.321 1e-17
226503109 441 aspartic proteinase nepenthesin-2 precur 0.737 0.408 0.325 1e-16
302753526 398 hypothetical protein SELMODRAFT_75184 [S 0.622 0.381 0.366 2e-16
>gi|224114179|ref|XP_002332420.1| predicted protein [Populus trichocarpa] gi|222832373|gb|EEE70850.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 44/253 (17%)

Query: 18  TSKINGFRIELTPRTCIDSALFPKDLSPEE------------IHHRIAQLSRARAIHHRS 65
           T +++G  +EL  +    S L+P +L P E            +HH+ + +S  +A+ +R 
Sbjct: 8   TMQLDGLTMELIHKDSPQSPLYPGNLPPGEQILQPAACPFAGLHHQTSMMSTNKAVMNRM 67

Query: 66  NQEPETLKPPVYPSPFANTNIYITKISIGS-------TQFSTY-LVVDTGSDDTWLQCKG 117
              P T     Y  PF    +++ ++ +GS       T F TY   +DTG++ +W+QC+G
Sbjct: 68  -MSPLT----SYGDPF----LFLAQVGVGSFQEKSHRTHFKTYYFQIDTGNELSWIQCEG 118

Query: 118 CTS----CFPINGGSFPVKESKTYRGLACD-HPLCVPKLC---------VIKEGSGTKGV 163
           C +    CFP     +   +SK+Y+ ++C+ H  C P  C             GS T G 
Sbjct: 119 CQNKGNMCFPHKDPPYTSSQSKSYKPVSCNQHSFCEPNQCKEGLCAYNVTYGPGSYTSGN 178

Query: 164 LSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQ 223
           L++E+FTF  +        +++FGC  D++N+ +   +   N ++GV G+G G RS L Q
Sbjct: 179 LANETFTFYSNHGKHTALKSISFGCSTDSRNMIY-AFLLDKNPVSGVLGMGWGPRSFLAQ 237

Query: 224 LEPETNLRFSYCL 236
           L   ++ +FSYC+
Sbjct: 238 LGSISHGKFSYCI 250

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449454654|ref|XP_004145069.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449470632|ref|XP_004153020.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449499016|ref|XP_004160697.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454652|ref|XP_004145068.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449470630|ref|XP_004153019.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449499012|ref|XP_004160696.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356525748|ref|XP_003531485.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|356557014|ref|XP_003546813.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|357514989|ref|XP_003627783.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355521805|gb|AET02259.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|242079447|ref|XP_002444492.1| hypothetical protein SORBIDRAFT_07g022780 [Sorghum bicolor] gi|241940842|gb|EES13987.1| hypothetical protein SORBIDRAFT_07g022780 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|226503109|ref|NP_001147206.1| aspartic proteinase nepenthesin-2 precursor [Zea mays] gi|195608496|gb|ACG26078.1| aspartic proteinase nepenthesin-2 precursor [Zea mays] gi|413921850|gb|AFW61782.1| aspartic proteinase nepenthesin-2 [Zea mays] Back     alignment and taxonomy information
>gi|302753526|ref|XP_002960187.1| hypothetical protein SELMODRAFT_75184 [Selaginella moellendorffii] gi|300171126|gb|EFJ37726.1| hypothetical protein SELMODRAFT_75184 [Selaginella moellendorffii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
TAIR|locus:2206184 445 AT1G31450 [Arabidopsis thalian 0.942 0.516 0.285 5.7e-22
TAIR|locus:504955954 447 AT2G35615 [Arabidopsis thalian 0.946 0.516 0.279 2.8e-20
TAIR|locus:2062809 756 AT2G28220 [Arabidopsis thalian 0.622 0.201 0.314 3.2e-18
TAIR|locus:2010786 431 AT1G64830 [Arabidopsis thalian 0.893 0.505 0.302 1.8e-17
TAIR|locus:2046228 395 AT2G28040 [Arabidopsis thalian 0.684 0.422 0.305 2.1e-17
TAIR|locus:2056916 461 AT2G03200 [Arabidopsis thalian 0.692 0.366 0.316 2.9e-17
TAIR|locus:2095042 500 ASPG1 "ASPARTIC PROTEASE IN GU 0.631 0.308 0.320 3.6e-17
TAIR|locus:2035297 485 AT1G01300 [Arabidopsis thalian 0.561 0.282 0.335 1.2e-16
TAIR|locus:2145954 437 CDR1 "CONSTITUTIVE DISEASE RES 0.889 0.496 0.264 4e-16
TAIR|locus:2057831 396 AT2G28010 [Arabidopsis thalian 0.672 0.414 0.292 6.4e-16
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 260 (96.6 bits), Expect = 5.7e-22, P = 5.7e-22
 Identities = 76/266 (28%), Positives = 117/266 (43%)

Query:     1 MTSKQFI-CSI----YIYVLTLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQL 55
             M +K F+ CS+    + +    ++      +EL  R    S L+    +P   HH ++  
Sbjct:     1 MATKTFLYCSLLAISFFFASNSSANRENLTVELIHRDSPHSPLY----NP---HHTVSDR 53

Query:    56 SRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQC 115
               A  +   S     T K  +     +N   Y   ISIG+     + + DTGSD TW+QC
Sbjct:    54 LNAAFLRSISRSRRFTTKTDLQSGLISNGGEYFMSISIGTPPSKVFAIADTGSDLTWVQC 113

Query:   116 KGCTSCFPINGGSFPVKESKTYRGLACDHPLCVP------------KLCVIK----EGSG 159
             K C  C+  N   F  K+S TY+  +CD   C               +C  +    + S 
Sbjct:   114 KPCQQCYKQNSPLFDKKKSSTYKTESCDSKTCQALSEHEEGCDESKDICKYRYSYGDNSF 173

Query:   160 TKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRS 219
             TKG +++E+ +      +S++F    FGCGY+N     GG        +G+ GLG G  S
Sbjct:   174 TKGDVATETISIDSSSGSSVSFPGTVFGCGYNN-----GGTFEETG--SGIIGLGGGPLS 226

Query:   220 ILRQLEPETNLRFSYCL-RLYPTTDG 244
             ++ QL      +FSYCL     TT+G
Sbjct:   227 LVSQLGSSIGKKFSYCLSHTAATTNG 252
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062809 AT2G28220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046228 AT2G28040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057831 AT2G28010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
PLN03146 431 PLN03146, PLN03146, aspartyl protease family prote 7e-28
cd05476 265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 5e-23
cd05472 299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-19
cd05471 283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-18
cd05475 273 cd05475, nucellin_like, Nucellins, plant aspartic 7e-11
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 3e-07
pfam00026 316 pfam00026, Asp, Eukaryotic aspartyl protease 6e-04
cd06096 326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-04
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  109 bits (275), Expect = 7e-28
 Identities = 69/251 (27%), Positives = 103/251 (41%), Gaps = 35/251 (13%)

Query: 6   FICSIYIYVLTLT-SKINGFRIELTPRTCIDSALF-PKDLSPEEIH---HRIAQLSRARA 60
            +C      L+   +   GF ++L  R    S  + P +   + +     R    S +R 
Sbjct: 6   ALCLFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRR----SISRV 61

Query: 61  IHHRSNQ-EPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCT 119
            H R     P   +  +      N   Y+  ISIG+       + DTGSD  W QCK C 
Sbjct: 62  NHFRPTDASPNDPQSDLIS----NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCD 117

Query: 120 SCFPINGGSFPVKESKTYRGLACDHPLCV----------PKLCVIK----EGSGTKGVLS 165
            C+      F  K+S TY+ ++CD   C              C       +GS TKG L+
Sbjct: 118 DCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGNLA 177

Query: 166 SESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLE 225
            E+ T        ++F  + FGCG++N   +F      D   +G+ GLG G  S++ QL 
Sbjct: 178 VETLTIGSTSGRPVSFPGIVFGCGHNN-GGTF------DEKGSGIVGLGGGPLSLISQLG 230

Query: 226 PETNLRFSYCL 236
                +FSYCL
Sbjct: 231 SSIGGKFSYCL 241

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 244
PLN03146 431 aspartyl protease family protein; Provisional 100.0
KOG1339 398 consensus Aspartyl protease [Posttranslational mod 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
PTZ00165 482 aspartyl protease; Provisional 99.97
cd05478 317 pepsin_A Pepsin A, aspartic protease produced in g 99.96
cd05490 325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 99.96
cd06096 326 Plasmepsin_5 Plasmepsins are a class of aspartic p 99.96
cd05477 318 gastricsin Gastricsins, asparate proteases produce 99.95
cd05488 320 Proteinase_A_fungi Fungal Proteinase A , aspartic 99.95
cd06098 317 phytepsin Phytepsin, a plant homolog of mammalian 99.95
PTZ00147 453 plasmepsin-1; Provisional 99.95
cd05485 329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 99.94
cd05486 316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 99.94
cd06097 278 Aspergillopepsin_like Aspergillopepsin_like, aspar 99.94
cd05475 273 nucellin_like Nucellins, plant aspartic proteases 99.94
PTZ00013 450 plasmepsin 4 (PM4); Provisional 99.94
cd05487 326 renin_like Renin stimulates production of angioten 99.94
cd05472 299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 99.93
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.92
cd05471 283 pepsin_like Pepsin-like aspartic proteases, biloba 99.92
cd05489 362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 99.92
cd05473 364 beta_secretase_like Beta-secretase, aspartic-acid 99.9
cd05476 265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 99.9
PF00026 317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.87
cd05474 295 SAP_like SAPs, pepsin-like proteinases secreted fr 99.85
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.93
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.69
PF1365090 Asp_protease_2: Aspartyl protease 95.04
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 92.33
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 88.17
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6e-46  Score=345.64  Aligned_cols=214  Identities=30%  Similarity=0.552  Sum_probs=181.9

Q ss_pred             hhcccCcceEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccCCCCCCceEEEEEEecC
Q 035770           16 TLTSKINGFRIELTPRTCIDSALFPKDLSPEEIHHRIAQLSRARAIHHRSNQEPETLKPPVYPSPFANTNIYITKISIGS   95 (244)
Q Consensus        16 ~~~~~~~~~~l~L~hr~~~~s~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~pl~~~~~~~~~~Y~~~v~iGt   95 (244)
                      ...+...+++++|+||+++|+|++++..++.++++++++|+.+|.+++.++..   ...|+..+....+++|+++|.|||
T Consensus        17 ~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Y~v~i~iGT   93 (431)
T PLN03146         17 AAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA---SPNDPQSDLISNGGEYLMNISIGT   93 (431)
T ss_pred             hccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc---cCCccccCcccCCccEEEEEEcCC
Confidence            33456788999999999999999888888889999999999999999865422   123444443345789999999999


Q ss_pred             CCceeeEEEeCCCCceEEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCC----------ceee----eCCCCeEE
Q 035770           96 TQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVP----------KLCV----IKEGSGTK  161 (244)
Q Consensus        96 P~q~~~v~~DTGS~~~Wv~c~~c~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~----------~~c~----Y~~gs~~~  161 (244)
                      |||++.|++||||+++||+|.+|..|..|.++.|||++|+||+.++|.++.|+.          ..|.    |+||+.+.
T Consensus        94 Ppq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~Ygdgs~~~  173 (431)
T PLN03146         94 PPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTK  173 (431)
T ss_pred             CCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEEeCCCCcee
Confidence            999999999999999999999999999888999999999999999999999863          1254    56998889


Q ss_pred             EEEEEEEEEECCCCCCceeeccEEEEEEEecCCCccccCCCCCCCcceEEeeCCCCCchHHhhhcccCCceEEecCCC
Q 035770          162 GVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLY  239 (244)
Q Consensus       162 G~~~~D~l~~~~~~~~~~~~~~~~fGc~~~~~g~~f~~~~~~~~~~~GIlGLg~~~~S~~~ql~~~~~~~FSycL~~~  239 (244)
                      |.+++|+|+|++..+..+.++++.|||++.+.+ .|.      ...+||||||++++|+++||...+.++|||||++.
T Consensus       174 G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g-~f~------~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~  244 (431)
T PLN03146        174 GNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGG-TFD------EKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPL  244 (431)
T ss_pred             eEEEEEEEEeccCCCCcceeCCEEEeCCCCCCC-Ccc------CCCceeEecCCCCccHHHHhhHhhCCcEEEECCCC
Confidence            999999999988654445789999999998877 563      46899999999999999999877777999999864

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-28
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 9e-25
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 5e-22
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 6e-07
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-06
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 2e-06
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 3e-06
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 4e-06
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 6e-06
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 1e-05
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-05
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-05
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-05
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 4e-05
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 4e-05
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 5e-05
3cms_A 323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 7e-05
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 7e-05
1bxo_A 323 Protein (penicillopepsin); hydrolase, phosphonate 9e-05
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-04
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-04
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 1e-04
1izd_A 323 Aspartic proteinase; sugar binding, acid protease, 2e-04
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 3e-04
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 3e-04
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 4e-04
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 7e-04
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 7e-04
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 8e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  109 bits (273), Expect = 4e-28
 Identities = 32/199 (16%), Positives = 53/199 (26%), Gaps = 26/199 (13%)

Query: 65  SNQEPETLKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPI 124
             +    +  PV      +T ++   +   +      ++VD   +  W+ C+   S    
Sbjct: 3   PTKPINLVVLPVQNDG--STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTY 60

Query: 125 NGGSFPVKESKTYRGLACDHPLCVPKLCVIK-----------EGSGTKGVLSSESFTFP- 172
                   +        C       +    K                 G L  +      
Sbjct: 61  QAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHA 120

Query: 173 -----RDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPE 227
                +     +T     F C             G      GV GLG    S+  QL   
Sbjct: 121 TQGSTQQLGPLVTVPQFLFSCAPSF-----LVQKGLPRNTQGVAGLGHAPISLPNQLASH 175

Query: 228 TNL--RFSYCLRLYPTTDG 244
             L  +F+ CL  YPT+ G
Sbjct: 176 FGLQRQFTTCLSRYPTSKG 194
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 99.97
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 99.97
2x0b_A 383 Renin; hydrolase-hormone complex, hydrolase hormon 99.97
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 99.96
2apr_A 325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 99.96
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.96
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 99.96
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 99.96
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 99.96
1oew_A 329 Endothiapepsin; hydrolase, aspartic proteinase mec 99.96
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 99.96
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 99.96
4aa9_A 320 Chymosin; hydrolase, aspartic peptidase, rennet; H 99.96
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 99.96
3cms_A 323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 99.96
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 99.96
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 99.96
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 99.95
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 99.95
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 99.95
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 99.95
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 99.95
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 99.95
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 99.95
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 99.94
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 99.94
1izd_A 323 Aspartic proteinase; sugar binding, acid protease, 99.93
1bxo_A 323 Protein (penicillopepsin); hydrolase, phosphonate 99.93
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 99.93
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 99.92
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 99.92
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 99.92
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 99.92
3vf3_A 402 Beta-secretase 1; structure-based drug design, hyd 99.92
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.89
1lya_B 241 Cathepsin D; lysosomal aspartic protease; HET: NAG 98.31
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=99.97  E-value=3.6e-31  Score=240.68  Aligned_cols=148  Identities=20%  Similarity=0.244  Sum_probs=125.0

Q ss_pred             CCCCcccCCCCCCceEEEEEEecCCCceeeEEEeCCCCceEEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCce
Q 035770           72 LKPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKL  151 (244)
Q Consensus        72 ~~~pl~~~~~~~~~~Y~~~v~iGtP~q~~~v~~DTGS~~~Wv~c~~c~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~  151 (244)
                      ...||.+   +.|.+|+++|.||||||+|.|++||||+++||+|..|..|..+.++.|||++|+||+..+|      .+.
T Consensus        46 ~~~~l~n---~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~~------~~~  116 (370)
T 3psg_A           46 GDEPLEN---YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQ------ELS  116 (370)
T ss_dssp             CCCTTGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEE------EEE
T ss_pred             ceeccee---ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECCc------EEE
Confidence            4567765   5789999999999999999999999999999999999865556789999999999998874      478


Q ss_pred             eeeCCCCeEEEEEEEEEEEECCCCCCceeeccEEEEEEEecCCCccccCCCCCCCcceEEeeCCCCCc------hHHhhh
Q 035770          152 CVIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRS------ILRQLE  225 (244)
Q Consensus       152 c~Y~~gs~~~G~~~~D~l~~~~~~~~~~~~~~~~fGc~~~~~g~~f~~~~~~~~~~~GIlGLg~~~~S------~~~ql~  225 (244)
                      +.|++|+ +.|++++|+|+|++.     .++++.|||++...+..|.     ....|||||||++.++      +..+|.
T Consensus       117 i~Yg~Gs-~~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~-----~~~~dGIlGLg~~~~s~~~~~~~~~~l~  185 (370)
T 3psg_A          117 ITYGTGS-MTGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLY-----YAPFDGILGLAYPSISASGATPVFDNLW  185 (370)
T ss_dssp             EESSSCE-EEEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGG-----GCSCSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred             EEeCCce-EEEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccc-----cCCccceeccCCccccccCCCCHHHHHH
Confidence            8899998 599999999999987     8999999999988763453     3678999999998876      455666


Q ss_pred             cc---cCCceEEecCCC
Q 035770          226 PE---TNLRFSYCLRLY  239 (244)
Q Consensus       226 ~~---~~~~FSycL~~~  239 (244)
                      .+   ..++|||||.+.
T Consensus       186 ~qg~i~~~~FS~~L~~~  202 (370)
T 3psg_A          186 DQGLVSQDLFSVYLSSN  202 (370)
T ss_dssp             HTTCSSSSEEEEEEC--
T ss_pred             HCCCCCCCEEEEEEccC
Confidence            55   368999999986
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 244
d1t6ex_ 381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-18
d1dpja_ 329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 4e-14
d1qdma2 337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 4e-13
d2bjua1 329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 6e-13
d1mppa_ 357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 8e-13
g1lya.1 338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-12
d1am5a_ 324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-12
d1miqa_ 373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-12
g1htr.1 372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-11
d3cmsa_ 323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-11
d1oewa_ 330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 5e-11
d2apra_ 325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 5e-11
d2qp8a1 387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 7e-11
d1izea_ 323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-10
g1b5f.1 326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 3e-10
d1hrna_ 337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 8e-10
d1j71a_ 334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-09
d1eaga_ 342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-09
d1bxoa_ 323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-09
d1smra_ 335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 4e-09
d3psga_ 370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-08
d1wkra_ 340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 6e-08
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 82.0 bits (201), Expect = 1e-18
 Identities = 31/168 (18%), Positives = 45/168 (26%), Gaps = 17/168 (10%)

Query: 82  ANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLA 141
             T++Y      G++     LV+D      W  C G      I   S     +  Y    
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPG 65

Query: 142 CDHPLCVPKLCVIK---------EGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDN 192
           C  P C                  G+   G LS   F      + S   + V  G     
Sbjct: 66  CPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVA-NTTDGSKPVSKVNVGVLAAC 124

Query: 193 QNVSFGGHMGSDNIITGVFGLGAGQRSILRQLEPETNLRFSYCLRLYP 240
                          TGV GL     ++  Q+     +   + L L  
Sbjct: 125 APSKLL--ASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPT 170
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
d3psga_ 370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 99.96
g1htr.1 372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 99.95
d1am5a_ 324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 99.94
d1dpja_ 329 Acid protease {Baker's yeast (Saccharomyces cerevi 99.93
d2apra_ 325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 99.93
d1oewa_ 330 Endothiapepsin {Chestnut blight fungus (Endothia p 99.93
d1miqa_ 373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.92
d1mppa_ 357 Pepsin {Mucor pusillus [TaxId: 4840]} 99.91
d1smra_ 335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 99.91
g1lya.1 338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.9
d1qdma2 337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.9
d1j71a_ 334 Acid protease {Yeast (Candida tropicalis) [TaxId: 99.9
d2bjua1 329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.89
d3cmsa_ 323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.89
d1hrna_ 337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.89
d1eaga_ 342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.89
g1b5f.1 326 Plant acid proteinase, phytepsin {Cynara carduncul 99.88
d2qp8a1 387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.88
d1t6ex_ 381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.87
d1izea_ 323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.86
d1wkra_ 340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.86
d1bxoa_ 323 Acid protease {Fungus (Penicillium janthinellum), 99.85
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=3.1e-29  Score=224.87  Aligned_cols=150  Identities=20%  Similarity=0.246  Sum_probs=123.4

Q ss_pred             CCCcccCCCCCCceEEEEEEecCCCceeeEEEeCCCCceEEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCcee
Q 035770           73 KPPVYPSPFANTNIYITKISIGSTQFSTYLVVDTGSDDTWLQCKGCTSCFPINGGSFPVKESKTYRGLACDHPLCVPKLC  152 (244)
Q Consensus        73 ~~pl~~~~~~~~~~Y~~~v~iGtP~q~~~v~~DTGS~~~Wv~c~~c~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~c  152 (244)
                      ..||.+   +.|.+|+++|.||||||+|.|++||||+++||+|.+|..|..+.++.|||++|+||+...|      .+.+
T Consensus        47 ~~~l~n---~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~------~~~~  117 (370)
T d3psga_          47 DEPLEN---YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQ------ELSI  117 (370)
T ss_dssp             CCTTGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEE------EEEE
T ss_pred             cccccc---ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCCC------cEEE
Confidence            456665   4678999999999999999999999999999999999999888899999999999998874      3678


Q ss_pred             eeCCCCeEEEEEEEEEEEECCCCCCceeeccEEEEEEEecCCCccccCCCCCCCcceEEeeCCCCCc------hHHhhhc
Q 035770          153 VIKEGSGTKGVLSSESFTFPRDKNTSLTFANVTFGCGYDNQNVSFGGHMGSDNIITGVFGLGAGQRS------ILRQLEP  226 (244)
Q Consensus       153 ~Y~~gs~~~G~~~~D~l~~~~~~~~~~~~~~~~fGc~~~~~g~~f~~~~~~~~~~~GIlGLg~~~~S------~~~ql~~  226 (244)
                      .|++|+. .|.++.|++.+++.     .++++.|||+....+..+.     ....+||+|||++..+      +..++..
T Consensus       118 ~Yg~Gs~-~G~~~~d~~~~~~~-----~~~~~~f~~~~~~~~~~~~-----~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~  186 (370)
T d3psga_         118 TYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLY-----YAPFDGILGLAYPSISASGATPVFDNLWD  186 (370)
T ss_dssp             ESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGG-----GCSCSEEEECSCGGGCGGGCCCHHHHHHH
T ss_pred             EeCCceE-EEEEEEEEEeeece-----eeeeeEEEEEeeccCceec-----ccccccccccccCcccccCCCchhhhhhh
Confidence            8999975 89999999999987     8999999999988763332     3578999999988755      4555554


Q ss_pred             c---cCCceEEecCCCCCC
Q 035770          227 E---TNLRFSYCLRLYPTT  242 (244)
Q Consensus       227 ~---~~~~FSycL~~~~~~  242 (244)
                      +   -.+.|++|+.+...+
T Consensus       187 ~~~i~~~~fs~~l~~~~~~  205 (370)
T d3psga_         187 QGLVSQDLFSVYLSSNDDS  205 (370)
T ss_dssp             TTCSSSSEEEEEEC-----
T ss_pred             hcccccceeEEEeecCCCC
Confidence            4   368999999876544
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure